CSPI02G09810 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI02G09810
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	Chr2 : 9815283 .. 9816632 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGAATAATGCCTTTCTCCATGGAGACTTGTTTGAGGAAGTGTACATGGACTTACCACTTGGTTATAAACCAAATATCACCATTCAGGGGGAGAAAATGGTCTGCAAACTTCACAAGTCCATATATGGTCTGAAACAAGCCTCTCGTCAATGGTTTGCTAAGTTCTCTCAGTTTCTTATCTCAATAGGTTTCTGACAATCAAAGGCAGATTATTCACTCTTCATAAAAAGCCAAGGTAACAATTTTCTTGCCCTACTTGTTTATGTTGACGACATTATTATCACGGGAGCAGATAACGACCTCATCTGTAATCTTCAAACTGAACTCAACCATAAATTCCTACTCAAAGACTTGGGATCCCTTAAATTCTTTCTTGGCCTCGAACTAACTTGATCTTCAACCGGCATACTCTTGTCACAGAGACATTACGCCTTGCGTTTATTGGAAGAAGCAGGCTTACTTGGTGCCAAACCAGCCTCAATACCTATGAATCCCATTGTCAAATTAAAGAGTTCGGACAAAGACCTTCTCCAAGACCCAACTGCTTATAGAAGATTAGTTGGGAAGCTTCTGTATTTGACCATTTCAAGACCAGACATCACGTTTTCTGTTCACAAACTTAGCCAGTTCATGGCAAAACCCAACAAGACACATATGGATGCCGCAAATCATCTCTTGAGATACATCAAAGGCTCACCTGGTCAAGGAATCTTCTTGTCCAAAACAGATGATTTATCCCTAAAAGCTTTTGCAGATGCGGATTGGGGATCATGTCCTGACACTCGTCGCTCAGATACTGGGTTTTGTGTCTTCCTTGGAAAGTCTTTAGTATCATGGAAGCCAAAGAAACAGCAAACAGTTTCTCGGTCATCGGCTGAAGCAGAGTACCGAGCATTGGCAACAGTATCCTGTGAAGTTATATGGCTCAAAAGTCTCCTTAAAGAACTTCAAATTGAAGTAGATACGCCAGCCGTTGTTTACTGTAATAATCAGGCTGCCATTTACATAGCTAATAACCCTATGTTTCATGAGAGAACCAAGCACATAGAACTAGATTGCCACTTTGTCCGAGATAGAGTCACTGATGAATCCATCAAACTACTCCCTATTCGCTCTACTCATCAACTTGCTGATGCTCTCACTAAGCCCCTCAATGCCACAACCCTGTCTCTTTACATATGCAAGATGGAAGTCAAAGACATATTTTCTCCATCTTGAGGGGGAGTATTAGACAGTTAGTATGTTAAGAATTAGTTATCAGTTTTCTTCAACTTCCAGCTTGTTAAAGTAGTTTCATTTCTGTTACAACCATTGTTAGAACTCTCATGTACAGACTTGTATAAATACC

mRNA sequence

ATGAATCCCATTGTCAAATTAAAGAGTTCGGACAAAGACCTTCTCCAAGACCCAACTGCTTATAGAAGATTAGTTGGGAAGCTTCTGTATTTGACCATTTCAAGACCAGACATCACGTTTTCTGTTCACAAACTTAGCCAGTTCATGGCAAAACCCAACAAGACACATATGGATGCCGCAAATCATCTCTTGAGATACATCAAAGGCTCACCTGGTCAAGGAATCTTCTTGTCCAAAACAGATGATTTATCCCTAAAAGCTTTTGCAGATGCGGATTGGGGATCATGTCCTGACACTCGTCGCTCAGATACTGGGTTTTGTGTCTTCCTTGGAAAGTCTTTAGTATCATGGAAGCCAAAGAAACAGCAAACAGTTTCTCGGTCATCGGCTGAAGCAGAGTACCGAGCATTGGCAACAGTATCCTGTGAAGTTATATGGCTCAAAAGTCTCCTTAAAGAACTTCAAATTGAAGTAGATACGCCAGCCGTTGTTTACTGTAATAATCAGGCTGCCATTTACATAGCTAATAACCCTATGTTTCATGAGAGAACCAAGCACATAGAACTAGATTGCCACTTTGTCCGAGATAGAGTCACTGATGAATCCATCAAACTACTCCCTATTCGCTCTACTCATCAACTTGCTGATGCTCTCACTAAGCCCCTCAATGCCACAACCCTGTCTCTTTACATATGCAAGATGGAAGTCAAAGACATATTTTCTCCATCTTGA

Coding sequence (CDS)

ATGAATCCCATTGTCAAATTAAAGAGTTCGGACAAAGACCTTCTCCAAGACCCAACTGCTTATAGAAGATTAGTTGGGAAGCTTCTGTATTTGACCATTTCAAGACCAGACATCACGTTTTCTGTTCACAAACTTAGCCAGTTCATGGCAAAACCCAACAAGACACATATGGATGCCGCAAATCATCTCTTGAGATACATCAAAGGCTCACCTGGTCAAGGAATCTTCTTGTCCAAAACAGATGATTTATCCCTAAAAGCTTTTGCAGATGCGGATTGGGGATCATGTCCTGACACTCGTCGCTCAGATACTGGGTTTTGTGTCTTCCTTGGAAAGTCTTTAGTATCATGGAAGCCAAAGAAACAGCAAACAGTTTCTCGGTCATCGGCTGAAGCAGAGTACCGAGCATTGGCAACAGTATCCTGTGAAGTTATATGGCTCAAAAGTCTCCTTAAAGAACTTCAAATTGAAGTAGATACGCCAGCCGTTGTTTACTGTAATAATCAGGCTGCCATTTACATAGCTAATAACCCTATGTTTCATGAGAGAACCAAGCACATAGAACTAGATTGCCACTTTGTCCGAGATAGAGTCACTGATGAATCCATCAAACTACTCCCTATTCGCTCTACTCATCAACTTGCTGATGCTCTCACTAAGCCCCTCAATGCCACAACCCTGTCTCTTTACATATGCAAGATGGAAGTCAAAGACATATTTTCTCCATCTTGA

Homology

[Close]

BLAST of CSPI02G09810 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-35
Identity = 80/201 (39.80%), Postives = 120/201 (59.70%), Query Frame = 1


Query: 21   YRRLVGKLLYLTI-SRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQGIFLSK 80
            Y   VG L+Y  + +RPDI  +V  +S+F+  P K H +A   +LRY++G+ G  +    
Sbjct: 1111 YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG 1170

Query: 81   TDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRSSAEAEYRALAT 140
            +D + LK + DAD     D R+S TG+        +SW+ K Q+ V+ S+ EAEY A   
Sbjct: 1171 SDPI-LKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATE 1230

Query: 141  VSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIELDCHFVRDRVT 200
               E+IWLK  L+EL +      VVYC++Q+AI ++ N M+H RTKHI++  H++R+ V 
Sbjct: 1231 TGKEMIWLKRFLQELGLH-QKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVD 1290

Query: 201  DESIKLLPIRSTHQLADALTK 221
            DES+K+L I +    AD LTK
Sbjct: 1291 DESLKVLKISTNENPADMLTK 1309

[Close]

BLAST of CSPI02G09810 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 143.3 bits (360), Expect = 3.6e-33
Identity = 84/223 (37.67%), Postives = 126/223 (56.50%), Query Frame = 1


Query: 6    KLKSSDKDLLQDPTAYRRLVGKLLYLTI-SRPDITFSVHKLSQFMAKPNKTHMDAANHLL 65
            +L +SD+D     T  R L+G L+Y+ + +RPD+T +V+ LS++ +K N         +L
Sbjct: 1169 ELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVL 1228

Query: 66   RYIKGSPGQGIFLSKTDDLSLK--AFADADWGSCPDTRRSDTGFCV-FLGKSLVSWKPKK 125
            RY+KG+    +   K      K   + D+DW      R+S TG+       +L+ W  K+
Sbjct: 1229 RYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKR 1288

Query: 126  QQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFH 185
            Q +V+ SS EAEY AL     E +WLK LL  + I+++ P  +Y +NQ  I IANNP  H
Sbjct: 1289 QNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCH 1348

Query: 186  ERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNA 225
            +R KHI++  HF R++V +  I L  I + +QLAD  TKPL A
Sbjct: 1349 KRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPA 1388

[Close]

BLAST of CSPI02G09810 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-32
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 1


Query: 17  DPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQGIF 76
           DP+ +R +VG L YLT++RPDI+++V+ + Q M +P     D    +LRY+KG+   G++
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  LSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRSSAEAEYRA 136
           + K   L+++AF D+DW  C  TRRS TGFC FLG +++SW  K+Q TVSRSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 137 LATVSCEVIW 147
           LA  + E+ W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of CSPI02G09810 vs. Swiss-Prot
Match: M240_ARATH (Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg00240 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.7e-23
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 29  LYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQGIFLSKTDDLSLKAF 88
           +YLTI+RPD+TF+V++LSQF +      M A   +L Y+KG+ GQG+F S T DL LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 89  ADADWGSCPDTRRSDTGFC 108
           AD+DW SCPDTRRS TGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of CSPI02G09810 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 1


Query: 15  LQDPTAYRRLVGKLLYLT-ISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQ 74
           L+D T Y+ +VG+LL+     RPDI++ V  LS+F+ +P   H+++A  +LRY+  +   
Sbjct: 177 LKDITPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSM 236

Query: 75  GIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKK-QQTVSRSSAEA 134
            +       L+L  + DA  G+  D   S  G+   L  + V+W  KK +  +   S EA
Sbjct: 237 CLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPSTEA 296

Query: 135 EYRALATVSCEV 145
           EY   +    E+
Sbjct: 297 EYITASETVMEI 308

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BLAST of CSPI02G09810 vs. TrEMBL
Match: A5BLV0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033389 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.3e-78
Identity = 140/235 (59.57%), Postives = 182/235 (77.45%), Query Frame = 1


Query: 9    SSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIK 68
            S   +LL+DP+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA  +LRY+K
Sbjct: 1045 SDSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 1104

Query: 69   GSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRS 128
             SPGQG+F    +DLSL+AF+D+DW  CP +RRS TG+CVFLG SL+SW+ K+Q+TVS S
Sbjct: 1105 NSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLS 1164

Query: 129  SAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIE 188
            SAEAEYRA+A   CE+ WL+SLLK+L+I    PA++YC+N AA++IA NP+FHERT+HIE
Sbjct: 1165 SAEAEYRAMAGTCCELSWLRSLLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIE 1224

Query: 189  LDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIFSPS 244
            +DCHF+RD++ D S+    I ST QLAD  TKPL   T S  I K+ V DI SP+
Sbjct: 1225 MDCHFIRDKIQDGSVVTKHIASTBQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1279

[Close]

BLAST of CSPI02G09810 vs. TrEMBL
Match: A5AIJ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031733 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.1e-77
Identity = 140/243 (57.61%), Postives = 184/243 (75.72%), Query Frame = 1


Query: 1    MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
            M   +KL  S  +LL+DP+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA
Sbjct: 1081 MEQNIKLSDSS-ELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAA 1140

Query: 61   NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
              +LRY+K SPGQG+F    +DLSL+AF+D+DW  CP +RRS TG+CVFLG SL+SW+ K
Sbjct: 1141 LRVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTK 1200

Query: 121  KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
            +Q+TVS SSAEAEYRA+    CE+ WL+SLLK+L+I    PA++YC+N  A++IA NP+F
Sbjct: 1201 RQKTVSLSSAEAEYRAMTGTCCELSWLRSLLKDLRILHPKPALLYCDNTTALHIAANPVF 1260

Query: 181  HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIF 240
            HERT+HIE+DCHF+R+++ D S     I ST+QLAD  TKPL   T S  I K+ V DI 
Sbjct: 1261 HERTRHIEMDCHFIREKIQDGSFVTKHIASTNQLADVFTKPLGKETFSTMIHKLGVLDIH 1320

Query: 241  SPS 244
            SP+
Sbjct: 1321 SPT 1322

[Close]

BLAST of CSPI02G09810 vs. TrEMBL
Match: A5ART6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028058 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 1.2e-75
Identity = 137/235 (58.30%), Postives = 178/235 (75.74%), Query Frame = 1


Query: 9    SSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIK 68
            S   +LL+ P+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA  +LRY+K
Sbjct: 891  SDSGELLKGPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 950

Query: 69   GSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRS 128
             SPGQG+F    +DLSL+AF+D DW  CP +RRS TG+CVFLG SL+SW+ K+Q+TVS S
Sbjct: 951  NSPGQGLFFPSQNDLSLRAFSDXDWAGCPISRRSXTGYCVFLGSSLISWRTKRQKTVSLS 1010

Query: 129  SAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIE 188
            S EAEYRA+A   CE+ WL+SLLK+L+I    PA++YC+N AA++IA NP+FHERT+HIE
Sbjct: 1011 SXEAEYRAMAGTCCELSWLRSLLKDLRILHPKPALLYCDNTAALHIAVNPVFHERTRHIE 1070

Query: 189  LDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIFSPS 244
            +DCHF+RD++ D S+    I ST Q AD  TKPL   T S  I K+ V DI SP+
Sbjct: 1071 MDCHFIRDKIQDGSVVTKHIASTDQXADVFTKPLGKETFSTMIHKLGVLDIHSPT 1125

[Close]

BLAST of CSPI02G09810 vs. TrEMBL
Match: A5ALS1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001578 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 2.0e-75
Identity = 136/238 (57.14%), Postives = 182/238 (76.47%), Query Frame = 1


Query: 7    LKSSDK-DLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLR 66
            LK SDK DLL+D   YRRLVG+L+YLT+SRPDIT++VH LS+FM +P K HM+AA  ++R
Sbjct: 1086 LKLSDKSDLLKDQGRYRRLVGRLIYLTVSRPDITYAVHVLSRFMHQPRKAHMEAAFRVVR 1145

Query: 67   YIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTV 126
            Y+K +PGQG+F S  +D  L+A+ D+DW  CP TRRS TG+CVFLG SL+SW+ K+Q+TV
Sbjct: 1146 YLKNAPGQGLFFSSNNDFRLRAYCDSDWAGCPLTRRSTTGYCVFLGPSLISWRSKRQKTV 1205

Query: 127  SRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTK 186
            S SSAEAEYRA+    CE+ WL+ LLK+L +    PA++YC+N+AA++IA NP+FHERT+
Sbjct: 1206 SLSSAEAEYRAMTGACCELTWLRYLLKDLGVLHKEPALLYCDNKAALHIAANPVFHERTR 1265

Query: 187  HIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIFSPS 244
            HIE+DCH++RD++ D SI    + S HQLAD LTKPL     +  I K+ V+DI SP+
Sbjct: 1266 HIEMDCHYIRDKIQDGSIITRHVSSAHQLADILTKPLGKEFFAPMIRKLGVQDIHSPT 1323

[Close]

BLAST of CSPI02G09810 vs. TrEMBL
Match: A0A151T590_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_016743 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.6e-75
Identity = 135/243 (55.56%), Postives = 185/243 (76.13%), Query Frame = 1


Query: 1   MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
           M   +KL S + +LL+DP+ YRR VG+L+ LTI+RPDIT++VH LS+FM  P K+H+ AA
Sbjct: 87  MEQNIKL-SDEGELLKDPSIYRRFVGRLINLTITRPDITYAVHVLSRFMHAPCKSHLKAA 146

Query: 61  NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
            H+LRY+K +PGQG+F    +DLSL+AF D+DWG CP +R+S TG+CVFLG SL+SW+ K
Sbjct: 147 MHVLRYLKNNPGQGLFFPSQNDLSLRAFCDSDWGGCPVSRKSTTGYCVFLGSSLISWRTK 206

Query: 121 KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
           +Q+T+S SSAEAEYRALA   CE+ WL+SLLK+L+I    PA++YC+N+AA++IA NP+F
Sbjct: 207 RQKTISLSSAEAEYRALAGTCCELTWLRSLLKDLRILHPKPALLYCDNKAALHIAANPVF 266

Query: 181 HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIF 240
           HE+T+HIE+DCHF+RD++ D S+    + S  QLAD  TKPL     S+   K+ V DI 
Sbjct: 267 HEKTRHIEMDCHFIRDKIQDGSVTTKYVPSAEQLADVFTKPLGKEAFSIMKRKLGVLDIH 326

Query: 241 SPS 244
           SP+
Sbjct: 327 SPT 328

[Close]

BLAST of CSPI02G09810 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 219.5 bits (558), Expect = 2.2e-57
Identity = 104/197 (52.79%), Postives = 139/197 (70.56%), Query Frame = 1


Query: 1   MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
           M+P V   +       D  AYRRL+G+L+YL I+R DI+F+V+KLSQF   P   H  A 
Sbjct: 358 MDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAV 417

Query: 61  NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
             +L YIKG+ GQG+F S   ++ L+ F+DA + SC DTRRS  G+C+FLG SL+SWK K
Sbjct: 418 MKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSK 477

Query: 121 KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
           KQQ VS+SSAEAEYRAL+  + E++WL    +ELQ+ +  P +++C+N AAI+IA N +F
Sbjct: 478 KQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVF 537

Query: 181 HERTKHIELDCHFVRDR 198
           HERTKHIE DCH VR+R
Sbjct: 538 HERTKHIESDCHSVRER 554

[Close]

BLAST of CSPI02G09810 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 140.2 bits (352), Expect = 1.7e-33
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 1


Query: 17  DPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQGIF 76
           DP+ +R +VG L YLT++RPDI+++V+ + Q M +P     D    +LRY+KG+   G++
Sbjct: 96  DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLY 155

Query: 77  LSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRSSAEAEYRA 136
           + K   L+++AF D+DW  C  TRRS TGFC FLG +++SW  K+Q TVSRSS E EYRA
Sbjct: 156 IHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRA 215

Query: 137 LATVSCEVIW 147
           LA  + E+ W
Sbjct: 216 LALTAAELTW 225

[Close]

BLAST of CSPI02G09810 vs. TAIR10
Match: ATMG00240.1 (ATMG00240.1 Gag-Pol-related retrotransposon family protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.5e-24
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 1


Query: 29  LYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIKGSPGQGIFLSKTDDLSLKAF 88
           +YLTI+RPD+TF+V++LSQF +      M A   +L Y+KG+ GQG+F S T DL LKAF
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 89  ADADWGSCPDTRRSDTGFC 108
           AD+DW SCPDTRRS TGFC
Sbjct: 61  ADSDWASCPDTRRSVTGFC 79

[Close]

BLAST of CSPI02G09810 vs. NCBI nr
Match: gi|147816002|emb|CAN65808.1| (hypothetical protein VITISV_033389 [Vitis vinifera])

HSP 1 Score: 299.3 bits (765), Expect = 6.2e-78
Identity = 140/235 (59.57%), Postives = 182/235 (77.45%), Query Frame = 1


Query: 9    SSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIK 68
            S   +LL+DP+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA  +LRY+K
Sbjct: 1045 SDSGELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 1104

Query: 69   GSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRS 128
             SPGQG+F    +DLSL+AF+D+DW  CP +RRS TG+CVFLG SL+SW+ K+Q+TVS S
Sbjct: 1105 NSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTKRQKTVSLS 1164

Query: 129  SAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIE 188
            SAEAEYRA+A   CE+ WL+SLLK+L+I    PA++YC+N AA++IA NP+FHERT+HIE
Sbjct: 1165 SAEAEYRAMAGTCCELSWLRSLLKDLRILHPKPALLYCDNTAALHIAANPVFHERTRHIE 1224

Query: 189  LDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIFSPS 244
            +DCHF+RD++ D S+    I ST QLAD  TKPL   T S  I K+ V DI SP+
Sbjct: 1225 MDCHFIRDKIQDGSVVTKHIASTBQLADVFTKPLGKETFSTMIHKLGVLDIHSPT 1279

[Close]

BLAST of CSPI02G09810 vs. NCBI nr
Match: gi|923533926|ref|XP_013705902.1| (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Brassica napus])

HSP 1 Score: 295.4 bits (755), Expect = 8.9e-77
Identity = 135/243 (55.56%), Postives = 180/243 (74.07%), Query Frame = 1


Query: 1   MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
           M P  KL  S  DLL DP+ YR+LVGKLLYLT +RPDIT++VHKLSQFM+ P   H+ AA
Sbjct: 1   MEPNSKLSDSSGDLLPDPSVYRKLVGKLLYLTHTRPDITYAVHKLSQFMSTPRVDHLKAA 60

Query: 61  NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
             +LRY+K  P QG+F S +  +SL AF DADW SCPD+RRS TG+CVFLG SL+SW+ K
Sbjct: 61  QRVLRYLKNDPAQGLFYSASSTVSLTAFCDADWASCPDSRRSTTGYCVFLGDSLISWRAK 120

Query: 121 KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
           KQ TVSRSS+EAEYR++A  +CE+IW+ +LL++L   +  PA +YC+NQ+A++IA+NP++
Sbjct: 121 KQATVSRSSSEAEYRSMADTTCELIWIAALLRDLHCPLTGPATLYCDNQSALHIASNPVY 180

Query: 181 HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIF 240
           HERTKHIE+DCH VR+R+    +K + ++S HQLAD  TK +        I KM +  +F
Sbjct: 181 HERTKHIEIDCHVVRERLQSGFLKTMHVKSAHQLADVFTKAVQPALFHQLILKMGLHHLF 240

Query: 241 SPS 244
           +PS
Sbjct: 241 APS 243

[Close]

BLAST of CSPI02G09810 vs. NCBI nr
Match: gi|147773401|emb|CAN73437.1| (hypothetical protein VITISV_031733 [Vitis vinifera])

HSP 1 Score: 295.0 bits (754), Expect = 1.2e-76
Identity = 140/243 (57.61%), Postives = 184/243 (75.72%), Query Frame = 1


Query: 1    MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
            M   +KL  S  +LL+DP+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA
Sbjct: 1081 MEQNIKLSDSS-ELLKDPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAA 1140

Query: 61   NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
              +LRY+K SPGQG+F    +DLSL+AF+D+DW  CP +RRS TG+CVFLG SL+SW+ K
Sbjct: 1141 LRVLRYLKNSPGQGLFFPSQNDLSLRAFSDSDWAGCPISRRSTTGYCVFLGSSLISWRTK 1200

Query: 121  KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
            +Q+TVS SSAEAEYRA+    CE+ WL+SLLK+L+I    PA++YC+N  A++IA NP+F
Sbjct: 1201 RQKTVSLSSAEAEYRAMTGTCCELSWLRSLLKDLRILHPKPALLYCDNTTALHIAANPVF 1260

Query: 181  HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIF 240
            HERT+HIE+DCHF+R+++ D S     I ST+QLAD  TKPL   T S  I K+ V DI 
Sbjct: 1261 HERTRHIEMDCHFIREKIQDGSFVTKHIASTNQLADVFTKPLGKETFSTMIHKLGVLDIH 1320

Query: 241  SPS 244
            SP+
Sbjct: 1321 SPT 1322

[Close]

BLAST of CSPI02G09810 vs. NCBI nr
Match: gi|694422107|ref|XP_009338880.1| (PREDICTED: uncharacterized protein LOC103931184 [Pyrus x bretschneideri])

HSP 1 Score: 291.2 bits (744), Expect = 1.7e-75
Identity = 135/243 (55.56%), Postives = 181/243 (74.49%), Query Frame = 1


Query: 1    MNPIVKLKSSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAA 60
            M P + L  +  DLL+DPT YR++VGKL+YLTI+RP+IT++V+ LSQFM +P + H+DAA
Sbjct: 901  MEPDLVLLPTGSDLLKDPTQYRQMVGKLIYLTITRPEITYAVNTLSQFMQEPRRHHLDAA 960

Query: 61   NHLLRYIKGSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPK 120
            + LLRY+K +PGQG+  S    L+L  + DADW  CP TRRS TG+C+FLG SL+SWK K
Sbjct: 961  HRLLRYLKNAPGQGLLFSSQSKLNLTGYCDADWARCPITRRSVTGYCIFLGNSLISWKSK 1020

Query: 121  KQQTVSRSSAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMF 180
            KQ TV+RSSAEAEYR++A  +CE+ WL+ LLK+LQI    PA ++C+NQAA++IA NP+F
Sbjct: 1021 KQVTVARSSAEAEYRSMAAATCELTWLRYLLKDLQIIHPNPAKLFCDNQAALHIAVNPVF 1080

Query: 181  HERTKHIELDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIF 240
            HERTKHIELDCH +R+R+    IK   I +  Q+AD  TKPL +    L +CK+ V DI 
Sbjct: 1081 HERTKHIELDCHTIRERIQRGEIKTAYIHTGEQVADMFTKPLRSPAFHLLLCKLGVLDIH 1140

Query: 241  SPS 244
            +P+
Sbjct: 1141 APT 1143

[Close]

BLAST of CSPI02G09810 vs. NCBI nr
Match: gi|147857914|emb|CAN82526.1| (hypothetical protein VITISV_028058 [Vitis vinifera])

HSP 1 Score: 291.2 bits (744), Expect = 1.7e-75
Identity = 137/235 (58.30%), Postives = 178/235 (75.74%), Query Frame = 1


Query: 9    SSDKDLLQDPTAYRRLVGKLLYLTISRPDITFSVHKLSQFMAKPNKTHMDAANHLLRYIK 68
            S   +LL+ P+ YRRLVG+L+YLTI+RPDIT+SVH LS+FM  P + HM+AA  +LRY+K
Sbjct: 891  SDSGELLKGPSQYRRLVGRLIYLTITRPDITYSVHVLSRFMHAPRRPHMEAALRVLRYLK 950

Query: 69   GSPGQGIFLSKTDDLSLKAFADADWGSCPDTRRSDTGFCVFLGKSLVSWKPKKQQTVSRS 128
             SPGQG+F    +DLSL+AF+D DW  CP +RRS TG+CVFLG SL+SW+ K+Q+TVS S
Sbjct: 951  NSPGQGLFFPSQNDLSLRAFSDXDWAGCPISRRSXTGYCVFLGSSLISWRTKRQKTVSLS 1010

Query: 129  SAEAEYRALATVSCEVIWLKSLLKELQIEVDTPAVVYCNNQAAIYIANNPMFHERTKHIE 188
            S EAEYRA+A   CE+ WL+SLLK+L+I    PA++YC+N AA++IA NP+FHERT+HIE
Sbjct: 1011 SXEAEYRAMAGTCCELSWLRSLLKDLRILHPKPALLYCDNTAALHIAVNPVFHERTRHIE 1070

Query: 189  LDCHFVRDRVTDESIKLLPIRSTHQLADALTKPLNATTLSLYICKMEVKDIFSPS 244
            +DCHF+RD++ D S+    I ST Q AD  TKPL   T S  I K+ V DI SP+
Sbjct: 1071 MDCHFIRDKIQDGSVVTKHIASTDQXADVFTKPLGKETFSTMIHKLGVLDIHSPT 1125

The following BLAST results are available for this feature:

BLAST of CSPI02G09810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POLX_TOBAC	1.0e-35	39.80	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
COPIA_DROME	3.6e-33	37.67	Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3	[more]
M810_ARATH	3.0e-32	47.69	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0...	[more]
M240_ARATH	9.7e-23	60.76	Uncharacterized mitochondrial protein AtMg00240 OS=Arabidopsis thaliana GN=AtMg0...	[more]
YCH4_YEAST	1.3e-11	31.06	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of CSPI02G09810 vs. TrEMBL


Match Name	E-value	Identity	Description
A5BLV0_VITVI	4.3e-78	59.57	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_033389 PE=4 SV=1	[more]
A5AIJ8_VITVI	8.1e-77	57.61	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_031733 PE=4 SV=1	[more]
A5ART6_VITVI	1.2e-75	58.30	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028058 PE=4 SV=1	[more]
A5ALS1_VITVI	2.0e-75	57.14	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001578 PE=4 SV=1	[more]
A0A151T590_CAJCA	2.6e-75	55.56	Uncharacterized protein OS=Cajanus cajan GN=KK1_016743 PE=4 SV=1	[more]

BLAST of CSPI02G09810 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23160.1	2.2e-57	52.79	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.7e-33	47.69	ATMG00810.1 DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	5.5e-24	60.76	ATMG00240.1 Gag-Pol-related retrotransposon family protein	[more]

BLAST of CSPI02G09810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|147816002\|emb\|CAN65808.1\|	6.2e-78	59.57	hypothetical protein VITISV_033389 [Vitis vinifera]	[more]
gi\|923533926\|ref\|XP_013705902.1\|	8.9e-77	55.56	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Brassica napus]	[more]
gi\|147773401\|emb\|CAN73437.1\|	1.2e-76	57.61	hypothetical protein VITISV_031733 [Vitis vinifera]	[more]
gi\|694422107\|ref\|XP_009338880.1\|	1.7e-75	55.56	PREDICTED: uncharacterized protein LOC103931184 [Pyrus x bretschneideri]	[more]
gi\|147857914\|emb\|CAN82526.1\|	1.7e-75	58.30	hypothetical protein VITISV_028058 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI02G09810.1	CSPI02G09810.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 6..163 score: 1.1
None	No IPR available	PANTHER	PTHR11439:SF185	SUBFAMILY NOT NAMED	coord: 6..163 score: 1.1
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 12..193 score: 7.11

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI02G09810	Wild cucumber (PI 183967)	cpicpiB057
CSPI02G09810	Wild cucumber (PI 183967)	cpicpiB070
CSPI02G09810	Cucumber (Gy14) v1	cgycpiB378
CSPI02G09810	Cucumber (Gy14) v1	cgycpiB565
CSPI02G09810	Cucurbita maxima (Rimu)	cmacpiB240
CSPI02G09810	Cucurbita maxima (Rimu)	cmacpiB354
CSPI02G09810	Cucurbita maxima (Rimu)	cmacpiB591
CSPI02G09810	Cucurbita maxima (Rimu)	cmacpiB825
CSPI02G09810	Cucurbita maxima (Rimu)	cmacpiB899
CSPI02G09810	Cucurbita moschata (Rifu)	cmocpiB228
CSPI02G09810	Cucurbita moschata (Rifu)	cmocpiB346
CSPI02G09810	Cucurbita moschata (Rifu)	cmocpiB580
CSPI02G09810	Cucurbita moschata (Rifu)	cmocpiB812
CSPI02G09810	Cucurbita moschata (Rifu)	cmocpiB879
CSPI02G09810	Cucumber (Chinese Long) v2	cpicuB065
CSPI02G09810	Cucumber (Chinese Long) v2	cpicuB069
CSPI02G09810	Cucumber (Chinese Long) v2	cpicuB079
CSPI02G09810	Melon (DHL92) v3.5.1	cpimeB126
CSPI02G09810	Melon (DHL92) v3.5.1	cpimeB141
CSPI02G09810	Melon (DHL92) v3.5.1	cpimeB144
CSPI02G09810	Watermelon (Charleston Gray)	cpiwcgB141
CSPI02G09810	Watermelon (Charleston Gray)	cpiwcgB156
CSPI02G09810	Watermelon (Charleston Gray)	cpiwcgB163
CSPI02G09810	Watermelon (97103) v1	cpiwmB125
CSPI02G09810	Watermelon (97103) v1	cpiwmB121
CSPI02G09810	Watermelon (97103) v1	cpiwmB174
CSPI02G09810	Cucurbita pepo (Zucchini)	cpecpiB126
CSPI02G09810	Cucurbita pepo (Zucchini)	cpecpiB306
CSPI02G09810	Cucurbita pepo (Zucchini)	cpecpiB598
CSPI02G09810	Cucurbita pepo (Zucchini)	cpecpiB851
CSPI02G09810	Bottle gourd (USVL1VR-Ls)	cpilsiB085
CSPI02G09810	Bottle gourd (USVL1VR-Ls)	cpilsiB125
CSPI02G09810	Bottle gourd (USVL1VR-Ls)	cpilsiB127
CSPI02G09810	Melon (DHL92) v3.6.1	cpimedB122
CSPI02G09810	Melon (DHL92) v3.6.1	cpimedB134
CSPI02G09810	Melon (DHL92) v3.6.1	cpimedB137
CSPI02G09810	Cucumber (Gy14) v2	cgybcpiB056
CSPI02G09810	Cucumber (Gy14) v2	cgybcpiB100
CSPI02G09810	Silver-seed gourd	carcpiB0259
CSPI02G09810	Silver-seed gourd	carcpiB0265
CSPI02G09810	Silver-seed gourd	carcpiB0812
CSPI02G09810	Silver-seed gourd	carcpiB0995
CSPI02G09810	Silver-seed gourd	carcpiB1112
CSPI02G09810	Cucumber (Chinese Long) v3	cpicucB080
CSPI02G09810	Cucumber (Chinese Long) v3	cpicucB088
CSPI02G09810	Cucumber (Chinese Long) v3	cpicucB097
CSPI02G09810	Watermelon (97103) v2	cpiwmbB133
CSPI02G09810	Watermelon (97103) v2	cpiwmbB149
CSPI02G09810	Watermelon (97103) v2	cpiwmbB157
CSPI02G09810	Wax gourd	cpiwgoB122
CSPI02G09810	Wax gourd	cpiwgoB127
CSPI02G09810	Wax gourd	cpiwgoB147