CSPI02G10180 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G10180
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 10258597 .. 10260659 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCGTCCAGCAAGGTTCAGAGCCTTTTATGGTAAGAGTCAGTAAGTATTCTTGTTCTCTTTTCCATTTAGAGTTGGAGTTAAGTGTTTGAATGATATGGTGAGCCGTTTGAGCCCTTTAGTTGTTATGTTTGGGTGAATTTTGAAGTTTTGGACTAAATGCTTTGAACTGTTTTAGGATAGATTAAAGTGTGTGTGATTAGTTTTTAACCTGTGAAGGCTTGCTGTTTGTAGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGTTGATTTTGGGGGTAAGTATTCTTTTAAACACTCTCAAATTTCAATTAAGGTCTTCAAAATGAGTTCTAATTTCTAAATTTTTTATGGATTCTTTAAACTTCGAGGACGTTGATATTTGTCCAAGTGGATTTATGATGGAGAATTGTAGGATAGTCAATTGAGGTAACTAGCTTCCACATCCCTTCCAGAATATGAATGTCTGTTGGGGTTTGATGAATGTTTGAAAATATGTTTGGAAGTCTGTTTTGTATTATTTGAAACTGTTTGAAATTCTTTTGGATGTTTTAAATGTTTTCCTATTAGAAGGCATGTTTTATGTGATTTGAGGATTGGCCAAAAGTGTATTATATATTTTCAGTTGATTATGTCAAATGGAAGTGTTGACTCTTTTGAATGATAGTTGGAAGTGGTTTTACTGATTTTGAATTGAAAGTGTTTCTGTTTTTGTTTTGGACCTTTGGTTACTTCTGAAAACTTTTGAAAGGTATGAATGGTTTGAATTGAGAAATTCTTCTGTTGAAAATGCTATTTGAAACTACATGTTTTGTTTCATATGCTTCTAAATGATTCAAGGGGGACTATTTGGATATGCTAGTTTTGTTTTAGGATTGTATGCTAGTTTTTATGCTAGTTTTGTTAGTTTTGTTTTAGGATTGTATGCTAGTTTTGTTTTAGGATTGTATGCTTATTTTATTGTAACCAAAAGTAGAATTTCTTGCACTCAAACACTAGAATTCTTCTGTATAATCTTTGTTTACAATGTTTGCACTGGTTGTACAACAAACAGTCATGATTAATTGGTAAGAATCTTTTCTTTGTAAGGCATAGCATTTTAAGCCATCTTTAGATTGGTCTTTTGCCATTTCATTAATGATTCGATTGGGGTTGACGCCATCAAGCTGACGAACCACTTTTAAATTTGAGTGATACCAACTTTACCATTTTGATCTTTGGTGTTCAGATATAGTCAATGAAACTTTCTACACTTTTTATCCAGTCAAGAAAGAAACTAACTTAGTTCCTTGGTTTTATGTTTACTTATATTCTTCCAGAATAAGTTGGAAGATTTATCTTGTCAGATTTATTCCTCCATCTTTGACCACCAAAATATTGGTGATGGCTGTGAGGTTTTTGATATGGATCTTAAAATGGAGACTGGAATTCATGGTATCTTGGTGGTTGATCTTGTAAAGGAGGGGGGTAACCGTCATCTCTAGAAGAATTAGAGTCATTTCCCAAATTAAGACTAGGAAAATCATGCAAAATATCCATACTGAGGTTGAACATGGACAGGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTGGGCCCCTGGAAATGCTTCTTTCTGGTTCTTGATGTTGACTCAAGCCTCTTGGAGGAATGCTTACCAGTTCTTGATTTCTTGGAAAGTTCTATGAGGGTTTTGTTGTCTACTTTAACTTTCCAACAAGGTTCCCCAATTTATTGGCTTCTTAATGAGCATGGACTTGTTTTTGGACTCAAAATTGGTTATTTGATAATTTTCCTATTTCCTAAGTAAGAAGTGCATTTGCTTGCTGCACTCCCATATGGTGTCATTCATTTATCCTAAGGTGACTTCAACAGTAGTTAACATTTGGTTACTCATTTTGAAGAAGAAGATGCATCCCTGTCATGAGGTGGGGGATCATTTCTTTTGTTGGCATTTCTTCTTTCCACCACTTCACAGGACGCTCCAATTACCAATTAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA

mRNA sequence

ATGCCGTCCAGCAAGGTTCAGAGCCTTTTATGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGTTGATTTTGGGGGGGGACTATTTGGATATGCTAGTTTTGTTTTAGGATTGTATGCTAGTTTTTATGCTAGTTTTGTTAGTTTTGTTTTAGGATTGTATGCTAGTTTTGTTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAGATTTATCTTGTCAGATTTATTCCTCCATCTTTGACCACCAAAATATTGGTGATGGCTGTGAGGTTTTTGATATGGATCTTAAAATGGAGACTGGAATTCATGGTATCTTGGTGGTTGATCTTGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTGGGCCCCTGGAAATGCTTCTTTCTGGTTCTTGATGTTGACTCAAGCCTCTTGGAGGAATGCTTACCAGTTCTTGATTTCTTGGAAAGTTCTATGAGGGTTTTGTTGTCTACTTTAACTTTCCAACAAGGTTCCCCAATTTATTGGCTTCTTAATGAGCATGGACTTGTTTTTGGACTCAAAATTGGACGCTCCAATTACCAATTAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA

Coding sequence (CDS)

ATGCCGTCCAGCAAGGTTCAGAGCCTTTTATGTTTTGGACTAGCTCGGACTGATCGACTCAGGTCTATGGTTGTTGATTTTGGGGGGGGACTATTTGGATATGCTAGTTTTGTTTTAGGATTGTATGCTAGTTTTTATGCTAGTTTTGTTAGTTTTGTTTTAGGATTGTATGCTAGTTTTGTTTTAGGATTGTATGCTTATTTTATTAATAAGTTGGAAGATTTATCTTGTCAGATTTATTCCTCCATCTTTGACCACCAAAATATTGGTGATGGCTGTGAGGTTTTTGATATGGATCTTAAAATGGAGACTGGAATTCATGGTATCTTGGTGGTTGATCTTGAAATTGATTCTGCAGTTGATTTTCATGAAAAAATTTCTTTGTTGGGCCCCTGGAAATGCTTCTTTCTGGTTCTTGATGTTGACTCAAGCCTCTTGGAGGAATGCTTACCAGTTCTTGATTTCTTGGAAAGTTCTATGAGGGTTTTGTTGTCTACTTTAACTTTCCAACAAGGTTCCCCAATTTATTGGCTTCTTAATGAGCATGGACTTGTTTTTGGACTCAAAATTGGACGCTCCAATTACCAATTAATGAAAAGTGTTCTTGGAGAATGCTTGGGACAAAGTCTTTCTTGA
Homology
[Close]
BLAST of CSPI02G10180 vs. TrEMBL
Match: A0A0A0LKL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173030 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 3.4e-103
Identity = 198/211 (93.84%), Postives = 199/211 (94.31%), Query Frame = 1 

Query: 1   MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASF 60
           MPSSKVQSL CFGLARTDRLRSMVVDFGG    YASFVLGLYA       SFVLGLYASF
Sbjct: 1   MPSSKVQSLFCFGLARTDRLRSMVVDFGGL---YASFVLGLYA-------SFVLGLYASF 60

Query: 61  VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDLKMETGIHGILVVDLEIDSAV 120
           VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL+METGIHGILVVDLEIDSAV
Sbjct: 61  VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDLEMETGIHGILVVDLEIDSAV 120

Query: 121 DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN 180
           DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN
Sbjct: 121 DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN 180

Query: 181 EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS 212
           EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS
Sbjct: 181 EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS 201

[Close]
BLAST of CSPI02G10180 vs. NCBI nr
Match: gi|700206465|gb|KGN61584.1| (hypothetical protein Csa_2G173030 [Cucumis sativus])

HSP 1 Score: 382.5 bits (981), Expect = 4.8e-103
Identity = 198/211 (93.84%), Postives = 199/211 (94.31%), Query Frame = 1 

Query: 1   MPSSKVQSLLCFGLARTDRLRSMVVDFGGGLFGYASFVLGLYASFYASFVSFVLGLYASF 60
           MPSSKVQSL CFGLARTDRLRSMVVDFGG    YASFVLGLYA       SFVLGLYASF
Sbjct: 1   MPSSKVQSLFCFGLARTDRLRSMVVDFGGL---YASFVLGLYA-------SFVLGLYASF 60

Query: 61  VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDLKMETGIHGILVVDLEIDSAV 120
           VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDL+METGIHGILVVDLEIDSAV
Sbjct: 61  VLGLYAYFINKLEDLSCQIYSSIFDHQNIGDGCEVFDMDLEMETGIHGILVVDLEIDSAV 120

Query: 121 DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN 180
           DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN
Sbjct: 121 DFHEKISLLGPWKCFFLVLDVDSSLLEECLPVLDFLESSMRVLLSTLTFQQGSPIYWLLN 180

Query: 181 EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS 212
           EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS
Sbjct: 181 EHGLVFGLKIGRSNYQLMKSVLGECLGQSLS 201

The following BLAST results are available for this feature:
BLAST of CSPI02G10180 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G10180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LKL1_CUCSA3.4e-10393.84Uncharacterized protein OS=Cucumis sativus GN=Csa_2G173030 PE=4 SV=1[more]
BLAST of CSPI02G10180 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G10180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700206465|gb|KGN61584.1|4.8e-10393.84hypothetical protein Csa_2G173030 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G10180.1CSPI02G10180.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G10180Csa2G173030Cucumber (Chinese Long) v2cpicuB065
CSPI02G10180CsaV3_2G012610Cucumber (Chinese Long) v3cpicucB080
CSPI02G10180CsGy2G010280Cucumber (Gy14) v2cgybcpiB056
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G10180Silver-seed gourdcarcpiB0259
CSPI02G10180Silver-seed gourdcarcpiB0265
CSPI02G10180Silver-seed gourdcarcpiB0783
CSPI02G10180Silver-seed gourdcarcpiB0812
CSPI02G10180Silver-seed gourdcarcpiB0995
CSPI02G10180Silver-seed gourdcarcpiB1112
CSPI02G10180Cucumber (Chinese Long) v3cpicucB088
CSPI02G10180Watermelon (97103) v2cpiwmbB133
CSPI02G10180Watermelon (97103) v2cpiwmbB149
CSPI02G10180Watermelon (97103) v2cpiwmbB157
CSPI02G10180Wax gourdcpiwgoB122
CSPI02G10180Wax gourdcpiwgoB142
CSPI02G10180Wax gourdcpiwgoB147
CSPI02G10180Wild cucumber (PI 183967)cpicpiB057
CSPI02G10180Cucumber (Gy14) v1cgycpiB378
CSPI02G10180Cucumber (Gy14) v1cgycpiB565
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB240
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB354
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB515
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB591
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB825
CSPI02G10180Cucurbita maxima (Rimu)cmacpiB899
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB503
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB228
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB346
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB580
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB812
CSPI02G10180Cucurbita moschata (Rifu)cmocpiB879
CSPI02G10180Cucumber (Chinese Long) v2cpicuB069
CSPI02G10180Melon (DHL92) v3.5.1cpimeB126
CSPI02G10180Melon (DHL92) v3.5.1cpimeB141
CSPI02G10180Melon (DHL92) v3.5.1cpimeB144
CSPI02G10180Watermelon (Charleston Gray)cpiwcgB141
CSPI02G10180Watermelon (Charleston Gray)cpiwcgB156
CSPI02G10180Watermelon (Charleston Gray)cpiwcgB163
CSPI02G10180Watermelon (97103) v1cpiwmB125
CSPI02G10180Watermelon (97103) v1cpiwmB121
CSPI02G10180Watermelon (97103) v1cpiwmB174
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB126
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB241
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB306
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB598
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB716
CSPI02G10180Cucurbita pepo (Zucchini)cpecpiB851
CSPI02G10180Bottle gourd (USVL1VR-Ls)cpilsiB085
CSPI02G10180Bottle gourd (USVL1VR-Ls)cpilsiB125
CSPI02G10180Bottle gourd (USVL1VR-Ls)cpilsiB127
CSPI02G10180Melon (DHL92) v3.6.1cpimedB122
CSPI02G10180Melon (DHL92) v3.6.1cpimedB134
CSPI02G10180Melon (DHL92) v3.6.1cpimedB137
CSPI02G10180Cucumber (Gy14) v2cgybcpiB100