CSPI02G19460 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G19460
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 17653453 .. 17653749 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCCACGCCAGGCTGGAAAGGAATCTCACGTGAATCGAGTTGAATCTCTTTGACCTTTCGAGCCTATCCAACAGACTACAAATCTCCACTTCCCACTCCCTTACAGTGTGGCGTAAAACTTACATGCCTCAAAGTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA

mRNA sequence

ATGGACCCACGCCAGGCTGGAAAGGAATCTCACTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA

Coding sequence (CDS)

ATGGACCCACGCCAGGCTGGAAAGGAATCTCACTTTGCTCATTTCAAAGATCGTGCCATTCACGCTCTTAGGGATGGCACGTGTGCAATTTCTTCCGTTTGTAATTTGGACGGACCTGATTACATCAACGGAGCAACCGTGGCAGTACTCGCAGTCCACTGGAGCGTGATTCGAGTTTCGCGAGGCAGTTGA
Homology
[Close]
BLAST of CSPI02G19460 vs. TrEMBL
Match: A0A0A0LNI0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360610 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 4.8e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAISSVCNLDGPDYINGATVAVLAVHWSVIRVS 60
          MDPRQAGKESHFAHFKDRAIHALRDGTCA+SSVCNLDGPDYINGATVAVLAVHWSVIRVS
Sbjct: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAVSSVCNLDGPDYINGATVAVLAVHWSVIRVS 60

Query: 61 RGS 64
          RGS
Sbjct: 61 RGS 63

[Close]
BLAST of CSPI02G19460 vs. NCBI nr
Match: gi|700207425|gb|KGN62544.1| (hypothetical protein Csa_2G360610 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 6.9e-29
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 1 

Query: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAISSVCNLDGPDYINGATVAVLAVHWSVIRVS 60
          MDPRQAGKESHFAHFKDRAIHALRDGTCA+SSVCNLDGPDYINGATVAVLAVHWSVIRVS
Sbjct: 1  MDPRQAGKESHFAHFKDRAIHALRDGTCAVSSVCNLDGPDYINGATVAVLAVHWSVIRVS 60

Query: 61 RGS 64
          RGS
Sbjct: 61 RGS 63

The following BLAST results are available for this feature:
BLAST of CSPI02G19460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G19460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNI0_CUCSA4.8e-2998.41Uncharacterized protein OS=Cucumis sativus GN=Csa_2G360610 PE=4 SV=1[more]
BLAST of CSPI02G19460 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G19460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700207425|gb|KGN62544.1|6.9e-2998.41hypothetical protein Csa_2G360610 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G19460.1CSPI02G19460.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G19460Csa2G360610Cucumber (Chinese Long) v2cpicuB065
CSPI02G19460CsaV3_2G028160Cucumber (Chinese Long) v3cpicucB081
CSPI02G19460CsGy2G019330Cucumber (Gy14) v2cgybcpiB057
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G19460Cucurbita pepo (Zucchini)cpecpiB092
CSPI02G19460Cucurbita pepo (Zucchini)cpecpiB541
CSPI02G19460Cucurbita pepo (Zucchini)cpecpiB773
CSPI02G19460Cucurbita pepo (Zucchini)cpecpiB820
CSPI02G19460Bottle gourd (USVL1VR-Ls)cpilsiB114
CSPI02G19460Bottle gourd (USVL1VR-Ls)cpilsiB141
CSPI02G19460Melon (DHL92) v3.6.1cpimedB114
CSPI02G19460Melon (DHL92) v3.6.1cpimedB142
CSPI02G19460Cucumber (Gy14) v2cgybcpiB163
CSPI02G19460Cucumber (Gy14) v2cgybcpiB305
CSPI02G19460Silver-seed gourdcarcpiB0115
CSPI02G19460Silver-seed gourdcarcpiB0209
CSPI02G19460Silver-seed gourdcarcpiB0303
CSPI02G19460Silver-seed gourdcarcpiB0806
CSPI02G19460Cucumber (Chinese Long) v3cpicucB103
CSPI02G19460Watermelon (97103) v2cpiwmbB137
CSPI02G19460Watermelon (97103) v2cpiwmbB166
CSPI02G19460Wax gourdcpiwgoB159
CSPI02G19460Wax gourdcpiwgoB198
CSPI02G19460Wild cucumber (PI 183967)cpicpiB074
CSPI02G19460Wild cucumber (PI 183967)cpicpiB091
CSPI02G19460Cucumber (Gy14) v1cgycpiB163
CSPI02G19460Cucumber (Gy14) v1cgycpiB341
CSPI02G19460Cucurbita maxima (Rimu)cmacpiB011
CSPI02G19460Cucurbita maxima (Rimu)cmacpiB175
CSPI02G19460Cucurbita maxima (Rimu)cmacpiB439
CSPI02G19460Cucurbita maxima (Rimu)cmacpiB513
CSPI02G19460Cucurbita maxima (Rimu)cmacpiB793
CSPI02G19460Cucurbita moschata (Rifu)cmocpiB002
CSPI02G19460Cucurbita moschata (Rifu)cmocpiB160
CSPI02G19460Cucurbita moschata (Rifu)cmocpiB428
CSPI02G19460Cucurbita moschata (Rifu)cmocpiB782
CSPI02G19460Cucumber (Chinese Long) v2cpicuB080
CSPI02G19460Cucumber (Chinese Long) v2cpicuB096
CSPI02G19460Melon (DHL92) v3.5.1cpimeB118
CSPI02G19460Melon (DHL92) v3.5.1cpimeB148
CSPI02G19460Watermelon (Charleston Gray)cpiwcgB136
CSPI02G19460Watermelon (Charleston Gray)cpiwcgB144
CSPI02G19460Watermelon (Charleston Gray)cpiwcgB172
CSPI02G19460Watermelon (97103) v1cpiwmB116
CSPI02G19460Watermelon (97103) v1cpiwmB129
CSPI02G19460Watermelon (97103) v1cpiwmB153