CSPI02G14550 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G14550
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 14322875 .. 14323495 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCATAGTTGAAGAACCTGCGGAGGTTGGGGACGTTGACTATGGTTCTTTCTTTGTATCAATGGCTTTAGAGGAGTTTCGATGTGTTGTACAAGACATGGAAAATGCTGATTATGGTAAATATATATAAACTTACATCGAAGTTTTGTAAGGAATTTTTTTTAATGTTTTGTTAATTTGGATCACAGTTCATGTTACTATTACGAGTTCACAAATCAAATTTGTGGCTCCAGTTGATCATTGGGAAACTAGTTTTACCACCCAGGTATTTTCTTCAATTTTAGTATATATATATATATATATATATGTTGTAATTTGAGCAAATCTTATATTTAGCTTCTTATAATCTTTTATCAAAATGATCAAATTCATTTGCATGACATTGCTTTTGTAGGAAGGAAAATGCATAATTGGAGGTATTGAAGAAGGAGAAGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATACCAATGGTTTGCTTTTGATTGCTCCTATGGGAGTTTATACTCATATTTCTTCATTTTTTCCCCAAGATATACCTAATGGAGGAAATACATCGACCTGA

mRNA sequence

ATGTCCATAGTTGAAGAACCTGCGGAGGTTGGGGACGTTGACTATGGTTCTTTCTTTGTATCAATGGCTTTAGAGGAGTTTCGATGTGTTGTACAAGACATGGAAAATGCTGATTATGTTCATGTTACTATTACGAGTTCACAAATCAAATTTGTGGCTCCAGTTGATCATTGGGAAACTAGTTTTACCACCCAGGAAGGAAAATGCATAATTGGAGGTATTGAAGAAGGAGAAGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATACCAATGGTTTGCTTTTGATTGCTCCTATGGGAGTTTATACTCATATTTCTTCATTTTTTCCCCAAGATATACCTAATGGAGGAAATACATCGACCTGA

Coding sequence (CDS)

ATGTCCATAGTTGAAGAACCTGCGGAGGTTGGGGACGTTGACTATGGTTCTTTCTTTGTATCAATGGCTTTAGAGGAGTTTCGATGTGTTGTACAAGACATGGAAAATGCTGATTATGTTCATGTTACTATTACGAGTTCACAAATCAAATTTGTGGCTCCAGTTGATCATTGGGAAACTAGTTTTACCACCCAGGAAGGAAAATGCATAATTGGAGGTATTGAAGAAGGAGAAGAAATTAAATGTGGAATTAGTCTTTATCCAATGGAATTTTACAAAGCTTTCACATCAAAAAGAGTTTGGTTTTTCAGTTCATGTGATACCAATGGTTTGCTTTTGATTGCTCCTATGGGAGTTTATACTCATATTTCTTCATTTTTTCCCCAAGATATACCTAATGGAGGAAATACATCGACCTGA
Homology
[Close]
BLAST of CSPI02G14550 vs. TrEMBL
Match: A0A0A0LJU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-75
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 1 

Query: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDHWET 60
           MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYV VTITSSQIKFVAPVDHWET
Sbjct: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWET 60

Query: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120
           SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY
Sbjct: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 121 THISSFFPQDIPNGGNTST 140
           THISSFFPQDIPNGGNTST
Sbjct: 121 THISSFFPQDIPNGGNTST 139

[Close]
BLAST of CSPI02G14550 vs. TrEMBL
Match: A0A0A0LMQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.0e-60
Identity = 117/140 (83.57%), Postives = 125/140 (89.29%), Query Frame = 1 

Query: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDH-WE 60
           MSIVEE A VGDVDYGSFFVSMAL++FRCVVQDME++DYV +TI SSQI FV  VDH WE
Sbjct: 1   MSIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFV--VDHDWE 60

Query: 61  TSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGV 120
           TSFT +EG+CIIGGIEEG+EI CGIS YPMEFYK FTSKRVWFFSSCDTNGLLLIAPMGV
Sbjct: 61  TSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGV 120

Query: 121 YTHISSFFPQDIPNGGNTST 140
           YTHISSFFPQDI  GGNT T
Sbjct: 121 YTHISSFFPQDISIGGNTLT 138

[Close]
BLAST of CSPI02G14550 vs. TrEMBL
Match: A0A0A0LQ10_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.1e-25
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61

Query: 119 GVYTHISSFFPQDIPNG 135
           G+YTHISSF P DI  G
Sbjct: 62  GLYTHISSFSPHDIYGG 78

[Close]
BLAST of CSPI02G14550 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 8.1e-13
Identity = 44/113 (38.94%), Postives = 65/113 (57.52%), Query Frame = 1 

Query: 17  SFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDHWETSFTTQEGKCIIGGIEE 76
           S FVSM  ++F  ++      D VHVTITS ++ F       ET  + Q G+CIIGG+  
Sbjct: 137 SVFVSMDSQQFSNLISQYHMFDDVHVTITSERVIFSYSTMQ-ETILSPQNGQCIIGGLRA 196

Query: 77  GEEIKCGISLYPMEFYKAFTS--KRVWFFSSCDTNGLLLIAPMGVYTHISSFF 128
            +E++  I+L P E +    S  KRVWFF  C++N  L+ AP+G+   + +FF
Sbjct: 197 PDEVEFVITLGPQEVFNHIASQTKRVWFFKQCNSNRGLITAPLGLNARLVAFF 248

[Close]
BLAST of CSPI02G14550 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 4.0e-12
Identity = 43/126 (34.13%), Postives = 70/126 (55.56%), Query Frame = 1 

Query: 4   VEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDHWETSFT 63
           V  P  +G +D  S FVSM  EEF  ++ +    DYV V ITS ++ F   +   ET  T
Sbjct: 127 VVRPLRIGQIDL-SAFVSMDSEEFSNIISEYHMFDYVEVIITSRRVSFSYAIIQ-ETIIT 186

Query: 64  TQEGKCIIGGIEEGEEIKCGISLYPME--FYKAFTSKRVWFFSSCDTNGLLLIAPMGVYT 123
            ++G+C+IGG+    +++  I++      F+ A  SKR+W F   ++   ++ AP+G+Y 
Sbjct: 187 PEDGQCLIGGVRAPNQVQFIITMSQPNAFFHFASQSKRIWLFKEVNSTKGIITAPLGLYG 246

Query: 124 HISSFF 128
            + SFF
Sbjct: 247 RLVSFF 250

[Close]
BLAST of CSPI02G14550 vs. NCBI nr
Match: gi|700206914|gb|KGN62033.1| (hypothetical protein Csa_2G287150 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 2.8e-75
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 1 

Query: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDHWET 60
           MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYV VTITSSQIKFVAPVDHWET
Sbjct: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVRVTITSSQIKFVAPVDHWET 60

Query: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120
           SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY
Sbjct: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 121 THISSFFPQDIPNGGNTST 140
           THISSFFPQDIPNGGNTST
Sbjct: 121 THISSFFPQDIPNGGNTST 139

[Close]
BLAST of CSPI02G14550 vs. NCBI nr
Match: gi|659116192|ref|XP_008457954.1| (PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo])

HSP 1 Score: 248.4 bits (633), Expect = 7.2e-63
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 1 

Query: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDHWET 60
           MSIV EP +VGDVDYGSFFVSMALEEFRCVV DMENA YV VTITSS+IKFVA +DHWET
Sbjct: 1   MSIVAEPVDVGDVDYGSFFVSMALEEFRCVVNDMENAAYVPVTITSSRIKFVALIDHWET 60

Query: 61  SFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120
           SFTT+EG+CIIGGIEEG+EIKCGISLYPM+FYKAFTSKRVWFFSSCDTNGLLLIAPMGVY
Sbjct: 61  SFTTKEGECIIGGIEEGQEIKCGISLYPMKFYKAFTSKRVWFFSSCDTNGLLLIAPMGVY 120

Query: 121 THISSFFPQDI 132
           THISSFFPQ+I
Sbjct: 121 THISSFFPQEI 131

[Close]
BLAST of CSPI02G14550 vs. NCBI nr
Match: gi|700206913|gb|KGN62032.1| (hypothetical protein Csa_2G287140 [Cucumis sativus])

HSP 1 Score: 239.2 bits (609), Expect = 4.4e-60
Identity = 117/140 (83.57%), Postives = 125/140 (89.29%), Query Frame = 1 

Query: 1   MSIVEEPAEVGDVDYGSFFVSMALEEFRCVVQDMENADYVHVTITSSQIKFVAPVDH-WE 60
           MSIVEE A VGDVDYGSFFVSMAL++FRCVVQDME++DYV +TI SSQI FV  VDH WE
Sbjct: 1   MSIVEEHANVGDVDYGSFFVSMALDDFRCVVQDMEDSDYVPITIRSSQINFV--VDHDWE 60

Query: 61  TSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGV 120
           TSFT +EG+CIIGGIEEG+EI CGIS YPMEFYK FTSKRVWFFSSCDTNGLLLIAPMGV
Sbjct: 61  TSFTAKEGECIIGGIEEGDEINCGISFYPMEFYKGFTSKRVWFFSSCDTNGLLLIAPMGV 120

Query: 121 YTHISSFFPQDIPNGGNTST 140
           YTHISSFFPQDI  GGNT T
Sbjct: 121 YTHISSFFPQDISIGGNTLT 138

[Close]
BLAST of CSPI02G14550 vs. NCBI nr
Match: gi|700206917|gb|KGN62036.1| (hypothetical protein Csa_2G287180 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 5.9e-25
Identity = 58/77 (75.32%), Postives = 64/77 (83.12%), Query Frame = 1 

Query: 59  ETSFTTQEGKCIIGGIEEGEEIKCGISLYPMEFYKAFTSKRVW-FFSSCDTNGLLLIAPM 118
           E   TT+EG+CIIGG EEG+EIKCGISLYPMEFYKAFTSK VW  F+S D NG+LLIAPM
Sbjct: 2   EVILTTKEGECIIGGTEEGDEIKCGISLYPMEFYKAFTSKGVWLLFNSYDPNGMLLIAPM 61

Query: 119 GVYTHISSFFPQDIPNG 135
           G+YTHISSF P DI  G
Sbjct: 62  GLYTHISSFSPHDIYGG 78

[Close]
BLAST of CSPI02G14550 vs. NCBI nr
Match: gi|659116009|ref|XP_008457852.1| (PREDICTED: uncharacterized protein LOC103497437 [Cucumis melo])

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-18
Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 1 

Query: 11  GDVDYGSFFVSMALEEFRCVVQDMENAD-YVHVTITSSQIKFVAPVDHWETSFTTQEGKC 70
           G + YG F VS+ L +FR VV   +N   +V   +T S+ KF  P    E  FT +   C
Sbjct: 31  GKIGYGPF-VSLELHDFRNVVLIFDNTKTHVPFRVTISEFKFFLPDK--EIIFTNERDGC 90

Query: 71  IIGGIEEGEEIKCGISLYPMEFYKAFTSKRVWFFSSCDTNGLLLIAPMGVYTHISSFFPQ 130
           IIGGI EGEE +  + L P+E Y  FTSKR+W F S D  G+ L+AP G+Y +IS+FFPQ
Sbjct: 91  IIGGIREGEEWRGAMCLNPIEGYFNFTSKRLWLFESYDPIGVTLVAPFGLYVNISTFFPQ 147

The following BLAST results are available for this feature:
BLAST of CSPI02G14550 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G14550 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJU4_CUCSA2.0e-7599.28Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287150 PE=4 SV=1[more]
A0A0A0LMQ7_CUCSA3.0e-6083.57Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287140 PE=4 SV=1[more]
A0A0A0LQ10_CUCSA4.1e-2575.32Uncharacterized protein OS=Cucumis sativus GN=Csa_2G287180 PE=4 SV=1[more]
A0A0A0LIF2_CUCSA8.1e-1338.94Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1[more]
A0A0A0KFM5_CUCSA4.0e-1234.13Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1[more]
BLAST of CSPI02G14550 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G14550 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206914|gb|KGN62033.1|2.8e-7599.28hypothetical protein Csa_2G287150 [Cucumis sativus][more]
gi|659116192|ref|XP_008457954.1|7.2e-6389.31PREDICTED: uncharacterized protein LOC103497518 [Cucumis melo][more]
gi|700206913|gb|KGN62032.1|4.4e-6083.57hypothetical protein Csa_2G287140 [Cucumis sativus][more]
gi|700206917|gb|KGN62036.1|5.9e-2575.32hypothetical protein Csa_2G287180 [Cucumis sativus][more]
gi|659116009|ref|XP_008457852.1|1.9e-1846.67PREDICTED: uncharacterized protein LOC103497437 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G14550.1CSPI02G14550.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G14550Cucumber (Chinese Long) v2cpicuB065
CSPI02G14550Melon (DHL92) v3.5.1cpimeB098
CSPI02G14550Melon (DHL92) v3.5.1cpimeB155
CSPI02G14550Watermelon (Charleston Gray)cpiwcgB125
CSPI02G14550Watermelon (97103) v1cpiwmB142
CSPI02G14550Cucurbita pepo (Zucchini)cpecpiB270
CSPI02G14550Cucurbita pepo (Zucchini)cpecpiB712
CSPI02G14550Bottle gourd (USVL1VR-Ls)cpilsiB091
CSPI02G14550Melon (DHL92) v3.6.1cpimedB090
CSPI02G14550Cucumber (Gy14) v2cgybcpiB056
CSPI02G14550Silver-seed gourdcarcpiB1030
CSPI02G14550Silver-seed gourdcarcpiB1093
CSPI02G14550Cucumber (Chinese Long) v3cpicucB080
CSPI02G14550Watermelon (97103) v2cpiwmbB117
CSPI02G14550Wax gourdcpiwgoB172
CSPI02G14550Wax gourdcpiwgoB180
CSPI02G14550Wax gourdcpiwgoB185
CSPI02G14550Cucumber (Gy14) v1cgycpiB542
CSPI02G14550Cucurbita maxima (Rimu)cmacpiB548
CSPI02G14550Cucurbita maxima (Rimu)cmacpiB587
CSPI02G14550Cucurbita moschata (Rifu)cmocpiB537
CSPI02G14550Cucurbita moschata (Rifu)cmocpiB576