CSPI02G19640 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G19640
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 17741469 .. 17741618 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCGCTATCGCACGTGCCTATTCGATATTCCGGCGAGCCATCGATGGCGATGGCGCCGACCAACGTTTAG

mRNA sequence

ATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCGCTATCGCACGTGCCTATTCGATATTCCGGCGAGCCATCGATGGCGATGGCGCCGACCAACGTTTAG

Coding sequence (CDS)

ATGGGCCTTTACGAAAGCAACTTGTTTGGGCTCCGTCCATCAAAGTTCAACATTCCAGCACGTGGATATATTCTCCACCGGCCGCTATCGCACGTGCCTATTCGATATTCCGGCGAGCCATCGATGGCGATGGCGCCGACCAACGTTTAG
Homology
[Close]
BLAST of CSPI02G19640 vs. TrEMBL
Match: A0A0A0LP78_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360790 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.2e-20
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPSMAMAPTNV 50
          MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEP MAMAPTNV
Sbjct: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 49

[Close]
BLAST of CSPI02G19640 vs. NCBI nr
Match: gi|700207443|gb|KGN62562.1| (hypothetical protein Csa_2G360790 [Cucumis sativus])

HSP 1 Score: 104.8 bits (260), Expect = 4.6e-20
Identity = 48/49 (97.96%), Postives = 48/49 (97.96%), Query Frame = 1 

Query: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPSMAMAPTNV 50
          MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEP MAMAPTNV
Sbjct: 1  MGLYESNLFGLRPSKFNIPARGYILHRPLSHVPIRYSGEPPMAMAPTNV 49

The following BLAST results are available for this feature:
BLAST of CSPI02G19640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G19640 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP78_CUCSA3.2e-2097.96Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360790 PE=4 SV=1[more]
BLAST of CSPI02G19640 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G19640 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207443|gb|KGN62562.1|4.6e-2097.96hypothetical protein Csa_2G360790 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19640.1CSPI02G19640.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G19640Csa2G360790Cucumber (Chinese Long) v2cpicuB065
CSPI02G19640CsaV3_2G028340Cucumber (Chinese Long) v3cpicucB081
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G19640Cucumber (Gy14) v1cgycpiB118
CSPI02G19640Cucumber (Gy14) v1cgycpiB163
CSPI02G19640Cucumber (Gy14) v1cgycpiB341
CSPI02G19640Cucumber (Gy14) v1cgycpiB502
CSPI02G19640Cucurbita maxima (Rimu)cmacpiB011
CSPI02G19640Cucurbita maxima (Rimu)cmacpiB175
CSPI02G19640Cucurbita maxima (Rimu)cmacpiB662
CSPI02G19640Cucurbita maxima (Rimu)cmacpiB793
CSPI02G19640Cucurbita maxima (Rimu)cmacpiB868
CSPI02G19640Cucurbita moschata (Rifu)cmocpiB002
CSPI02G19640Cucurbita moschata (Rifu)cmocpiB160
CSPI02G19640Cucurbita moschata (Rifu)cmocpiB428
CSPI02G19640Cucurbita moschata (Rifu)cmocpiB782
CSPI02G19640Cucurbita moschata (Rifu)cmocpiB848
CSPI02G19640Cucumber (Chinese Long) v2cpicuB070
CSPI02G19640Cucumber (Chinese Long) v2cpicuB093
CSPI02G19640Melon (DHL92) v3.5.1cpimeB118
CSPI02G19640Melon (DHL92) v3.5.1cpimeB158
CSPI02G19640Watermelon (Charleston Gray)cpiwcgB124
CSPI02G19640Watermelon (Charleston Gray)cpiwcgB136
CSPI02G19640Watermelon (Charleston Gray)cpiwcgB144
CSPI02G19640Watermelon (Charleston Gray)cpiwcgB172
CSPI02G19640Watermelon (97103) v1cpiwmB116
CSPI02G19640Watermelon (97103) v1cpiwmB129
CSPI02G19640Watermelon (97103) v1cpiwmB153
CSPI02G19640Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G19640Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G19640Cucurbita pepo (Zucchini)cpecpiB773
CSPI02G19640Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G19640Bottle gourd (USVL1VR-Ls)cpilsiB104
CSPI02G19640Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G19640Melon (DHL92) v3.6.1cpimedB114
CSPI02G19640Melon (DHL92) v3.6.1cpimedB142
CSPI02G19640Melon (DHL92) v3.6.1cpimedB150
CSPI02G19640Cucumber (Gy14) v2cgybcpiB057
CSPI02G19640Cucumber (Gy14) v2cgybcpiB261
CSPI02G19640Cucumber (Gy14) v2cgybcpiB305
CSPI02G19640Silver-seed gourdcarcpiB0115
CSPI02G19640Silver-seed gourdcarcpiB0209
CSPI02G19640Silver-seed gourdcarcpiB0438
CSPI02G19640Silver-seed gourdcarcpiB0839
CSPI02G19640Silver-seed gourdcarcpiB1012
CSPI02G19640Cucumber (Chinese Long) v3cpicucB089
CSPI02G19640Cucumber (Chinese Long) v3cpicucB103
CSPI02G19640Cucumber (Chinese Long) v3cpicucB114
CSPI02G19640Watermelon (97103) v2cpiwmbB103
CSPI02G19640Watermelon (97103) v2cpiwmbB137
CSPI02G19640Watermelon (97103) v2cpiwmbB166
CSPI02G19640Wax gourdcpiwgoB159
CSPI02G19640Wax gourdcpiwgoB187
CSPI02G19640Wax gourdcpiwgoB198
CSPI02G19640Wild cucumber (PI 183967)cpicpiB058
CSPI02G19640Wild cucumber (PI 183967)cpicpiB074
CSPI02G19640Wild cucumber (PI 183967)cpicpiB087