CSPI02G12090 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G12090
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionATP-dependent Clp protease proteolytic subunit
LocationChr2 : 12367518 .. 12372278 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTTGGAGCTTCGTTGATACTGTTGTAATTCCTATAGTCTCTTTCTTTGGTTTCATATTGGAGCTCTAAGAACTCAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGTCGCTTCGAACAATCGAGCCTCATCCATTTCTCAACTTTCTCGAAGGTAATGCCTTTTGTTTATTCTCAACTATTTCCCCTAATCTCCAGCTACGAAACTCTAAATTCTTCTTCCTCTCCCTTTTCTGTAGAAATTCATACAGGTCCATAGTCTCTGCTTTCCCGAGACCTTATGGCGACTCCTCCACAATTGGTAATCTGTTTTCTGCAATTGGGTGTTTCTGAATTTTTGTATATGCCCTAATTTTGTTGCAGAGGACTTCTTCTTTGCATAGCGTTTATGTATCGGTGTCAGTTCTCTGATAATATATTTAGATGATATATGATTAGATTTATCTTTACTAGCTTGTGAGTCTAGTATCGATAGGTTGAGTAGGTTGATTTGAGGTGTGTTCAAACCTTCTTTATATTTCAAGCCCATAAGCGGTGTGTTAGATGATATATAACTAAATTTGCCTTTGCTAACTAGTTTAAGCTTTTGGGTCTCATTGATTTCTTTGAAGGTAGTGAATTTCTTTTGTTCATGCTGCATTTATTGATATTCATGACCGAAATGGCACTTACATCTATAAGGATGCATTGAACAATCTGAGTGACTGTGGATTTTCCACGTCTTTTTGAAGGATTATCGAGTAAAACAAATGGGGCACCTTTAAATCTTGACGATAAAGACTTTCTTCGCACCAGTACAAGGTTTGAACTGTTTCCCATTGGCATTTTTGGTTAAAATATCTTTTGTTATTCTCTATTTACTAGCATGAATTAACTTAACTTGGATTTGGATTTCTTTAAAATTGGGATGATGTATATATGTTGTAAATTGTATCTATGCAACATCTTTTTTGCAGTATTCCTTTATATTTTTTGCTTTCTTTTCCCGTTTCATGATATTCTGCCTTCTAATTTTATTCCTTTAACATGATGAAATGTTTTTTTTCTCTTCTGTAGTTATGAACCTATAGTGGCTAGGAGAGATAATCCACCCGTTATGCCTGCTGTGATGACACCAGGAGGGCCATTGGATCTCTCTTCTGTGTTATTTAGGAACCGTATTATATTTATTGGTCAACCTATCAACTCAACCGTGGCACAACGAGTTATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGGTGTGCAATAGGAAAAATTAGCTCCTTTTTTTTCCTCACTCTATTTATTTGATTGGGATTTTTTGTTTTTAATTTGTTTGTAAGCGTAGTTTTTGACCTTATCAGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCAATATTAGCAATTTATGACTGTATGTCTTGGGTAATCGCAAAGCTCACCCTCTATCTCCCTCCCTATCTTTTATGCCTTATTAGTATGTTTATATTGCTTCTATATCCACTTTTTCCGTTATTTATTTTGATATCAAAGGTGTTTTTGATACTTCTAAGATTCACAAAGTCAATGAGTCGTTATGGGGGGCAACATCTATTATGCTACATGCTTTTTAGTCTTGCACAAGATAACAGTAACAATAATTAGCTAAATAGAACATATAATTCAAGCTTATGGTTCCTTTTTATGATTTGGTTTGCTGTTTAGAGCATCCAGTCATCACTTTCTGTCATATTTTGAATATGAAAGGAAGAGGATTATTTTCTTATAAGAGATTATTGACTTGTGCTCTCAGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAATTGTTGCAAGTCAAGGGGCTCTTCTTCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGTATGGCTAAAGTGTTATTGCAATATTAGCTCATCTTTTTAAGGAGCATGATTAAGATTAAATGAGAGGAAAAGGGATGGAGAAGAATGTATGCTATTCTTTGTATTAGATTTCAAAAGTAATCTTTAGTATTTGTTGTAAGTATTAACTTAAGCTTTTTCTAATGCCTCCTTTGTTCTTTTGCCCTAATGACCAATGTTGTAAGACTGCTTGAACTGTTGTGTTATATTTAATATTTCCTTGTAAGAAGTGCTTTACCAACTTCAAGTTTAATCAAACAGTATGCTTTTTGTTTAGTTTTGAAATGGCCCACTATGTATTTCTTCTATTAGTAATTTTAAACTGTTACTAGTAAGAATCAGCAAAAAAGTATATTAACTCACGTTCTGCAATAATGTTGATGATCTTGGTTGAGTGCAGGGTGATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCAATGTTAGTATCTATTTCTTATTTTGGTATTACTCACATAAGTCTTGCCGTTGTTTTGGATCATGCCTATGTGCTTTTTGTTCATTATGTTCAATCCTGTTGCTACCAATAACTTAACAAAAAATTATTAAAAGTTAGAGTTAATGAGAAATGGTTTACCATATATCTAACTTTTAACTGACCATAAGCTTGATTTCTGTCTGGTGACATCTTGACCTGAATCACTTTTGTGGAATTAGGTGGTGAACGGTTGGTATATAATTGCTGTATGCCATAAAATTTACAAATGCAATATATAGTATAGGTATATCTGGCATCTCTTTTGGGAAAGATGTGGCCATTGAAAATTTGCTTATCTTCATCATCTTTTGGAAGCTACCATTGTAGGCGGAAATATAATTCATGAAATTAGGCAGGACTATTTGATTTATATTTTAAACACATTGGAAGAATAAAATCCCAGATCTATTGAATATAAAAGATATAAGAAATACACGATAAACCAAGTGATTCGAGATACTTGGACCTTCCCTTCTTGAGATCACTCTCAACCCTATCTTGAGCCAACTCTCAAGACATAATTCACTCACTCAAATAGGGCTTATCTTCTTCGTTTTCCTCTCCCTCTATTTATAACCAACAAATGTAACTAACTCCTTATGTAATTATTATTATGGAAATATGCCATTAATACCCTAATAAGCCCTTTATACCAATCCTATCACCTTGCTAACAGTAGTAGATTTGAAAGTTGGAGTCAAAGACTGGCCCAAAAGTAACGAGTTTTTGGGAGAATGACTTTAACTTTTATGGTGGTCGCTGGCTACATATTTAAGATGATCTTAAGATTTTACGCATAGTTTTGAAACTCAATATAGTTTTGATGGTTCTCTCAAGGTGTACAATAGTGGGCTAAGAATCTAAAAAGCTCAAATATGAGATACGGACTTTGTCCGATATGTTGCATACATTCTTATCCTTTAATCTACTGGATGGCTGTGTTTTTGAGTTTCCTCCCATTGTTATCTTGGCACTTTGCTGTCAATTTTTTTTCCAGTATTTGGTTTCATTCTGATCATTTTTAATTGTTCTTTGAATTTATTGTTGCAGAAAATTGAAAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGACAATACAACAATACATCGATAGGGATCGATTTTTGTCAGTTTCCGAGGTAACATCCTGCAACATCTAGTGCATGAATTAACATTAAACAAAATAATTGCTGTCCGTCTTGTCAAGAATGAAAAGAAAAAGAAGGATAAAGACAGAGGAAGTAGAGTTGAGTAGAATAAGTTTTCTTGGGATCTTTACTGTATGGTAAAATCTTTTCCACAGCTTTGGAATGTCGGCTACCTGATTCGAACTCCCCTGAACTAGTAACCATTGGTTTCTGAATCTATTCTCTTAATTTCCTACTATAGTCTTTCATCTTTCTTAAACTCTTTGCTAAAATTTAAAAAAAGTCTTACCACAAATTTAAAAAACAAGAACAAGTTTTAAATCTATTTTTTAGTTTTCAATATTTGGCTTAGTTTTCTAAAAACATTGGTAAAGAGTAGATAACAAAATAAAAATTATTGAACCATCATAAGTTGACTACCGGTAAAAAGGGAGACATGGTCTCAATAACCAACTAAGAGGTCAAATGTTCAATTCATAATGGCCACCTATCTAGGAATTAATTTTCTATGAGTTTTCTTAACACCCAAATGTTGTAGGGTCAGATAGGTTGTCCGGTGAGATTAGTCGAGGTGCACATTAAATGACCTTGTCAACTTATGGATATAAAAAGAGAGAATACAAATTATTGAAACACCAAAAACCTGTCTTCTCTTGCAGGCTTTAGATTTTGGGCTTATTGACGGTGTGCTGGAAACAGAATACTGAGCTTCATTTTGGGGAAGATCAAACGGTAATCAGCCACATGTGATCTAATTATGCAAGAATTTGACTTCTTAATGGGGAATTTATTTCAGTCTGTGGAATCGTCATCTCCAAGCATCAAAGTCTCAGTTCGAATTTCCAGCAGCAGGCATCGTACCACTGGCAATCATGATCAAGATCTAGCAATTGAGAACACGATGATATGATTCCTATTATTTGCCAGCCAAGTAGATTTTTAATCTAATTCTTGTTCTTGAGAAAACTGTATTCTTCTTGAACTGTTACATTGTCCAGAGCTTGAACATTAAGAATTCATCCTGATAGCCATCTTGAAAAATAGAGTATGCTCCAAAAGCAGGTTTGAAAGCTACTCTCAAATTTAAGTTTACTCTTGAAAG

mRNA sequence

ATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGTCGCTTCGAACAATCGAGCCTCATCCATTTCTCAACTTTCTCGAAGAAATTCATACAGGTCCATAGTCTCTGCTTTCCCGAGACCTTATGGCGACTCCTCCACAATTGGATTATCGAGTAAAACAAATGGGGCACCTTTAAATCTTGACGATAAAGACTTTCTTCGCACCAGTACAAGTTATGAACCTATAGTGGCTAGGAGAGATAATCCACCCGTTATGCCTGCTGTGATGACACCAGGAGGGCCATTGGATCTCTCTTCTGTGTTATTTAGGAACCGTATTATATTTATTGGTCAACCTATCAACTCAACCGTGGCACAACGAGTTATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCAATATTAGCAATTTATGACTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAATTGTTGCAAGTCAAGGGGCTCTTCTTCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTGATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCAATAAAATTGAAAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGACAATACAACAATACATCGATAGGGATCGATTTTTGTCAGTTTCCGAGGCTTTAGATTTTGGGCTTATTGACGGTGTGCTGGAAACAGAATACTGA

Coding sequence (CDS)

ATGGTAGTAGCTTCACCTTTTACTGCATCTCTCAGTTTCTCTGTCGCTTCGAACAATCGAGCCTCATCCATTTCTCAACTTTCTCGAAGAAATTCATACAGGTCCATAGTCTCTGCTTTCCCGAGACCTTATGGCGACTCCTCCACAATTGGATTATCGAGTAAAACAAATGGGGCACCTTTAAATCTTGACGATAAAGACTTTCTTCGCACCAGTACAAGTTATGAACCTATAGTGGCTAGGAGAGATAATCCACCCGTTATGCCTGCTGTGATGACACCAGGAGGGCCATTGGATCTCTCTTCTGTGTTATTTAGGAACCGTATTATATTTATTGGTCAACCTATCAACTCAACCGTGGCACAACGAGTTATATCACAGCTTGTGACTCTAGCAACAATTGATGAGGATGCAGATATTCTGGTATATCTGAATTGCCCTGGTGGAAGTACATACTCAATATTAGCAATTTATGACTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAATTGTTGCAAGTCAAGGGGCTCTTCTTCTTGCAGGTGGAGAAAAGGGAATGCGCTATGCTATGCCAAATTCTCGAATTATGATTCATCAGCCACAAAGTGGATGTGGGGGTGATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCAATAAAATTGAAAAGATGTATGCTGCATTTACTGGCCAATCTATAGAGACAATACAACAATACATCGATAGGGATCGATTTTTGTCAGTTTCCGAGGCTTTAGATTTTGGGCTTATTGACGGTGTGCTGGAAACAGAATACTGA
Homology
[Close]
BLAST of CSPI02G12090 vs. Swiss-Prot
Match: CLPP6_ARATH (ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis thaliana GN=CLPP6 PE=1 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 6.3e-103
Identity = 188/265 (70.94%), Postives = 223/265 (84.15%), Query Frame = 1 

Query: 11  LSFSVASNN-RASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDKDFL 70
           LSFS  + N + +S    ++RN  R IVSA   PYGDS   GLSS  +G+P+ +D+K   
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNK--- 71

Query: 71  RTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLV 130
             +  +  I A++ NPPVMP+VMTPGGPLDLSSVLFRNRIIFIGQPIN+ VAQRVISQLV
Sbjct: 72  --APRFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPINAQVAQRVISQLV 131

Query: 131 TLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEK 190
           TLA+ID+ +DIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FG+ ASQGALLLAGGEK
Sbjct: 132 TLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEK 191

Query: 191 GMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYI 250
           GMRYAMPN+R+MIHQPQ+GCGG VEDVRRQVNEA+++R KI++MYAAFTGQ +E +QQY 
Sbjct: 192 GMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYT 251

Query: 251 DRDRFLSVSEALDFGLIDGVLETEY 275
           +RDRFLS SEAL+FGLIDG+LETEY
Sbjct: 252 ERDRFLSASEALEFGLIDGLLETEY 271

[Close]
BLAST of CSPI02G12090 vs. Swiss-Prot
Match: CLPP_BACVZ (ATP-dependent Clp protease proteolytic subunit OS=Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / FZB42) GN=clpP PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.5e-40
Identity = 83/172 (48.26%), Postives = 112/172 (65.12%), Query Frame = 1 

Query: 99  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIY 158
           D+ S L ++RII +G  I+  VA  ++SQL+ L   D + DI +Y+N PGGS  + +AIY
Sbjct: 19  DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDISIYINSPGGSITAGMAIY 78

Query: 159 DCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRR 218
           D M +IKPKV T+C G+ AS GA LLA GEKG RYA+PNS +MIHQP  G  G   ++  
Sbjct: 79  DTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138

Query: 219 QVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL 271
                +  R+K+ K+ A  TGQ +E I++  DRD F S  EAL++GLID VL
Sbjct: 139 AAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEALEYGLIDKVL 190

[Close]
BLAST of CSPI02G12090 vs. Swiss-Prot
Match: CLPP_BACSU (ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis (strain 168) GN=clpP PE=1 SV=3)

HSP 1 Score: 167.2 bits (422), Expect = 2.6e-40
Identity = 82/172 (47.67%), Postives = 113/172 (65.70%), Query Frame = 1 

Query: 99  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIY 158
           D+ S L ++RII +G  I+  VA  ++SQL+ LA  D + +I +Y+N PGGS  + +AIY
Sbjct: 19  DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEISLYINSPGGSITAGMAIY 78

Query: 159 DCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRR 218
           D M +IKPKV T+C G+ AS GA LLA GEKG RYA+PNS +MIHQP  G  G   ++  
Sbjct: 79  DTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQATEIEI 138

Query: 219 QVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVL 271
                +  R+K+ K+ A  TGQ +E I++  DRD F S  EAL++GLID +L
Sbjct: 139 AAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEALEYGLIDKIL 190

[Close]
BLAST of CSPI02G12090 vs. Swiss-Prot
Match: CLPP1_SYNE7 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (strain PCC 7942) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.4e-40
Identity = 84/189 (44.44%), Postives = 120/189 (63.49%), Query Frame = 1 

Query: 87  VMPAVMTPGG----PLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILV 146
           ++P V+   G      D+ S L R RIIF+G+P+ S VA R+++QL+ L   D + DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 147 YLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMI 206
           Y+N PGGS Y  L I+D M+ I+P V TVC G+ AS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 207 HQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALD 266
           HQP  G  G  +D+  Q NE +  +  + ++ A  TGQ +  I+   DRD F+S SEA++
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 267 FGLIDGVLE 272
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]
BLAST of CSPI02G12090 vs. Swiss-Prot
Match: CLPP1_SYNP6 (ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=clpP1 PE=3 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.4e-40
Identity = 84/189 (44.44%), Postives = 120/189 (63.49%), Query Frame = 1 

Query: 87  VMPAVMTPGG----PLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILV 146
           ++P V+   G      D+ S L R RIIF+G+P+ S VA R+++QL+ L   D + DI +
Sbjct: 1   MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60

Query: 147 YLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMI 206
           Y+N PGGS Y  L I+D M+ I+P V TVC G+ AS GA LLA G KG R ++ +SRIMI
Sbjct: 61  YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120

Query: 207 HQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALD 266
           HQP  G  G  +D+  Q NE +  +  + ++ A  TGQ +  I+   DRD F+S SEA++
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180

Query: 267 FGLIDGVLE 272
           +GLID V++
Sbjct: 181 YGLIDRVID 189

[Close]
BLAST of CSPI02G12090 vs. TrEMBL
Match: A0A0A0LLX4_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_2G245460 PE=3 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 3.4e-148
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAP 60
           MVVASPFTASLSFSVASNNRASSISQLSRRNS+RSIVSAFPRPYGDSSTIGLSSKTNGAP
Sbjct: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120
           LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV
Sbjct: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240

Query: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
Sbjct: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 274

[Close]
BLAST of CSPI02G12090 vs. TrEMBL
Match: A0A0D2PY01_GOSRA (ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_005G228000 PE=3 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.2e-116
Identity = 212/273 (77.66%), Postives = 242/273 (88.64%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VASP +AS + S+ +  R +SIS LS RNS + IVSA P PYGDSST+GLSS+T G P+
Sbjct: 1   MVASPISASFNLSLCTQTRPTSISSLSPRNSTKLIVSALPSPYGDSSTMGLSSRTAGLPM 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            ++ K  L ++ SY+ I A+  NPPVMPAVMTPGGPLDLS+VLFRNRIIFIGQP+NS VA
Sbjct: 61  KINKKGLLESNPSYDAIQAKTGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLAT+DE+ADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLATVDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ 
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQP 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           +E +QQY +RDRFLSVSEA++FGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]
BLAST of CSPI02G12090 vs. TrEMBL
Match: A0A061E1T2_THECC (ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_007305 PE=3 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 5.9e-116
Identity = 215/273 (78.75%), Postives = 240/273 (87.91%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VAS  +ASLS S+AS  R + I+  S RNS R IVSA P PYGDSST+GLSS T+G PL
Sbjct: 1   MVASAISASLSLSLASRARPTCITSFSPRNSTRLIVSALPSPYGDSSTMGLSSSTSGLPL 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            +D K    ++ SY  + A++ NPPVMPAVMTPGGPLDLS+VLFRNRIIFIGQPINS VA
Sbjct: 61  KIDKKALHDSNLSYGAVEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPINSEVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLA+IDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLASIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYA FTGQ+
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAVFTGQT 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           IE +QQY +RDRFLSVSEA++FGLIDGVLETEY
Sbjct: 241 IEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]
BLAST of CSPI02G12090 vs. TrEMBL
Match: A0A067LN55_JATCU (ATP-dependent Clp protease proteolytic subunit OS=Jatropha curcas GN=JCGZ_10075 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 1.0e-115
Identity = 209/273 (76.56%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VAS  +A +SFS+ S  + +SIS LS RNS R IVS+ P PY DSS  GLSS++ G PL
Sbjct: 1   MVASAISAPVSFSIYSRQKTASISSLSHRNSARFIVSSLPSPYSDSSPNGLSSRSFGLPL 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            +DDKDF   + SY+ IVA++ NPP+MPAVMTPGGPLDLSSVLFRNRIIFIGQPINS VA
Sbjct: 61  RIDDKDFRNANPSYDTIVAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSQVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLAT+DE+ADIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLATVDENADILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQ GCGG VEDVRRQVNEAVQSR+KI+KMY AFTGQ 
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQGGCGGHVEDVRRQVNEAVQSRHKIDKMYTAFTGQP 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           +E +Q+Y +RDRFLS SEA++FGLIDG+LETEY
Sbjct: 241 LEKVQEYTERDRFLSTSEAMEFGLIDGILETEY 273

[Close]
BLAST of CSPI02G12090 vs. TrEMBL
Match: A0A0B0Q2J0_GOSAR (ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_07427 PE=3 SV=1)

HSP 1 Score: 421.4 bits (1082), Expect = 8.5e-115
Identity = 210/273 (76.92%), Postives = 240/273 (87.91%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VAS  +AS + S+ +  R +SIS LS RNS + IVSA P PYGDSST+GLSS+T G P+
Sbjct: 1   MVASAVSASFNISLCTQTRPTSISFLSPRNSTKLIVSALPSPYGDSSTMGLSSRTAGLPM 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            ++ K  L ++ SY+ I A+  NPPVMPAVMTPGGPLDLS+VLFRNRIIFIGQP+NS VA
Sbjct: 61  KINKKGLLESNPSYDSIQAKTGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLAT+DE+ADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLATVDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMY AFTGQ 
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYTAFTGQP 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           +E +QQY +RDRFLSVSEA++FGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]
BLAST of CSPI02G12090 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 375.9 bits (964), Expect = 2.1e-104
Identity = 192/278 (69.06%), Postives = 228/278 (82.01%), Query Frame = 1 

Query: 11  LSFSVASNN-RASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPLNLDDK--- 70
           LSFS  + N + +S    ++RN  R IVSA   PYGDS   GLSS  +G+P+ +D+K   
Sbjct: 12  LSFSSRTRNPKPTSFLSHNQRNPIRRIVSALQSPYGDSLKAGLSSNVSGSPIKIDNKAPS 71

Query: 71  -------DFLRTSTSY---EPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPI 130
                  + L++ST Y     I A++ NPPVMP+VMTPGGPLDLSSVLFRNRIIFIGQPI
Sbjct: 72  SLPLPILNILKSSTVYFIFGVIEAKKGNPPVMPSVMTPGGPLDLSSVLFRNRIIFIGQPI 131

Query: 131 NSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIV 190
           N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTV FG+ 
Sbjct: 132 NAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVA 191

Query: 191 ASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAA 250
           ASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GCGG VEDVRRQVNEA+++R KI++MYAA
Sbjct: 192 ASQGALLLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAA 251

Query: 251 FTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           FTGQ +E +QQY +RDRFLS SEAL+FGLIDG+LETEY
Sbjct: 252 FTGQPLEKVQQYTERDRFLSASEALEFGLIDGLLETEY 289

[Close]
BLAST of CSPI02G12090 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 158.3 bits (399), Expect = 6.8e-39
Identity = 86/199 (43.22%), Postives = 118/199 (59.30%), Query Frame = 1 

Query: 72  STSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTL 131
           S+ Y P  A+   PP M           + S LF+ RII  G  ++  +A  +++QL+ L
Sbjct: 91  SSPYFPAYAQGQGPPPMVQERFQS----IISQLFQYRIIRCGGAVDDDMANIIVAQLLYL 150

Query: 132 ATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEKGM 191
             +D   DI++Y+N PGGS  + +AI+D M  I+P V TVC G+ AS GA LL+ G KG 
Sbjct: 151 DAVDPTKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGK 210

Query: 192 RYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDR 251
           RY++PNSRIMIHQP  G  G   D+  Q NE +  +  +    A  TGQS+E I Q  DR
Sbjct: 211 RYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDR 270

Query: 252 DRFLSVSEALDFGLIDGVL 271
           D F+S  EA ++GLIDGV+
Sbjct: 271 DFFMSAKEAKEYGLIDGVI 285

[Close]
BLAST of CSPI02G12090 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 92/261 (35.25%), Postives = 146/261 (55.94%), Query Frame = 1 

Query: 12  SFSVASNNRASSISQLSRRNSYRSIVSA-FPRPYGDSSTIGLSSKTNGAPLNLDDKDFLR 71
           + S++S+ + S +S  SR NS  S  S+ FP+P   ++     +K    PL       LR
Sbjct: 3   TLSLSSSLKPSLVS--SRLNSSSSASSSSFPKP---NNLYLKPTKLISPPLRTTSPSPLR 62

Query: 72  TSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVAQRVISQLVT 131
            + +   +   +++          G   D+  +L R RI+F+G  I+  VA  ++SQL+ 
Sbjct: 63  FANASIEMSQTQESA-------IRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLL 122

Query: 132 LATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGALLLAGGEKG 191
           L   D   DI +++N PGGS  + +AIYD +  ++  V T+  GI AS  +++L  G KG
Sbjct: 123 LDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKG 182

Query: 192 MRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQSIETIQQYID 251
            R+AMPN+RIMIHQP  G  G   DV  Q  E + ++N +  + A  T +S E + + ID
Sbjct: 183 KRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDID 242

Query: 252 RDRFLSVSEALDFGLIDGVLE 272
           RDR++S  EA+++GLIDGV++
Sbjct: 243 RDRYMSPIEAVEYGLIDGVID 251

[Close]
BLAST of CSPI02G12090 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 74/174 (42.53%), Postives = 108/174 (62.07%), Query Frame = 1 

Query: 98  LDLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAI 157
           LD +++L R RI+F+G  ++   A  VISQL+ L   D + DI +++N PGGS  + + I
Sbjct: 84  LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143

Query: 158 YDCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVR 217
           YD M   K  V TVC G+ AS GA LLA G KG RY MPNS++MIHQP    GG   ++ 
Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMS 203

Query: 218 RQVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE 272
            ++ E +  + K+ K+++  TG+    I+   DRD FL+  EA ++GLID V++
Sbjct: 204 IRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257

[Close]
BLAST of CSPI02G12090 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-32
Identity = 67/173 (38.73%), Postives = 103/173 (59.54%), Query Frame = 1 

Query: 99  DLSSVLFRNRIIFIGQPINSTVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIY 158
           D+ S L + RII I  PIN   +  V++QL+ L + +    I +YLN PGG   + LAIY
Sbjct: 48  DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107

Query: 159 DCMSWIKPKVGTVCFGIVASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRR 218
           D M +I+  + T+C G  AS  +LLLA G KG R ++PN+ +MIHQP  G  G  +D+  
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITI 167

Query: 219 QVNEAVQSRNKIEKMYAAFTGQSIETIQQYIDRDRFLSVSEALDFGLIDGVLE 272
              + V+  + + ++Y   TGQ ++ +   +DRD F++  EA  FG+ID V++
Sbjct: 168 HTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEVID 220

[Close]
BLAST of CSPI02G12090 vs. NCBI nr
Match: gi|449462250|ref|XP_004148854.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucumis sativus])

HSP 1 Score: 532.3 bits (1370), Expect = 4.9e-148
Identity = 273/274 (99.64%), Postives = 274/274 (100.00%), Query Frame = 1 

Query: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAP 60
           MVVASPFTASLSFSVASNNRASSISQLSRRNS+RSIVSAFPRPYGDSSTIGLSSKTNGAP
Sbjct: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSHRSIVSAFPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120
           LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV
Sbjct: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240

Query: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY
Sbjct: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 274

[Close]
BLAST of CSPI02G12090 vs. NCBI nr
Match: gi|659116156|ref|XP_008457934.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 488.0 bits (1255), Expect = 1.1e-134
Identity = 247/274 (90.15%), Postives = 260/274 (94.89%), Query Frame = 1 

Query: 1   MVVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAP 60
           MVVASPFTASL+FSVAS NR SSI QLSRR S+RSIVSA PRPYGDSSTIGLSSKTNGAP
Sbjct: 1   MVVASPFTASLTFSVASLNRTSSIPQLSRRYSHRSIVSALPRPYGDSSTIGLSSKTNGAP 60

Query: 61  LNLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTV 120
           LNLDDKDFL TSTSY PI AR+ NPP+MPAVMTPGGPLDLSSVLFRNRIIFIGQP+NSTV
Sbjct: 61  LNLDDKDFLLTSTSYGPIEARKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSTV 120

Query: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQG 180
           AQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQG
Sbjct: 121 AQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQG 180

Query: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQ 240
           ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ
Sbjct: 181 ALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ 240

Query: 241 SIETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           SIE +QQY +RDRFLSVSEAL+FGLIDGVLETEY
Sbjct: 241 SIEKVQQYTERDRFLSVSEALEFGLIDGVLETEY 274

[Close]
BLAST of CSPI02G12090 vs. NCBI nr
Match: gi|823160503|ref|XP_012480092.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like [Gossypium raimondii])

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 212/273 (77.66%), Postives = 242/273 (88.64%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VASP +AS + S+ +  R +SIS LS RNS + IVSA P PYGDSST+GLSS+T G P+
Sbjct: 1   MVASPISASFNLSLCTQTRPTSISSLSPRNSTKLIVSALPSPYGDSSTMGLSSRTAGLPM 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            ++ K  L ++ SY+ I A+  NPPVMPAVMTPGGPLDLS+VLFRNRIIFIGQP+NS VA
Sbjct: 61  KINKKGLLESNPSYDAIQAKTGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPVNSQVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLAT+DE+ADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLATVDENADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYAAFTGQ 
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQP 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           +E +QQY +RDRFLSVSEA++FGLIDGVLETEY
Sbjct: 241 LEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]
BLAST of CSPI02G12090 vs. NCBI nr
Match: gi|590687760|ref|XP_007042756.1| (CLP protease proteolytic subunit 6 isoform 1 [Theobroma cacao])

HSP 1 Score: 425.2 bits (1092), Expect = 8.4e-116
Identity = 215/273 (78.75%), Postives = 240/273 (87.91%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VAS  +ASLS S+AS  R + I+  S RNS R IVSA P PYGDSST+GLSS T+G PL
Sbjct: 1   MVASAISASLSLSLASRARPTCITSFSPRNSTRLIVSALPSPYGDSSTMGLSSSTSGLPL 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            +D K    ++ SY  + A++ NPPVMPAVMTPGGPLDLS+VLFRNRIIFIGQPINS VA
Sbjct: 61  KIDKKALHDSNLSYGAVEAKKGNPPVMPAVMTPGGPLDLSTVLFRNRIIFIGQPINSEVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLA+IDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLASIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQSGCGG VEDVRRQVNEAVQSR+KI+KMYA FTGQ+
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYAVFTGQT 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           IE +QQY +RDRFLSVSEA++FGLIDGVLETEY
Sbjct: 241 IEKVQQYTERDRFLSVSEAMEFGLIDGVLETEY 273

[Close]
BLAST of CSPI02G12090 vs. NCBI nr
Match: gi|802539180|ref|XP_012069766.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Jatropha curcas])

HSP 1 Score: 424.5 bits (1090), Expect = 1.4e-115
Identity = 209/273 (76.56%), Postives = 239/273 (87.55%), Query Frame = 1 

Query: 2   VVASPFTASLSFSVASNNRASSISQLSRRNSYRSIVSAFPRPYGDSSTIGLSSKTNGAPL 61
           +VAS  +A +SFS+ S  + +SIS LS RNS R IVS+ P PY DSS  GLSS++ G PL
Sbjct: 1   MVASAISAPVSFSIYSRQKTASISSLSHRNSARFIVSSLPSPYSDSSPNGLSSRSFGLPL 60

Query: 62  NLDDKDFLRTSTSYEPIVARRDNPPVMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSTVA 121
            +DDKDF   + SY+ IVA++ NPP+MPAVMTPGGPLDLSSVLFRNRIIFIGQPINS VA
Sbjct: 61  RIDDKDFRNANPSYDTIVAKKGNPPIMPAVMTPGGPLDLSSVLFRNRIIFIGQPINSQVA 120

Query: 122 QRVISQLVTLATIDEDADILVYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGIVASQGA 181
           QRVISQLVTLAT+DE+ADIL+YLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGA
Sbjct: 121 QRVISQLVTLATVDENADILMYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGA 180

Query: 182 LLLAGGEKGMRYAMPNSRIMIHQPQSGCGGDVEDVRRQVNEAVQSRNKIEKMYAAFTGQS 241
           LLLAGGEKGMRYAMPN+RIMIHQPQ GCGG VEDVRRQVNEAVQSR+KI+KMY AFTGQ 
Sbjct: 181 LLLAGGEKGMRYAMPNARIMIHQPQGGCGGHVEDVRRQVNEAVQSRHKIDKMYTAFTGQP 240

Query: 242 IETIQQYIDRDRFLSVSEALDFGLIDGVLETEY 275
           +E +Q+Y +RDRFLS SEA++FGLIDG+LETEY
Sbjct: 241 LEKVQEYTERDRFLSTSEAMEFGLIDGILETEY 273

The following BLAST results are available for this feature:
BLAST of CSPI02G12090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPP6_ARATH6.3e-10370.94ATP-dependent Clp protease proteolytic subunit 6, chloroplastic OS=Arabidopsis t... [more]
CLPP_BACVZ1.5e-4048.26ATP-dependent Clp protease proteolytic subunit OS=Bacillus velezensis (strain DS... [more]
CLPP_BACSU2.6e-4047.67ATP-dependent Clp protease proteolytic subunit OS=Bacillus subtilis (strain 168)... [more]
CLPP1_SYNE74.4e-4044.44ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus elongatus (str... [more]
CLPP1_SYNP64.4e-4044.44ATP-dependent Clp protease proteolytic subunit 1 OS=Synechococcus sp. (strain AT... [more]
BLAST of CSPI02G12090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLX4_CUCSA3.4e-14899.64ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_2G24546... [more]
A0A0D2PY01_GOSRA1.2e-11677.66ATP-dependent Clp protease proteolytic subunit OS=Gossypium raimondii GN=B456_00... [more]
A0A061E1T2_THECC5.9e-11678.75ATP-dependent Clp protease proteolytic subunit OS=Theobroma cacao GN=TCM_007305 ... [more]
A0A067LN55_JATCU1.0e-11576.56ATP-dependent Clp protease proteolytic subunit OS=Jatropha curcas GN=JCGZ_10075 ... [more]
A0A0B0Q2J0_GOSAR8.5e-11576.92ATP-dependent Clp protease proteolytic subunit OS=Gossypium arboreum GN=F383_074... [more]
BLAST of CSPI02G12090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G11750.22.1e-10469.06 CLP protease proteolytic subunit 6[more]
AT1G02560.16.8e-3943.22 nuclear encoded CLP protease 5[more]
AT5G45390.14.9e-3735.25 CLP protease P4[more]
AT1G66670.14.9e-3742.53 CLP protease proteolytic subunit 3[more]
AT5G23140.11.6e-3238.73 nuclear-encoded CLP protease P7[more]
BLAST of CSPI02G12090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449462250|ref|XP_004148854.1|4.9e-14899.64PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucu... [more]
gi|659116156|ref|XP_008457934.1|1.1e-13490.15PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isofo... [more]
gi|823160503|ref|XP_012480092.1|1.7e-11677.66PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic-like ... [more]
gi|590687760|ref|XP_007042756.1|8.4e-11678.75CLP protease proteolytic subunit 6 isoform 1 [Theobroma cacao][more]
gi|802539180|ref|XP_012069766.1|1.4e-11576.56PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isofo... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
cellular_component GO:0005575 cellular_component
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G12090.1CSPI02G12090.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 139..159
score: 3.3E-41coord: 248..267
score: 3.3E-41coord: 170..187
score: 3.3E-41coord: 99..114
score: 3.3E-41coord: 191..210
score: 3.3
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 87..273
score: 32
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 30..274
score: 2.2E
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 99..272
score: 2.0
NoneNo IPR availableunknownCoilCoilcoord: 213..233
scor
NoneNo IPR availablePANTHERPTHR10381:SF8ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 6, CHLOROPLASTICcoord: 30..274
score: 2.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G12090Cla016550Watermelon (97103) v1cpiwmB157
CSPI02G12090Csa2G245460Cucumber (Chinese Long) v2cpicuB065
CSPI02G12090MELO3C020985Melon (DHL92) v3.5.1cpimeB095
CSPI02G12090ClCG11G004510Watermelon (Charleston Gray)cpiwcgB111
CSPI02G12090Lsi10G003530Bottle gourd (USVL1VR-Ls)cpilsiB091
CSPI02G12090MELO3C020985.2Melon (DHL92) v3.6.1cpimedB086
CSPI02G12090CsaV3_2G014590Cucumber (Chinese Long) v3cpicucB080
CSPI02G12090Cla97C11G211270Watermelon (97103) v2cpiwmbB112
CSPI02G12090Bhi10G001632Wax gourdcpiwgoB181
CSPI02G12090Cucsa.109720Cucumber (Gy14) v1cgycpiB134
CSPI02G12090CmaCh02G004090Cucurbita maxima (Rimu)cmacpiB593
CSPI02G12090CmoCh02G004130Cucurbita moschata (Rifu)cmocpiB582
CSPI02G12090Cp4.1LG05g12410Cucurbita pepo (Zucchini)cpecpiB706
CSPI02G12090CsGy2G012070Cucumber (Gy14) v2cgybcpiB056
CSPI02G12090Carg22953Silver-seed gourdcarcpiB0926
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G12090Wax gourdcpiwgoB146
CSPI02G12090Wild cucumber (PI 183967)cpicpiB093
CSPI02G12090Cucumber (Gy14) v1cgycpiB359
CSPI02G12090Cucurbita maxima (Rimu)cmacpiB512
CSPI02G12090Cucurbita maxima (Rimu)cmacpiB547
CSPI02G12090Cucurbita moschata (Rifu)cmocpiB500
CSPI02G12090Cucurbita moschata (Rifu)cmocpiB536
CSPI02G12090Cucumber (Chinese Long) v2cpicuB098
CSPI02G12090Melon (DHL92) v3.5.1cpimeB102
CSPI02G12090Watermelon (Charleston Gray)cpiwcgB131
CSPI02G12090Watermelon (97103) v1cpiwmB150
CSPI02G12090Cucurbita pepo (Zucchini)cpecpiB236
CSPI02G12090Cucurbita pepo (Zucchini)cpecpiB269
CSPI02G12090Bottle gourd (USVL1VR-Ls)cpilsiB097
CSPI02G12090Melon (DHL92) v3.6.1cpimedB096
CSPI02G12090Cucumber (Gy14) v2cgybcpiB308
CSPI02G12090Silver-seed gourdcarcpiB0831
CSPI02G12090Cucumber (Chinese Long) v3cpicucB120
CSPI02G12090Watermelon (97103) v2cpiwmbB124