CSPI02G13660 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCGGCTGAGGACATGGGCTGTACCTACGTTGAGTGGCCCATTGCATCTGATTCTGTTGACTTCTTTTCAATCAAAAGTGTGAATTTCAAAACCCTTTCTCCTGAAACTTGAAAACCCTAGCCTCAACCCTCCACCGTCAAGCTCCGACACGCCGCCTCCCCTTCCCGGACCTCTTCCCTTCTCTTTCATTAATGTCTTTCTTCACTGGCGGCGGAAGATTCCGTGAGCTTCTTAAGAAGTACGGAAAAGTCGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTTGAATCACTACTCGATAAGCTACATATGGATCGATTCTTCTCTAAAGATCAGCCGCAGATAAATCCCTCGGAAGCCACATCGTCCGTAGACGACGGATTTATGAACGAAGAAAGATCCGCTTCGGAAATTCAACCGACAAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCGTTACTGCCTATTCGGATCCCAATAACGATTGCATTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTGAGGAACTGAATCCATCTCATTTCTTCTTCTTCGTGGATTTGCTGCTTCTTGAGATCAACAGAGTACTGTGATTCATTTTCTACTTTTTCTTTCGAGAATCAATTTTTTTTTTCAAGAAAGATTTACGACAGATTTTGAGAAGATAATTGTGTTCACATTGTCAAAATATAAATAAAAACCTCACCCTTAGTACTTATCTTGTTCTTGTTCTTCCGTTTTG ATGTCTTTCTTCACTGGCGGCGGAAGATTCCGTGAGCTTCTTAAGAAGTACGGAAAAGTCGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTTGAATCACTACTCGATAAGCTACATATGGATCGATTCTTCTCTAAAGATCAGCCGCAGATAAATCCCTCGGAAGCCACATCGTCCGTAGACGACGGATTTATGAACGAAGAAAGATCCGCTTCGGAAATTCAACCGACAAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCGTTACTGCCTATTCGGATCCCAATAACGATTGCATTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTGA ATGTCTTTCTTCACTGGCGGCGGAAGATTCCGTGAGCTTCTTAAGAAGTACGGAAAAGTCGCAATTGGAGTTCATTTCTCAGTATCGGGGGCTTCGATCACTGGCCTCTATGTCGCCATCAAGAACAATGTCGATGTTGAATCACTACTCGATAAGCTACATATGGATCGATTCTTCTCTAAAGATCAGCCGCAGATAAATCCCTCGGAAGCCACATCGTCCGTAGACGACGGATTTATGAACGAAGAAAGATCCGCTTCGGAAATTCAACCGACAAGGAATCGTACCGCCGAACTTGCAGCGTCGACTGGCGGTGCGTTGGCTTTGGCTGTGCTTTGCAACAAAGCGTTACTGCCTATTCGGATCCCAATAACGATTGCATTAACGCCGCCGATTGCGAGGTTGCTGGCGAGGCGAGGGATTGTGAGAAGTGGTTGA
BLAST of CSPI02G13660 vs. TrEMBL
Match: A0A0A0LJH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270860 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 2.3e-71 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G13660 vs. TrEMBL
Match: W9RV08_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002681 PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.5e-41 Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = 1
BLAST of CSPI02G13660 vs. TrEMBL
Match: M5VKM5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012877mg PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 4.3e-41 Identity = 97/153 (63.40%), Postives = 114/153 (74.51%), Query Frame = 1
BLAST of CSPI02G13660 vs. TrEMBL
Match: B9HR47_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13840g PE=4 SV=2) HSP 1 Score: 174.5 bits (441), Expect = 9.6e-41 Identity = 94/139 (67.63%), Postives = 110/139 (79.14%), Query Frame = 1
BLAST of CSPI02G13660 vs. TrEMBL
Match: A0A061DZ00_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006600 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.8e-40 Identity = 97/141 (68.79%), Postives = 110/141 (78.01%), Query Frame = 1
BLAST of CSPI02G13660 vs. TAIR10
Match: AT2G20940.1 (AT2G20940.1 Protein of unknown function (DUF1279)) HSP 1 Score: 142.9 bits (359), Expect = 1.6e-34 Identity = 79/137 (57.66%), Postives = 99/137 (72.26%), Query Frame = 1
BLAST of CSPI02G13660 vs. NCBI nr
Match: gi|449458630|ref|XP_004147050.1| (PREDICTED: uncharacterized protein LOC101221163 [Cucumis sativus]) HSP 1 Score: 276.2 bits (705), Expect = 3.4e-71 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1
BLAST of CSPI02G13660 vs. NCBI nr
Match: gi|659115735|ref|XP_008457709.1| (PREDICTED: uncharacterized protein LOC103497342 [Cucumis melo]) HSP 1 Score: 269.6 bits (688), Expect = 3.1e-69 Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 1
BLAST of CSPI02G13660 vs. NCBI nr
Match: gi|1009150688|ref|XP_015893154.1| (PREDICTED: uncharacterized protein LOC107427286 [Ziziphus jujuba]) HSP 1 Score: 178.3 bits (451), Expect = 9.5e-42 Identity = 99/150 (66.00%), Postives = 119/150 (79.33%), Query Frame = 1
BLAST of CSPI02G13660 vs. NCBI nr
Match: gi|694404079|ref|XP_009376938.1| (PREDICTED: uncharacterized protein LOC103965589 [Pyrus x bretschneideri]) HSP 1 Score: 176.8 bits (447), Expect = 2.8e-41 Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 1
BLAST of CSPI02G13660 vs. NCBI nr
Match: gi|703123710|ref|XP_010102883.1| (hypothetical protein L484_002681 [Morus notabilis]) HSP 1 Score: 176.4 bits (446), Expect = 3.6e-41 Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |