CSPI02G19710 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G19710
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 17759144 .. 17759341 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAATATTACGTTTTGGGGGCAGGAGGAATGTTGGAGAACGGAGAGAATGGCGGCCATGGAGCCTCGAATGTAGGCCGTGTCCAATGTCATCGCCACGTGGACGGCGTCGTCGGAGCACAGCTGGTGACTGTCTTCCTGGCCGATGAAGACCAAGGGACAATCCGGGGAGTTGTAGAATTGGGGGGCCTCCTTGAA

mRNA sequence

ATGGAATATTACGTTTTGGGGGCAGGAGGAATGTTGGAGAACGGAGAGAATGGCGGCCATGGAGCCTCGAATGTAGGCCGTGTCCAATGTCATCGCCACGTGGACGGCGTCGTCGGAGCACAGCTGGTGACTGTCTTCCTGGCCGATGAAGACCAAGGGACAATCCGGGGAGTTGTAGAATTGGGGGGCCTCCTTGAA

Coding sequence (CDS)

ATGGAATATTACGTTTTGGGGGCAGGAGGAATGTTGGAGAACGGAGAGAATGGCGGCCATGGAGCCTCGAATGTAGGCCGTGTCCAATGTCATCGCCACGTGGACGGCGTCGTCGGAGCACAGCTGGTGACTGTCTTCCTGGCCGATGAAGACCAAGGGACAATCCGGGGAGTTGTAGAATTGGGGGGCCTCCTTGAA
Homology
[Close]
BLAST of CSPI02G19710 vs. TrEMBL
Match: A0A151TI53_CAJCA (Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_013014 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.4e-09
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 5   VLGAGGMLENGENGGHGASNVGRVQCHRHVDGVVGAQLVTVFLADEDQGTIRGVVELGGL 64
           V GAGG+LE+GE+GGHGA  VG V+CH HVDGV+G +   V L  ++ G + GVVE G L
Sbjct: 221 VFGAGGVLEDGEDGGHGAPEVGGVECHGHVDGVLGTR---VALWLQNGGAVGGVVEFGCL 279

Query: 65  LE 67
           LE
Sbjct: 281 LE 279

[Close]
BLAST of CSPI02G19710 vs. NCBI nr
Match: gi|1012355522|gb|KYP66709.1| (hypothetical protein KK1_013014, partial [Cajanus cajan])

HSP 1 Score: 68.2 bits (165), Expect = 6.3e-09
Identity = 36/62 (58.06%), Postives = 45/62 (72.58%), Query Frame = 1 

Query: 5   VLGAGGMLENGENGGHGASNVGRVQCHRHVDGVVGAQLVTVFLADEDQGTIRGVVELGGL 64
           V GAGG+LE+GE+GGHGA  VG V+CH HVDGV+G +   V L  ++ G + GVVE G L
Sbjct: 221 VFGAGGVLEDGEDGGHGAPEVGGVECHGHVDGVLGTR---VALWLQNGGAVGGVVEFGCL 279

Query: 65  LE 67
           LE
Sbjct: 281 LE 279

The following BLAST results are available for this feature:
BLAST of CSPI02G19710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G19710 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151TI53_CAJCA4.4e-0958.06Uncharacterized protein (Fragment) OS=Cajanus cajan GN=KK1_013014 PE=4 SV=1[more]
BLAST of CSPI02G19710 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G19710 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1012355522|gb|KYP66709.1|6.3e-0958.06hypothetical protein KK1_013014, partial [Cajanus cajan][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19710.1CSPI02G19710.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G19710Wild cucumber (PI 183967)cpicpiB058
CSPI02G19710Wild cucumber (PI 183967)cpicpiB074
CSPI02G19710Wild cucumber (PI 183967)cpicpiB087
CSPI02G19710Cucumber (Gy14) v1cgycpiB118
CSPI02G19710Cucumber (Gy14) v1cgycpiB163
CSPI02G19710Cucumber (Gy14) v1cgycpiB341
CSPI02G19710Cucumber (Gy14) v1cgycpiB502
CSPI02G19710Cucurbita maxima (Rimu)cmacpiB011
CSPI02G19710Cucurbita maxima (Rimu)cmacpiB175
CSPI02G19710Cucurbita maxima (Rimu)cmacpiB662
CSPI02G19710Cucurbita maxima (Rimu)cmacpiB793
CSPI02G19710Cucurbita maxima (Rimu)cmacpiB868
CSPI02G19710Cucurbita moschata (Rifu)cmocpiB002
CSPI02G19710Cucurbita moschata (Rifu)cmocpiB160
CSPI02G19710Cucurbita moschata (Rifu)cmocpiB428
CSPI02G19710Cucurbita moschata (Rifu)cmocpiB782
CSPI02G19710Cucurbita moschata (Rifu)cmocpiB848
CSPI02G19710Cucumber (Chinese Long) v2cpicuB065
CSPI02G19710Cucumber (Chinese Long) v2cpicuB070
CSPI02G19710Cucumber (Chinese Long) v2cpicuB093
CSPI02G19710Melon (DHL92) v3.5.1cpimeB118
CSPI02G19710Melon (DHL92) v3.5.1cpimeB158
CSPI02G19710Watermelon (Charleston Gray)cpiwcgB124
CSPI02G19710Watermelon (Charleston Gray)cpiwcgB136
CSPI02G19710Watermelon (Charleston Gray)cpiwcgB144
CSPI02G19710Watermelon (Charleston Gray)cpiwcgB172
CSPI02G19710Watermelon (97103) v1cpiwmB116
CSPI02G19710Watermelon (97103) v1cpiwmB129
CSPI02G19710Watermelon (97103) v1cpiwmB153
CSPI02G19710Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G19710Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G19710Cucurbita pepo (Zucchini)cpecpiB773
CSPI02G19710Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G19710Bottle gourd (USVL1VR-Ls)cpilsiB104
CSPI02G19710Bottle gourd (USVL1VR-Ls)cpilsiB115
CSPI02G19710Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G19710Melon (DHL92) v3.6.1cpimedB114
CSPI02G19710Melon (DHL92) v3.6.1cpimedB142
CSPI02G19710Melon (DHL92) v3.6.1cpimedB150
CSPI02G19710Cucumber (Gy14) v2cgybcpiB057
CSPI02G19710Cucumber (Gy14) v2cgybcpiB101
CSPI02G19710Cucumber (Gy14) v2cgybcpiB261
CSPI02G19710Silver-seed gourdcarcpiB0115
CSPI02G19710Silver-seed gourdcarcpiB0209
CSPI02G19710Silver-seed gourdcarcpiB0438
CSPI02G19710Silver-seed gourdcarcpiB0839
CSPI02G19710Silver-seed gourdcarcpiB0983
CSPI02G19710Silver-seed gourdcarcpiB1012
CSPI02G19710Cucumber (Chinese Long) v3cpicucB081
CSPI02G19710Cucumber (Chinese Long) v3cpicucB089
CSPI02G19710Cucumber (Chinese Long) v3cpicucB103
CSPI02G19710Cucumber (Chinese Long) v3cpicucB114
CSPI02G19710Watermelon (97103) v2cpiwmbB103
CSPI02G19710Watermelon (97103) v2cpiwmbB137
CSPI02G19710Watermelon (97103) v2cpiwmbB166
CSPI02G19710Wax gourdcpiwgoB159
CSPI02G19710Wax gourdcpiwgoB187
CSPI02G19710Wax gourdcpiwgoB198