CSPI02G10720 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G10720
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 10880757 .. 10881188 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATGTTGTCTTCACAAAAATCGTTGATTTCCCCTCCTTGTCTCCAATGGTGCCCATGTGCCGGATATTGAGCACATTGTTCGTTCCTCGCGCTTAGCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

mRNA sequence

ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA

Coding sequence (CDS)

ATGAAAGAATTGATGGAGCACTCACTTTGTGATTTAGAAAAAATCGCAAGTGAAAATCCATTTTCCTTAATCGAGACCATCGTGGAAAGGAAAATGTCACCAAGCAACTTTCGCAAATCTCCTACTTTTGACTCTGAGTCTGTTGGTTTCTCTGTCACTGCGGTTACTTTGTCTGCTACTGCTGTTTTTCGGATCAAAAACTGTCTTATGGTGGAGTCTCGTGCTCCTGGCACATCTATTGTGTTACTCACTGATCATCATGTTGAGATAAACAATCTTCTTCGTTATTTGAAGTCTGTCTTGTCTGCTTCTGGTGATCCTGGTCTTTCTACATCTTGA
Homology
[Close]
BLAST of CSPI02G10720 vs. TrEMBL
Match: A0A0A0LLL2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196880 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-53
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 60
           MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT
Sbjct: 4   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 63

Query: 61  AVFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 113
           A FRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 64  AAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

[Close]
BLAST of CSPI02G10720 vs. NCBI nr
Match: gi|700206518|gb|KGN61637.1| (hypothetical protein Csa_2G196880 [Cucumis sativus])

HSP 1 Score: 215.3 bits (547), Expect = 5.4e-53
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 1 

Query: 1   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 60
           MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT
Sbjct: 4   MKELMEHSLCDLEKIASENPFSLIETIVERKMSPSNFRKSPTFDSESVGFSVTAVTLSAT 63

Query: 61  AVFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 113
           A FRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS
Sbjct: 64  AAFRIKNCLMVESRAPGTSIVLLTDHHVEINNLLRYLKSVLSASGDPGLSTS 115

The following BLAST results are available for this feature:
BLAST of CSPI02G10720 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G10720 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLL2_CUCSA3.8e-5399.11Uncharacterized protein OS=Cucumis sativus GN=Csa_2G196880 PE=4 SV=1[more]
BLAST of CSPI02G10720 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G10720 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206518|gb|KGN61637.1|5.4e-5399.11hypothetical protein Csa_2G196880 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G10720.1CSPI02G10720.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G10720Csa2G196880Cucumber (Chinese Long) v2cpicuB065
CSPI02G10720CsaV3_2G013150Cucumber (Chinese Long) v3cpicucB080
CSPI02G10720CsGy2G010740Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G10720Melon (DHL92) v3.6.1cpimedB134
CSPI02G10720Melon (DHL92) v3.6.1cpimedB137
CSPI02G10720Cucumber (Gy14) v2cgybcpiB100
CSPI02G10720Silver-seed gourdcarcpiB0259
CSPI02G10720Silver-seed gourdcarcpiB0265
CSPI02G10720Silver-seed gourdcarcpiB0354
CSPI02G10720Silver-seed gourdcarcpiB0783
CSPI02G10720Silver-seed gourdcarcpiB0995
CSPI02G10720Cucumber (Chinese Long) v3cpicucB088
CSPI02G10720Watermelon (97103) v2cpiwmbB131
CSPI02G10720Watermelon (97103) v2cpiwmbB133
CSPI02G10720Watermelon (97103) v2cpiwmbB149
CSPI02G10720Watermelon (97103) v2cpiwmbB157
CSPI02G10720Wax gourdcpiwgoB128
CSPI02G10720Wild cucumber (PI 183967)cpicpiB056
CSPI02G10720Wild cucumber (PI 183967)cpicpiB057
CSPI02G10720Cucumber (Gy14) v1cgycpiB378
CSPI02G10720Cucumber (Gy14) v1cgycpiB572
CSPI02G10720Cucurbita maxima (Rimu)cmacpiB240
CSPI02G10720Cucurbita maxima (Rimu)cmacpiB354
CSPI02G10720Cucurbita maxima (Rimu)cmacpiB515
CSPI02G10720Cucurbita maxima (Rimu)cmacpiB825
CSPI02G10720Cucurbita maxima (Rimu)cmacpiB899
CSPI02G10720Cucurbita moschata (Rifu)cmocpiB228
CSPI02G10720Cucurbita moschata (Rifu)cmocpiB346
CSPI02G10720Cucurbita moschata (Rifu)cmocpiB812
CSPI02G10720Cucurbita moschata (Rifu)cmocpiB879
CSPI02G10720Cucumber (Chinese Long) v2cpicuB069
CSPI02G10720Melon (DHL92) v3.5.1cpimeB141
CSPI02G10720Melon (DHL92) v3.5.1cpimeB144
CSPI02G10720Watermelon (Charleston Gray)cpiwcgB139
CSPI02G10720Watermelon (Charleston Gray)cpiwcgB141
CSPI02G10720Watermelon (Charleston Gray)cpiwcgB156
CSPI02G10720Watermelon (Charleston Gray)cpiwcgB163
CSPI02G10720Watermelon (97103) v1cpiwmB125
CSPI02G10720Watermelon (97103) v1cpiwmB121
CSPI02G10720Watermelon (97103) v1cpiwmB156
CSPI02G10720Watermelon (97103) v1cpiwmB174
CSPI02G10720Cucurbita pepo (Zucchini)cpecpiB126
CSPI02G10720Cucurbita pepo (Zucchini)cpecpiB241
CSPI02G10720Cucurbita pepo (Zucchini)cpecpiB306
CSPI02G10720Cucurbita pepo (Zucchini)cpecpiB598
CSPI02G10720Cucurbita pepo (Zucchini)cpecpiB851
CSPI02G10720Bottle gourd (USVL1VR-Ls)cpilsiB085
CSPI02G10720Bottle gourd (USVL1VR-Ls)cpilsiB125
CSPI02G10720Bottle gourd (USVL1VR-Ls)cpilsiB127