CSPI02G16410 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G16410
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Histone deacetylation protein Rxt3
Location	Chr2 : 15809299 .. 15812586 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTTACCCTATATAGTTTCACAATGTTTGTATTAAATGTTCCATTTACAATAATCTCCAGGATTAAATACAGTATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCACGGTTGAAGAAGGGAGAAGTTTTATATCTAGAAACACATTCGTGCAGGTATGTTAAGTCCCACCCCTGATGTTTTTCTTATCTCTGGCTCTCATAAACAAACTTTAGTTTCAAGCATGTCACTATTAGTCATTTAGTCATAATCTGTCATACGTGAGTTTAATCTTTAGAATTAATGATCAGTGACATACTTTATTTGTGAGAAAATAAATGACCTAAAAGGAATTATAACTCTATGAAGCTTGAATTGCCATTAAACTTACACGTTGGAAGGATAACATCCACGCATATGGATTGTGGCAGTAAGTCACCATCCAATATTGGTAGTTCTAAATTCTAATATTTTCAAATGTTAAATTAATGCCGTGCCGGCAGTAGAATAATATTTTTAGTGAAAAGAGTTTATTTTTGGGAATGGATTTTATCTATATATAATAAATACAAGAAAATATATTGTCTGTACCAGTACATGACACAAAAGATCGATATACATTTAGATTCTCACATGACAATCTTAGTTTTGACCAATATACATCTTCGTTAAAGGAGGGATTTTGGTTTGAACTAATTCTAGGTAGGCAGGTCAGCATGTTCAAAAACTTGCCCATTGAGATTCTCGATAGCCCTAAAGGTTTCTATTCAAACCACCACTTCTTTTATAAGAATTGATACTTCATCTTGTAAATTGATTATTGCATTAGAGAGGCTTTCAGTTAGGAAAACAGGTGTTATTACAAAAATCTCAATAGCCCTTTGGTACAATAATATAACCTATGCTAGAAGAGAAAGAAAGCAGTAAGGGACAATGTAAAATGAGGATGTGTGGGTGGAGTTGGTGTTTAAATACCAAAGCAAAGAGTAGCGTACAAGCAGCGTGAGTAAAAAGTGTGTTTGAGTATTAGTCGTATGTTAGGATTCTCTGCTGCATACTATTAGTTAGTTACGATGGAACCTCTAAATAATAATGTGATAAGTGGTGAGAATTTAATGAGTTAAAAATAAATGCGGAACAAACTAAATTATATCTCAAATTCTCACAGCCAAATGAGCAATCCATCATAAAATTGTAAATAATAAAGTGTAGGGAAAAAAGGAGAATGACACCGAACATATAATGGTTCGCTCCAAACTTAGGATTACGTCCTGTCTTCTGCAACAGCAGGTTCTACTATGATGGAGATTGAAAAGAACAATCACACATGCTTACAAATCTCTCTTTCCAAATAGCCCAACAAAAGCTATTTGAGTCCAGGACTACAACTCGGTATCTTGGAATAAAATAAGAGACCTTCAAAAAAGTAGAAAAGTATACACTGTATTTTGCTTAGCAATGCTCACTGCCACTCTCAATAAAATGATGAAACAACTCTCGACTTTTCTTTAGAGGTTCGCACTTCACTTCGATTTTCTTTCTAGTATCAGCCTTTTATAAACAAAGGCCATTGCCACTTTTTATTTCAATTAAGCTCCACCACCACAATTAACCAATAAAAGGCATTTACGCTCACCTCCCATATAATCCAATTAAAATAGTTGCTTAATTAGAAAGAAAATTAAATGGGTCTTGTGAAGGAGTTTTCGGCTCCAATCCTAACAGGAAGGACCTGGGGTTACTTTGGTTTTAGGTTACTTGTGTAGAGGTAGTGGTTCCTGGACCTTCCTGAAAGGAGGCTGAAGGCAATCTATCTCCTTTGCATGCTCTCTTGTTATGTTGTTATTTTTCCTTCGCCAATATATACTGGTTGAGTTTTGAAGTTAAAAAGGCTTGATATCAAGGAAAATGAGCAGAAAGGAAGTTCTTCCAATTAGAGTACTTCCTTTTTAATATCATTGGTACACATTGGAGGGTTATCATATTAGAATATCTGGCTGCAAGACCCGTCCAATAGAATTATTCCAATTAGAGTACTTAGTTTTATTGGTACCCATTGCATGGCCTGGTGTGCGCGTATGAACTACATTTTGGAGAATTGATTTGACTGAATTGCCACATCCGTGAAATCATATGCTAGTAATAATTTGACTAAAAAACTACTGTTTGAAGGTATGAACTCTGCTTTTCCGGAGAGAAGATGGTGAAAACCATAGCATCATCTCAAGGGCATGAAACTGAAGCCGAGAAATCTCAGAATCACTTTCTAAACTGCCCAAATGGTGAAAGAACTGATAACGATAATACTTTGATTGATGTGTTTCGATGGTCTCGCTGTAAGAAGCCATTGCCTCAGAAGGTTATGCGTTCTATTGGTATCCCACTGCCTTCTGAACACGTAGAGGTACTTTTCTCCAGCTTTCTTTCGATCGTTGAAAGTTAAATGATGTGTTTTTATTTTTATCAGAATACTCTTGCATCTCCAATGATTTTTTCACTTCAGCGATTGCTCTGCAGTGAGTTTTTTGGTGCTATTTAAATACTTTTTTTTTTTCTTTTGGTGCATAAAGTTGGCATCTTTTATGTTTCCAGTTAGTGGCATATCATATGCCATTAAATCCTAGGAGATAATATGAGATTGCTATGCCCCCAGAATCCAGATCATTAACCATTGTCCAATAGCATGTTGTATAGACCTAGAGAGTGCAGTAAACTTCTCTTTCAGTGATGATTTCATTTATCCTTACGGCCAATGTTGGTTACACATTAAGATCATTTCGTAGAAATATATCGGCAACATAAATTGGACATGGCTTTGAGAATCTCCATCTTTGTTGTAAGCTGATAAGATTGAATTTATTAATTAGAAGCTAAGGCATCTACTTCTTCCCATATGTTGGCAGCTTCAAATCTCTGCTCGTATATTTGCTGTTAGCCATCCAATCATTACTAGTCATTTGTCTCATTTTAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGCGTTTGGATAGCTGGGAAAGAATATCAACTTGCTCGTGTGCATTTCTTATCCATGAATTAGTTCCATTTCTATGTTTTATCTTGTAACTTTTAGATGTATGAGAATATGTATTTCATAATCATATTTCAGAGTAAGAAGAGATGATATTACAATAGTGTGCAAATTTTTATTAGTTGATAAAATTGGATGTGGAAACTTGATTCTTTGATCCTGCATCTCATCATGCTATATTTACTAAATCATACTTATATAAAATAAAATAGTGTTTA

mRNA sequence

ATGTTTGTATTAAATGTTCCATTTACAATAATCTCCAGGATTAAATACAGTATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCACGGTTGAAGAAGGGAGAAGTTTTATATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGAGAGAAGATGGTGAAAACCATAGCATCATCTCAAGGGCATGAAACTGAAGCCGAGAAATCTCAGAATCACTTTCTAAACTGCCCAAATGGTGAAAGAACTGATAACGATAATACTTTGATTGATGTGTTTCGATGGTCTCGCTGTAAGAAGCCATTGCCTCAGAAGGTTATGCGTTCTATTGGTATCCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGCGTTTGGATAGCTGGGAAAGAATATCAACTTGCTCGTGTGCATTTCTTATCCATGAATTAG

Coding sequence (CDS)

ATGTTTGTATTAAATGTTCCATTTACAATAATCTCCAGGATTAAATACAGTATAAGTATTGTTGCGGACAAAGGTCTAAAGAAGCCCCTCTACACATCTGCACGGTTGAAGAAGGGAGAAGTTTTATATCTAGAAACACATTCGTGCAGGTATGAACTCTGCTTTTCCGGAGAGAAGATGGTGAAAACCATAGCATCATCTCAAGGGCATGAAACTGAAGCCGAGAAATCTCAGAATCACTTTCTAAACTGCCCAAATGGTGAAAGAACTGATAACGATAATACTTTGATTGATGTGTTTCGATGGTCTCGCTGTAAGAAGCCATTGCCTCAGAAGGTTATGCGTTCTATTGGTATCCCACTGCCTTCTGAACACGTAGAGGTACTCGAGGATAATCTGGACTGGGAAGATGTACAGTGGTCACAGACTGGCGTTTGGATAGCTGGGAAAGAATATCAACTTGCTCGTGTGCATTTCTTATCCATGAATTAG

Homology

[Close]

BLAST of CSPI02G16410 vs. TrEMBL
Match: A0A0A0LJZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G337260 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 5.1e-83
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE
Sbjct: 658 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 717

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL
Sbjct: 718 AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 777

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Sbjct: 778 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

[Close]

BLAST of CSPI02G16410 vs. TrEMBL
Match: A0A0D2QAY5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G106900 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 4.2e-69
Identity = 127/150 (84.67%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCF+GEKMVK   +SQ HE +
Sbjct: 667 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATVASQAHEAD 726

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNH  +  NGE+ D++NTLIDVFRWSRCKKPLPQKVMRSIGIPLP EHVEVL +N+
Sbjct: 727 AEKSQNHHSHSSNGEKNDSENTLIDVFRWSRCKKPLPQKVMRSIGIPLPLEHVEVLVENV 786

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 787 DWEDVQWSQTGVWIAGKEYTLARVHFLSPN 816

[Close]

BLAST of CSPI02G16410 vs. TrEMBL
Match: A0A061FAF0_THECC (Peptidyl-prolyl cis-trans isomerase G isoform 4 OS=Theobroma cacao GN=TCM_033022 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.2e-69
Identity = 125/150 (83.33%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCF+GEKMVK   +SQ +ET+
Sbjct: 669 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATPASQAYETD 728

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
            EKSQNH  +  NGE+ D+DN +IDVFRWSRCKKPLPQK+MRSIGIPLP EHVEVLE+N+
Sbjct: 729 TEKSQNHHSHSSNGEKNDSDNIMIDVFRWSRCKKPLPQKIMRSIGIPLPLEHVEVLEENI 788

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 789 DWEDVQWSQTGVWIAGKEYTLARVHFLSSN 818

[Close]

BLAST of CSPI02G16410 vs. TrEMBL
Match: A0A061FAS4_THECC (Peptidyl-prolyl cis-trans isomerase G isoform 1 OS=Theobroma cacao GN=TCM_033022 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.2e-69
Identity = 125/150 (83.33%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCF+GEKMVK   +SQ +ET+
Sbjct: 668 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATPASQAYETD 727

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
            EKSQNH  +  NGE+ D+DN +IDVFRWSRCKKPLPQK+MRSIGIPLP EHVEVLE+N+
Sbjct: 728 TEKSQNHHSHSSNGEKNDSDNIMIDVFRWSRCKKPLPQKIMRSIGIPLPLEHVEVLEENI 787

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 788 DWEDVQWSQTGVWIAGKEYTLARVHFLSSN 817

[Close]

BLAST of CSPI02G16410 vs. TrEMBL
Match: V4RXK6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024915mg PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.6e-68
Identity = 124/148 (83.78%), Postives = 134/148 (90.54%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYEL F+GEKMVK + +S+ H+TE
Sbjct: 654 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELSFAGEKMVKAVPASESHDTE 713

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
            EKSQNH L+  NGE+ D DN + DVFRWSRCKKPLPQKVMRSIGIPLP EHVEV+E+NL
Sbjct: 714 TEKSQNHLLHSTNGEKNDGDNIMTDVFRWSRCKKPLPQKVMRSIGIPLPPEHVEVIEENL 773

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLS 162
           DWEDVQWSQTGVWIAGKEY LARVHFLS
Sbjct: 774 DWEDVQWSQTGVWIAGKEYTLARVHFLS 801

[Close]

BLAST of CSPI02G16410 vs. TAIR10
Match: AT5G08450.1 (AT5G08450.1 Histone deacetylation protein Rxt3 (InterPro:IPR013951))

HSP 1 Score: 246.9 bits (629), Expect = 8.6e-66
Identity = 121/158 (76.58%), Postives = 134/158 (84.81%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQ---GH 73
           IKYSISIVADKGLKKPL+TSARLKKGEVLYLETHSCRYELCF+GEK +K I +SQ    H
Sbjct: 764 IKYSISIVADKGLKKPLFTSARLKKGEVLYLETHSCRYELCFAGEKTIKAIQASQQQSSH 823

Query: 74  ET-----EAEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEH 133
           E         KSQNH  N   G++TD+DN+LIDVFRWSRCKKPLPQK+MRSIG PLP++H
Sbjct: 824 EAMETDNNNNKSQNHLTN---GDKTDSDNSLIDVFRWSRCKKPLPQKLMRSIGFPLPADH 883

Query: 134 VEVLEDNLDWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           +EVLE+NLDWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 884 IEVLEENLDWEDVQWSQTGVWIAGKEYTLARVHFLSPN 918

[Close]

BLAST of CSPI02G16410 vs. NCBI nr
Match: gi|778670329|ref|XP_011649442.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis sativus])

HSP 1 Score: 315.1 bits (806), Expect = 7.3e-83
Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE
Sbjct: 658 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 717

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL
Sbjct: 718 AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 777

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Sbjct: 778 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

[Close]

BLAST of CSPI02G16410 vs. NCBI nr
Match: gi|659121850|ref|XP_008460844.1| (PREDICTED: uncharacterized protein LOC103499596 isoform X2 [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE
Sbjct: 658 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 717

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL
Sbjct: 718 AEKSQNHFVHCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 777

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Sbjct: 778 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 807

[Close]

BLAST of CSPI02G16410 vs. NCBI nr
Match: gi|659121842|ref|XP_008460840.1| (PREDICTED: uncharacterized protein LOC103499596 isoform X1 [Cucumis melo])

HSP 1 Score: 312.0 bits (798), Expect = 6.2e-82
Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE
Sbjct: 679 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 738

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNHF++CPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL
Sbjct: 739 AEKSQNHFVHCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 798

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEYQLARVHFLSMN
Sbjct: 799 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 828

[Close]

BLAST of CSPI02G16410 vs. NCBI nr
Match: gi|823132537|ref|XP_012462906.1| (PREDICTED: uncharacterized protein LOC105782603 [Gossypium raimondii])

HSP 1 Score: 268.9 bits (686), Expect = 6.0e-69
Identity = 127/150 (84.67%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCF+GEKMVK   +SQ HE +
Sbjct: 667 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATVASQAHEAD 726

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
           AEKSQNH  +  NGE+ D++NTLIDVFRWSRCKKPLPQKVMRSIGIPLP EHVEVL +N+
Sbjct: 727 AEKSQNHHSHSSNGEKNDSENTLIDVFRWSRCKKPLPQKVMRSIGIPLPLEHVEVLVENV 786

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 787 DWEDVQWSQTGVWIAGKEYTLARVHFLSPN 816

[Close]

BLAST of CSPI02G16410 vs. NCBI nr
Match: gi|590612807|ref|XP_007022486.1| (Peptidyl-prolyl cis-trans isomerase G isoform 4 [Theobroma cacao])

HSP 1 Score: 268.1 bits (684), Expect = 1.0e-68
Identity = 125/150 (83.33%), Postives = 136/150 (90.67%), Query Frame = 1


Query: 14  IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFSGEKMVKTIASSQGHETE 73
           IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCF+GEKMVK   +SQ +ET+
Sbjct: 669 IKYSISIVADKGLKKPLYTSARLKKGEVLYLETHSCRYELCFTGEKMVKATPASQAYETD 728

Query: 74  AEKSQNHFLNCPNGERTDNDNTLIDVFRWSRCKKPLPQKVMRSIGIPLPSEHVEVLEDNL 133
            EKSQNH  +  NGE+ D+DN +IDVFRWSRCKKPLPQK+MRSIGIPLP EHVEVLE+N+
Sbjct: 729 TEKSQNHHSHSSNGEKNDSDNIMIDVFRWSRCKKPLPQKIMRSIGIPLPLEHVEVLEENI 788

Query: 134 DWEDVQWSQTGVWIAGKEYQLARVHFLSMN 164
           DWEDVQWSQTGVWIAGKEY LARVHFLS N
Sbjct: 789 DWEDVQWSQTGVWIAGKEYTLARVHFLSSN 818

The following BLAST results are available for this feature:

BLAST of CSPI02G16410 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI02G16410 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJZ2_CUCSA	5.1e-83	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G337260 PE=4 SV=1	[more]
A0A0D2QAY5_GOSRA	4.2e-69	84.67	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G106900 PE=4 SV=1	[more]
A0A061FAF0_THECC	7.2e-69	83.33	Peptidyl-prolyl cis-trans isomerase G isoform 4 OS=Theobroma cacao GN=TCM_033022...	[more]
A0A061FAS4_THECC	7.2e-69	83.33	Peptidyl-prolyl cis-trans isomerase G isoform 1 OS=Theobroma cacao GN=TCM_033022...	[more]
V4RXK6_9ROSI	3.6e-68	83.78	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10024915mg PE=4 SV=1	[more]

BLAST of CSPI02G16410 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G08450.1	8.6e-66	76.58	Histone deacetylation protein Rxt3 (InterPro:IPR013951)	[more]

BLAST of CSPI02G16410 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778670329\|ref\|XP_011649442.1\|	7.3e-83	100.00	PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis sativus]	[more]
gi\|659121850\|ref\|XP_008460844.1\|	6.2e-82	98.67	PREDICTED: uncharacterized protein LOC103499596 isoform X2 [Cucumis melo]	[more]
gi\|659121842\|ref\|XP_008460840.1\|	6.2e-82	98.67	PREDICTED: uncharacterized protein LOC103499596 isoform X1 [Cucumis melo]	[more]
gi\|823132537\|ref\|XP_012462906.1\|	6.0e-69	84.67	PREDICTED: uncharacterized protein LOC105782603 [Gossypium raimondii]	[more]
gi\|590612807\|ref\|XP_007022486.1\|	1.0e-68	83.33	Peptidyl-prolyl cis-trans isomerase G isoform 4 [Theobroma cacao]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0009908	flower development
biological_process	GO:0016575	histone deacetylation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:1902074	response to salt
biological_process	GO:0009845	seed germination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016853	isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G16410.1	CSPI02G16410.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G16410	Cla007845	Watermelon (97103) v1	cpiwmB146
CSPI02G16410	Lsi10G007740	Bottle gourd (USVL1VR-Ls)	cpilsiB093

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G16410	Cucumber (Chinese Long) v3	cpicucB082
CSPI02G16410	Watermelon (97103) v2	cpiwmbB125
CSPI02G16410	Wax gourd	cpiwgoB173
CSPI02G16410	Cucumber (Gy14) v1	cgycpiB339
CSPI02G16410	Cucurbita moschata (Rifu)	cmocpiB540
CSPI02G16410	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G16410	Watermelon (Charleston Gray)	cpiwcgB133
CSPI02G16410	Cucurbita pepo (Zucchini)	cpecpiB273
CSPI02G16410	Cucurbita pepo (Zucchini)	cpecpiB711
CSPI02G16410	Cucumber (Gy14) v2	cgybcpiB058