CSPI02G13040 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGACTGCACACGTCATGA ATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGACTGCACACGTCATGA ATGGGAATTCGTCTACAATCGATTCTTCTCAACGCCAAGCAGATTTTGAAAATGCAAGCTATGTCAGCCAGAAATCAATCTGATGTTCCCAAAGGCCATATTGCAGTTTACGTGGGAGAGATTCAAAGGAAGAGATTTGTCGTCCCTATATCATACTTGAAGCATCCTTCTTTTGTAGATCTGCTCAATAGATCAGAAGAAGAATTTGGATTTTGCCACCCAATGGGCGGCTTGACGATTCCATGCCGAGAGGATGCTTTCATAAATCTCACTGCCAGACTGCACACGTCATGA
BLAST of CSPI02G13040 vs. Swiss-Prot
Match: SAU23_ARATH (Auxin-responsive protein SAUR23 OS=Arabidopsis thaliana GN=SAUR23 PE=2 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 9.3e-25 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1
BLAST of CSPI02G13040 vs. Swiss-Prot
Match: SAU19_ARATH (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana GN=SAUR19 PE=2 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.7e-24 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1
BLAST of CSPI02G13040 vs. Swiss-Prot
Match: SAU21_ARATH (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana GN=SAUR21 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24 Identity = 55/86 (63.95%), Postives = 65/86 (75.58%), Query Frame = 1
BLAST of CSPI02G13040 vs. Swiss-Prot
Match: SAU20_ARATH (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana GN=SAUR20 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.5e-24 Identity = 55/85 (64.71%), Postives = 65/85 (76.47%), Query Frame = 1
BLAST of CSPI02G13040 vs. Swiss-Prot
Match: SAU24_ARATH (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana GN=SAUR24 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 6.0e-24 Identity = 55/86 (63.95%), Postives = 66/86 (76.74%), Query Frame = 1
BLAST of CSPI02G13040 vs. TrEMBL
Match: A0A0A0LPJ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258820 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.2e-47 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of CSPI02G13040 vs. TrEMBL
Match: A0A0A0LM74_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258830 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.0e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1
BLAST of CSPI02G13040 vs. TrEMBL
Match: A0A0A0LJ03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258810 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 2.9e-41 Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 1
BLAST of CSPI02G13040 vs. TrEMBL
Match: A0A0A0LPH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258670 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.1e-36 Identity = 72/97 (74.23%), Postives = 88/97 (90.72%), Query Frame = 1
BLAST of CSPI02G13040 vs. TrEMBL
Match: A0A0A0LPG7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G258620 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 6.2e-36 Identity = 74/97 (76.29%), Postives = 87/97 (89.69%), Query Frame = 1
BLAST of CSPI02G13040 vs. TAIR10
Match: AT2G21210.1 (AT2G21210.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 119.0 bits (297), Expect = 1.6e-27 Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 1
BLAST of CSPI02G13040 vs. TAIR10
Match: AT4G38840.1 (AT4G38840.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 117.1 bits (292), Expect = 6.2e-27 Identity = 56/99 (56.57%), Postives = 74/99 (74.75%), Query Frame = 1
BLAST of CSPI02G13040 vs. TAIR10
Match: AT4G34810.1 (AT4G34810.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26 Identity = 57/101 (56.44%), Postives = 76/101 (75.25%), Query Frame = 1
BLAST of CSPI02G13040 vs. TAIR10
Match: AT5G18060.1 (AT5G18060.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.0 bits (284), Expect = 5.2e-26 Identity = 56/87 (64.37%), Postives = 67/87 (77.01%), Query Frame = 1
BLAST of CSPI02G13040 vs. TAIR10
Match: AT5G18010.1 (AT5G18010.1 SAUR-like auxin-responsive protein family ) HSP 1 Score: 112.5 bits (280), Expect = 1.5e-25 Identity = 54/86 (62.79%), Postives = 65/86 (75.58%), Query Frame = 1
BLAST of CSPI02G13040 vs. NCBI nr
Match: gi|700206767|gb|KGN61886.1| (hypothetical protein Csa_2G258820 [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 1.7e-47 Identity = 96/97 (98.97%), Postives = 97/97 (100.00%), Query Frame = 1
BLAST of CSPI02G13040 vs. NCBI nr
Match: gi|778669614|ref|XP_011649278.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis sativus]) HSP 1 Score: 196.8 bits (499), Expect = 1.7e-47 Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 1
BLAST of CSPI02G13040 vs. NCBI nr
Match: gi|778669611|ref|XP_011649277.1| (PREDICTED: auxin-induced protein X15-like [Cucumis sativus]) HSP 1 Score: 192.2 bits (487), Expect = 4.3e-46 Identity = 94/97 (96.91%), Postives = 95/97 (97.94%), Query Frame = 1
BLAST of CSPI02G13040 vs. NCBI nr
Match: gi|659115604|ref|XP_008457639.1| (PREDICTED: auxin-induced protein 15A-like [Cucumis melo]) HSP 1 Score: 192.2 bits (487), Expect = 4.3e-46 Identity = 93/97 (95.88%), Postives = 95/97 (97.94%), Query Frame = 1
BLAST of CSPI02G13040 vs. NCBI nr
Match: gi|700206766|gb|KGN61885.1| (hypothetical protein Csa_2G258810 [Cucumis sativus]) HSP 1 Score: 175.6 bits (444), Expect = 4.1e-41 Identity = 83/90 (92.22%), Postives = 86/90 (95.56%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |