CSPI02G09700 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGCAAAGCTTCCATTATCTGTATGGGGTCATGCTATTCTGCATGCAGTGTCACTTAAACGCATAAGAACAACATCTTATCATAAGTACTCCTCGGTACAATTAGCTTATGGTCATGAGCCAAATATTTCTCATTTGCGAATTTTTGGTTGTATAGTATATGTTCCAATTTTTCCACCACAACGTACTAAAATGGGATCTCAAAGAAGGTTAGGAATATATGTTGGATTTGAATTCCCATCAATTATTCAATATCTTGAACCCCTGACAGGTGAGATATTTACTGCACGATTTACTGATTGTCATTTTAAGAAAATAACTTTTTCAACATTAGGGGGATGAATTAAGAAGTTGGAAAATGAAATTGCCTAAAATACATCGTTATTGTCTCATTTAGATCCTTGTACAAGGCAATGTGAACCAAAAGTTCAAAAGATAATTTATTTACAAAATATAGCAAACCAAATGCTGCATACATTTACAGATACTAAAAAAGTGATCGAGTCATATATTCCGGCTGCAAATGCTCCATCTAAAATTAAAATCCCAATTCAGCAAGTTGTTGAATCTGTGTTGCGACAAAAGTGTGGTAGACCAATAGGTTCAAAGAATAAAAATCCTTGAAAAATAAAAGTGATCAATAGTCGAAATGACTTAATTCACAATAAAAACATTTCAGAAGAAGTCTGGGATATAACTAATGATAAAAATGTTGAAGAGACTCAAGTAGATAACAATGAGATCTTGATAAATTATATCATGACAGAAAAAAGATGAAATAGAACTGATATAGTTGTGGACAACATTTTTGCGTATAATGTTGCATATAATATCCTTCATGAAAATGAGCATTCTGAACCTAAATCTATTGACGAAGATTGGCTCGAGTGGAAAGAAGCCTTCCAAGTATAATTGAACTCATTTTCGAAACATGAAGTTTTTGGACATGTAGTTCATACACCTAAAGGTGTAAAACCTCTGGGATTTAAATGGGTATTTGTGTGTAAAAGAAATGAAAACAATGAGGTCACCAGATATAAAACATGACTTGTTGCACAAGGATTTTCTCAAAGACCGGACATTGATTATGAGAAAACATATTCTCCTGTAGTGGATGCTATTACATTAAGATATTTAATTAGTCTGACTGTATGTGAAAAGCCTTATATGCATCTTATGGATGTAGTTACAACATCTCTATATGGATCCTTGGAAAAGGAAATCTATATGAAAATCCCAAAAGGATTTAAGATGTCTGAATCATATAATTCAAAATAAAAAAAATTATATATTCAATCAAATTACAAAGATCATTATATGGATTGAAACAATCAGGACGAATGTGGTACAATCGCTTAAGTGAATATTTATTGAAAGAAAGTTATCGAAATAACCCAATTTGTCCATGTGTTTTTATTAAGAAATCACAGGCAGGATTTGCTATTATAGCTGTATATGTTGATGATTTAAATATAATTGGAACTCCTGAAGAGCTTTTAAAGTCACTAAAATATCTTAAAAAAGAATTTGAGATGAAAGATCTTGACAAAACAAAATTTTGCTTTGGCTTGCAAATCGATCATTTAGTTGATGGAATTTTTATTCATCAATCAACATATACATAAAAGATTTTTAAAAGATTATGCATGGACAAAGCACACCCATTGAACATTCCAATGGTGATTCGATCACTAGATGTGAAAAAGAACATCTTTCGACCTTGAGAAGGTAATGAAGAATTACTTGGTCCTAAAGTACCATACCTTAGTGTAATAGATGCATTAATGTATCTTGCTAATTACACAAGACCGGATATAACATTTTCAGTAAATTTATTAGCAAGATATAATTTTTCTCCAACGAAAAGACATTGAAATGGAGTTAAGCATGTACTTCATTATCTTCGAGGGACGATTGATATGAATTTGTTTTATTCAAACAAATCAAACTTTGATTTAGTTGGTTATGCAGATTCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTACATCTTGGCGATCTGTAA ATGAGAGCAAAGCTTCCATTATCTGTATGGGGTCATGCTATTCTGCATGCAGTGTCACTTAAACGCATAAGAACAACATCTTATCATAAGTACTCCTCGGTACAATTAGCTTATGGTCATGAGCCAAATATTTCTCATTTGCGAATTTTTGGTTGTATAGTATATGTTCCAATTTTTCCACCACAACGTACTAAAATGGGATCTCAAAGAAGGTTAGGAATATATGTTGGATTTGAATTCCCATCAATTATTCAATATCTTGAACCCCTGACAGATACTAAAAAAGTGATCGAGTCATATATTCCGGCTGCAAATGCTCCATCTAAAATTAAAATCCCAATTCAGCAAGTTGTTGAATCTGTGTTGCGACAAAAGTGTGTTGTGGACAACATTTTTGCGTATAATGTTGCATATAATATCCTTCATGAAAATGAGCATTCTGAACCTAAATCTATTGACGAAGATTGGCTCGAGTGGAAAGAAGCCTTCCAAATTCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTACATCTTGGCGATCTGTAA ATGAGAGCAAAGCTTCCATTATCTGTATGGGGTCATGCTATTCTGCATGCAGTGTCACTTAAACGCATAAGAACAACATCTTATCATAAGTACTCCTCGGTACAATTAGCTTATGGTCATGAGCCAAATATTTCTCATTTGCGAATTTTTGGTTGTATAGTATATGTTCCAATTTTTCCACCACAACGTACTAAAATGGGATCTCAAAGAAGGTTAGGAATATATGTTGGATTTGAATTCCCATCAATTATTCAATATCTTGAACCCCTGACAGATACTAAAAAAGTGATCGAGTCATATATTCCGGCTGCAAATGCTCCATCTAAAATTAAAATCCCAATTCAGCAAGTTGTTGAATCTGTGTTGCGACAAAAGTGTGTTGTGGACAACATTTTTGCGTATAATGTTGCATATAATATCCTTCATGAAAATGAGCATTCTGAACCTAAATCTATTGACGAAGATTGGCTCGAGTGGAAAGAAGCCTTCCAAATTCTGGATATTTATTTGACCCACATAAAGCAAGATCTCAAACAGGTTATCTGTTTACATGTGGAGGAACTGCTACATCTTGGCGATCTGTAA
BLAST of CSPI02G09700 vs. TrEMBL
Match: A0A151RXV3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_031006 PE=4 SV=1) HSP 1 Score: 179.9 bits (455), Expect = 3.0e-42 Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = 1
BLAST of CSPI02G09700 vs. TrEMBL
Match: A0A151UD30_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_021468 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. TrEMBL
Match: A0A151SJC6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_001031 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. TrEMBL
Match: A0A151RKM1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_035489 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. TrEMBL
Match: A0A151UBQ7_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) OS=Cajanus cajan GN=KK1_020966 PE=4 SV=1) HSP 1 Score: 154.5 bits (389), Expect = 1.4e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. NCBI nr
Match: gi|1012336081|gb|KYP47392.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]) HSP 1 Score: 179.9 bits (455), Expect = 4.4e-42 Identity = 97/198 (48.99%), Postives = 125/198 (63.13%), Query Frame = 1
BLAST of CSPI02G09700 vs. NCBI nr
Match: gi|1012331625|gb|KYP43092.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. NCBI nr
Match: gi|1012366011|gb|KYP77193.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. NCBI nr
Match: gi|1012343639|gb|KYP54831.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
BLAST of CSPI02G09700 vs. NCBI nr
Match: gi|1012365532|gb|KYP76714.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94, partial [Cajanus cajan]) HSP 1 Score: 154.5 bits (389), Expect = 2.0e-34 Identity = 71/91 (78.02%), Postives = 79/91 (86.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |