CSPI02G16090 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G16090
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Zinc finger, C2H2
Location	Chr2 : 15551921 .. 15554476 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTGGGTGAAGAAGAGATCAGAAATATTTGATAGCAAAAGAAAAGAGAGAAGAACTAAGACTCAGAAATTGGATGGAGATGGGTCACAGCTTTTTTAGTGAATTGTTGCCAAATAATTGTGATGTTATTGGTGAATGTCACAGCTTCTTAAATTTCTCTTCTTCATCTAATTCTTCGAATATTGGTCGAGACGATGGTGGCAAAGACGACGAAGATATGGCGAATTGTCTTATCCTTCTTGCTCAAGGTGAACCTGCAGCAGCTTCTCAACCATCTTCTTATTCATTGGGAAAGTTCTTCAGGAGAGACCCAGAAGGGCAAAACGGTAATTACAACTCTCCTTTTTTAGCTTCATACAAATTAGAAAATCAATATATGGTCCTCAAATAATTTAGTAATTAATAGGTTTCTTTTTTTCTTTTAGAAGAGTAATTAATAAGTTTCTAAAATTGTTTATTTTACAAAAATAGAAAAAAACTGATATCGCACGTACCATTATCGATTATAATTGTAATAAAATGTCTCAATTCATCTAAATTTAATTGACTTAAATCACAAGTTTCACACTATAATAACATCCAAACTTAAGAAAAAGATGTTAATTAGTACACTTCCTTACCGTTTATAGTTTTAATTGGTATAACCCTCCACATAATGAATTGATTTTTACCCTAAATTATTTTATATTTATTTTCCTATATCCACAAACTTAGACTCAGATTATTGAATTGTCTGAATGATATATTAGGTATTGCAAATATTTAATATATTAATAAAAAAAAAGGAAATTAACAAAAATAATAAAATGGATTTTTCTTTTTTACTATATTTGAAAAACATCTAATAAAAACCTATTTAAAAAAATGAAAATCTAAAAATGAATACATTATAGTTCTAACTAAAATTAAAATTTGTCATATCTACAAATTCTTTTATATTTTTACTCGTTAATATTTTAGATTCGTTTATATTTACTTTATATTTGTTATATATATAATGGATTAGTTATAGTAATTTTAAGAATATTAATCAATTATTTAATAACATTCCAAAATTTTCAAGTGTAACAAAAATCTATTAGTGACGAGCATCCATAAGTTTTTATGGTCTATGAGTGATACACCAATATTTGTAATATTGTCTATTGATTTCTACGTTAATACTCGATAGAACAAATTTGGTTATATTTGCACATTTTTTTAAAATATTACTGTATATGTTATACTTTTTTTAAGCAAAAATTGAAAAAATAGCAGAGTTGAACAAAAAAATATTTAATTAAAATCAGATATAATCAACTTTTTAAATATATATATAAATATTGTATAAATGAGTTTGTTTATTGTTATTAGTTGAGAAAAAAGAAGTGTTTCAATGAAACGGCTACATTTCTGAGTCCTTGTTTACAATGGCAGGTGCGAGCAAGGCAGCGGATGGTTGTGCCTACGAATGCAAAACCTGCCGCCGAACATTCCCATCCTTTCAAGCCCTCGGTGGCCACCGCTCCAGCCACAACCACAAGAACACCCCCATTACCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGAACCCCCCCATTACCCCCACCGCCACCCCCGCCAACCATAATTCGATCTCCACCACATCCCCGCCCAATAAACAGCTACAACAACGATTCAACAACAACAACAACGTTTCAAACCAATTGGATCAGGTTCGCATGAGCCGAACCGTTTATTACAACAATCTCAAACCCGCCAATCATAGAATTAAGGTCCATGAGTGCTCTGTTTGTGGCGCCGATTTCATTTCCGGCCAAGCCCTCGGCGGGCACATGAGACGCCACCGCCGTGGCTACGGCGGTGGAGCTTCGAGAGATTCCAGTGAGATTGACGGTCGTTGTTCTAAAAAGCAGAGAAGTAATTTATTGTGTTTGGATTTGAATCTCAATCTTCCGGCACCTGAAAATGATAAAAGAGAGAACTCGGGTGTTGTTGCATTGGCTGCCACGAATTTGGTGGACTGCCATTACTGA

mRNA sequence

ATGGAGATGGGTCACAGCTTTTTTAGTGAATTGTTGCCAAATAATTGTGATGTTATTGGTGAATGTCACAGCTTCTTAAATTTCTCTTCTTCATCTAATTCTTCGAATATTGGTCGAGACGATGGTGGCAAAGACGACGAAGATATGGCGAATTGTCTTATCCTTCTTGCTCAAGGTGAACCTGCAGCAGCTTCTCAACCATCTTCTTATTCATTGGGAAAGTTCTTCAGGAGAGACCCAGAAGGGCAAAACGGTGCGAGCAAGGCAGCGGATGGTTGTGCCTACGAATGCAAAACCTGCCGCCGAACATTCCCATCCTTTCAAGCCCTCGGTGGCCACCGCTCCAGCCACAACCACAAGAACACCCCCATTACCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGAACCCCCCCATTACCCCCACCGCCACCCCCGCCAACCATAATTCGATCTCCACCACATCCCCGCCCAATAAACAGCTACAACAACGATTCAACAACAACAACAACGTTTCAAACCAATTGGATCAGGTTCGCATGAGCCGAACCGTTTATTACAACAATCTCAAACCCGCCAATCATAGAATTAAGGTCCATGAGTGCTCTGTTTGTGGCGCCGATTTCATTTCCGGCCAAGCCCTCGGCGGGCACATGAGACGCCACCGCCGTGGCTACGGCGGTGGAGCTTCGAGAGATTCCAGTGAGATTGACGGTCGTTGTTCTAAAAAGCAGAGAAGTAATTTATTGTGTTTGGATTTGAATCTCAATCTTCCGGCACCTGAAAATGATAAAAGAGAGAACTCGGGTGTTGTTGCATTGGCTGCCACGAATTTGGTGGACTGCCATTACTGA

Coding sequence (CDS)

ATGGAGATGGGTCACAGCTTTTTTAGTGAATTGTTGCCAAATAATTGTGATGTTATTGGTGAATGTCACAGCTTCTTAAATTTCTCTTCTTCATCTAATTCTTCGAATATTGGTCGAGACGATGGTGGCAAAGACGACGAAGATATGGCGAATTGTCTTATCCTTCTTGCTCAAGGTGAACCTGCAGCAGCTTCTCAACCATCTTCTTATTCATTGGGAAAGTTCTTCAGGAGAGACCCAGAAGGGCAAAACGGTGCGAGCAAGGCAGCGGATGGTTGTGCCTACGAATGCAAAACCTGCCGCCGAACATTCCCATCCTTTCAAGCCCTCGGTGGCCACCGCTCCAGCCACAACCACAAGAACACCCCCATTACCCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAGAACCCCCCCATTACCCCCACCGCCACCCCCGCCAACCATAATTCGATCTCCACCACATCCCCGCCCAATAAACAGCTACAACAACGATTCAACAACAACAACAACGTTTCAAACCAATTGGATCAGGTTCGCATGAGCCGAACCGTTTATTACAACAATCTCAAACCCGCCAATCATAGAATTAAGGTCCATGAGTGCTCTGTTTGTGGCGCCGATTTCATTTCCGGCCAAGCCCTCGGCGGGCACATGAGACGCCACCGCCGTGGCTACGGCGGTGGAGCTTCGAGAGATTCCAGTGAGATTGACGGTCGTTGTTCTAAAAAGCAGAGAAGTAATTTATTGTGTTTGGATTTGAATCTCAATCTTCCGGCACCTGAAAATGATAAAAGAGAGAACTCGGGTGTTGTTGCATTGGCTGCCACGAATTTGGTGGACTGCCATTACTGA

Homology

[Close]

BLAST of CSPI02G16090 vs. Swiss-Prot
Match: ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.2e-14
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1


Query: 320 PTATPANHNSISTTSPPNKQLQQRFNNNNNVSNQLDQVRMSRTVYYNNLKPANHRIKVHE 379
           P  +      +  T P +   ++  N++  VS      + S  +        N   KVHE
Sbjct: 140 PRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNII--------NKANKVHE 199

Query: 380 CSVCGADFISGQALGGHMRRHRRGY--------GGGASRDSSEID-----GRCSKKQRSN 439
           CS+CG++F SGQALGGHMRRHR               SR+S+E +     GR  ++QR  
Sbjct: 200 CSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRK- 259

Query: 440 LLCLDLNLNLPAPENDKREN--SGVVALAATNLVDCHY 463
              L L+LNLPAPE+D RE+   G+V  A   L+DCHY
Sbjct: 260 --YLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]

BLAST of CSPI02G16090 vs. Swiss-Prot
Match: ZAT4_ARATH (Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 9.2e-06
Identity = 34/75 (45.33%), Postives = 41/75 (54.67%), Query Frame = 1


Query: 376 KVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSS---EIDGRCSKKQRSNLLCLDL 435
           KVHEC +C   F SGQALGGH R H    G G     S   +I+   S KQR       +
Sbjct: 241 KVHECPICFRVFTSGQALGGHKRSHGSNIGAGRGLSVSQIVQIEEEVSVKQRM------I 300

Query: 436 NLNLPAPENDKRENS 448
           +LNLPAP N++ E S
Sbjct: 301 DLNLPAP-NEEDETS 308

[Close]

BLAST of CSPI02G16090 vs. TrEMBL
Match: A0A0A0LQC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G326490 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE 60
           MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE
Sbjct: 1   MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE 60

Query: 61  PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK 120
           PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK
Sbjct: 61  PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK 120

Query: 121 NTPITP 127
           NTPITP
Sbjct: 121 NTPITP 126

[Close]

BLAST of CSPI02G16090 vs. TrEMBL
Match: A0A151TVH3_CAJCA (Zinc finger protein 1 OS=Cajanus cajan GN=KK1_010251 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.8e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1


Query: 357 VRMSRTVYYNNLKP---ANHRIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSS 416
           +++S  +Y NN       N + KVHECS+CGA+F SGQALGGHMRRHR       +  + 
Sbjct: 155 LQLSTALYNNNSSTRTIVNAKSKVHECSICGAEFTSGQALGGHMRRHRNLLSTPTTVSTI 214

Query: 417 EIDGRCSKKQRSNLLCLDLNLNLPAPENDKREN--------SGVVALAATNLVDCHY 463
             +G     +  +   LDL+LNLPAPE+D RE+          V+A +AT+LVDCHY
Sbjct: 215 RANGGDGSPEVKHKDVLDLDLNLPAPEDDHRESKPFPFQSKGKVIAFSATSLVDCHY 271

[Close]

BLAST of CSPI02G16090 vs. TrEMBL
Match: D7LIE1_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_481690 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 1


Query: 372 NHRIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEID-----GRCSKKQRSN 431
           N   KVHECS+CG++F SGQALGGHMRRHR       SR+S+E +     GR  ++QR  
Sbjct: 182 NKANKVHECSICGSEFTSGQALGGHMRRHRTATTAEVSRNSTEEEIEINIGRSIEQQRK- 241

Query: 432 LLCLDLNLNLPAPENDKREN--SGVVALAATNLVDCHY 463
              L L+LNLPAPE+D RE+   G+V  A   L+DCHY
Sbjct: 242 --YLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 276

[Close]

BLAST of CSPI02G16090 vs. TrEMBL
Match: A0A061FP50_THECC (C2H2-type zinc finger family protein, putative OS=Theobroma cacao GN=TCM_043349 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 5.8e-15
Identity = 67/173 (38.73%), Postives = 84/173 (48.55%), Query Frame = 1


Query: 314 KNPPITPTATPANHNSISTTSPPNKQLQQRFNNNNNVSNQLDQVRMSRTVYYNNLKPANH 373
           K    T  A+      I T +  +  LQ   NNNNN           R +Y NN     +
Sbjct: 172 KTRQFTAAASDEEGQFIRTNNLSSLSLQLTNNNNNN-----------RGLYSNN-----N 231

Query: 374 RIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEI--------DGRCSKKQRS 433
           + KVHECS+CGA+F SGQALGGHMRRHR   GG     S+ +        +    KK R 
Sbjct: 232 KAKVHECSICGAEFTSGQALGGHMRRHRGPIGGSIPTASTALSLTVPVAMESEQPKKPR- 291

Query: 434 NLLCLDLNLNLPAPENDKREN----------------SGVVALAATNLVDCHY 463
           N+L LDL+LNLPAPE+D RE+                   +  +A  LVDCHY
Sbjct: 292 NVLSLDLDLNLPAPEDDHRESKFPFASKQQQQQQQQQQSPLVFSAPTLVDCHY 327

[Close]

BLAST of CSPI02G16090 vs. TrEMBL
Match: A0A0D2VTX8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G006900 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.3e-14
Identity = 54/136 (39.71%), Postives = 71/136 (52.21%), Query Frame = 1


Query: 354 LDQVRMSRTVY------YNNLKPANHRIKVHECSVCGADFISGQALGGHMRRHRRGYGGG 413
           L +V M    Y      YNN   +  ++KVHECS+CGA+F SGQALGGHMRRHR   G  
Sbjct: 142 LSEVAMVEAAYEEQGPNYNNNNNSKVKVKVHECSICGAEFTSGQALGGHMRRHRGSIGNH 201

Query: 414 ASRDSSEIDGRCS---------KKQRSNLLCLDLNLNLPAPENDKRENSGVVA------- 463
            +  ++      +          K+  N+L L L+LNLPAPE+D RE+    A       
Sbjct: 202 VNVLTTNTTLSLTVPMALESEKPKKPPNVLSLSLDLNLPAPEDDHRESEFTFASTQQQQQ 261

[Close]

BLAST of CSPI02G16090 vs. TAIR10
Match: AT2G28200.1 (AT2G28200.1 C2H2-type zinc finger family protein)

HSP 1 Score: 79.7 bits (195), Expect = 5.2e-15
Identity = 58/158 (36.71%), Postives = 80/158 (50.63%), Query Frame = 1


Query: 320 PTATPANHNSISTTSPPNKQLQQRFNNNNNVSNQLDQVRMSRTVYYNNLKPANHRIKVHE 379
           P  +      +  T P +   ++  N++  VS      + S  +        N   KVHE
Sbjct: 140 PRTSTEEKTRLPLTQPKSSASEEGQNSHFKVSGSALASQASNII--------NKANKVHE 199

Query: 380 CSVCGADFISGQALGGHMRRHRRGY--------GGGASRDSSEID-----GRCSKKQRSN 439
           CS+CG++F SGQALGGHMRRHR               SR+S+E +     GR  ++QR  
Sbjct: 200 CSICGSEFTSGQALGGHMRRHRTAVTTISPVAATAEVSRNSTEEEIEINIGRSMEQQRK- 259

Query: 440 LLCLDLNLNLPAPENDKREN--SGVVALAATNLVDCHY 463
              L L+LNLPAPE+D RE+   G+V  A   L+DCHY
Sbjct: 260 --YLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 286

[Close]

BLAST of CSPI02G16090 vs. TAIR10
Match: AT3G10470.1 (AT3G10470.1 C2H2-type zinc finger family protein)

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-12
Identity = 49/132 (37.12%), Postives = 61/132 (46.21%), Query Frame = 1


Query: 14  NNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGEPAAASQPSSY--- 73
           NN  +I    S  + SSSSN++   +    ++D+DMANCLILLAQG      QP  +   
Sbjct: 73  NNNTLINGVTSSSSASSSSNNNATLKATADEEDQDMANCLILLAQGHSLPHLQPQPHPQQ 132

Query: 74  ----------------------SLGKFFRRDPEG---QNGASKAADGCAYECKTCRRTFP 118
                                 S  +F           NG    A    Y+CKTC RTFP
Sbjct: 133 QTRQLMMSYQDSGNNNNNAYRSSSRRFLETSSSNGTTTNGGGGRAGYYVYQCKTCDRTFP 192

[Close]

BLAST of CSPI02G16090 vs. TAIR10
Match: AT5G03510.1 (AT5G03510.1 C2H2-type zinc finger family protein)

HSP 1 Score: 69.7 bits (169), Expect = 5.3e-12
Identity = 39/75 (52.00%), Postives = 48/75 (64.00%), Query Frame = 1


Query: 45  DDEDMANCLILLAQGEPAAASQP--SSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRR 104
           +DEDMANCLILL+QG  A +S    S   +G F  + P    G     DG  Y+CKTC +
Sbjct: 69  EDEDMANCLILLSQGHQAKSSDDHLSMQRMGFFSNKKPVASLGLG--LDG-VYQCKTCDK 128

Query: 105 TFPSFQALGGHRSSH 118
           +F SFQALGGHR+SH
Sbjct: 129 SFHSFQALGGHRASH 140

[Close]

BLAST of CSPI02G16090 vs. TAIR10
Match: AT5G04390.1 (AT5G04390.1 C2H2-type zinc finger family protein)

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 54/171 (31.58%), Postives = 73/171 (42.69%), Query Frame = 1


Query: 347 NNNVSNQLDQVRMSRTVYYNNLKPA------NHRIKVHECSVCGADFISGQALGGHMRRH 406
           N   ++ +  V  + TV+ NN   +        + KVHEC +CGA+F SGQALGGHMRRH
Sbjct: 192 NTYANDAVSLVHTTTTVFKNNNSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRH 251

Query: 407 RRGYGGGA-----------------SRDSSEID----------GRCSKKQRSNLLCLDLN 463
           R      A                 S  S   D             +KK+   ++ LDL+
Sbjct: 252 RGAVVVPAVIAPTVTVATAAANTELSLSSMSFDQISDGHQDHLAMPAKKKARTVVSLDLD 311

[Close]

BLAST of CSPI02G16090 vs. TAIR10
Match: AT2G28710.1 (AT2G28710.1 C2H2-type zinc finger family protein)

HSP 1 Score: 65.5 bits (158), Expect = 1.0e-10
Identity = 37/83 (44.58%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 370 PANHRIKV--HECSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEIDGRCSKKQR--- 429
           P+  R+K   HEC +CGA+F  GQALGGHMR+HR G GGG  R  +      + K+    
Sbjct: 68  PSPKRVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMKKSGGG 127

Query: 430 --SNLLCLDLNLNLPAPENDKRE 446
               +LCLDLNL     E+ K E
Sbjct: 128 NGKRVLCLDLNLTPLENEDLKLE 150

[Close]

BLAST of CSPI02G16090 vs. NCBI nr
Match: gi|778674255|ref|XP_011650172.1| (PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus])

HSP 1 Score: 264.6 bits (675), Expect = 3.2e-67
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 1


Query: 1   MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE 60
           MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE
Sbjct: 1   MEMGHSFFSELLPNNCDVIGECHSFLNFSSSSNSSNIGRDDGGKDDEDMANCLILLAQGE 60

Query: 61  PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK 120
           PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK
Sbjct: 61  PAAASQPSSYSLGKFFRRDPEGQNGASKAADGCAYECKTCRRTFPSFQALGGHRSSHNHK 120

Query: 121 NTPITP 127
           NTPITP
Sbjct: 121 NTPITP 126

[Close]

BLAST of CSPI02G16090 vs. NCBI nr
Match: gi|659113380|ref|XP_008456545.1| (PREDICTED: zinc finger protein ZAT5-like [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 2.2e-55
Identity = 118/143 (82.52%), Postives = 125/143 (87.41%), Query Frame = 1


Query: 321 TATPANHNSISTTSPPNKQLQQRFNNNNNVSNQLDQVRMSRTVYYNNLKPAN-HRIKVHE 380
           TAT  +H  IS+TSP NKQ +QRFN NNNVSNQLDQVRMSR+ YYNN K +N H+IKVHE
Sbjct: 123 TATALDHKPISSTSPANKQHEQRFNYNNNVSNQLDQVRMSRSDYYNNFKSSNNHKIKVHE 182

Query: 381 CSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEIDGRCSKKQRSNLLCLDLNLNLPAP 440
           CSVCGADFISGQALGGHMRRHRRG GG  SRDSSEID RCSKKQRSNLLCLDLNLNLPAP
Sbjct: 183 CSVCGADFISGQALGGHMRRHRRGCGG-TSRDSSEIDRRCSKKQRSNLLCLDLNLNLPAP 242

Query: 441 ENDKRENSGVVALAATNLVDCHY 463
           ENDKREN G VA+ ATNLVDCHY
Sbjct: 243 ENDKRENLG-VAMGATNLVDCHY 263

[Close]

BLAST of CSPI02G16090 vs. NCBI nr
Match: gi|1012359824|gb|KYP71008.1| (Zinc finger protein 1 [Cajanus cajan])

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-16
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1


Query: 357 VRMSRTVYYNNLKP---ANHRIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSS 416
           +++S  +Y NN       N + KVHECS+CGA+F SGQALGGHMRRHR       +  + 
Sbjct: 155 LQLSTALYNNNSSTRTIVNAKSKVHECSICGAEFTSGQALGGHMRRHRNLLSTPTTVSTI 214

Query: 417 EIDGRCSKKQRSNLLCLDLNLNLPAPENDKREN--------SGVVALAATNLVDCHY 463
             +G     +  +   LDL+LNLPAPE+D RE+          V+A +AT+LVDCHY
Sbjct: 215 RANGGDGSPEVKHKDVLDLDLNLPAPEDDHRESKPFPFQSKGKVIAFSATSLVDCHY 271

[Close]

BLAST of CSPI02G16090 vs. NCBI nr
Match: gi|297826123|ref|XP_002880944.1| (hypothetical protein ARALYDRAFT_481690 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15
Identity = 51/98 (52.04%), Postives = 64/98 (65.31%), Query Frame = 1


Query: 372 NHRIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEID-----GRCSKKQRSN 431
           N   KVHECS+CG++F SGQALGGHMRRHR       SR+S+E +     GR  ++QR  
Sbjct: 182 NKANKVHECSICGSEFTSGQALGGHMRRHRTATTAEVSRNSTEEEIEINIGRSIEQQRK- 241

Query: 432 LLCLDLNLNLPAPENDKREN--SGVVALAATNLVDCHY 463
              L L+LNLPAPE+D RE+   G+V  A   L+DCHY
Sbjct: 242 --YLPLDLNLPAPEDDLRESKFQGIVFSATPALIDCHY 276

[Close]

BLAST of CSPI02G16090 vs. NCBI nr
Match: gi|590565767|ref|XP_007010041.1| (C2H2-type zinc finger family protein, putative [Theobroma cacao])

HSP 1 Score: 90.5 bits (223), Expect = 8.3e-15
Identity = 67/173 (38.73%), Postives = 84/173 (48.55%), Query Frame = 1


Query: 314 KNPPITPTATPANHNSISTTSPPNKQLQQRFNNNNNVSNQLDQVRMSRTVYYNNLKPANH 373
           K    T  A+      I T +  +  LQ   NNNNN           R +Y NN     +
Sbjct: 172 KTRQFTAAASDEEGQFIRTNNLSSLSLQLTNNNNNN-----------RGLYSNN-----N 231

Query: 374 RIKVHECSVCGADFISGQALGGHMRRHRRGYGGGASRDSSEI--------DGRCSKKQRS 433
           + KVHECS+CGA+F SGQALGGHMRRHR   GG     S+ +        +    KK R 
Sbjct: 232 KAKVHECSICGAEFTSGQALGGHMRRHRGPIGGSIPTASTALSLTVPVAMESEQPKKPR- 291

Query: 434 NLLCLDLNLNLPAPENDKREN----------------SGVVALAATNLVDCHY 463
           N+L LDL+LNLPAPE+D RE+                   +  +A  LVDCHY
Sbjct: 292 NVLSLDLDLNLPAPEDDHRESKFPFASKQQQQQQQQQQSPLVFSAPTLVDCHY 327

The following BLAST results are available for this feature:

BLAST of CSPI02G16090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ZAT5_ARATH	9.2e-14	36.71	Zinc finger protein ZAT5 OS=Arabidopsis thaliana GN=ZAT5 PE=2 SV=1	[more]
ZAT4_ARATH	9.2e-06	45.33	Zinc finger protein ZAT4 OS=Arabidopsis thaliana GN=ZAT4 PE=2 SV=1	[more]

BLAST of CSPI02G16090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQC1_CUCSA	2.2e-67	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G326490 PE=4 SV=1	[more]
A0A151TVH3_CAJCA	1.8e-16	44.44	Zinc finger protein 1 OS=Cajanus cajan GN=KK1_010251 PE=4 SV=1	[more]
D7LIE1_ARALL	1.5e-15	52.04	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]
A0A061FP50_THECC	5.8e-15	38.73	C2H2-type zinc finger family protein, putative OS=Theobroma cacao GN=TCM_043349 ...	[more]
A0A0D2VTX8_GOSRA	1.3e-14	39.71	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G006900 PE=4 SV=1	[more]

BLAST of CSPI02G16090 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G28200.1	5.2e-15	36.71	C2H2-type zinc finger family protein	[more]
AT3G10470.1	3.1e-12	37.12	C2H2-type zinc finger family protein	[more]
AT5G03510.1	5.3e-12	52.00	C2H2-type zinc finger family protein	[more]
AT5G04390.1	1.6e-11	31.58	C2H2-type zinc finger family protein	[more]
AT2G28710.1	1.0e-10	44.58	C2H2-type zinc finger family protein	[more]

BLAST of CSPI02G16090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674255\|ref\|XP_011650172.1\|	3.2e-67	100.00	PREDICTED: zinc finger protein ZAT5-like [Cucumis sativus]	[more]
gi\|659113380\|ref\|XP_008456545.1\|	2.2e-55	82.52	PREDICTED: zinc finger protein ZAT5-like [Cucumis melo]	[more]
gi\|1012359824\|gb\|KYP71008.1\|	2.6e-16	44.44	Zinc finger protein 1 [Cajanus cajan]	[more]
gi\|297826123\|ref\|XP_002880944.1\|	2.2e-15	52.04	hypothetical protein ARALYDRAFT_481690 [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|590565767\|ref\|XP_007010041.1\|	8.3e-15	38.73	C2H2-type zinc finger family protein, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007087	Zinc finger, C2H2
IPR015880	Zinc finger, C2H2-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G16090.1	CSPI02G16090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007087	Zinc finger, C2H2	PFAM	PF13912	zf-C2H2_6	coord: 94..117 score: 6.7E-10coord: 377..402 score: 5.6
IPR007087	Zinc finger, C2H2	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 97..119 score: -coord: 380..400 scor
IPR007087	Zinc finger, C2H2	PROFILE	PS50157	ZINC_FINGER_C2H2_2	coord: 378..400 score: 9.224coord: 95..122 score: 10
IPR015880	Zinc finger, C2H2-like	SMART	SM00355	c2h2final6	coord: 378..400 score: 0.1coord: 95..117 score:
None	No IPR available	unknown	Coil	Coil	coord: 314..315 scor
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 95..136 score: 3.4E-47coord: 286..462 score: 3.4E-47coord: 31..60 score: 3.4
None	No IPR available	PANTHER	PTHR26374:SF210	SUBFAMILY NOT NAMED	coord: 31..60 score: 3.4E-47coord: 286..462 score: 3.4E-47coord: 95..136 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI02G16090	Cla013733	Watermelon (97103) v1	cpiwmB114
CSPI02G16090	Csa2G326490	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G16090	MELO3C019843	Melon (DHL92) v3.5.1	cpimeB121
CSPI02G16090	ClCG08G007880	Watermelon (Charleston Gray)	cpiwcgB170
CSPI02G16090	Lsi08G006830	Bottle gourd (USVL1VR-Ls)	cpilsiB145
CSPI02G16090	MELO3C019843.2	Melon (DHL92) v3.6.1	cpimedB118
CSPI02G16090	CsaV3_2G021040	Cucumber (Chinese Long) v3	cpicucB087
CSPI02G16090	Cla97C08G150630	Watermelon (97103) v2	cpiwmbB164
CSPI02G16090	Bhi04G001049	Wax gourd	cpiwgoB168
CSPI02G16090	Cucsa.186170	Cucumber (Gy14) v1	cgycpiB293
CSPI02G16090	CmaCh15G004970	Cucurbita maxima (Rimu)	cmacpiB284
CSPI02G16090	Cp4.1LG13g10380	Cucurbita pepo (Zucchini)	cpecpiB167
CSPI02G16090	CsGy2G016240	Cucumber (Gy14) v2	cgybcpiB064

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G16090	Cucurbita maxima (Rimu)	cmacpiB704
CSPI02G16090	Cucurbita moschata (Rifu)	cmocpiB274
CSPI02G16090	Cucurbita moschata (Rifu)	cmocpiB697
CSPI02G16090	Cucurbita pepo (Zucchini)	cpecpiB387
CSPI02G16090	Silver-seed gourd	carcpiB0718