CSPI02G15660 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G15660
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr2 : 15198349 .. 15202126 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACCTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGCTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAAGGCAGAGAAGGAAACACAAGGTAAATATGATTTACTAGTTGTAGAAACATGTTTAGTGGAATATGAAAATTCTACCTGGATATTAGATTCAGGAGCCACTAACCATATTTGCTTCTCATTTCAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAGTGGGAGATTTAAAGTTGTTTTTTAGAGATAGATATGTCATACTTAAGAATGTCTTATATGTACCTCAAATGAAAAGAAATTTAATATCTATCTCTTGTATTTTGGAACAAATGTATAGAATATCTTTTGAAATTAATGAAGCGTTCGTTTTCTATAAAGGTATTCTAGTTTGTTCTGCTATACTTGAAGACAACTTATATAAGTTAAGACCAACTAGAGCAAATTTTGTCTTAAATACTGAAATATTCAGAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATAAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTTATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTTCATTATAGCATTTTTAGTCTTATATGTAGATGATGTTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAAAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCAGTATGGCTAAGAAAATTCTTGACAGATTTGGAAGTCGTTCCAAATATGCATCTACCAATCACTTTATACTGTGACAACAGTGGTGCAGTTGA

mRNA sequence

ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACCTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGCTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAAGGCAGAGAAGGAAACACAAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATAAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTTATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTTCATTATAGCATTTTTAGTCTTATATGTAGATGATGTTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAAAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCATGGTGCAGTTGA

Coding sequence (CDS)

ATGAATAGCTCAATAGTTCAACTTTTAGCTTCCGAAAAACTTAATGGCGATAATTATGCGGCTTGGAAATCAAATCTTAACACAATACTAGTGGTTGACGATTTAAGATTTGTCTTAACTGAGGAATGTCCTCAAAACCCTGCCTCTAATGCTAACCGAACTAGTCGGGATGCATATGATCGATGGATAAAAGCTAATGAAAAAGCCCGTGTCTACATTCTTGCCAGCATGTCTGATGTATTGGCAAAGAAACATGAATCCTTAGCCACGGCTAAAGAGATTATGGATTCATTAAGGGGAATGTTTGGGCAACCAGAATGGTCCTTAAGACACGAGGCAGTCAAATACATTTACACTAAGCGTATGAAGGAAGGGACCTCTGTTAGAGAACATGTTCTGGACATGATGATGCACTTCAACATCGCTGAAGTGAATGGTGGTCCCATCGAAGAGGTTAATCAAGTTAGTTTTATCTTAGAGTCTCTTCCGAAGAGCTTCATTCCATTCCAAACGAATGCGTCTTTGAACAAGATAGAATTTAACCTGACAACCCTTCTGAATGAACTCCAGCGATTCCAAAACCTAACTATGGGTAAAGGAAAACAAGTGGAAGCAAATGTTGCTACCACAAAAAGAAAATTTATAAGAGGATCGTCCTCTAAAACCAAAGCTGGACCCTCAAAACCTAATGCTCAAATAAAAAAGAAGGGAAAGGGAAAGACTCCCAAACAGAACAAGGGTAAGAAAGCTGCAGAAAAAGGTAAGTGTTACCATTGTGGCCAAAACGGGCACTGGTTAAGAAACTGCCCAAAATACCTTGCAGAAAAAAAAGGCAGAGAAGGAAACACAAGGAAAATAGTTCTTGGAAAAAGCTTTCAGAAGGCGAGATCACTCTCAAGGTTGGAACAGGAGAGATGGTCTCAGCTTCAGCAAACAGCTGAAACTCAGAATAAAAGACAAAAAGTTTCTTCTAATGCCTATTTATGGCACTTAAGACTTGGTCACATAAATCTCAATAGGATTGGGAGATTGGTTAAAAGTGGGCTTCTAAGTCCGTTAGAAGATAACTCTTTACCTCCTTGTGAATCTTGTCTTGAAGGAAAAATGACCAAGAGATCTTTTACTGGAAAAGGTCTAAGAGCCAAAGGACCCTTAGAGCTCGTACATTCGGACCTTTGTGGACCAATGAATGTCAAAGCTCGAGGTGGATATGAATATTTCATTAGCTTCATTGATGATTATTCAAGGTATGGTCATATTTACCTAATACATCATAAGTCTAATAGTCTTGAAAAGTTCAAAGAATATAAGGCTGAAGTAGAAAACGAATTAGGTAAAACAATAAAAATACTTCGATCAGATCGAGGTGGAGAGTATATGGACTTACGATTCCGAGACTATTTAATAGAAAATGGAATCCAGTCACAACTCTCTGCACCTAGTACACCTCAACAGAACGGTGTATCAGAAAGAAGAAACCGGACCTTGTTAGACATGGTTCGCTCTATGATAAGTTTTTCTCAGATGTCAGATTCTTTTTGGGGATATGCTTTAGAAACAGCTGCTTATATTTTGAATAATGTTCCCTCTAAAAGTGTTTCAGAAACACCTTATGAGCTATGGAAAGGGCGTAAAGGAAGTTTACGTCATTTTAGAATTTGGGGTTGTCCAGCACACGTGTTGGTACAAAATCCAAAGAAATTGGAACATCGTTCAAAATTATGCTTTTTTATAGGTTATCCAAAAGAATCAAGAGGTGGTTTGTTTTATGATCCTCAAGAAAATAAAATATTTGTGTCAACAAATGCCACATTCTTAGAGGAAGACCACATCAGGGATCATCAACCTCGTAGTAAACTAGTATTAAAAGAAATTTCCAAAAGTGCTATAGATAAACCTAGTTCATCCACTAAGGTAGTTGATAAGACTAGGAAATCTGGTCAATCACATCCTTCTCAACAGTTGAGAGAGCCTCGACGTAGTGGGAGGGTTGTTCATCAGCCTGATCGCTATTTGGGTTTAATTGAAACTCAAGTCGTCATACCTGACGATGGCATAGAGGATCCATTAACCTATAAACAGGCAATGAAAGATGTAGATCGTGACCAATGGATCAAAGCCATGGACCTCGAAATGGAGTCTATGTACTTTAATTCTGTCTGGACTCTAGTAGATCAACCAAATGACGTAAAACCTATTGGTTGTAAATGGATCTACAAGAGAAAACGAGACCATGCCGGTAAAGTACAGACTTTCAAGGCTCGACTTGTGGCAAAGGGTTATACCCAGAGAGAGGGAGTAGACTATGAGGAAACTTTCTCTCCTGTTGCCATGTTAAAGTCAATTAGAATACTCTTATCCATCGCCACTTTTTATGATTATGAAATTTGGCAGATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTTCATTATAGCATTTTTAGTCTTATATGTAGATGATGTTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAAAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCATGGTGCAGTTGA
Homology
[Close]
BLAST of CSPI02G15660 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 1.5e-163
Identity = 327/817 (40.02%), Postives = 477/817 (58.38%), Query Frame = 1 

Query: 328  LWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLEL 387
            LWH R+GH++   +  L K  L+S  +  ++ PC+ CL GK  + SF     R    L+L
Sbjct: 424  LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 483

Query: 388  VHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGKT 447
            V+SD+CGPM +++ GG +YF++FIDD SR   +Y++  K    + F+++ A VE E G+ 
Sbjct: 484  VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 543

Query: 448  IKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISFS 507
            +K LRSD GGEY    F +Y   +GI+ + + P TPQ NGV+ER NRT+++ VRSM+  +
Sbjct: 544  LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603

Query: 508  QMSDSFWGYALETAAYILNNVPSKSVS-ETPYELWKGRKGSLRHFRIWGCPA--HVLVQN 567
            ++  SFWG A++TA Y++N  PS  ++ E P  +W  ++ S  H +++GC A  HV  + 
Sbjct: 604  KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 663

Query: 568  PKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKE 627
              KL+ +S  C FIGY  E  G   +DP + K+  S +  F E + +R     S+ V   
Sbjct: 664  RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE-VRTAADMSEKVKNG 723

Query: 628  ISKSAI------DKPSSSTKVVDKTRKSGQS-------------------HPSQ---QLR 687
            I  + +      + P+S+    D+  + G+                    HP+Q   Q +
Sbjct: 724  IIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQ 783

Query: 688  EPRRSGRVVHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMY 747
              RRS R   +  RY       V+I DD   +P + K+ +   +++Q +KAM  EMES+ 
Sbjct: 784  PLRRSERPRVESRRYPST--EYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQ 843

Query: 748  FNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPV 807
             N  + LV+ P   +P+ CKW++K K+D   K+  +KARLV KG+ Q++G+D++E FSPV
Sbjct: 844  KNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPV 903

Query: 808  AMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKK 867
              + SIR +LS+A   D E+ Q+DVKTAFL+G+LEE IYM QPEGF    ++  VCKL K
Sbjct: 904  VKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNK 963

Query: 868  SIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKVV---NFIIAFLVLYVDDVLLIG 927
            S+YGLKQA R W ++FD+ +KS  + +   +PCVY K     NFII  L+LYVDD+L++G
Sbjct: 964  SLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFII--LLLYVDDMLIVG 1023

Query: 928  NDVGYLTDIKKWLAMQFQKRS--------GRCTIRSR--------------------NPN 987
             D G +  +K  L+  F  +         G   +R R                    N  
Sbjct: 1024 KDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMK 1083

Query: 988  CSKPYG------IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMV 1047
             +KP        + LSK+ CP T +E  +M  +PY+SAVGSLMYAM+CTRPDI ++VG+V
Sbjct: 1084 NAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVV 1143

Query: 1048 SRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGS 1077
            SR+  NPG++HW AVK IL+YLR T    L +G  D IL GYTD+D   D D RKS++G 
Sbjct: 1144 SRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGY 1203

[Close]
BLAST of CSPI02G15660 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 242.7 bits (618), Expect = 1.9e-62
Identity = 166/550 (30.18%), Postives = 279/550 (50.73%), Query Frame = 1 

Query: 570  HRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRD-------HQPRSKLVL 629
            + SK C  I + K+S+       + NK F++ +     +DH+ +       ++ R     
Sbjct: 782  NESKECDNIQFLKDSK-------ESNKYFLNESKKRKRDDHLNESKGSGNPNESRESETA 841

Query: 630  KEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLG--LIETQVV 689
            + + +  ID P+ +  +    R+S +     Q+          ++ D  L   ++    +
Sbjct: 842  EHLKEIGIDNPTKNDGIEIINRRSERLKTKPQIS--------YNEEDNSLNKVVLNAHTI 901

Query: 690  IPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYK 749
              D     P ++ +     D+  W +A++ E+ +   N+ WT+  +P +   +  +W++ 
Sbjct: 902  FNDV----PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFS 961

Query: 750  RKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMD 809
             K +  G    +KARLVA+G+TQ+  +DYEETF+PVA + S R +LS+   Y+ ++ QMD
Sbjct: 962  VKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMD 1021

Query: 810  VKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYG 869
            VKTAFLNG L+E IYM  P+G         VCKL K+IYGLKQA+R W   F+ A+K   
Sbjct: 1022 VKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECE 1081

Query: 870  FEQNVDEPCVY---KKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQFQ------ 929
            F  +  + C+Y   K  +N  I +++LYVDDV++   D+  + + K++L  +F+      
Sbjct: 1082 FVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNE 1141

Query: 930  -KRSGRCTIRSRNPNCSKPYGIHLSK-------EQC----PKTPQEV-------EDMRNI 989
             K      I  +          ++ K       E C       P ++       ++  N 
Sbjct: 1142 IKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNT 1201

Query: 990  PYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYG 1049
            P  S +G LMY MLCTRPD+  +V ++SRY S    + W  +K +L+YL+ T D  L++ 
Sbjct: 1202 PCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF- 1261

Query: 1050 TKDLI----LTGYTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRSIKQTCIADSTMEAEY 1078
             K+L     + GY DSD+   +  RKST+G +F + +   + W + +Q  +A S+ EAEY
Sbjct: 1262 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1308

[Close]
BLAST of CSPI02G15660 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 4.2e-25
Identity = 89/307 (28.99%), Postives = 137/307 (44.63%), Query Frame = 1 

Query: 799  MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 858
            MDV TAFLN  ++E IY+ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1    MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 859  YGFEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQF-------- 918
             GF ++  E  +Y +  +    ++ +YVDD+L+          +K+ L   +        
Sbjct: 61   IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 919  ---------QKRSGRCTIRSRNPNCSKPYGIHLSKEQCPKTP---------QEVEDMRNI 978
                     Q  +G  T+  ++          ++  +  +TP              +++I
Sbjct: 121  DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 979  -PYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY 1038
             PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T+   L Y
Sbjct: 181  TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 1039 GT-KDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK-QTCIADSTMEAEYVA 1077
             +   L LT Y D+      D   ST G V  L G  V W S K +  I   + EAEY+ 
Sbjct: 241  RSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEAEYIT 300

[Close]
BLAST of CSPI02G15660 vs. Swiss-Prot
Match: YL21B_YEAST (Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-LR1 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 7.8e-24
Identity = 84/315 (26.67%), Postives = 146/315 (46.35%), Query Frame = 1 

Query: 312 TAETQNKRQKVSSNAY-LWHLRLGHINLNRIGRLVKSGLLSPLEDNSLP-------PCES 371
           T    NK + V+   Y L H  LGH N   I + +K   ++ L+++ +         C  
Sbjct: 576 TINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPD 635

Query: 372 CLEGKMTKRSFTGKGLRAK-----GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYG 431
           CL GK TK     KG R K      P + +H+D+ GP++   +    YFISF D+ +R+ 
Sbjct: 636 CLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQ 695

Query: 432 HIYLIHHKSNS--LEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 491
            +Y +H +     L  F    A ++N+    + +++ DRG EY +     +    GI + 
Sbjct: 696 WVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITAC 755

Query: 492 LSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSET 551
            +  +  + +GV+ER NRTLL+  R+++  S + +  W  A+E +  I N++ S    ++
Sbjct: 756 YTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKS 815

Query: 552 PYELWKGRKG-SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYP-KESRGGLFYDPQE 610
             +   G  G  +     +G P  V   NP    H   +  +  +P + S G + Y P  
Sbjct: 816 ARQ-HAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSL 875

[Close]
BLAST of CSPI02G15660 vs. Swiss-Prot
Match: YO22B_YEAST (Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY2B-OR2 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.0e-23
Identity = 84/318 (26.42%), Postives = 146/318 (45.91%), Query Frame = 1 

Query: 312 TAETQNKRQKVSSNAY-LWHLRLGHINLNRIGRLVKSGLLSPLEDNSLP-------PCES 371
           T    NK + V+   Y L H  LGH N   I + +K   ++ L+++ +         C  
Sbjct: 576 TINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPD 635

Query: 372 CLEGKMTKRSFTGKGLRAK-----GPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYG 431
           CL GK TK     KG R K      P + +H+D+ GP++   +    YFISF D+ +R+ 
Sbjct: 636 CLIGKSTKHRHV-KGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQ 695

Query: 432 HIYLIHHKSNS--LEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQ 491
            +Y +H +     L  F    A ++N+    + +++ DRG EY +     +    GI + 
Sbjct: 696 WVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITAC 755

Query: 492 LSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSET 551
            +  +  + +GV+ER NRTLL+  R+++  S + +  W  A+E +  I N++ S    ++
Sbjct: 756 YTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKS 815

Query: 552 PYELWKGRKG-SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYP-KESRGGLFYDPQE 611
             +   G  G  +     +G P  V   NP    H   +  +  +P + S G + Y P  
Sbjct: 816 ARQ-HAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSL 875

Query: 612 NKIFVSTNATFLEEDHIR 613
            K   +TN   L+ +  +
Sbjct: 876 KKTVDTTNYVILQNNQTK 891

[Close]
BLAST of CSPI02G15660 vs. TrEMBL
Match: E2GK51_BRYDI (Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1)

HSP 1 Score: 1365.1 bits (3532), Expect = 0.0e+00
Identity = 672/805 (83.48%), Postives = 725/805 (90.06%), Query Frame = 1 

Query: 307  SQLQQTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLE 366
            +++ +T ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESCLE
Sbjct: 423  TEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCESCLE 482

Query: 367  GKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHK 426
            GKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHK
Sbjct: 483  GKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHK 542

Query: 427  SNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQN 486
            S S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPSTPQQN
Sbjct: 543  SESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQN 602

Query: 487  GVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKG 546
            GVSERRNRTLLDMVRSM+S++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK 
Sbjct: 603  GVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKS 662

Query: 547  SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFL 606
            SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFL
Sbjct: 663  SLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNATFL 722

Query: 607  EEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVH 666
            EEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRRSGRVVH
Sbjct: 723  EEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRRSGRVVH 782

Query: 667  QPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQ 726
            QP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD 
Sbjct: 783  QPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLVDL 842

Query: 727  PNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 786
            P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL
Sbjct: 843  PSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL 902

Query: 787  SIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASR 846
            SIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASR
Sbjct: 903  SIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASR 962

Query: 847  SWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWL 906
            SWNIRFDTAIKSYGFEQNVDEPCVYKK+VN ++AFL+LYVDD+LLIGNDV YLTD+KKWL
Sbjct: 963  SWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWL 1022

Query: 907  AMQFQKRS--------GRCTIRSRN---------------------PNCSK-----PYGI 966
              QFQ +         G   +R+R                       N  K      +GI
Sbjct: 1023 NTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGI 1082

Query: 967  HLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWT 1026
            HLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWT
Sbjct: 1083 HLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWT 1142

Query: 1027 AVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRS 1078
            AVKNILKYLRRT++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS
Sbjct: 1143 AVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRS 1202

[Close]
BLAST of CSPI02G15660 vs. TrEMBL
Match: A0A165U314_9ROSI (Gag/pol protein OS=Momordica dioica PE=4 SV=1)

HSP 1 Score: 1074.3 bits (2777), Expect = 1.2e-310
Identity = 549/808 (67.95%), Postives = 621/808 (76.86%), Query Frame = 1 

Query: 314  ETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS 373
            ETQNK+Q   S  YLWHLRLGHINLNRI +L K GLL  LED SLPPCESCLEGKMTKR 
Sbjct: 437  ETQNKKQNNDSAMYLWHLRLGHINLNRIEKLHKDGLLEQLEDFSLPPCESCLEGKMTKRP 496

Query: 374  FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKF 433
            FTGKGLRA   LEL+H+D+CGPM+VKARGGY+YF+SF DD SRYG++YL+ HKS S EKF
Sbjct: 497  FTGKGLRASDLLELIHTDVCGPMSVKARGGYQYFLSFTDDLSRYGYVYLLKHKSESFEKF 556

Query: 434  KEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRN 493
            KE++AEVENE+GK IK LRSDRGGEYM   F D+L E GI SQLSAP TPQ NGVSERRN
Sbjct: 557  KEFQAEVENEIGKKIKTLRSDRGGEYMSSEFGDHLREFGIVSQLSAPGTPQCNGVSERRN 616

Query: 494  RTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRI 553
            RTLLDMVRSM+S++ + DSFWGYA E    ILN VPSKSV ETPYELW GRK SL   +I
Sbjct: 617  RTLLDMVRSMMSYADLPDSFWGYARERERAILNRVPSKSVEETPYELWYGRKSSLSFLKI 676

Query: 554  WGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRD 613
            WGCPAHV    PKKLE RS+ C F+GYPKE+RG  FY PQENK+FV+TN  FLE++ +  
Sbjct: 677  WGCPAHVKKLQPKKLEPRSEKCLFVGYPKETRGYYFYHPQENKVFVATNEAFLEKEFLSR 736

Query: 614  HQPRSKLVLKEISKSAI-----DKPSSSTK-VVDKTR-KSGQSH--PSQQLREPRRSGRV 673
            HQP SK+VLK + +  I     DKPSSSTK VVDK      QSH    Q+LR PRRSGR 
Sbjct: 737  HQPGSKIVLKAVVEPLIPLDGTDKPSSSTKVVVDKAEVNDDQSHTPDQQELRVPRRSGRS 796

Query: 674  VHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV 733
               P+RYLGL+ETQ++I D+G EDP  YKQAM   D DQW+KAM+ EMESMY N VWTLV
Sbjct: 797  RRAPNRYLGLVETQIMILDNGEEDPTNYKQAMVGPDSDQWLKAMNSEMESMYDNKVWTLV 856

Query: 734  DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 793
            D P+DVKPIGCKWIYK+KRD    V  FKARLVAKG+T+   + YEETFSPVAMLKSIRI
Sbjct: 857  DLPSDVKPIGCKWIYKKKRDQDSNVTVFKARLVAKGFTRSLSLSYEETFSPVAMLKSIRI 916

Query: 794  LLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQA 853
            +L+IA F+DYEIWQMDVKTAFLNGNLEESIYM QPEGF+ QDQEQK CKL+ SIYGLKQA
Sbjct: 917  ILAIAAFFDYEIWQMDVKTAFLNGNLEESIYMIQPEGFVAQDQEQKACKLQGSIYGLKQA 976

Query: 854  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKK 913
            SRSWNIRFD  IK++GF QNVDE CVYKK+   ++AFL+LYVDD+LLIGNDV YL D+KK
Sbjct: 977  SRSWNIRFDEVIKAFGFIQNVDESCVYKKISGSVVAFLILYVDDILLIGNDVEYLEDVKK 1036

Query: 914  WLAMQF-----------------QKRSGRCTIRSRNPNCSKPYG---------------- 973
            WL   F                 + RS +    S++    K                   
Sbjct: 1037 WLNTSFSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFRH 1096

Query: 974  -IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDH 1033
             IHLSKEQCPKTPQEVEDMRNIPY+SA+GSLMYAMLCTRPD+CY++ +VSRYQSNPGRDH
Sbjct: 1097 GIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDH 1156

Query: 1034 WTAVKNILKYLRRTKDYMLMY-GTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVV 1078
            WTAVKNILKYLRRT++  L+Y G KDL + GYTDS FQTDKD  KS SG VFTLNGGAV 
Sbjct: 1157 WTAVKNILKYLRRTRNMFLVYGGDKDLAVKGYTDSSFQTDKDDSKSQSG-VFTLNGGAVS 1216

[Close]
BLAST of CSPI02G15660 vs. TrEMBL
Match: O23864_9ORYZ (Polyprotein OS=Oryza australiensis PE=4 SV=1)

HSP 1 Score: 823.9 bits (2127), Expect = 2.2e-235
Identity = 426/786 (54.20%), Postives = 542/786 (68.96%), Query Frame = 1 

Query: 327  YLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLE 386
            ++WH RLGHIN  R+ +L K GLL   +  S   CESCL GKMTK  FTG   RA   L 
Sbjct: 438  FIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLA 497

Query: 387  LVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGK 446
            LVH+D+CGPM+  ARGGY+YFI+F DD+SRYG+IYL+ HKS S EKFKE++ EV+N LGK
Sbjct: 498  LVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGK 557

Query: 447  TIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISF 506
            TIK LRSDRGGEY+   F ++L + GI  QL+ P TPQ NGVSERRNRTLLDMVRSM+S 
Sbjct: 558  TIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQ 617

Query: 507  SQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPK 566
            S +  SFWGYALETAA  LN VPSKSV +TPYE+W G+  SL   +IWGC A+V      
Sbjct: 618  SDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSD 677

Query: 567  KLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEIS 626
            KL  +S  CF +GYPKE++G  FY+ ++ K+FV+ +  FLE++ +       ++ L+E+ 
Sbjct: 678  KLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSGIRVHLEEVQ 737

Query: 627  KSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGI 686
            ++  +  S++T+   +      + P      PRRS R    PDRY G  +  +++ D+  
Sbjct: 738  ETP-ETVSATTE--PQQEDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDN-- 797

Query: 687  EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 746
            ++P TY++AM   D ++W+ AM  E+ESMY N VW LVD P+ VK I CKW++K+K D  
Sbjct: 798  DEPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMD 857

Query: 747  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 806
            G V  +KARLVAKG+ Q +GVDY+ETFSPVAMLKSIRI+L+IA ++DYEIWQMDVKTAFL
Sbjct: 858  GNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFL 917

Query: 807  NGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNVD 866
            NGNL E +YM QP+GF++ +   K+CKL+KSIYGLKQASRSWNIRFD  IK +GF +N +
Sbjct: 918  NGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEE 977

Query: 867  EPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQF---------------- 926
            E CVYKKV    I FL+LYVDD+LLIGND+  L  +K  L   F                
Sbjct: 978  EACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRI 1037

Query: 927  -QKRSGRC-----------TIRSRNPNCSK------PYGIHLSKEQCPKTPQEVEDMRNI 986
             + RS R             ++  N + SK       +GI+LSK QCP+T  E   M  +
Sbjct: 1038 YRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMV 1097

Query: 987  PYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY- 1046
            PYASA+GS+MYAMLCTRPD+ Y++   SRYQS+PG  HWTAVKNILKYLRRTKD  L+Y 
Sbjct: 1098 PYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYG 1157

Query: 1047 GTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAAC 1078
            G +DL+++GYTD+ FQTDKD  +S SG VF LNGGAV W+S KQ  +ADST EAEY+AA 
Sbjct: 1158 GEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAAS 1217

[Close]
BLAST of CSPI02G15660 vs. TrEMBL
Match: Q7Y1M7_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0053G10.9 PE=4 SV=1)

HSP 1 Score: 813.1 bits (2099), Expect = 3.9e-232
Identity = 487/1126 (43.25%), Postives = 654/1126 (58.08%), Query Frame = 1 

Query: 2    NSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDR 61
            N ++  +L  EKL G N+  W  NL  +L  +   FVLTE  P N  +NA    R  +++
Sbjct: 8    NFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHEK 67

Query: 62   WIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKR 121
                       +LA+MS  L +++E+L  A  I+  LR MF     + R    K ++  R
Sbjct: 68   RCNDYLDISCLMLATMSPELQRQYEAL-DAHTIITGLRNMFEDQARAERFNTSKSLFACR 127

Query: 122  MKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFN 181
            + EG  V  HV+ M+ +    +  G P+        IL+SLP SF PF  N ++N +   
Sbjct: 128  LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 187

Query: 182  LTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNA-QIKKKGKGK 241
            L  L   L+  +         V   +   KRK     ++K      K N+ +I      K
Sbjct: 188  LAELHGMLKTAEESIKKNSNHV---MVMHKRK----PNNKKSGQKRKLNSDEITSTSNSK 247

Query: 242  TPKQNKGKKAAEKGKCYHCGQN-GHWLRN----CPKYLAEKKGREGNTRKIVLGKSFQKA 301
            T  Q  G  +A+  +C+ C +  G+  R+    C  Y  +           +        
Sbjct: 248  TKVQKTG--SAKDAECFFCKETEGYGFRSVDNGCSVYYND-----------IFYFHAPMM 307

Query: 302  RSLSRLEQERWSQLQQTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLED 361
              L  +  +  S     A+ Q  R    +  ++WH  LGHIN  RI +L + GLL   + 
Sbjct: 308  NGLYIVNLDGCSVYNINAKRQ--RPNNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDF 367

Query: 362  NSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYS 421
             S   CESCL GKMTK  FTG+  RA   L LVH+D+CGPM+  ARGG+ YFI+F D++S
Sbjct: 368  ESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFS 427

Query: 422  RYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQS 481
            RYG++YL+ HKS S EKF+E++ EV+N LGKTIK LRSDRGGEY+ L + ++L E GI  
Sbjct: 428  RYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVP 487

Query: 482  QLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSE 541
            QL+ P TPQ N VSERRNR LLDMVRSM+S + M  SFWGYALETAA+ LN VPSKSV +
Sbjct: 488  QLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDK 547

Query: 542  TPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQEN 601
            TPYE+W G++ SL   +IW C                         +E++G  FY+ +E 
Sbjct: 548  TPYEIWTGKRPSLSFLKIWCC-------------------------EETKGYYFYNREEG 607

Query: 602  KIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQL 661
            K+FV+ +  FLE++ I      S + LKEI ++     ++ST    +  +       Q +
Sbjct: 608  KVFVARHGVFLEKEFISRKDSGSMVRLKEIQETP---ENASTSTQPQVEQDVVQQVEQVV 667

Query: 662  REP-------RRSGRVVHQPDRYLGLIETQ--VVIPDDGIEDPLTYKQAMKDVDRDQWIK 721
             EP       RRS R+   P RY  L   Q  +++ D+  ++P TY++AM   D ++W+ 
Sbjct: 668  VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDN--DEPTTYEEAMVGPDTEKWLG 727

Query: 722  AMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG 781
            AM  E+ESM+ N VW LVD P+ VK I CKWI+K+  D  G V  + ARLVAKG+ Q +G
Sbjct: 728  AMKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQG 787

Query: 782  VDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQD 841
            VDY+ETFSPVAMLKSIRI+L+IA ++DYEIWQMDVKTAFLNGNL+E +YM+QP+GF++  
Sbjct: 788  VDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQ 847

Query: 842  QEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYV 901
              +K+CKL+KSIY LKQASRSWNIRFD  +K+ GF +N +EPCVYKK+    + FL+LYV
Sbjct: 848  SAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYV 907

Query: 902  DDVLLIGNDVGYLTDIKKWLAMQF-----------------QKRSGRCTIRSRNPNCSK- 961
            DD+LLIGND+  L  +K  L   F                 + RS R    S++    K 
Sbjct: 908  DDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKV 967

Query: 962  ----------------PYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDI 1021
                             +GI+L K QCP+T  E   M  IPYASA+GS+MYAMLCTR D+
Sbjct: 968  LKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDV 1027

Query: 1022 CYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYG-TKDLILTGYTDSDFQTDKD 1078
             Y++   SRYQS+ G  HW AVKNILKYLRRTKD  L+YG  ++L++ GYTD+ FQTDKD
Sbjct: 1028 SYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKD 1080

[Close]
BLAST of CSPI02G15660 vs. TrEMBL
Match: A0A015J5I9_9GLOM (Gag-pol fusion protein OS=Rhizophagus irregularis DAOM 197198w GN=RirG_273610 PE=4 SV=1)

HSP 1 Score: 783.5 bits (2022), Expect = 3.3e-223
Identity = 409/792 (51.64%), Postives = 527/792 (66.54%), Query Frame = 1 

Query: 326  AYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPL 385
            A LWH RLGHI+  RI +L K G+L   +  S   CESCL GKMTK  F G   R +G L
Sbjct: 412  ACLWHSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGKMTKSPFKGSFERGEGLL 471

Query: 386  ELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELG 445
            +++H+D+CGP     + G  ++++F DD+SRYG+IYLI HKS++ EKFKE+K EVEN+LG
Sbjct: 472  DIIHTDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSDTFEKFKEFKNEVENQLG 531

Query: 446  KTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMIS 505
            + IK+LRSDRGGEY+ + F DYL E GI SQL+ P TPQ NGV+ERRNRTLLDMVRSM+S
Sbjct: 532  RKIKMLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDMVRSMMS 591

Query: 506  FSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNP 565
             + +   FWGYALETAA+ILN VP+K V++TP+E+W G+  SL H ++WGC A V  +  
Sbjct: 592  RASLPIHFWGYALETAAHILNLVPTKKVAKTPHEMWTGKVPSLAHIKVWGCEAFVRRETQ 651

Query: 566  KKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI 625
             KL  RS+ CFF+GYPK+S G LFY P E+ +FV+  A F E + I      S + L+EI
Sbjct: 652  DKLAERSERCFFLGYPKQSFGYLFYRPSEDVVFVARRAVFRERELIFKEDSGSTIDLEEI 711

Query: 626  SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLGLI--ETQVVIPD 685
             +S+ D     T   ++  +     P+      RRSGRV   P+ Y   I  +    + D
Sbjct: 712  QESSDDATLGETS--NQHEEEVPVGPTDVSLPLRRSGRVSMPPEFYGFHITSDGDTFVSD 771

Query: 686  D---GIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYK 745
                 +++P  Y++A+   +  +W +AMD E++SMY N VW LVD     K +GCKWI+K
Sbjct: 772  RTLINLDEPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFK 831

Query: 746  RKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMD 805
            +K D  GKV TFKARLVAKG+TQ  GVDY+ETFSPVA +KSIRI+L+IA F+DYEIWQMD
Sbjct: 832  KKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMD 891

Query: 806  VKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYG 865
            VKTAFLNG L E +YM+QPEGF++     KVCKL++SIYGLKQASRSWN+ F   +K +G
Sbjct: 892  VKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFG 951

Query: 866  FEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQFQKRS------ 925
            F ++ DE CVY K    I+ FLVLYVDD+LL+GND+  L D+K WL   F  +       
Sbjct: 952  FSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAY 1011

Query: 926  --GRCTIRSRN---------------------PNCSKPY-----GIHLSKEQCPKTPQEV 985
              G   +R R                       N  K          LSK Q P T +E+
Sbjct: 1012 ILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEI 1071

Query: 986  EDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKD 1045
             +M  +PYASAVGS+MYAM CTRPD+ +++ MVSRYQ NPGR HW AVKNILKYLRRTK+
Sbjct: 1072 AEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKN 1131

Query: 1046 YMLMYGTKD-LILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEA 1078
             +L+ G  D L + GYTD+ FQTD+D+ +S SG VF LNGGAV W+S KQ  +ADST E+
Sbjct: 1132 MVLVLGGSDTLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCES 1191

[Close]
BLAST of CSPI02G15660 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 242.3 bits (617), Expect = 1.4e-63
Identity = 145/421 (34.44%), Postives = 225/421 (53.44%), Query Frame = 1 

Query: 687  EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 746
            ++P TY +A + +    W  AMD E+ +M     W +   P + KPIGCKW+YK K +  
Sbjct: 84   KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143

Query: 747  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 806
            G ++ +KARLVAKGYTQ+EG+D+ ETFSPV  L S++++L+I+  Y++ + Q+D+  AFL
Sbjct: 144  GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 203

Query: 807  NGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFE 866
            NG+L+E IYM  P G+  +  +      VC LKKSIYGLKQASR W ++F   +  +GF 
Sbjct: 204  NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 263

Query: 867  QNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQFQKRS-------- 926
            Q+  +   + K+   +   +++YVDD+++  N+   + ++K  L   F+ R         
Sbjct: 264  QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 323

Query: 927  GRCTIRSRN--PNCSKPYGIHLSKE---------QCPKTPQEVEDMRN-------IPYAS 986
            G    RS      C + Y + L  E           P  P       +         Y  
Sbjct: 324  GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRR 383

Query: 987  AVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTK-D 1046
             +G LMY  + TR DI ++V  +S++   P   H  AV  IL Y++ T    L Y ++ +
Sbjct: 384  LIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAE 443

Query: 1047 LILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAK 1077
            + L  ++D+ FQ+ KD R+ST+G    L    + W+S KQ  ++ S+ EAEY A   A  
Sbjct: 444  MQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATD 500

[Close]
BLAST of CSPI02G15660 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 82.0 bits (201), Expect = 2.4e-15
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 1 

Query: 687 EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 746
           ++P +   A+KD     W +AM  E++++  N  W LV  P +   +GCKW++K K    
Sbjct: 26  KEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSD 85

Query: 747 GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIA 790
           G +   KARLVAKG+ Q EG+ + ET+SPV    +IR +L++A
Sbjct: 86  GTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125

[Close]
BLAST of CSPI02G15660 vs. TAIR10
Match: ATMG00300.1 (ATMG00300.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 58.5 bits (140), Expect = 2.9e-08
Identity = 34/92 (36.96%), Postives = 47/92 (51.09%), Query Frame = 1 

Query: 309 LQQTAET--QNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLE 368
           LQ + ET   N  +       LWH RL H++   +  LVK G L   + +SL  CE C+ 
Sbjct: 50  LQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIY 109

Query: 369 GKMTKRSFTGKGLRAKGPLELVHSDLCGPMNV 399
           GK  + +F+      K PL+ VHSDL G  +V
Sbjct: 110 GKTHRVNFSTGQHTTKNPLDYVHSDLWGAPSV 141

[Close]
BLAST of CSPI02G15660 vs. NCBI nr
Match: gi|299474487|gb|ADJ18449.1| (gag/pol protein [Bryonia dioica])

HSP 1 Score: 1365.1 bits (3532), Expect = 0.0e+00
Identity = 672/805 (83.48%), Postives = 725/805 (90.06%), Query Frame = 1 

Query: 307  SQLQQTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLE 366
            +++ +T ETQNK+QKVSSNAYLWHLRLGHINLNRI RLVKSG+L+ LEDNSLPPCESCLE
Sbjct: 423  TEMFRTLETQNKKQKVSSNAYLWHLRLGHINLNRIERLVKSGILNQLEDNSLPPCESCLE 482

Query: 367  GKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHK 426
            GKMTKRSFTGKGLRAK PLELVHSDLCGPMNVKARGGYEYFISFIDD+SRYGH+YL+HHK
Sbjct: 483  GKMTKRSFTGKGLRAKVPLELVHSDLCGPMNVKARGGYEYFISFIDDFSRYGHVYLLHHK 542

Query: 427  SNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQN 486
            S S EKFKEYKAEVENE+GKTIK LRSDRGGEYMD +F+DYLIE GIQSQLSAPSTPQQN
Sbjct: 543  SESFEKFKEYKAEVENEIGKTIKTLRSDRGGEYMDSKFQDYLIEFGIQSQLSAPSTPQQN 602

Query: 487  GVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKG 546
            GVSERRNRTLLDMVRSM+S++Q+ DSFWGYALETA +ILNNVPSKSV ETPYELWKGRK 
Sbjct: 603  GVSERRNRTLLDMVRSMMSYAQLPDSFWGYALETAIHILNNVPSKSVLETPYELWKGRKS 662

Query: 547  SLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFL 606
            SLR+FRIWGCPAHVLVQNPKKLE RSKLC F+GYPKESRGGLFY PQENK+FVSTNATFL
Sbjct: 663  SLRYFRIWGCPAHVLVQNPKKLEPRSKLCLFVGYPKESRGGLFYHPQENKVFVSTNATFL 722

Query: 607  EEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVH 666
            EEDH R+HQPRSK+VLKE+ K+A DKPSSSTKVVDK   S QSH SQ+LR PRRSGRVVH
Sbjct: 723  EEDHXRNHQPRSKIVLKEMFKNATDKPSSSTKVVDKANISDQSHTSQELRVPRRSGRVVH 782

Query: 667  QPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQ 726
            QP+RYLGL+ETQ++IPDDG+EDPLTYKQAM DVDRDQWIKAM+LEMESMYFNSVWTLVD 
Sbjct: 783  QPNRYLGLVETQIIIPDDGVEDPLTYKQAMNDVDRDQWIKAMNLEMESMYFNSVWTLVDL 842

Query: 727  PNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 786
            P+DVKPIGCKWIYKRKRD AGKVQTFKARLVAKGYTQ+EGVDYEETFSPVAMLKSIRILL
Sbjct: 843  PSDVKPIGCKWIYKRKRDQAGKVQTFKARLVAKGYTQKEGVDYEETFSPVAMLKSIRILL 902

Query: 787  SIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASR 846
            SIATFY+YEIWQMDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASR
Sbjct: 903  SIATFYNYEIWQMDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASR 962

Query: 847  SWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWL 906
            SWNIRFDTAIKSYGFEQNVDEPCVYKK+VN ++AFL+LYVDD+LLIGNDV YLTD+KKWL
Sbjct: 963  SWNIRFDTAIKSYGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWL 1022

Query: 907  AMQFQKRS--------GRCTIRSRN---------------------PNCSK-----PYGI 966
              QFQ +         G   +R+R                       N  K      +GI
Sbjct: 1023 NTQFQMKDLGEAQYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGI 1082

Query: 967  HLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWT 1026
            HLSKEQCPKTPQEVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWT
Sbjct: 1083 HLSKEQCPKTPQEVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWT 1142

Query: 1027 AVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRS 1078
            AVKNILKYLRRT++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS
Sbjct: 1143 AVKNILKYLRRTRNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRS 1202

[Close]
BLAST of CSPI02G15660 vs. NCBI nr
Match: gi|1019597807|gb|AMY96445.1| (gag/pol protein [Momordica dioica])

HSP 1 Score: 1074.3 bits (2777), Expect = 1.7e-310
Identity = 549/808 (67.95%), Postives = 621/808 (76.86%), Query Frame = 1 

Query: 314  ETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRS 373
            ETQNK+Q   S  YLWHLRLGHINLNRI +L K GLL  LED SLPPCESCLEGKMTKR 
Sbjct: 437  ETQNKKQNNDSAMYLWHLRLGHINLNRIEKLHKDGLLEQLEDFSLPPCESCLEGKMTKRP 496

Query: 374  FTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKF 433
            FTGKGLRA   LEL+H+D+CGPM+VKARGGY+YF+SF DD SRYG++YL+ HKS S EKF
Sbjct: 497  FTGKGLRASDLLELIHTDVCGPMSVKARGGYQYFLSFTDDLSRYGYVYLLKHKSESFEKF 556

Query: 434  KEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRN 493
            KE++AEVENE+GK IK LRSDRGGEYM   F D+L E GI SQLSAP TPQ NGVSERRN
Sbjct: 557  KEFQAEVENEIGKKIKTLRSDRGGEYMSSEFGDHLREFGIVSQLSAPGTPQCNGVSERRN 616

Query: 494  RTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRI 553
            RTLLDMVRSM+S++ + DSFWGYA E    ILN VPSKSV ETPYELW GRK SL   +I
Sbjct: 617  RTLLDMVRSMMSYADLPDSFWGYARERERAILNRVPSKSVEETPYELWYGRKSSLSFLKI 676

Query: 554  WGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRD 613
            WGCPAHV    PKKLE RS+ C F+GYPKE+RG  FY PQENK+FV+TN  FLE++ +  
Sbjct: 677  WGCPAHVKKLQPKKLEPRSEKCLFVGYPKETRGYYFYHPQENKVFVATNEAFLEKEFLSR 736

Query: 614  HQPRSKLVLKEISKSAI-----DKPSSSTK-VVDKTR-KSGQSH--PSQQLREPRRSGRV 673
            HQP SK+VLK + +  I     DKPSSSTK VVDK      QSH    Q+LR PRRSGR 
Sbjct: 737  HQPGSKIVLKAVVEPLIPLDGTDKPSSSTKVVVDKAEVNDDQSHTPDQQELRVPRRSGRS 796

Query: 674  VHQPDRYLGLIETQVVIPDDGIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLV 733
               P+RYLGL+ETQ++I D+G EDP  YKQAM   D DQW+KAM+ EMESMY N VWTLV
Sbjct: 797  RRAPNRYLGLVETQIMILDNGEEDPTNYKQAMVGPDSDQWLKAMNSEMESMYDNKVWTLV 856

Query: 734  DQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 793
            D P+DVKPIGCKWIYK+KRD    V  FKARLVAKG+T+   + YEETFSPVAMLKSIRI
Sbjct: 857  DLPSDVKPIGCKWIYKKKRDQDSNVTVFKARLVAKGFTRSLSLSYEETFSPVAMLKSIRI 916

Query: 794  LLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQA 853
            +L+IA F+DYEIWQMDVKTAFLNGNLEESIYM QPEGF+ QDQEQK CKL+ SIYGLKQA
Sbjct: 917  ILAIAAFFDYEIWQMDVKTAFLNGNLEESIYMIQPEGFVAQDQEQKACKLQGSIYGLKQA 976

Query: 854  SRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKK 913
            SRSWNIRFD  IK++GF QNVDE CVYKK+   ++AFL+LYVDD+LLIGNDV YL D+KK
Sbjct: 977  SRSWNIRFDEVIKAFGFIQNVDESCVYKKISGSVVAFLILYVDDILLIGNDVEYLEDVKK 1036

Query: 914  WLAMQF-----------------QKRSGRCTIRSRNPNCSKPYG---------------- 973
            WL   F                 + RS +    S++    K                   
Sbjct: 1037 WLNTSFSMKDLGEAQYILGIRIYRDRSNKTIGMSQSTYIDKVLSRFKMQDSKKGLLPFRH 1096

Query: 974  -IHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDH 1033
             IHLSKEQCPKTPQEVEDMRNIPY+SA+GSLMYAMLCTRPD+CY++ +VSRYQSNPGRDH
Sbjct: 1097 GIHLSKEQCPKTPQEVEDMRNIPYSSAIGSLMYAMLCTRPDVCYALSIVSRYQSNPGRDH 1156

Query: 1034 WTAVKNILKYLRRTKDYMLMY-GTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVV 1078
            WTAVKNILKYLRRT++  L+Y G KDL + GYTDS FQTDKD  KS SG VFTLNGGAV 
Sbjct: 1157 WTAVKNILKYLRRTRNMFLVYGGDKDLAVKGYTDSSFQTDKDDSKSQSG-VFTLNGGAVS 1216

[Close]
BLAST of CSPI02G15660 vs. NCBI nr
Match: gi|2443320|dbj|BAA22288.1| (polyprotein [Oryza australiensis])

HSP 1 Score: 823.9 bits (2127), Expect = 3.2e-235
Identity = 426/786 (54.20%), Postives = 542/786 (68.96%), Query Frame = 1 

Query: 327  YLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPLE 386
            ++WH RLGHIN  R+ +L K GLL   +  S   CESCL GKMTK  FTG   RA   L 
Sbjct: 438  FIWHCRLGHINKKRMEKLHKDGLLHSFDFESFETCESCLLGKMTKAPFTGHSERASDLLA 497

Query: 387  LVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELGK 446
            LVH+D+CGPM+  ARGGY+YFI+F DD+SRYG+IYL+ HKS S EKFKE++ EV+N LGK
Sbjct: 498  LVHTDVCGPMSSTARGGYQYFITFTDDFSRYGYIYLMRHKSESFEKFKEFQNEVQNHLGK 557

Query: 447  TIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMISF 506
            TIK LRSDRGGEY+   F ++L + GI  QL+ P TPQ NGVSERRNRTLLDMVRSM+S 
Sbjct: 558  TIKFLRSDRGGEYVSQEFGNHLKDCGIVPQLTPPGTPQWNGVSERRNRTLLDMVRSMMSQ 617

Query: 507  SQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNPK 566
            S +  SFWGYALETAA  LN VPSKSV +TPYE+W G+  SL   +IWGC A+V      
Sbjct: 618  SDLPLSFWGYALETAALTLNRVPSKSVEKTPYEIWTGQPPSLSFLKIWGCEAYVKRLQSD 677

Query: 567  KLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEIS 626
            KL  +S  CF +GYPKE++G  FY+ ++ K+FV+ +  FLE++ +       ++ L+E+ 
Sbjct: 678  KLTPKSDKCFVVGYPKETKGYYFYNREQAKVFVARHGVFLEKEFLSRRVSGIRVHLEEVQ 737

Query: 627  KSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLGLIETQVVIPDDGI 686
            ++  +  S++T+   +      + P      PRRS R    PDRY G  +  +++ D+  
Sbjct: 738  ETP-ETVSATTE--PQQEDQSVAPPVVDTPAPRRSERSRRAPDRYTGAEQRDILLLDN-- 797

Query: 687  EDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHA 746
            ++P TY++AM   D ++W+ AM  E+ESMY N VW LVD P+ VK I CKW++K+K D  
Sbjct: 798  DEPKTYEEAMVGHDSNKWLGAMKSEIESMYDNQVWNLVDPPDGVKTIECKWLFKKKADMD 857

Query: 747  GKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFL 806
            G V  +KARLVAKG+ Q +GVDY+ETFSPVAMLKSIRI+L+IA ++DYEIWQMDVKTAFL
Sbjct: 858  GNVHIYKARLVAKGFKQIQGVDYDETFSPVAMLKSIRIILAIAAYFDYEIWQMDVKTAFL 917

Query: 807  NGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNVD 866
            NGNL E +YM QP+GF++ +   K+CKL+KSIYGLKQASRSWNIRFD  IK +GF +N +
Sbjct: 918  NGNLSEDVYMIQPQGFVDPESPGKICKLQKSIYGLKQASRSWNIRFDEVIKGFGFIKNEE 977

Query: 867  EPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQF---------------- 926
            E CVYKKV    I FL+LYVDD+LLIGND+  L  +K  L   F                
Sbjct: 978  EACVYKKVSGSAIVFLILYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRI 1037

Query: 927  -QKRSGRC-----------TIRSRNPNCSK------PYGIHLSKEQCPKTPQEVEDMRNI 986
             + RS R             ++  N + SK       +GI+LSK QCP+T  E   M  +
Sbjct: 1038 YRDRSKRLIGLSQSTYIDKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMV 1097

Query: 987  PYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY- 1046
            PYASA+GS+MYAMLCTRPD+ Y++   SRYQS+PG  HWTAVKNILKYLRRTKD  L+Y 
Sbjct: 1098 PYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYG 1157

Query: 1047 GTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAAC 1078
            G +DL+++GYTD+ FQTDKD  +S SG VF LNGGAV W+S KQ  +ADST EAEY+AA 
Sbjct: 1158 GEEDLVVSGYTDASFQTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIAAS 1217

[Close]
BLAST of CSPI02G15660 vs. NCBI nr
Match: gi|31126682|gb|AAP44605.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 813.1 bits (2099), Expect = 5.6e-232
Identity = 487/1126 (43.25%), Postives = 654/1126 (58.08%), Query Frame = 1 

Query: 2    NSSIVQLLASEKLNGDNYAAWKSNLNTILVVDDLRFVLTEECPQNPASNANRTSRDAYDR 61
            N ++  +L  EKL G N+  W  NL  +L  +   FVLTE  P N  +NA    R  +++
Sbjct: 8    NFNLRSILEKEKLTGTNFMDWYRNLRIVLRQEHKEFVLTEPFPANLPNNAPAAQRREHEK 67

Query: 62   WIKANEKARVYILASMSDVLAKKHESLATAKEIMDSLRGMFGQPEWSLRHEAVKYIYTKR 121
                       +LA+MS  L +++E+L  A  I+  LR MF     + R    K ++  R
Sbjct: 68   RCNDYLDISCLMLATMSPELQRQYEAL-DAHTIITGLRNMFEDQARAERFNTSKSLFACR 127

Query: 122  MKEGTSVREHVLDMMMHFNIAEVNGGPIEEVNQVSFILESLPKSFIPFQTNASLNKIEFN 181
            + EG  V  HV+ M+ +    +  G P+        IL+SLP SF PF  N ++N +   
Sbjct: 128  LAEGNLVSPHVIKMIGYTESLDKLGFPLSRELATDLILQSLPPSFEPFIMNFNMNNLNRT 187

Query: 182  LTTLLNELQRFQNLTMGKGKQVEANVATTKRKFIRGSSSKTKAGPSKPNA-QIKKKGKGK 241
            L  L   L+  +         V   +   KRK     ++K      K N+ +I      K
Sbjct: 188  LAELHGMLKTAEESIKKNSNHV---MVMHKRK----PNNKKSGQKRKLNSDEITSTSNSK 247

Query: 242  TPKQNKGKKAAEKGKCYHCGQN-GHWLRN----CPKYLAEKKGREGNTRKIVLGKSFQKA 301
            T  Q  G  +A+  +C+ C +  G+  R+    C  Y  +           +        
Sbjct: 248  TKVQKTG--SAKDAECFFCKETEGYGFRSVDNGCSVYYND-----------IFYFHAPMM 307

Query: 302  RSLSRLEQERWSQLQQTAETQNKRQKVSSNAYLWHLRLGHINLNRIGRLVKSGLLSPLED 361
              L  +  +  S     A+ Q  R    +  ++WH  LGHIN  RI +L + GLL   + 
Sbjct: 308  NGLYIVNLDGCSVYNINAKRQ--RPNNLNPTFIWHCCLGHINEKRIEKLHRDGLLHSFDF 367

Query: 362  NSLPPCESCLEGKMTKRSFTGKGLRAKGPLELVHSDLCGPMNVKARGGYEYFISFIDDYS 421
             S   CESCL GKMTK  FTG+  RA   L LVH+D+CGPM+  ARGG+ YFI+F D++S
Sbjct: 368  ESFKTCESCLLGKMTKAPFTGQSERASELLGLVHTDVCGPMSSTARGGFGYFITFTDEFS 427

Query: 422  RYGHIYLIHHKSNSLEKFKEYKAEVENELGKTIKILRSDRGGEYMDLRFRDYLIENGIQS 481
            RYG++YL+ HKS S EKF+E++ EV+N LGKTIK LRSDRGGEY+ L + ++L E GI  
Sbjct: 428  RYGYVYLMRHKSESFEKFQEFQNEVQNHLGKTIKYLRSDRGGEYLSLEYGNHLKECGIVP 487

Query: 482  QLSAPSTPQQNGVSERRNRTLLDMVRSMISFSQMSDSFWGYALETAAYILNNVPSKSVSE 541
            QL+ P TPQ N VSERRNR LLDMVRSM+S + M  SFWGYALETAA+ LN VPSKSV +
Sbjct: 488  QLTPPGTPQWNAVSERRNRILLDMVRSMMSQTDMPLSFWGYALETAAFTLNRVPSKSVDK 547

Query: 542  TPYELWKGRKGSLRHFRIWGCPAHVLVQNPKKLEHRSKLCFFIGYPKESRGGLFYDPQEN 601
            TPYE+W G++ SL   +IW C                         +E++G  FY+ +E 
Sbjct: 548  TPYEIWTGKRPSLSFLKIWCC-------------------------EETKGYYFYNREEG 607

Query: 602  KIFVSTNATFLEEDHIRDHQPRSKLVLKEISKSAIDKPSSSTKVVDKTRKSGQSHPSQQL 661
            K+FV+ +  FLE++ I      S + LKEI ++     ++ST    +  +       Q +
Sbjct: 608  KVFVARHGVFLEKEFISRKDSGSMVRLKEIQETP---ENASTSTQPQVEQDVVQQVEQVV 667

Query: 662  REP-------RRSGRVVHQPDRYLGLIETQ--VVIPDDGIEDPLTYKQAMKDVDRDQWIK 721
             EP       RRS R+   P RY  L   Q  +++ D+  ++P TY++AM   D ++W+ 
Sbjct: 668  VEPVVEAPASRRSERIRRTPARYALLTSGQRDILLLDN--DEPTTYEEAMVGPDTEKWLG 727

Query: 722  AMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYKRKRDHAGKVQTFKARLVAKGYTQREG 781
            AM  E+ESM+ N VW LVD P+ VK I CKWI+K+  D  G V  + ARLVAKG+ Q +G
Sbjct: 728  AMKSEIESMHVNQVWNLVDPPDGVKAIECKWIFKKMTDVDGTVHIYNARLVAKGFRQIQG 787

Query: 782  VDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGNLEESIYMSQPEGFIEQD 841
            VDY+ETFSPVAMLKSIRI+L+IA ++DYEIWQMDVKTAFLNGNL+E +YM+QP+GF++  
Sbjct: 788  VDYDETFSPVAMLKSIRIVLAIAAYFDYEIWQMDVKTAFLNGNLDEDVYMTQPKGFVDPQ 847

Query: 842  QEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNFIIAFLVLYV 901
              +K+CKL+KSIY LKQASRSWNIRFD  +K+ GF +N +EPCVYKK+    + FL+LYV
Sbjct: 848  SAKKICKLQKSIYRLKQASRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLILYV 907

Query: 902  DDVLLIGNDVGYLTDIKKWLAMQF-----------------QKRSGRCTIRSRNPNCSK- 961
            DD+LLIGND+  L  +K  L   F                 + RS R    S++    K 
Sbjct: 908  DDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYIDKV 967

Query: 962  ----------------PYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDI 1021
                             +GI+L K QCP+T  E   M  IPYASA+GS+MYAMLCTR D+
Sbjct: 968  LKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTRLDV 1027

Query: 1022 CYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYG-TKDLILTGYTDSDFQTDKD 1078
             Y++   SRYQS+ G  HW AVKNILKYLRRTKD  L+YG  ++L++ GYTD+ FQTDKD
Sbjct: 1028 SYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYGRQEELVVNGYTDASFQTDKD 1080

[Close]
BLAST of CSPI02G15660 vs. NCBI nr
Match: gi|595434714|gb|EXX50149.1| (gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w])

HSP 1 Score: 783.5 bits (2022), Expect = 4.8e-223
Identity = 409/792 (51.64%), Postives = 527/792 (66.54%), Query Frame = 1 

Query: 326  AYLWHLRLGHINLNRIGRLVKSGLLSPLEDNSLPPCESCLEGKMTKRSFTGKGLRAKGPL 385
            A LWH RLGHI+  RI +L K G+L   +  S   CESCL GKMTK  F G   R +G L
Sbjct: 412  ACLWHSRLGHISKKRIAQLQKDGVLESFDLKSDDVCESCLLGKMTKSPFKGSFERGEGLL 471

Query: 386  ELVHSDLCGPMNVKARGGYEYFISFIDDYSRYGHIYLIHHKSNSLEKFKEYKAEVENELG 445
            +++H+D+CGP     + G  ++++F DD+SRYG+IYLI HKS++ EKFKE+K EVEN+LG
Sbjct: 472  DIIHTDVCGPFRSTTKDGTRFYVTFTDDFSRYGYIYLIKHKSDTFEKFKEFKNEVENQLG 531

Query: 446  KTIKILRSDRGGEYMDLRFRDYLIENGIQSQLSAPSTPQQNGVSERRNRTLLDMVRSMIS 505
            + IK+LRSDRGGEY+ + F DYL E GI SQL+ P TPQ NGV+ERRNRTLLDMVRSM+S
Sbjct: 532  RKIKMLRSDRGGEYLSIEFLDYLKECGIVSQLTPPRTPQLNGVAERRNRTLLDMVRSMMS 591

Query: 506  FSQMSDSFWGYALETAAYILNNVPSKSVSETPYELWKGRKGSLRHFRIWGCPAHVLVQNP 565
             + +   FWGYALETAA+ILN VP+K V++TP+E+W G+  SL H ++WGC A V  +  
Sbjct: 592  RASLPIHFWGYALETAAHILNLVPTKKVAKTPHEMWTGKVPSLAHIKVWGCEAFVRRETQ 651

Query: 566  KKLEHRSKLCFFIGYPKESRGGLFYDPQENKIFVSTNATFLEEDHIRDHQPRSKLVLKEI 625
             KL  RS+ CFF+GYPK+S G LFY P E+ +FV+  A F E + I      S + L+EI
Sbjct: 652  DKLAERSERCFFLGYPKQSFGYLFYRPSEDVVFVARRAVFRERELIFKEDSGSTIDLEEI 711

Query: 626  SKSAIDKPSSSTKVVDKTRKSGQSHPSQQLREPRRSGRVVHQPDRYLGLI--ETQVVIPD 685
             +S+ D     T   ++  +     P+      RRSGRV   P+ Y   I  +    + D
Sbjct: 712  QESSDDATLGETS--NQHEEEVPVGPTDVSLPLRRSGRVSMPPEFYGFHITSDGDTFVSD 771

Query: 686  D---GIEDPLTYKQAMKDVDRDQWIKAMDLEMESMYFNSVWTLVDQPNDVKPIGCKWIYK 745
                 +++P  Y++A+   +  +W +AMD E++SMY N VW LVD     K +GCKWI+K
Sbjct: 772  RTLINLDEPANYQEAVAGPESAKWKEAMDSEIKSMYDNQVWNLVDNVPGRKTVGCKWIFK 831

Query: 746  RKRDHAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMD 805
            +K D  GKV TFKARLVAKG+TQ  GVDY+ETFSPVA +KSIRI+L+IA F+DYEIWQMD
Sbjct: 832  KKTDMDGKVHTFKARLVAKGFTQTPGVDYDETFSPVAKIKSIRIMLAIAAFHDYEIWQMD 891

Query: 806  VKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYG 865
            VKTAFLNG L E +YM+QPEGF++     KVCKL++SIYGLKQASRSWN+ F   +K +G
Sbjct: 892  VKTAFLNGKLTEDVYMNQPEGFVDAKYPNKVCKLERSIYGLKQASRSWNLCFHEKVKEFG 951

Query: 866  FEQNVDEPCVYKKVVNFIIAFLVLYVDDVLLIGNDVGYLTDIKKWLAMQFQKRS------ 925
            F ++ DE CVY K    I+ FLVLYVDD+LL+GND+  L D+K WL   F  +       
Sbjct: 952  FSRSEDESCVYVKASGSIVTFLVLYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAY 1011

Query: 926  --GRCTIRSRN---------------------PNCSKPY-----GIHLSKEQCPKTPQEV 985
              G   +R R                       N  K          LSK Q P T +E+
Sbjct: 1012 ILGIRILRDRKKRLIGLSQGTYLEKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEI 1071

Query: 986  EDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKD 1045
             +M  +PYASAVGS+MYAM CTRPD+ +++ MVSRYQ NPGR HW AVKNILKYLRRTK+
Sbjct: 1072 AEMSRVPYASAVGSIMYAMTCTRPDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKN 1131

Query: 1046 YMLMYGTKD-LILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEA 1078
             +L+ G  D L + GYTD+ FQTD+D+ +S SG VF LNGGAV W+S KQ  +ADST E+
Sbjct: 1132 MVLVLGGSDTLRVEGYTDASFQTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCES 1191

The following BLAST results are available for this feature:
BLAST of CSPI02G15660 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC1.5e-16340.02Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME1.9e-6230.18Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
YCH4_YEAST4.2e-2528.99Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
YL21B_YEAST7.8e-2426.67Transposon Ty2-LR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YO22B_YEAST1.0e-2326.42Transposon Ty2-OR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of CSPI02G15660 vs. TrEMBL
Match NameE-valueIdentityDescription
E2GK51_BRYDI0.0e+0083.48Gag/pol protein (Fragment) OS=Bryonia dioica PE=4 SV=1[more]
A0A165U314_9ROSI1.2e-31067.95Gag/pol protein OS=Momordica dioica PE=4 SV=1[more]
O23864_9ORYZ2.2e-23554.20Polyprotein OS=Oryza australiensis PE=4 SV=1[more]
Q7Y1M7_ORYSJ3.9e-23243.25Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0053G10.9 PE=4 SV=... [more]
A0A015J5I9_9GLOM3.3e-22351.64Gag-pol fusion protein OS=Rhizophagus irregularis DAOM 197198w GN=RirG_273610 PE... [more]
BLAST of CSPI02G15660 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.11.4e-6334.44 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.12.4e-1538.83ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00300.12.9e-0836.96ATMG00300.1 Gag-Pol-related retrotransposon family protein[more]
BLAST of CSPI02G15660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|299474487|gb|ADJ18449.1|0.0e+0083.48gag/pol protein [Bryonia dioica][more]
gi|1019597807|gb|AMY96445.1|1.7e-31067.95gag/pol protein [Momordica dioica][more]
gi|2443320|dbj|BAA22288.1|3.2e-23554.20polyprotein [Oryza australiensis][more]
gi|31126682|gb|AAP44605.1|5.6e-23243.25putative polyprotein [Oryza sativa Japonica Group][more]
gi|595434714|gb|EXX50149.1|4.8e-22351.64gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR001878Znf_CCHC
IPR012337RNaseH-like_sf
IPR013103RVT_2
IPR025724GAG-pre-integrase_dom
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G15660.1CSPI02G15660.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 383..499
score: 5.7
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 380..545
score: 23
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 248..271
score: 1.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 254..271
score: 1.
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 255..271
score: 4.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 255..271
score: 10
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 236..274
score: 4.8
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 380..538
score: 2.8
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 379..539
score: 4.55
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 718..911
score: 3.6
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 315..369
score: 1.2
NoneNo IPR availableunknownCoilCoilcoord: 175..195
scor
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 687..1077
score: 0.0coord: 12..669
score:
NoneNo IPR availablePANTHERPTHR11439:SF192SUBFAMILY NOT NAMEDcoord: 687..1077
score: 0.0coord: 12..669
score:
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 62..191
score: 7.7
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 718..1075
score: 4.89

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G15660Cucurbita maxima (Rimu)cmacpiB548
CSPI02G15660Cucurbita maxima (Rimu)cmacpiB589
CSPI02G15660Cucurbita moschata (Rifu)cmocpiB537
CSPI02G15660Cucurbita moschata (Rifu)cmocpiB578
CSPI02G15660Cucumber (Chinese Long) v2cpicuB065
CSPI02G15660Melon (DHL92) v3.5.1cpimeB100
CSPI02G15660Watermelon (Charleston Gray)cpiwcgB130
CSPI02G15660Watermelon (97103) v1cpiwmB143
CSPI02G15660Cucurbita pepo (Zucchini)cpecpiB270
CSPI02G15660Cucurbita pepo (Zucchini)cpecpiB715
CSPI02G15660Bottle gourd (USVL1VR-Ls)cpilsiB091
CSPI02G15660Melon (DHL92) v3.6.1cpimedB092
CSPI02G15660Cucumber (Gy14) v2cgybcpiB056
CSPI02G15660Silver-seed gourdcarcpiB0753
CSPI02G15660Silver-seed gourdcarcpiB1092
CSPI02G15660Cucumber (Chinese Long) v3cpicucB080
CSPI02G15660Watermelon (97103) v2cpiwmbB122
CSPI02G15660Wax gourdcpiwgoB175
CSPI02G15660Cucumber (Gy14) v1cgycpiB374