CSPI02G12250 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGCTTGTTCTTTGAAGGAAAAGTGAGAACTAAAATATTTAGCGTTTAATAGACTAAGATATAAAGATTAAGGAGTAAGATAGAATTTTAACTTATTAAATTATGTACTAAAGTGTGTAATGAGTGTGTGCAATTATGGTAGATAAACTTGGGCACCTGGAAAAGTATTTTTCACAAAGGCAAAAGTAATTTGTTATAATCTATAGAGTATACAACACAGCCAACCTTGAACGAACAATCAAACACATATTTTCTTCAGCATTGGCGGCTCTAGAAAGCAAATAGACCAAACTCACCACCAACTCTGATTCCGGCCACCATTTTAAATCCCCAATCATCACCCTATTTACGGTCTCTTCGATTCAATTCCACAATCCAAACATACGCACTAAAACTAACCCCAAATCCCATTCATACCTTTTGATCCACTTGTTTCTCCATTTCCATGGATACATTAGAGGAGGAAGAAGAATACAACTGGAGAGAAGTGCGGCTTCCCTCGCTTATCCCAGTGGTGCCGGAGCCTGAGCTAGAGAGAGAGACGGCGGAGAGACGCCGTGGCCGAGACATCCTTATCGCCGTCGATCATGGTCCCAACAGCAAGCACGCTTTCGATTGGGCTTTGATCCATTTCTGCCGCCTCGCTGACACCATCCATTTAGTCCACGCCGTTTCCAGTAATAAATTCCTCAAAACCCTTTAATATAATCAACCCAAAATCTCCATTTCATTGGTTTCATTGTTTTCTTCTTTTGTGGGTTTTGTTTAATTAGATGTGAAGAATGAATTAGTTTATGAGTTCAGCCAGGGCTTGATGGAGAAGCTTGCAGTGGAGGCCTTTGAAGTGGCCATGGTGAGTACTGACTTAATAACACTGCTTATATTTAGCTGCCATTAATGGCAAATGAGATATGATTTTACGGCTTTTTGTTTTTCTTTTCAGGTTAGGACTGTGGCAAGGATTGTGCAAGGAGATGCAGGGAAGGTTATTTGTAAAGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGGTATAACTTAAACTTGGCAAGTTTTCTGTGGGATTTTGGTTTTCTGACTCTTACATGTATTTCATTTTGGTGTTTTTATGTTCAACGTTTTATCTCACTTGATGATGCAAGTGTTTTAGGATATATGTTTTGGTTGTGACATTATTTGAAGTTTTGGATGAATGAGCCATAAAAGGACAAAGATTTAAAACCAACTATTGAACCAATTCATGAACAGAGTCAAAAGATATACAAGTATAAGTATACAAATGAAATAAGATCAAAACTAAACTAAACCAAAACATAACCTCTTGGGTGTTTGGCTTATAGATTGGGCTCATATATGGAGAGATTAAGAAGTTGAGTATAGATTTTATGCATGTATTCGTCTATTTTACTTCCTACTTAAAATTTAGAGCATACTTGGGTTAAGTTTCTAGAAAGTAAATCCAAATAAGCTCTTTGACCCATGAATCCCAGAGGTCAAGGTCGACCAGTGAGATGTTGAAGATATCTTCAACATCTAGCGGGAAACAACCCTAGAGAACACATTGCAATTGAATGGAAAGTAGCAACTCTAGAGAACGCATGACGACCTGTTAGGTTATCACCTAAGAAAGAAACACTCAAGAATACTCAAATTTGGAAATATATAGAATTTGTTGTAATATCATAAGAAAAGTAACAATATAACCTGCCTTTTGAGAGGGCTAGTCTCTTCAGAAAAAAAAACCCAAAGAAAATCCTACAAATTTCTTCACACCTTGCTCCCCCCAACTCACTCCCTTTTTTTTATAACGAAGAACCCTAGCAAACTTACTAGCATATTTTCTAATATGCCCCTAATAATCTTAGTTTTCACATCGCTTCTATATACCTATACATACATTCATGCTTTTATGTAAGCTCTCTTCATACAATCGAACTCACCTTACAAAATCTTATGCTTGACATCTAGAAGTCAAGATATTTCCTGTAGACTTAGCTTATTAACACAATGTAGATTTGTTTTTGGCTTTTTTTTATTTTCAGTGTTTTGCAAGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTGTTATAGTTCCTGGGAAAGGTACAATATTGTAGAAAGAAGAAAAAGATAAATAAAATAAAGAGGAATTATTTTGAATCCTTTTGTTTACATATTCAAAGTTTCAAACTACAAATTGTGAGTTTGGAATTCTGTTTGTCATTTGTGTCAGAAGCTGGAGAAACATCTGTGATTTGAATCTCAACTACACTTGGTTGAAGCCTGAAATGAATCTACAATGTCTCTTCATCAATCTCTGTTTTCTTTTTTGGTTTTAGTGTTAAAGTTGAAGGTTATAAGAAGAATTTGATATTGTATTTATATTTTTATATATGTAATGTATATTACTAGATTTCTAGCATTAAAGTTTACTTCCTAGATATGGTTGTGGTATTGTATTTGTATCTTATGTTTTGTGTTTTCGAATAAGTGTGATCTGTGGCCAATATAGAAATGGGTTTCAATTTGAAAAGTTGATTAACTAAAATG ATGGATACATTAGAGGAGGAAGAAGAATACAACTGGAGAGAAGTGCGGCTTCCCTCGCTTATCCCAGTGGTGCCGGAGCCTGAGCTAGAGAGAGAGACGGCGGAGAGACGCCGTGGCCGAGACATCCTTATCGCCGTCGATCATGGTCCCAACAGCAAGCACGCTTTCGATTGGGCTTTGATCCATTTCTGCCGCCTCGCTGACACCATCCATTTAGTCCACGCCGTTTCCAATGTGAAGAATGAATTAGTTTATGAGTTCAGCCAGGGCTTGATGGAGAAGCTTGCAGTGGAGGCCTTTGAAGTGGCCATGGTTAGGACTGTGGCAAGGATTGTGCAAGGAGATGCAGGGAAGGTTATTTGTAAAGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGTGTTTTGCAAGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTGTTATAGTTCCTGGGAAAGGTACAATATTGTAG ATGGATACATTAGAGGAGGAAGAAGAATACAACTGGAGAGAAGTGCGGCTTCCCTCGCTTATCCCAGTGGTGCCGGAGCCTGAGCTAGAGAGAGAGACGGCGGAGAGACGCCGTGGCCGAGACATCCTTATCGCCGTCGATCATGGTCCCAACAGCAAGCACGCTTTCGATTGGGCTTTGATCCATTTCTGCCGCCTCGCTGACACCATCCATTTAGTCCACGCCGTTTCCAATGTGAAGAATGAATTAGTTTATGAGTTCAGCCAGGGCTTGATGGAGAAGCTTGCAGTGGAGGCCTTTGAAGTGGCCATGGTTAGGACTGTGGCAAGGATTGTGCAAGGAGATGCAGGGAAGGTTATTTGTAAAGAAGCAGAGAAGTTGAAGCCTGCTGCTGTTGTTATGGGCACTAGAGGAAGAAGCTTGATTCAAAGTGTTTTGCAAGGAAGTGTGAGTGAGCATGTCTTCCACAACTGCAAATCAGCACCTGTTGTTATAGTTCCTGGGAAAGGTACAATATTGTAG
BLAST of CSPI02G12250 vs. TrEMBL
Match: A0A0A0LL61_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G247600 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 4.1e-94 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of CSPI02G12250 vs. TrEMBL
Match: B9RH54_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1447400 PE=4 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.5e-80 Identity = 145/177 (81.92%), Postives = 167/177 (94.35%), Query Frame = 1
BLAST of CSPI02G12250 vs. TrEMBL
Match: A0A061E0X5_THECC (Adenine nucleotide alpha hydrolases-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_006869 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 9.8e-80 Identity = 149/177 (84.18%), Postives = 168/177 (94.92%), Query Frame = 1
BLAST of CSPI02G12250 vs. TrEMBL
Match: A0A0D2STW1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G029500 PE=4 SV=1) HSP 1 Score: 303.5 bits (776), Expect = 1.7e-79 Identity = 150/177 (84.75%), Postives = 165/177 (93.22%), Query Frame = 1
BLAST of CSPI02G12250 vs. TrEMBL
Match: I3TAI0_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 301.6 bits (771), Expect = 6.3e-79 Identity = 145/174 (83.33%), Postives = 165/174 (94.83%), Query Frame = 1
BLAST of CSPI02G12250 vs. TAIR10
Match: AT2G21620.2 (AT2G21620.2 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 293.9 bits (751), Expect = 6.7e-80 Identity = 140/183 (76.50%), Postives = 169/183 (92.35%), Query Frame = 1
BLAST of CSPI02G12250 vs. TAIR10
Match: AT3G53990.1 (AT3G53990.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 58.9 bits (141), Expect = 3.6e-09 Identity = 44/159 (27.67%), Postives = 73/159 (45.91%), Query Frame = 1
BLAST of CSPI02G12250 vs. TAIR10
Match: AT3G17020.1 (AT3G17020.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08 Identity = 49/155 (31.61%), Postives = 78/155 (50.32%), Query Frame = 1
BLAST of CSPI02G12250 vs. TAIR10
Match: AT1G44760.1 (AT1G44760.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 48.9 bits (115), Expect = 3.7e-06 Identity = 35/122 (28.69%), Postives = 58/122 (47.54%), Query Frame = 1
BLAST of CSPI02G12250 vs. TAIR10
Match: AT3G62550.1 (AT3G62550.1 Adenine nucleotide alpha hydrolases-like superfamily protein) HSP 1 Score: 48.5 bits (114), Expect = 4.9e-06 Identity = 43/155 (27.74%), Postives = 63/155 (40.65%), Query Frame = 1
BLAST of CSPI02G12250 vs. NCBI nr
Match: gi|449462226|ref|XP_004148842.1| (PREDICTED: uncharacterized protein LOC101210790 [Cucumis sativus]) HSP 1 Score: 352.1 bits (902), Expect = 5.9e-94 Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1
BLAST of CSPI02G12250 vs. NCBI nr
Match: gi|698463937|ref|XP_009782318.1| (PREDICTED: uncharacterized protein LOC104231083 [Nicotiana sylvestris]) HSP 1 Score: 308.1 bits (788), Expect = 9.7e-81 Identity = 147/177 (83.05%), Postives = 167/177 (94.35%), Query Frame = 1
BLAST of CSPI02G12250 vs. NCBI nr
Match: gi|255543701|ref|XP_002512913.1| (PREDICTED: uncharacterized protein LOC8285323 isoform X1 [Ricinus communis]) HSP 1 Score: 307.0 bits (785), Expect = 2.2e-80 Identity = 145/177 (81.92%), Postives = 167/177 (94.35%), Query Frame = 1
BLAST of CSPI02G12250 vs. NCBI nr
Match: gi|697170870|ref|XP_009594359.1| (PREDICTED: uncharacterized protein LOC104090868 [Nicotiana tomentosiformis]) HSP 1 Score: 306.2 bits (783), Expect = 3.7e-80 Identity = 147/177 (83.05%), Postives = 166/177 (93.79%), Query Frame = 1
BLAST of CSPI02G12250 vs. NCBI nr
Match: gi|729405971|ref|XP_010555293.1| (PREDICTED: uncharacterized protein LOC104824819 isoform X1 [Tarenaya hassleriana]) HSP 1 Score: 305.4 bits (781), Expect = 6.3e-80 Identity = 145/177 (81.92%), Postives = 169/177 (95.48%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |