CSPI02G04540 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G04540
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRecQ family ATP-dependent DNA helicase
LocationChr2 : 3260962 .. 3267444 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCGGACACGACTTGGAATTGGAGAGAGCTCGGTTGTTAAGCTTGGCAGCGGAACTCGGTTTCGACGAACAATCGGCCCAGGCTTGCTTGGACCGCATAATCAATTTATATGGTAATTCCTTCCATTTCCCAACCCTAAAATTGCACTTTCAGTTTCATCTCTATAACTTTTTTTCTTACTGGAATGAGGACAATGGATTGGAACATCGTTTACTCTATATTTCCTTGATTCTGAGTCTGTTCTGAAGGAATGTGAATTTGGAAACATCTTAAACGTAGCTCTTTTGTTAACTTATGGATTGAGTAAAAGGAACTGTAATTCTTCGTATTTGTTCAGTTTTTTTTCACATCCGAAGTCATGTAACAGGAATTGATGGATAGTTTGAGTGAGAGTATGGTTATATCGACATGACATTGAGTGTATTAGCCTAGCCATTATTATGTTTGATGGATCATAAAATTCCTGTTGAAGCAATTCAATTGGTTTTAAATTTTGCTTGCATGGTATACGTTGAAGGTAATCTGACGGATTAATGGGTTGGATAATGTTATTAGATTTAGACTGATCAGTAATAGTACACCTTCTTAGGGAAAACCTTCCACTTCTACTGAACTGCAAGAATAAACTGAAAAATAAGAGAGAAAGCAACAAAAACTAGGAGCACAAGAATGTGTAAAAACTCCAAATTGGAGAAAAGATCAGAGCAGAAAAAATTTACTCTGTGCAAGATTAATACAATCACAAAAAATAATTATTTCTTCCGATCAAATTATAAGAGCACTCTCTCAAAGCCTTTATACTACTCACATACTTTAGTTTCACTCTCAAACTAGAAAACACAAAAGAGACTTTAACTAGAGTTAGCACACCTAAGCGTAAAGTGTTCCTAATTTAGACGATTTGTAACCGAAGGCATAGACTTCTTTTATAGTTGGATCCCGTGACTTCCTTGTACTTCTTCAACGTGGAATAACTGCACTTCTAAAACCCAACAATTTCAACTCTTCTAGTTGAGCTATTAAAGTGAAAAGTTGGCACTGTCAGTTATTTGTTTATGTATGTGCTTCCTTTTTTAGGTGATGATGGCAAGGAATTTGTCTCTGTTGAGCATTGTGGAGATGATTTTTTGGCTGCTCTAGCAGAATCTGCTCCAGACAATGAGGAATGGGATGATTTACAGGCAATGGAGTCAGAAGCTTGTGGCGCTCTAGATATTATTCTGGATGAAAGTGTCCAGGAAAAAGATGGAGCTCAAAATGTTCATAACAGAGAATGCCCAATCAATATAATAGAGGATTCATCTGAAGGTGAGGAAAATCCAAATTTGGTTAATATCGATTCTTCCAGCGAAAGTGATGAAGATGCAAACTTCAACGCTTCAAAGAAGAGAAATCTTGATTCTAGCACCTCTTATTGTTCCGATCAAGCTACTTCTATACTCACTTCAAGGGTAAACTTCTTCATGAAAATTTATAACATTTTAAATATGAAAGTAAATGGTAAATTATTTTTACTCTAGTTGCTTTAACATAGTACTCTGAAGTAGGTAAATGCAGGCCTAAACACAATATTTTTTACTATTTTATTTTGGATCAAGGCAAGTAATGTATGAAAACATTACTTATTTGGTCCTTGATGACAGTTAAACGTTTAGCTTATTTTAAATACTGACTTAATAAGTAATGTTTGAAGGCTAGCAAAAACAGCACTACTCGGGGTTCAGTTTATTCAAGTCCAGGAGAAAGACAGTACTCTAGAACATCGGAGGCTGGACGCAAGACTCTTACTTATGAAGAGTTACAAACTTTGGATGATTTTGAATTGGCAAATGTTGTTATTTTTGGAAACAAAGCATTCCGACCTCTACAACATGAGGCTTGTAAAGCAGCTGCATCAAAGCAAGATTGTTTTATACTAATGCCAACTGGAGGAGGCAAAAGCTTATGTTACCAGGTCATTTTTCTCTTACTTTCCTACACACCCTTAAAGATCAAGCATAGAAATAGATGGTTAATCAAATGTGTGAATTGCAGTACAGCTGAGGCTGTGGCACTTATAACCAGTCATATTGGATACTTTTTATCGTCATCCCTTTATTTAAGTTTATAGTTCATTCACTTTCTCTTTTTATGTATATGAAGGCATGCTAGAGTTTAAGTTGTTAGGATTTCTTTGTTCCTGATGACTTTTATCTATCTTATTTTTTGAAAATCCTTTCATCGAGGAAGCTTTATTTATCTCAAAAGATAGAGCAACAGAATAGTTTGTGAGATGCACCATATATCTGTAATTAATGTTGCAAATTTTGGCTGCTATGATCCCTAAAATCATCTGGCTGCTACTTCGCTTCCTGAATTATCCATGGCATCAATGCATGTGGTGTGGAATGTTGTAGACTAATGTCATCCATCTTGAGTGCATTGTCCAGTCATTTTTTGCTTTGTAAGTATATTATTAAATTCTTATAGACATTTTAAATCTTTTGTTTATTATTTATTATTTTTTACTTTTATGTGAGTTTTGAAAACTGAAGAGGAGTTTTGAAGGTTTTTTTGTTGATCATATGCATGGCTTTCTGCTTTTTCATCCCGTTTCGTATTTTCACAGTTATTTCTCTCTGTACAGCTGCCTGCAACAGTTCAACCAGGTGTTACTGTTGTCATATCTCCCCTCCTTTCTCTAATTCAAGATCAGATAGTCACATTAAACCTCAAGTTTGGAATTCCCTCAACGTTTTTAAATTCTCAACAAACTTCTTCTCAAGCAGCTGTTGTTCTACAAGAATTGAGGCAAGGTTTACTTCTTTCTCTAGGCATGATATTTGGTGATGTTTTAAATTTAGTAAATTTATGTCCACATTTCTATAATGTATATGATGTATAGTATTCAGAAAGCCGTTTCTTATCTCAGGGAGAATTATATGCATACTACTCTACTTGGATACTTATTTTATTGTTTTCGGAGTTTTTTGGGTCAAGATTCTTTGAGAAAACATGTTGCACGTGCTTTAAGTAATTATATGTGGAAAGTTTCAGAACCTTTTGACACTCATTGAGCATATTTTCAAATTGCGTTTTCTTTTCTCATTTGTAGGAAAGACAAACCTTCATGCAAGCTCTTGTATGTGACTCCTGAGAGAATAGCGACTCAGTCATTTTTGGAGATTCTTAGATTCATGCATATGAAGGTGACCTGTCAGAACTTGCTAAATTAATCTGAAGCAATTTTTATTTCCAACGTAAGATTTCCAAAATTTTCTCTTACAAATAATGTCAAGTTTAAAATATAATGACAGAAACAACTTGCGGGTTTTGTTGTTGATGAAGCACACTGTGTAAGGTATGGCATGCTCTTTGTTTAATTTGTTAACTTTTTGATGAATTAGATTGCTTATAAGTCTTGGAATATAGATGATACCCTAATTTAAGCAATGGGCACTCCATCAATTTTTATTTATTTATTATTGGTCTTTTTAATGTAGGACACAAGACAAATTGTCAAATTATATTCAATTGAAAGAAGAGAACACAGCCTAGAGGCCTTAGGGATGAGAGGTCCCTGAGGCTAAATCAAAGGTTTGAGAAAGGAAGATTGTCAATCTAAATTAATGAGATAACATTGTGTTTAACAAAAAGAATAGTGTAAAGCACTACACGTAGAGGCTGTTAACTGTACACTTCAAAGAAAAAAGAAGAAGATTAAAGAAGATCATTTGAAGTGGTCTTATCTAAGAACAACTGACTATTCTATTCTAACTGCACTTCAAAGTCCTAGCTTTCTCCTTAAACCACCAACTAAAGAGACTCAAAAAAGCTAGCATTATCATCTTTAGGAGGGCAACGGGCCATATCAAAGAGATTGAAGATAGAAATCCAAACCATAAGGCAAAATGGTAACGGAGGTCGTGGTGGTTACTATTTTCAGAACTTCTATTGCAAAGAAGACAAAAGTTAAAAGAGACGAACGATCAAATTTGGTGTCTTCTTTAGATTCTGTCCACAGTGTTGAGACTACTGCGAGCTAGGGACAATAAGAAAATTTTCACTTTCTGGCTGTTTCCTTCCCAAAGCTGCACACCATCCATTTTTGAAGAAGCACCAGTATTAAAGAAGAACTAACATATACATCAATCTAATATGTTATTTAGACTCCGCTGGGAAACCATTTTGTTTTTAGAAATTAAGCTTATAGAAATTACTTACACCTCTAACTTTTTTCCTCTGTATCTACATTCTACCGGTTTAAAGAACCAAGTGAAAATTTAAAAACTAAAGAAAGTGCTTTCTAAATGTTGTTTTTGTTTATAGAAGTTGCTAAAAATTCAACCATTGTACTCAATAAATATGCAGATAATTGTAAGACATAAAGAGGAAATAAACTTAATTTTCAAAACCGAAAATAAAAGGTGAAATGATTACCAAATATGGTCTTAGTGTTCCAATTTTAAGATCATCAGTAATCTGTTTACACGAGGAAGCATGACAATCTGTATAGTAGGTTTTTTCTAATTGAACATGTTTTCTGAAGTATTATATCAAATTGTTGGAGGTTGTGTTGTGTGAAAGTGGAGGAGATAATTAGCAGATAAATGGGAGATAACTTCTTAAATGGCTTTAGAATTTTAGTAAAAAGCTAAATGTGGTGGGATAGATAAATCAGGTTAGTCTTACCTTGATATGATAATCATGCCATAAACTGCTTTCTGTTTTCCAACGATGCAGCCAGTGGGGACATGACTTTCGCCCAGATTATCGAAATCTAGGGTGTCTAAAGCAAAATTTCCCTGATGTTCCAGTGATGGCACTGACTGCAACAGCAACACACTCAGTTCGCGAGGTAACAAGGGATGCCTTAGACCTGACATTTTCTGTTTTGCTTGAAATGGTATTTTCTCATTTCAATCAGTATGCTGCAGGATGTACTAAAAGCTTTAAGAATCCCTCACGCACTCATCCTTGAAAGAAGTTTTGACAGGCCTAACCTGAAGTACGAAGTAGTGTGTAAGACAAAAGAGCCTCTGGTGCAGCTTGGACAGTTCATAAAGGAACGTTTCAAGAACCAGTGTGGAATTGTGTATTGTCTTTCAAAAAGTGAATGTGTAGAGGTATCAGAAACTCTAAATAAAAAATTTAAAATCAAGGCAGCATATTATCATGCTGGTTTAGCTGCTCGACAAAGAGTTTTGGTACAGAAGAAATGGCATGTGGGGGATATTCAGATTGTTTGTGCTACAATTGCCTTTGGCATGGGGATAGATAAGCCAGATGTTGTAAGTTCATTTTATTTTTCACCATCATAATACCAATTTTAGAGTTTGGTTTTGACATTGCATGAATGAATGAATTACAATGACTTCCCTTGGATATAGGTACTGTGTCAATGAGCTTCTTTCTGTCTCTGTCTCTCTCTATAGCACTCCTACAAATTATTGGATTAAATACCACAGCTTTCTTTTTGTCCTGAAAGTTAGGAATTTGTTCCCTTTTTGGTGTTAATCTCTTCTGAAAAGTCGACTTTCTTAATGGTAGCTTTGGAAACTTGGCCGATTTCTTTCACTATGCTTGATGCCTACAAGTAAAGCTATGGTCCAAATCAATCTGTGTCTTTCCTATCCACCACCCTTTAAATTCATCATTGCTTTATGAATTTATAGCTGGCCTCAATTGCTGTAAAACTTTTCTTCTTTTCCATTTCCCGTAGGCTTATCTTAGATCTAACTCTCAATTTTATGCTTAAGCATGTTATATTACTTGCTAATGTATTCATTTGGTCATTATTACATTATTCATCACCCTTTCATTTCTTCATTTATTTGTCCAGCGGTTTGTTATTCACAATACAATGTCAAAATCAATTGAAAGCTACTATCAAGAATCAGGAAGAGCTGGAAGGGATGGTTACCCTGCTTCATGTATTGTCTTGTACCAAAAAAAGGATTTCAGCCGTGTGGTATGCATGTTGCGCAATGCTCAAGGATTTAAAAGTGAAAGTTTTAAGATGTCAATGTCACAAGGAAAGAAAATGCAACAGTTCTGTGAACTCAAGGTTAGTAACTCCATTTCATCATCAAACGTATGCTTTTCCATTATCATCCTTAATTCATCACCATGACAATTCCTGCTCCATTAGTTTTGGTATTTTTAGAACTTTGATTTGTTGATGCAAACTCATCTTCCTGAATTTGTGGCAAAATTTCACAGGATGAATGTCGGAGACAAATGTTGCTTCAGCATTTTGGAGAGTCATTTGATCGAAAAGCATGCAAATATGGCTCTAATCCATGTGATAACTGTCTTAAGAAGTCTTCCTGATAAGCATGTGGCATTTCTAGCTGTTAAAGGCGATTTCAAACTGAAGACCATCTCACCTTAAATCACGGGACAACATTTCAGACCTATGTTATTGGGTCAAGGTGCCTTATAGTGCAGTGGAAATGCATTCTTCTTGACTACAACTGGCCTGTCCGCTTCACAATCCAG

mRNA sequence

ATGGGCGGACACGACTTGGAATTGGAGAGAGCTCGGTTGTTAAGCTTGGCAGCGGAACTCGGTTTCGACGAACAATCGGCCCAGGCTTGCTTGGACCGCATAATCAATTTATATGGTGATGATGGCAAGGAATTTGTCTCTGTTGAGCATTGTGGAGATGATTTTTTGGCTGCTCTAGCAGAATCTGCTCCAGACAATGAGGAATGGGATGATTTACAGGCAATGGAGTCAGAAGCTTGTGGCGCTCTAGATATTATTCTGGATGAAAGTGTCCAGGAAAAAGATGGAGCTCAAAATGTTCATAACAGAGAATGCCCAATCAATATAATAGAGGATTCATCTGAAGGTGAGGAAAATCCAAATTTGGTTAATATCGATTCTTCCAGCGAAAGTGATGAAGATGCAAACTTCAACGCTTCAAAGAAGAGAAATCTTGATTCTAGCACCTCTTATTGTTCCGATCAAGCTACTTCTATACTCACTTCAAGGGCTAGCAAAAACAGCACTACTCGGGGTTCAGTTTATTCAAGTCCAGGAGAAAGACAGTACTCTAGAACATCGGAGGCTGGACGCAAGACTCTTACTTATGAAGAGTTACAAACTTTGGATGATTTTGAATTGGCAAATGTTGTTATTTTTGGAAACAAAGCATTCCGACCTCTACAACATGAGGCTTGTAAAGCAGCTGCATCAAAGCAAGATTGTTTTATACTAATGCCAACTGGAGGAGGCAAAAGCTTATGTTACCAGCTGCCTGCAACAGTTCAACCAGGTGTTACTGTTGTCATATCTCCCCTCCTTTCTCTAATTCAAGATCAGATAGTCACATTAAACCTCAAGTTTGGAATTCCCTCAACGTTTTTAAATTCTCAACAAACTTCTTCTCAAGCAGCTGTTGTTCTACAAGAATTGAGGCAAGACAAACCTTCATGCAAGCTCTTGTATGTGACTCCTGAGAGAATAGCGACTCAGTCATTTTTGGAGATTCTTAGATTCATGCATATGAAGAAACAACTTGCGGGTTTTGTTGTTGATGAAGCACACTGTGTAAGCCAGTGGGGACATGACTTTCGCCCAGATTATCGAAATCTAGGGTGTCTAAAGCAAAATTTCCCTGATGTTCCAGTGATGGCACTGACTGCAACAGCAACACACTCAGTTCGCGAGGATGTACTAAAAGCTTTAAGAATCCCTCACGCACTCATCCTTGAAAGAAGTTTTGACAGGCCTAACCTGAAGTACGAAGTAGTGTGTAAGACAAAAGAGCCTCTGGTGCAGCTTGGACAGTTCATAAAGGAACGTTTCAAGAACCAGTGTGGAATTGTGTATTGTCTTTCAAAAAGTGAATGTGTAGAGGTATCAGAAACTCTAAATAAAAAATTTAAAATCAAGGCAGCATATTATCATGCTGGTTTAGCTGCTCGACAAAGAGTTTTGGTACAGAAGAAATGGCATGTGGGGGATATTCAGATTGTTTGTGCTACAATTGCCTTTGGCATGGGGATAGATAAGCCAGATGTTCGGTTTGTTATTCACAATACAATGTCAAAATCAATTGAAAGCTACTATCAAGAATCAGGAAGAGCTGGAAGGGATGGTTACCCTGCTTCATGTATTGTCTTGTACCAAAAAAAGGATTTCAGCCGTGTGGTATGCATGTTGCGCAATGCTCAAGGATTTAAAAGTGAAAGTTTTAAGATGTCAATGTCACAAGGAAAGAAAATGCAACAGTTCTGTGAACTCAAGGATGAATGTCGGAGACAAATGTTGCTTCAGCATTTTGGAGAGTCATTTGATCGAAAAGCATGCAAATATGGCTCTAATCCATGTGATAACTGTCTTAAGAAGTCTTCCTGA

Coding sequence (CDS)

ATGGGCGGACACGACTTGGAATTGGAGAGAGCTCGGTTGTTAAGCTTGGCAGCGGAACTCGGTTTCGACGAACAATCGGCCCAGGCTTGCTTGGACCGCATAATCAATTTATATGGTGATGATGGCAAGGAATTTGTCTCTGTTGAGCATTGTGGAGATGATTTTTTGGCTGCTCTAGCAGAATCTGCTCCAGACAATGAGGAATGGGATGATTTACAGGCAATGGAGTCAGAAGCTTGTGGCGCTCTAGATATTATTCTGGATGAAAGTGTCCAGGAAAAAGATGGAGCTCAAAATGTTCATAACAGAGAATGCCCAATCAATATAATAGAGGATTCATCTGAAGGTGAGGAAAATCCAAATTTGGTTAATATCGATTCTTCCAGCGAAAGTGATGAAGATGCAAACTTCAACGCTTCAAAGAAGAGAAATCTTGATTCTAGCACCTCTTATTGTTCCGATCAAGCTACTTCTATACTCACTTCAAGGGCTAGCAAAAACAGCACTACTCGGGGTTCAGTTTATTCAAGTCCAGGAGAAAGACAGTACTCTAGAACATCGGAGGCTGGACGCAAGACTCTTACTTATGAAGAGTTACAAACTTTGGATGATTTTGAATTGGCAAATGTTGTTATTTTTGGAAACAAAGCATTCCGACCTCTACAACATGAGGCTTGTAAAGCAGCTGCATCAAAGCAAGATTGTTTTATACTAATGCCAACTGGAGGAGGCAAAAGCTTATGTTACCAGCTGCCTGCAACAGTTCAACCAGGTGTTACTGTTGTCATATCTCCCCTCCTTTCTCTAATTCAAGATCAGATAGTCACATTAAACCTCAAGTTTGGAATTCCCTCAACGTTTTTAAATTCTCAACAAACTTCTTCTCAAGCAGCTGTTGTTCTACAAGAATTGAGGCAAGACAAACCTTCATGCAAGCTCTTGTATGTGACTCCTGAGAGAATAGCGACTCAGTCATTTTTGGAGATTCTTAGATTCATGCATATGAAGAAACAACTTGCGGGTTTTGTTGTTGATGAAGCACACTGTGTAAGCCAGTGGGGACATGACTTTCGCCCAGATTATCGAAATCTAGGGTGTCTAAAGCAAAATTTCCCTGATGTTCCAGTGATGGCACTGACTGCAACAGCAACACACTCAGTTCGCGAGGATGTACTAAAAGCTTTAAGAATCCCTCACGCACTCATCCTTGAAAGAAGTTTTGACAGGCCTAACCTGAAGTACGAAGTAGTGTGTAAGACAAAAGAGCCTCTGGTGCAGCTTGGACAGTTCATAAAGGAACGTTTCAAGAACCAGTGTGGAATTGTGTATTGTCTTTCAAAAAGTGAATGTGTAGAGGTATCAGAAACTCTAAATAAAAAATTTAAAATCAAGGCAGCATATTATCATGCTGGTTTAGCTGCTCGACAAAGAGTTTTGGTACAGAAGAAATGGCATGTGGGGGATATTCAGATTGTTTGTGCTACAATTGCCTTTGGCATGGGGATAGATAAGCCAGATGTTCGGTTTGTTATTCACAATACAATGTCAAAATCAATTGAAAGCTACTATCAAGAATCAGGAAGAGCTGGAAGGGATGGTTACCCTGCTTCATGTATTGTCTTGTACCAAAAAAAGGATTTCAGCCGTGTGGTATGCATGTTGCGCAATGCTCAAGGATTTAAAAGTGAAAGTTTTAAGATGTCAATGTCACAAGGAAAGAAAATGCAACAGTTCTGTGAACTCAAGGATGAATGTCGGAGACAAATGTTGCTTCAGCATTTTGGAGAGTCATTTGATCGAAAAGCATGCAAATATGGCTCTAATCCATGTGATAACTGTCTTAAGAAGTCTTCCTGA
Homology
[Close]
BLAST of CSPI02G04540 vs. Swiss-Prot
Match: RQL1_ARATH (ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana GN=RECQL1 PE=2 SV=1)

HSP 1 Score: 773.9 bits (1997), Expect = 1.4e-222
Identity = 394/619 (63.65%), Postives = 475/619 (76.74%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M   DLELE+ RL+SLA +LGFDE SA+ CLDR ++LYGDDG++F++VE CGDDFLAALA
Sbjct: 1   MKDQDLELEKVRLISLATKLGFDEDSAKKCLDRFVDLYGDDGRDFITVELCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRE----CPINIIEDSSEG 120
           +     EEWDD+QA+ESEA G L  + D+S    D   +  + +      +++IEDS E 
Sbjct: 61  DFEEGTEEWDDIQAIESEAQGNLAEMFDKSTNPSDNGFDTDDDDDDSRVEVHVIEDSPEP 120

Query: 121 EENPNLVNIDSSSE-SDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVY 180
           ++ P +V +DSSS+  D +  F   ++                  T   S + +   SV 
Sbjct: 121 KKKPEIVELDSSSDLEDVETRFKVPRRSQ----------------TCSRSMDYSMEDSVS 180

Query: 181 SSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDC 240
           +  G +   + S    +T +YEELQ LDD E AN+VIFGNK FRPLQH+AC+A+  ++DC
Sbjct: 181 TISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASMERKDC 240

Query: 241 FILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSS 300
           F+LMPTGGGKSLCYQLPAT++ GVT+VISPLLSLIQDQIV LNLKFGIP+TFLNSQQTSS
Sbjct: 241 FVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSS 300

Query: 301 QAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWG 360
           QAA VLQELR+D PSCKLLYVTPE+IA + SFLE LR +  K  LAGFVVDEAHCVSQWG
Sbjct: 301 QAAAVLQELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWG 360

Query: 361 HDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKY 420
           HDFRPDYR LGCLKQNFP VPVMALTATAT SV +DVLK+LRIP A +L+ SFDR NLKY
Sbjct: 361 HDFRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDRINLKY 420

Query: 421 EVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAA 480
           EV+ KTKEPL QL + +++RFK+Q GIVYCLSKSECV+V++ LN+K K+K  YYHAG+ A
Sbjct: 421 EVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPA 480

Query: 481 RQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGY 540
           +QRV VQ+KW  G+++IVCATIAFGMGIDK DVRFVIHNT+SK++ESYYQESGRAGRDG 
Sbjct: 481 KQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGL 540

Query: 541 PASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHF 600
            A CI LYQKKDFSRVVCMLRN QG   + FK +M+Q KKMQQ+CELK ECRRQMLL++F
Sbjct: 541 QAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYF 600

Query: 601 GESFDRKACKYGSNPCDNC 614
           GESFDR  CK   NPCDNC
Sbjct: 601 GESFDRMICKSSLNPCDNC 603

[Close]
BLAST of CSPI02G04540 vs. Swiss-Prot
Match: RQL4A_ARATH (ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.4e-110
Identity = 222/480 (46.25%), Postives = 302/480 (62.92%), Query Frame = 1 

Query: 161 TSRASKNSTTRGSVYSSPGERQY--------SRTSEAGRKTLTYEELQTLDDFELANVVI 220
           T R S  S  R  + S+P ER+         + T  +  K  +  E       E+ N  +
Sbjct: 389 TPRDSSFSVDRYGLSSAPVEREQYVPKIIDVTYTEGSNDKKWSSREFPWTRKLEVNNKKV 448

Query: 221 FGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQD 280
           FGN +FRP Q E   A  S  D F+LMPTGGGKSL YQLPA +  G+T+VISPL+SLIQD
Sbjct: 449 FGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQD 508

Query: 281 QIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILR 340
           QI+ L L+  IP+  L++    ++   + QEL  +    KLLYVTPE++A + S L  L 
Sbjct: 509 QIMNL-LQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLE 568

Query: 341 FMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDV 400
            ++ +  LA FV+DEAHCVSQWGHDFRPDY++LG LKQ FP++PV+ALTATAT SV+EDV
Sbjct: 569 NLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDV 628

Query: 401 LKALRIPHALILERSFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECV 460
           ++AL + + ++  +SF+RPNL Y VV KTK+ L  + +FIKE   ++CGI+YCLS+ +C 
Sbjct: 629 VQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCE 688

Query: 461 EVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVI 520
           +VSE L ++F  KAA+YH  +   QR  +Q +W   +I I+CAT+AFGMGI+KPDVRFVI
Sbjct: 689 KVSERL-QEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVI 748

Query: 521 HNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNA---QGFKSESFKMS 580
           H+++ KSIE Y+QE GRAGRDG  +SC++ Y   D+ RV  M+      Q   +  +   
Sbjct: 749 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRV 808

Query: 581 MSQGK----------KMQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNCLKKSS 619
            S G+          +M ++CE + ECRR + L H GE FD   CK     CDNC    S
Sbjct: 809 ASSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCK---KTCDNCCSSQS 863

[Close]
BLAST of CSPI02G04540 vs. Swiss-Prot
Match: RQL4B_ARATH (ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 7.2e-107
Identity = 236/579 (40.76%), Postives = 339/579 (58.55%), Query Frame = 1 

Query: 54  DFLAALAESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRE-----CPIN 113
           D L A++    DN    DL     E      ++L + +Q+ +    +HN+E     C ++
Sbjct: 308 DTLLAISNEILDNTY--DLGPDHVEQLHQKRLLLKKQIQQLEIL--IHNKERKKSQCLVS 367

Query: 114 IIEDSSEGEENPNLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNS 173
           I   +++  E P   N++      +       + R +  + +   D   S      S  S
Sbjct: 368 IPSHNTQ-YETPQTTNLEVVYGQTDSPTHVKEQGRCVTDNWNMPRDYLVSKERYDISSGS 427

Query: 174 TTRGSVYSSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKA 233
             R    S   +   + T  +  K  T  +     + E+ N ++FGN +FRP Q E   A
Sbjct: 428 EEREQSVSEVID--VTDTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQREIINA 487

Query: 234 AASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFL 293
             S  D F+LMPTGGGKSL YQLPA +  G+T+VISPL+SLIQDQI+ L L+  I +  L
Sbjct: 488 TMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNL-LQTNISAASL 547

Query: 294 NSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEA 353
           ++    ++   +LQEL  +K   KLLYVTPE++A ++S L  L  ++ +  LA FV+DEA
Sbjct: 548 SAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEA 607

Query: 354 HCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSF 413
           HCVSQWGHDFRPDY+ LG LKQ FP++P++ALTATAT SV+EDV++AL + + ++  +SF
Sbjct: 608 HCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSF 667

Query: 414 DRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAY 473
           +RPNL Y VV KT + L  + +FI+E   ++CGI+YCLS+ +C +V+E L + F  KAA+
Sbjct: 668 NRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEAL-RVFGHKAAF 727

Query: 474 YHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESG 533
           YH  +   +R  VQK+W   +I I+CAT+AFGMGI+KPDVRFVIH+++ KSIE Y+QE G
Sbjct: 728 YHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 787

Query: 534 RAGRDGYPASCIVLYQKKDFSRVVCMLRN---AQGFKSESFKMSMSQGK----------K 593
           RAGRDG  +SC++ Y   D+ RV  M+      QG     +    S G+          +
Sbjct: 788 RAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLR 847

Query: 594 MQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNC 614
           M  +CE + +CRR + L H GE FD   CK   N CDNC
Sbjct: 848 MVSYCENEVDCRRFLQLVHLGEKFDSTNCK---NTCDNC 874

[Close]
BLAST of CSPI02G04540 vs. Swiss-Prot
Match: BLM_XENLA (Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 9.1e-102
Identity = 198/411 (48.18%), Postives = 266/411 (64.72%), Query Frame = 1 

Query: 213  FGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQD 272
            FG   FR  Q EA  A    +DCFILMPTGGGKSLCYQLP  + PGVT+VISPL SLI D
Sbjct: 615  FGLHRFRTNQLEAINACLCGEDCFILMPTGGGKSLCYQLPGCISPGVTIVISPLRSLIVD 674

Query: 273  QIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERI-ATQSFLEILR 332
            Q+  L     IP+T+L   +T ++AA +  +L +  P  KLLYVTPE++ A+   +  + 
Sbjct: 675  QVQKLT-SLDIPATYLTGDKTDAEAASIYLQLSKKDPIIKLLYVTPEKVCASTRLISTME 734

Query: 333  FMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDV 392
             ++ ++ LA FV+DEAHCVSQWGHDFRPDY+ L  L+Q F  VP+MALTATA   V++D+
Sbjct: 735  NLYERQLLARFVIDEAHCVSQWGHDFRPDYKRLNVLRQKFQSVPMMALTATANPRVKKDI 794

Query: 393  LKALRIPHALILERSFDRPNLKYEVV-CKTKEPLVQLGQFIKERFKNQCGIVYCLSKSEC 452
            L  L++    I   SF+R NLKYEV+  K K   +   ++IK+   N  GI+YCLS+ EC
Sbjct: 795  LNQLKMTKPQIFTMSFNRDNLKYEVLPKKPKRVALDCVEWIKKHHPNDSGIIYCLSRHEC 854

Query: 453  VEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKW-HVGDIQIVCATIAFGMGIDKPDVRF 512
              +++TL K+  + A  YHAGLA   R  VQ KW +  D Q++CATIAFGMGIDKPDVR+
Sbjct: 855  DTMADTLQKE-GLAALAYHAGLADSNRDYVQHKWINQDDCQVICATIAFGMGIDKPDVRY 914

Query: 513  VIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSM 572
            VIH ++ KS+E YYQESGRAGRDG  + C++ Y   D +R+  +++  +   S + +   
Sbjct: 915  VIHASLPKSVEGYYQESGRAGRDGETSHCLLFYSYHDVTRIRRLIQMEKDGNSHTKQTHF 974

Query: 573  SQGKKMQQFCELKDECRRQMLLQHFGE-SFDRKACK-YGSNPCDNCLKKSS 619
            +    M  +CE   ECRR  LL +FGE +F+   CK +    CDNCL K +
Sbjct: 975  NNLYSMVHYCENVVECRRMQLLSYFGENNFNPNFCKEHTQVACDNCLGKKN 1023

[Close]
BLAST of CSPI02G04540 vs. Swiss-Prot
Match: BLM_MOUSE (Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1)

HSP 1 Score: 362.8 bits (930), Expect = 7.2e-99
Identity = 199/408 (48.77%), Postives = 263/408 (64.46%), Query Frame = 1 

Query: 213  FGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQD 272
            FG   FR  Q EA  AA   +DCFILMPTGGGKSLCYQLPA V PGVT+VISPL SLI D
Sbjct: 671  FGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTIVISPLRSLIVD 730

Query: 273  QIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERI-ATQSFLEILR 332
            Q+  L   F IP+T+L   +T S+AA +  +L +  P  KLLYVTPE++ A+   +  L 
Sbjct: 731  QVQKLT-SFDIPATYLTGDKTDSEAANIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLE 790

Query: 333  FMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDV 392
             ++ +K LA FV+DEAHCVSQWGHDFR DY+ +  L+Q FP VPVMALTATA   V++D+
Sbjct: 791  NLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDI 850

Query: 393  LKALRIPHALILERSFDRPNLKYEVV-CKTKEPLVQLGQFIKERFKNQCGIVYCLSKSEC 452
            L  L+I    +   SF+R NLKY V+  K K+      ++I++      GI+YCLS+ EC
Sbjct: 851  LTQLKILRPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRREC 910

Query: 453  VEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKW-HVGDIQIVCATIAFGMGIDKPDVRF 512
              +++TL ++  + A  YHAGL+   R  VQ KW +  + Q++CATIAFGMGIDKPDVRF
Sbjct: 911  DTMADTLQRE-GLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAFGMGIDKPDVRF 970

Query: 513  VIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSM 572
            VIH ++ KS+E YYQESGRAGRDG  + C++ Y   D +R+  ++   +     + +  +
Sbjct: 971  VIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEKDGNYHTKETHV 1030

Query: 573  SQGKKMQQFCELKDECRRQMLLQHFGE-SFDRKAC-KYGSNPCDNCLK 616
            +    M  +CE   ECRR  LL +FGE  F+   C KY    CDNC K
Sbjct: 1031 NNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNCCK 1076

[Close]
BLAST of CSPI02G04540 vs. TrEMBL
Match: A0A0A0LLZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033360 PE=4 SV=1)

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 616/618 (99.68%), Postives = 617/618 (99.84%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA
Sbjct: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP
Sbjct: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180
           NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE
Sbjct: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180

Query: 181 RQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240
           RQYSRTSEAG KTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP
Sbjct: 181 RQYSRTSEAGPKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240

Query: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300
           TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV
Sbjct: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300

Query: 301 LQELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360
           LQELR+DKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD
Sbjct: 301 LQELRKDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360

Query: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420
           YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT
Sbjct: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420

Query: 421 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV 480
           KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV
Sbjct: 421 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV 480

Query: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540
           QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV
Sbjct: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540

Query: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600
           LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR
Sbjct: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600

Query: 601 KACKYGSNPCDNCLKKSS 619
           KACKYGSNPCDNCLKKSS
Sbjct: 601 KACKYGSNPCDNCLKKSS 618

[Close]
BLAST of CSPI02G04540 vs. TrEMBL
Match: A0A061FAW8_THECC (RECQ helicase l1 OS=Theobroma cacao GN=TCM_026744 PE=4 SV=1)

HSP 1 Score: 889.8 bits (2298), Expect = 1.9e-255
Identity = 447/619 (72.21%), Postives = 521/619 (84.17%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M GHD ELE+ARLLSLA E GFDEQSA+  LDR+I+LYGDDG++F++VEHCGDDFLAALA
Sbjct: 1   MNGHDFELEKARLLSLALEFGFDEQSAKKSLDRLISLYGDDGRDFITVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDD-LQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEEN 120
           E+  D+E+WDD LQA+ESEACGAL+ + D++        +  N    INII+DS E ++ 
Sbjct: 61  ETMQDSEDWDDDLQAVESEACGALNNMFDKNALCNGKIDSNRNERIYINIIDDSPERKKQ 120

Query: 121 PNLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPG 180
            N + +DSSS+ DE  +   SKK+   S+ S   DQ++ +     SK S T+GSV S  G
Sbjct: 121 TNFMELDSSSD-DEVLDLRISKKKGDSSTLSSRLDQSSCV----GSKTSVTQGSVSSISG 180

Query: 181 ERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILM 240
           ++ +S TS  G  TL+YEELQ LDDFELANVVIFGN++FRPLQH+ACK++  KQDCFILM
Sbjct: 181 KKHFSTTSMGGHGTLSYEELQALDDFELANVVIFGNRSFRPLQHQACKSSLVKQDCFILM 240

Query: 241 PTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAV 300
           PTGGGKSLCYQLPAT++PGVTVVISPLLSLIQDQI+TLNLKFGIP+TFLNSQQ++SQAA 
Sbjct: 241 PTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQQSASQAAA 300

Query: 301 VLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFR 360
           VLQELR+D PSCKLLYVTPER+   QSFLE+L+ +H K QLAGFVVDEAHCVSQWGHDFR
Sbjct: 301 VLQELRKDNPSCKLLYVTPERVVGNQSFLEVLKCLHRKGQLAGFVVDEAHCVSQWGHDFR 360

Query: 361 PDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVC 420
           PDYR LGCLKQ+FP+VPVMALTATATHSVRED+L ALRIPHAL+L+ SFDRPNLKYEV+ 
Sbjct: 361 PDYRGLGCLKQHFPNVPVMALTATATHSVREDILNALRIPHALVLKTSFDRPNLKYEVIG 420

Query: 421 KTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRV 480
           K K+ L QLGQ +++RFKNQCGIVYCLSK+EC EVS  LN+K KI+  YYHAGLAARQRV
Sbjct: 421 KAKDSLKQLGQLLQDRFKNQCGIVYCLSKNECAEVSNFLNEKCKIRTVYYHAGLAARQRV 480

Query: 481 LVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASC 540
            VQKKW+ G++QIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRD  PA C
Sbjct: 481 TVQKKWYEGEVQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNCPAVC 540

Query: 541 IVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESF 600
           I LYQKKDFSRVVCMLRN QG KS+SFK +M+Q +KMQQ+CELKDECRRQMLL+HFGESF
Sbjct: 541 IALYQKKDFSRVVCMLRNGQGSKSKSFKTAMAQAQKMQQYCELKDECRRQMLLEHFGESF 600

Query: 601 DRKACKYGSNPCDNCLKKS 618
           DRK CK+GSNPCDNCL+ S
Sbjct: 601 DRKDCKHGSNPCDNCLRTS 614

[Close]
BLAST of CSPI02G04540 vs. TrEMBL
Match: V4V4B8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000586mg PE=4 SV=1)

HSP 1 Score: 867.1 bits (2239), Expect = 1.3e-248
Identity = 438/627 (69.86%), Postives = 513/627 (81.82%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M  HD E E+ARLLSLA E GFD+ SA   L+R+I+LYGDDG++F+SVEHCGDDF+A LA
Sbjct: 1   MDCHDFEFEKARLLSLALEFGFDQDSANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           E+  D+EEWDDLQAMESEACGAL+ + D+ V + + A +  N    I+I++DS E +  P
Sbjct: 61  ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSREYIDILDDSPEPKRRP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNST---------TR 180
            L+ +DS S++ ED +F   K ++   + S C D  + I T  + K+S+         + 
Sbjct: 121 TLMELDSLSDT-EDLDFTIPKHKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST 180

Query: 181 GSVYSSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAAS 240
            S  S   +++ S  S+    TL++EELQ LDD E ANVVIFGN+AFRPLQH+ACKA+ +
Sbjct: 181 SSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVA 240

Query: 241 KQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQ 300
           KQDCF+L+PTGGGKSLCYQLPAT++ GVTVVISPLLSLIQDQI+TLNLKFGIP+TFLNSQ
Sbjct: 241 KQDCFVLLPTGGGKSLCYQLPATLKSGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQ 300

Query: 301 QTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCV 360
           QT SQAA VLQELR+DKPSCKLLYVTPERI   QSF E+L+ +H K+QLAGFVVDEAHCV
Sbjct: 301 QTVSQAAAVLQELRKDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKRQLAGFVVDEAHCV 360

Query: 361 SQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRP 420
           SQWGHDFRPDYR LG LKQNFPDVPVMALTATAT SVR+D+LKALRIPHAL+LE SFDRP
Sbjct: 361 SQWGHDFRPDYRGLGLLKQNFPDVPVMALTATATQSVRQDILKALRIPHALVLETSFDRP 420

Query: 421 NLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHA 480
           NLKYEV+ K+KE L Q+GQ IK+RFK+QCGI+YCLSK+ECVEVS  L +K KIK  YYHA
Sbjct: 421 NLKYEVIGKSKEALKQIGQLIKDRFKDQCGIIYCLSKNECVEVSNFLIQKCKIKTVYYHA 480

Query: 481 GLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAG 540
           GLAARQRV+VQKKWH GD+QIVCATIAFGMGIDKPDVRFVIHNT+SKSIESYYQESGRAG
Sbjct: 481 GLAARQRVVVQKKWHTGDVQIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAG 540

Query: 541 RDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQML 600
           RD  P+ CIVLYQKKDFSRVVCMLRN QGFKSE+FK +M+Q KKMQQ+CE K ECRRQ L
Sbjct: 541 RDNLPSVCIVLYQKKDFSRVVCMLRNGQGFKSEAFKTAMAQAKKMQQYCEQKAECRRQTL 600

Query: 601 LQHFGESFDRKACKYGSNPCDNCLKKS 618
           L+HFGESFDRKACK GSNPCDNCLK S
Sbjct: 601 LEHFGESFDRKACKNGSNPCDNCLKTS 626

[Close]
BLAST of CSPI02G04540 vs. TrEMBL
Match: M5W242_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015447mg PE=4 SV=1)

HSP 1 Score: 861.7 bits (2225), Expect = 5.5e-247
Identity = 436/618 (70.55%), Postives = 504/618 (81.55%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M GHDLE+E+ARLLSLA   GFDE+SA+ CLDR+++LYGDDG +F++VEHCGDDFLAALA
Sbjct: 1   MEGHDLEMEKARLLSLALNSGFDEESAKKCLDRLVDLYGDDGLDFITVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           ES  D EEWDD+QAME+EACG L+ + D+ +   +   +   +   IN++EDS E ++ P
Sbjct: 61  ESMQDTEEWDDIQAMETEACGVLNNMFDKDILNGNEPDDDRGK---INMVEDSPERQKYP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180
           N + +DSS +S+ED                               ++S TR SV S   +
Sbjct: 121 NFLLLDSS-DSEEDC------------------------------ESSITRDSVPSISSK 180

Query: 181 RQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240
           +Q +RTS+   KT TYEELQ LDD ELANVVIFGNK FRPLQH+ACKAA  K+DCFILMP
Sbjct: 181 KQCARTSKYESKTPTYEELQALDDAELANVVIFGNKIFRPLQHQACKAAMEKRDCFILMP 240

Query: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300
           TGGGKSLCYQLPAT++ GVTVV+SPLLSLIQDQI+TLNLKFG+P+TFLNSQQT+SQAA V
Sbjct: 241 TGGGKSLCYQLPATLKQGVTVVVSPLLSLIQDQIITLNLKFGVPATFLNSQQTTSQAAAV 300

Query: 301 LQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRP 360
           LQELR+DKPSCKLLYVTPERIA   SFLE+L+ +H K QLAGFVVDEAHCVSQWGHDFRP
Sbjct: 301 LQELRKDKPSCKLLYVTPERIAGNPSFLEVLKCLHSKAQLAGFVVDEAHCVSQWGHDFRP 360

Query: 361 DYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCK 420
           DYR LGCLKQ F DVPVMALTATATHSVRED+LKALRIP AL+LERSFDRPNLKYEV+ K
Sbjct: 361 DYRGLGCLKQIFCDVPVMALTATATHSVREDILKALRIPRALVLERSFDRPNLKYEVIGK 420

Query: 421 TKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVL 480
           TKE L QLGQ +  RF++Q GI+YCLSKSECVEVS  LN+KFKIK AYYHAG+AARQRV 
Sbjct: 421 TKESLKQLGQLLMSRFQDQSGIIYCLSKSECVEVSNFLNEKFKIKTAYYHAGIAARQRVA 480

Query: 481 VQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCI 540
           VQKKW+ G++QIVCATIAFGMGIDKPDVRFVIHNT+SKSIESYYQESGRAGRD  PA CI
Sbjct: 481 VQKKWYTGEVQIVCATIAFGMGIDKPDVRFVIHNTISKSIESYYQESGRAGRDDLPAVCI 540

Query: 541 VLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFD 600
           VLYQKKDFSRVVC+LRN QG KS+SFK +M+Q +KMQ++CELK +CRRQMLL+HFGESFD
Sbjct: 541 VLYQKKDFSRVVCLLRNGQGCKSQSFKTAMAQAQKMQEYCELKTQCRRQMLLKHFGESFD 584

Query: 601 RKACKYGSNPCDNCLKKS 618
             ACK GSNPCDNCLK S
Sbjct: 601 ENACKCGSNPCDNCLKAS 584

[Close]
BLAST of CSPI02G04540 vs. TrEMBL
Match: A9PK87_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 860.9 bits (2223), Expect = 9.4e-247
Identity = 435/619 (70.27%), Postives = 513/619 (82.88%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           MGG DLELERAR LSLA E GFDE+SA  CLDR+I+LYG+DG++F++VE CGDDFL ALA
Sbjct: 1   MGGRDLELERARFLSLALEFGFDEESANKCLDRLISLYGEDGQDFITVECCGDDFLVALA 60

Query: 61  ESAPDNEEW--DDLQAMESEACGALDIILDESVQEKDG-AQNVHNRECPINIIEDSSEGE 120
           ES  D E+W  DDLQ +ESEACG L  + +E V++ +  A +  N    I++ +DS E +
Sbjct: 61  ESMQDTEDWGDDDLQIIESEACGTLTNMFEEHVEKNNNKANDDDNSRTYIDVTDDSPEPK 120

Query: 121 ENPNLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSS 180
           +    + +DSSS+S+E+ +F+  ++ N D  T         I  S   K+S T+GSV S 
Sbjct: 121 KTRTFMELDSSSDSEEEPDFSL-EEENHDLFTPL----TKRISGSLDCKSSVTQGSVSSV 180

Query: 181 PGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFI 240
             +RQ  R S+   ++L YEELQ LDDFELANVVIFGNK FRPLQH+ACKA  +KQDCF+
Sbjct: 181 GNKRQCPRMSKDDHRSLNYEELQALDDFELANVVIFGNKTFRPLQHQACKATVAKQDCFV 240

Query: 241 LMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQA 300
           LMPTGGGKSLCYQLPAT++PGVTVVISPLLSLIQDQI+TLNLKFGI +TFLNSQQTS+QA
Sbjct: 241 LMPTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIRATFLNSQQTSAQA 300

Query: 301 AVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHD 360
           A +LQELR+DKPSCKLLYVTPERIA   +FLEIL+ +H+K QLAGFVVDEAHCVSQWGHD
Sbjct: 301 AAILQELRKDKPSCKLLYVTPERIAGNPAFLEILKCLHLKGQLAGFVVDEAHCVSQWGHD 360

Query: 361 FRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEV 420
           FRPDY+ LGCLKQNFP VPVMALTATATHSVRED+LK LRIP AL+LE SFDRPNLKYEV
Sbjct: 361 FRPDYKRLGCLKQNFPVVPVMALTATATHSVREDILKTLRIPGALVLETSFDRPNLKYEV 420

Query: 421 VCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQ 480
           + KTKE L QLG  +++RFKNQCGIVYCLSK+ECVEVS+ LN+K KIKA YYHAGL ARQ
Sbjct: 421 IGKTKESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQ 480

Query: 481 RVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPA 540
           RV VQ+KWH G++ IVCATIAFGMGIDKPDVRFVIHNT+SKSIESYYQESGRAGRD +PA
Sbjct: 481 RVDVQRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPA 540

Query: 541 SCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGE 600
           +CI LYQKKDFSRVVCMLR+ QG+K ESFK +M+Q +KM+ +CELK ECRRQ+LL+HFGE
Sbjct: 541 TCIALYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKAECRRQVLLEHFGE 600

Query: 601 SFDRKACKYGSNPCDNCLK 616
           SFD+KACK+GS+PCDNCLK
Sbjct: 601 SFDQKACKFGSHPCDNCLK 614

[Close]
BLAST of CSPI02G04540 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 773.9 bits (1997), Expect = 7.7e-224
Identity = 394/619 (63.65%), Postives = 475/619 (76.74%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M   DLELE+ RL+SLA +LGFDE SA+ CLDR ++LYGDDG++F++VE CGDDFLAALA
Sbjct: 1   MKDQDLELEKVRLISLATKLGFDEDSAKKCLDRFVDLYGDDGRDFITVELCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRE----CPINIIEDSSEG 120
           +     EEWDD+QA+ESEA G L  + D+S    D   +  + +      +++IEDS E 
Sbjct: 61  DFEEGTEEWDDIQAIESEAQGNLAEMFDKSTNPSDNGFDTDDDDDDSRVEVHVIEDSPEP 120

Query: 121 EENPNLVNIDSSSE-SDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVY 180
           ++ P +V +DSSS+  D +  F   ++                  T   S + +   SV 
Sbjct: 121 KKKPEIVELDSSSDLEDVETRFKVPRRSQ----------------TCSRSMDYSMEDSVS 180

Query: 181 SSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDC 240
           +  G +   + S    +T +YEELQ LDD E AN+VIFGNK FRPLQH+AC+A+  ++DC
Sbjct: 181 TISGRKPSVQISNKDHETPSYEELQALDDLEFANLVIFGNKVFRPLQHQACRASMERKDC 240

Query: 241 FILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSS 300
           F+LMPTGGGKSLCYQLPAT++ GVT+VISPLLSLIQDQIV LNLKFGIP+TFLNSQQTSS
Sbjct: 241 FVLMPTGGGKSLCYQLPATLKAGVTIVISPLLSLIQDQIVALNLKFGIPATFLNSQQTSS 300

Query: 301 QAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWG 360
           QAA VLQELR+D PSCKLLYVTPE+IA + SFLE LR +  K  LAGFVVDEAHCVSQWG
Sbjct: 301 QAAAVLQELRRDNPSCKLLYVTPEKIAGSSSFLETLRCLDRKGLLAGFVVDEAHCVSQWG 360

Query: 361 HDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKY 420
           HDFRPDYR LGCLKQNFP VPVMALTATAT SV +DVLK+LRIP A +L+ SFDR NLKY
Sbjct: 361 HDFRPDYRELGCLKQNFPRVPVMALTATATESVCQDVLKSLRIPRAPVLKMSFDRINLKY 420

Query: 421 EVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAA 480
           EV+ KTKEPL QL + +++RFK+Q GIVYCLSKSECV+V++ LN+K K+K  YYHAG+ A
Sbjct: 421 EVIVKTKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHAGVPA 480

Query: 481 RQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGY 540
           +QRV VQ+KW  G+++IVCATIAFGMGIDK DVRFVIHNT+SK++ESYYQESGRAGRDG 
Sbjct: 481 KQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGL 540

Query: 541 PASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHF 600
            A CI LYQKKDFSRVVCMLRN QG   + FK +M+Q KKMQQ+CELK ECRRQMLL++F
Sbjct: 541 QAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYF 600

Query: 601 GESFDRKACKYGSNPCDNC 614
           GESFDR  CK   NPCDNC
Sbjct: 601 GESFDRMICKSSLNPCDNC 603

[Close]
BLAST of CSPI02G04540 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 401.7 bits (1031), Expect = 7.9e-112
Identity = 222/480 (46.25%), Postives = 302/480 (62.92%), Query Frame = 1 

Query: 161 TSRASKNSTTRGSVYSSPGERQY--------SRTSEAGRKTLTYEELQTLDDFELANVVI 220
           T R S  S  R  + S+P ER+         + T  +  K  +  E       E+ N  +
Sbjct: 389 TPRDSSFSVDRYGLSSAPVEREQYVPKIIDVTYTEGSNDKKWSSREFPWTRKLEVNNKKV 448

Query: 221 FGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQD 280
           FGN +FRP Q E   A  S  D F+LMPTGGGKSL YQLPA +  G+T+VISPL+SLIQD
Sbjct: 449 FGNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQLPALICGGITLVISPLVSLIQD 508

Query: 281 QIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILR 340
           QI+ L L+  IP+  L++    ++   + QEL  +    KLLYVTPE++A + S L  L 
Sbjct: 509 QIMNL-LQANIPAASLSAGMEWAEQLKIFQELNSEHSKYKLLYVTPEKVAKSDSLLRHLE 568

Query: 341 FMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDV 400
            ++ +  LA FV+DEAHCVSQWGHDFRPDY++LG LKQ FP++PV+ALTATAT SV+EDV
Sbjct: 569 NLNSRGLLARFVIDEAHCVSQWGHDFRPDYQSLGILKQKFPNIPVLALTATATASVKEDV 628

Query: 401 LKALRIPHALILERSFDRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECV 460
           ++AL + + ++  +SF+RPNL Y VV KTK+ L  + +FIKE   ++CGI+YCLS+ +C 
Sbjct: 629 VQALGLVNCVVFRQSFNRPNLWYSVVPKTKKCLEDIDKFIKENHFDECGIIYCLSRMDCE 688

Query: 461 EVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVI 520
           +VSE L ++F  KAA+YH  +   QR  +Q +W   +I I+CAT+AFGMGI+KPDVRFVI
Sbjct: 689 KVSERL-QEFGHKAAFYHGSMEPEQRAFIQTQWSKDEINIICATVAFGMGINKPDVRFVI 748

Query: 521 HNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNA---QGFKSESFKMS 580
           H+++ KSIE Y+QE GRAGRDG  +SC++ Y   D+ RV  M+      Q   +  +   
Sbjct: 749 HHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYNRV 808

Query: 581 MSQGK----------KMQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNCLKKSS 619
            S G+          +M ++CE + ECRR + L H GE FD   CK     CDNC    S
Sbjct: 809 ASSGRLLETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCK---KTCDNCCSSQS 863

[Close]
BLAST of CSPI02G04540 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 389.4 bits (999), Expect = 4.1e-108
Identity = 236/579 (40.76%), Postives = 339/579 (58.55%), Query Frame = 1 

Query: 54  DFLAALAESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRE-----CPIN 113
           D L A++    DN    DL     E      ++L + +Q+ +    +HN+E     C ++
Sbjct: 308 DTLLAISNEILDNTY--DLGPDHVEQLHQKRLLLKKQIQQLEIL--IHNKERKKSQCLVS 367

Query: 114 IIEDSSEGEENPNLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNS 173
           I   +++  E P   N++      +       + R +  + +   D   S      S  S
Sbjct: 368 IPSHNTQ-YETPQTTNLEVVYGQTDSPTHVKEQGRCVTDNWNMPRDYLVSKERYDISSGS 427

Query: 174 TTRGSVYSSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKA 233
             R    S   +   + T  +  K  T  +     + E+ N ++FGN +FRP Q E   A
Sbjct: 428 EEREQSVSEVID--VTDTESSNDKKWTSSDFPWTKNLEVYNKLVFGNHSFRPNQREIINA 487

Query: 234 AASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFL 293
             S  D F+LMPTGGGKSL YQLPA +  G+T+VISPL+SLIQDQI+ L L+  I +  L
Sbjct: 488 TMSGCDVFVLMPTGGGKSLTYQLPALLCAGITLVISPLVSLIQDQIMNL-LQTNISAASL 547

Query: 294 NSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEA 353
           ++    ++   +LQEL  +K   KLLYVTPE++A ++S L  L  ++ +  LA FV+DEA
Sbjct: 548 SAGMEWAEQLEILQELSSEKSKYKLLYVTPEKVAKSESLLRHLEILNSRSLLARFVIDEA 607

Query: 354 HCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSF 413
           HCVSQWGHDFRPDY+ LG LKQ FP++P++ALTATAT SV+EDV++AL + + ++  +SF
Sbjct: 608 HCVSQWGHDFRPDYQGLGVLKQKFPNIPMLALTATATTSVKEDVVQALGLVNCVVFRQSF 667

Query: 414 DRPNLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAY 473
           +RPNL Y VV KT + L  + +FI+E   ++CGI+YCLS+ +C +V+E L + F  KAA+
Sbjct: 668 NRPNLWYSVVPKTNKCLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEAL-RVFGHKAAF 727

Query: 474 YHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESG 533
           YH  +   +R  VQK+W   +I I+CAT+AFGMGI+KPDVRFVIH+++ KSIE Y+QE G
Sbjct: 728 YHGSMDPGKRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECG 787

Query: 534 RAGRDGYPASCIVLYQKKDFSRVVCMLRN---AQGFKSESFKMSMSQGK----------K 593
           RAGRDG  +SC++ Y   D+ RV  M+      QG     +    S G+          +
Sbjct: 788 RAGRDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLR 847

Query: 594 MQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNC 614
           M  +CE + +CRR + L H GE FD   CK   N CDNC
Sbjct: 848 MVSYCENEVDCRRFLQLVHLGEKFDSTNCK---NTCDNC 874

[Close]
BLAST of CSPI02G04540 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 339.0 bits (868), Expect = 6.3e-93
Identity = 181/403 (44.91%), Postives = 255/403 (63.28%), Query Frame = 1 

Query: 213 FGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQD 272
           FG+  FR  Q EA +A  S +DCF LMPTGGGKS+CYQ+PA  +PG+ +V+SPL++L+++
Sbjct: 32  FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQIPALAKPGIVLVVSPLIALMEN 91

Query: 273 QIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIATQSFLEILRF 332
           Q++ L  K GI + +L+S Q +     + ++L   KPS +LLYVTPE IAT+ F+  LR 
Sbjct: 92  QVMALKEK-GIAAEYLSSTQATHVKNKIHEDLDSGKPSVRLLYVTPELIATKGFMLKLRK 151

Query: 333 MHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVL 392
           +H +  L    +DEAHC+S WGHDFRP YR L  L+ +  DVPV+ALTATA   V++DV+
Sbjct: 152 LHSRGLLNLIAIDEAHCISSWGHDFRPSYRQLSTLRDSLADVPVLALTATAAPKVQKDVI 211

Query: 393 KALRIPHALILERSFDRPNLKYEVVCK--TKEPLVQLGQFIKERFKNQCGIVYCLSKSEC 452
            +L + + L+L+ SF+RPN+ YEV  K         LG  +K    N C I+YCL ++ C
Sbjct: 212 DSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTDLGNLLKS-CGNICAIIYCLERTTC 271

Query: 453 VEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFV 512
            ++S  L+    I +A YHAGL ++ R  V   W     QI+ AT+AFGMGIDK DVR V
Sbjct: 272 DDLSVHLS-SIGISSAAYHAGLNSKMRSTVLDDWLSSKKQIIVATVAFGMGIDKKDVRMV 331

Query: 513 IHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMS 572
            H  + KS+ES+YQESGRAGRD  P+  ++ Y   D  ++  +LRN++  KS S K   S
Sbjct: 332 CHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLLRNSENKKSSSSKKPTS 391

Query: 573 QGKKMQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNC 614
             +++  +CE    CRR+ +L+ FGE F  + CK     CD C
Sbjct: 392 DFEQIVTYCE-GSGCRRKKILESFGEEFPVQQCK---KTCDAC 427

[Close]
BLAST of CSPI02G04540 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 321.6 bits (823), Expect = 1.0e-87
Identity = 175/411 (42.58%), Postives = 251/411 (61.07%), Query Frame = 1 

Query: 212 IFGNKAFRPLQHEACKAAASKQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQ 271
           +FG   +R  Q E   A  + +D  ++M  GGGKSLCYQLPA ++ G T+V+SPLLSLIQ
Sbjct: 84  VFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQLPAMLRGGTTLVVSPLLSLIQ 143

Query: 272 DQIVTLNLKFGIPSTFLNSQQTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEIL 331
           DQ++ L    GI +  L S         V + L + +   K+LYVTPE+++ ++ F+  L
Sbjct: 144 DQVMGL-AALGISAYMLTSTSGKENEKFVYKALEKGEDDLKILYVTPEKVSKSKRFMSKL 203

Query: 332 RFMHMKKQLAGFVVDEAHCVSQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVRED 391
              H   +L+   +DEAHC SQWGHDFRPDY+NL  LK  FP VP++ALTATAT  V+ D
Sbjct: 204 EKCHNAGRLSLISIDEAHCCSQWGHDFRPDYKNLSILKTQFPKVPMVALTATATQKVQND 263

Query: 392 VLKALRIPHALILERSFDRPNLKYEVVCKT---KEPLVQLGQFIKERFKN-QCGIVYCLS 451
           +++ L IP  +    S +RPNL Y V  K+   K  + ++ +FI+E + N + GIVYC S
Sbjct: 264 LIEMLHIPKCVKFVSSVNRPNLFYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFS 323

Query: 452 KSECVEVSETLNKKFKIKAAYYHAGLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPD 511
           + EC +++  L ++  I A YYHA + A  R  V  +W    +Q++  T+AFGMGI+KPD
Sbjct: 324 RKECEQIAGDLRER-GISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGINKPD 383

Query: 512 VRFVIHNTMSKSIESYYQESGRAGRDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFK 571
           VRFVIH+++SKS+E+YYQESGRAGRDG P+ CI+ ++  D  R   M+     F   S  
Sbjct: 384 VRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMV-----FYEYSGL 443

Query: 572 MSMSQGKKMQQFCELKDECRRQMLLQHFGESFDRKACKYGSNPCDNCLKKS 618
            ++     + ++C+ K +CRR    +HFGE    + C   +  CDNC   S
Sbjct: 444 QNLYD---IVRYCQSKTKCRRSAFFRHFGE--PSQDC---NGMCDNCALSS 479

[Close]
BLAST of CSPI02G04540 vs. NCBI nr
Match: gi|778666998|ref|XP_011648853.1| (PREDICTED: ATP-dependent DNA helicase Q-like 1 [Cucumis sativus])

HSP 1 Score: 1223.8 bits (3165), Expect = 0.0e+00
Identity = 616/618 (99.68%), Postives = 617/618 (99.84%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA
Sbjct: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP
Sbjct: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180
           NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE
Sbjct: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180

Query: 181 RQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240
           RQYSRTSEAG KTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP
Sbjct: 181 RQYSRTSEAGPKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240

Query: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300
           TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV
Sbjct: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300

Query: 301 LQELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360
           LQELR+DKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD
Sbjct: 301 LQELRKDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360

Query: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420
           YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT
Sbjct: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420

Query: 421 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV 480
           KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV
Sbjct: 421 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV 480

Query: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540
           QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV
Sbjct: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540

Query: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600
           LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR
Sbjct: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600

Query: 601 KACKYGSNPCDNCLKKSS 619
           KACKYGSNPCDNCLKKSS
Sbjct: 601 KACKYGSNPCDNCLKKSS 618

[Close]
BLAST of CSPI02G04540 vs. NCBI nr
Match: gi|659070176|ref|XP_008453778.1| (PREDICTED: ATP-dependent DNA helicase Q-like 1 [Cucumis melo])

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 599/618 (96.93%), Postives = 612/618 (99.03%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           MGGHDL+LERARLLSLAAELGFDE+SA+ACLDRIINLYGDDG+EFVSVEHCGDDFLAALA
Sbjct: 1   MGGHDLDLERARLLSLAAELGFDEESAEACLDRIINLYGDDGREFVSVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           ESAPDNEEWDDLQAMESEACGALD+ILDESVQEKDG QNVHNRECPINIIEDSSE EENP
Sbjct: 61  ESAPDNEEWDDLQAMESEACGALDMILDESVQEKDGVQNVHNRECPINIIEDSSEAEENP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180
           NLVN+DSSS+SDED +FNASKKRNLDS+TSYCSDQATSILTSRASKNSTTRGS+YSSPGE
Sbjct: 121 NLVNLDSSSDSDEDVDFNASKKRNLDSTTSYCSDQATSILTSRASKNSTTRGSIYSSPGE 180

Query: 181 RQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240
           RQYSRTS AGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP
Sbjct: 181 RQYSRTSGAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240

Query: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300
           TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQI+TLNLKFGIPSTFLNSQQTSSQAAVV
Sbjct: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIITLNLKFGIPSTFLNSQQTSSQAAVV 300

Query: 301 LQELRQDKPSCKLLYVTPERIATQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360
           LQELR+DKPSCKLLYVTPERIAT SFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD
Sbjct: 301 LQELRKDKPSCKLLYVTPERIATHSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRPD 360

Query: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420
           YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT
Sbjct: 361 YRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCKT 420

Query: 421 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVLV 480
           KEPLVQLGQFI ERFKNQCGIVYCLSKSECVEVSE+LNKKFKIKAAYYHAGLAARQRVLV
Sbjct: 421 KEPLVQLGQFILERFKNQCGIVYCLSKSECVEVSESLNKKFKIKAAYYHAGLAARQRVLV 480

Query: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540
           QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV
Sbjct: 481 QKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCIV 540

Query: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600
           LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR
Sbjct: 541 LYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFDR 600

Query: 601 KACKYGSNPCDNCLKKSS 619
           KACKYGSNPCDNCLKKSS
Sbjct: 601 KACKYGSNPCDNCLKKSS 618

[Close]
BLAST of CSPI02G04540 vs. NCBI nr
Match: gi|590644566|ref|XP_007031117.1| (RECQ helicase l1 [Theobroma cacao])

HSP 1 Score: 889.8 bits (2298), Expect = 2.7e-255
Identity = 447/619 (72.21%), Postives = 521/619 (84.17%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M GHD ELE+ARLLSLA E GFDEQSA+  LDR+I+LYGDDG++F++VEHCGDDFLAALA
Sbjct: 1   MNGHDFELEKARLLSLALEFGFDEQSAKKSLDRLISLYGDDGRDFITVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDD-LQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEEN 120
           E+  D+E+WDD LQA+ESEACGAL+ + D++        +  N    INII+DS E ++ 
Sbjct: 61  ETMQDSEDWDDDLQAVESEACGALNNMFDKNALCNGKIDSNRNERIYINIIDDSPERKKQ 120

Query: 121 PNLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPG 180
            N + +DSSS+ DE  +   SKK+   S+ S   DQ++ +     SK S T+GSV S  G
Sbjct: 121 TNFMELDSSSD-DEVLDLRISKKKGDSSTLSSRLDQSSCV----GSKTSVTQGSVSSISG 180

Query: 181 ERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILM 240
           ++ +S TS  G  TL+YEELQ LDDFELANVVIFGN++FRPLQH+ACK++  KQDCFILM
Sbjct: 181 KKHFSTTSMGGHGTLSYEELQALDDFELANVVIFGNRSFRPLQHQACKSSLVKQDCFILM 240

Query: 241 PTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAV 300
           PTGGGKSLCYQLPAT++PGVTVVISPLLSLIQDQI+TLNLKFGIP+TFLNSQQ++SQAA 
Sbjct: 241 PTGGGKSLCYQLPATLKPGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQQSASQAAA 300

Query: 301 VLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFR 360
           VLQELR+D PSCKLLYVTPER+   QSFLE+L+ +H K QLAGFVVDEAHCVSQWGHDFR
Sbjct: 301 VLQELRKDNPSCKLLYVTPERVVGNQSFLEVLKCLHRKGQLAGFVVDEAHCVSQWGHDFR 360

Query: 361 PDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVC 420
           PDYR LGCLKQ+FP+VPVMALTATATHSVRED+L ALRIPHAL+L+ SFDRPNLKYEV+ 
Sbjct: 361 PDYRGLGCLKQHFPNVPVMALTATATHSVREDILNALRIPHALVLKTSFDRPNLKYEVIG 420

Query: 421 KTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRV 480
           K K+ L QLGQ +++RFKNQCGIVYCLSK+EC EVS  LN+K KI+  YYHAGLAARQRV
Sbjct: 421 KAKDSLKQLGQLLQDRFKNQCGIVYCLSKNECAEVSNFLNEKCKIRTVYYHAGLAARQRV 480

Query: 481 LVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASC 540
            VQKKW+ G++QIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRD  PA C
Sbjct: 481 TVQKKWYEGEVQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNCPAVC 540

Query: 541 IVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESF 600
           I LYQKKDFSRVVCMLRN QG KS+SFK +M+Q +KMQQ+CELKDECRRQMLL+HFGESF
Sbjct: 541 IALYQKKDFSRVVCMLRNGQGSKSKSFKTAMAQAQKMQQYCELKDECRRQMLLEHFGESF 600

Query: 601 DRKACKYGSNPCDNCLKKS 618
           DRK CK+GSNPCDNCL+ S
Sbjct: 601 DRKDCKHGSNPCDNCLRTS 614

[Close]
BLAST of CSPI02G04540 vs. NCBI nr
Match: gi|568836288|ref|XP_006472177.1| (PREDICTED: ATP-dependent DNA helicase Q-like 1 [Citrus sinensis])

HSP 1 Score: 872.1 bits (2252), Expect = 5.9e-250
Identity = 440/627 (70.18%), Postives = 515/627 (82.14%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M  HD E E+ARLLSLA E GFD++SA   L+R+I+LYGDDG++F+SVEHCGDDF+A LA
Sbjct: 1   MDCHDFEFEKARLLSLALEFGFDQESANKSLNRLISLYGDDGQDFISVEHCGDDFIATLA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           E+  D+EEWDDLQAMESEACGAL+ + D+ V + + A +  N    I+I++DS E +  P
Sbjct: 61  ETMQDSEEWDDLQAMESEACGALNNMFDKRVIDNNQANDNDNSRKYIDILDDSPEPKRRP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNST---------TR 180
            L+ +DS S++ ED +F   K+++   + S C D  + I T  + K+S+         + 
Sbjct: 121 TLMELDSLSDT-EDLDFTIPKQKDAILNLSSCPDGRSQIFTPSSVKHSSKSVDCKSGVST 180

Query: 181 GSVYSSPGERQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAAS 240
            S  S   +++ S  S+    TL++EELQ LDD E ANVVIFGN+AFRPLQH+ACKA+ +
Sbjct: 181 SSASSVSNKKRSSLISDNEHGTLSFEELQALDDMEFANVVIFGNRAFRPLQHQACKASVA 240

Query: 241 KQDCFILMPTGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQ 300
           KQDCF+L+PTGGGKSLCYQLPAT++ GVTVVISPLLSLIQDQI+TLNLKFGIP+TFLNSQ
Sbjct: 241 KQDCFVLLPTGGGKSLCYQLPATLKSGVTVVISPLLSLIQDQIITLNLKFGIPATFLNSQ 300

Query: 301 QTSSQAAVVLQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCV 360
           QT SQAA VLQELRQDKPSCKLLYVTPERI   QSF E+L+ +H K+QLAGFVVDEAHCV
Sbjct: 301 QTVSQAAAVLQELRQDKPSCKLLYVTPERIVGNQSFSEVLKCLHRKRQLAGFVVDEAHCV 360

Query: 361 SQWGHDFRPDYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRP 420
           SQWGHDFRPDYR LG LKQNFPDVPVMALTATAT SVR D+LKALRIPHAL+LE SFDRP
Sbjct: 361 SQWGHDFRPDYRGLGLLKQNFPDVPVMALTATATQSVRLDILKALRIPHALVLETSFDRP 420

Query: 421 NLKYEVVCKTKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHA 480
           NLKYEV+ K+KE L Q+GQ IK+RFK+QCGI+YCLSK+ECVEVS  LN+K KIK  YYHA
Sbjct: 421 NLKYEVIGKSKEALKQIGQLIKDRFKDQCGIIYCLSKNECVEVSNFLNQKCKIKTVYYHA 480

Query: 481 GLAARQRVLVQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAG 540
           GLAARQRV+VQKKWH GD+QIVCATIAFGMGIDKPDVRFVIHNT+SKSIESYYQESGRAG
Sbjct: 481 GLAARQRVVVQKKWHTGDVQIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAG 540

Query: 541 RDGYPASCIVLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQML 600
           RD  P+ CIVLYQKKDFSRVVCMLRN QGFKSE+FK +M+Q KKMQQ+CE K ECRRQ L
Sbjct: 541 RDNLPSVCIVLYQKKDFSRVVCMLRNGQGFKSEAFKTAMAQAKKMQQYCEQKAECRRQTL 600

Query: 601 LQHFGESFDRKACKYGSNPCDNCLKKS 618
           L+HFGESFDRKACK GSNPCDNCLK S
Sbjct: 601 LEHFGESFDRKACKNGSNPCDNCLKTS 626

[Close]
BLAST of CSPI02G04540 vs. NCBI nr
Match: gi|645221662|ref|XP_008245825.1| (PREDICTED: ATP-dependent DNA helicase Q-like 1 [Prunus mume])

HSP 1 Score: 867.8 bits (2241), Expect = 1.1e-248
Identity = 438/618 (70.87%), Postives = 505/618 (81.72%), Query Frame = 1 

Query: 1   MGGHDLELERARLLSLAAELGFDEQSAQACLDRIINLYGDDGKEFVSVEHCGDDFLAALA 60
           M GHDLE+E+ARLLSLA   GFDE+SA+ CLDR+++LYGDDG +F++VEHCGDDFLAALA
Sbjct: 1   MEGHDLEMEKARLLSLALNSGFDEESAKKCLDRLVDLYGDDGLDFITVEHCGDDFLAALA 60

Query: 61  ESAPDNEEWDDLQAMESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP 120
           ES  D EEWDD+QAME+EACG L+ + D+ +   +   +   +   IN++EDS E ++ P
Sbjct: 61  ESMQDTEEWDDIQAMETEACGVLNNMFDKDILNGNEPDDDRGK---INVVEDSPERQKYP 120

Query: 121 NLVNIDSSSESDEDANFNASKKRNLDSSTSYCSDQATSILTSRASKNSTTRGSVYSSPGE 180
           N + +DSS   + D                      T+ +T    ++S TR SV S   +
Sbjct: 121 NFLLLDSSDSEELDL---------------------TTPMTKDDCESSITRDSVPSISSK 180

Query: 181 RQYSRTSEAGRKTLTYEELQTLDDFELANVVIFGNKAFRPLQHEACKAAASKQDCFILMP 240
           +Q +RTS+   KTLTYEELQ LDD ELANVVIFGNK FRPLQH+ACKAA  K+DCFILMP
Sbjct: 181 KQCTRTSKYESKTLTYEELQALDDAELANVVIFGNKIFRPLQHQACKAAMEKRDCFILMP 240

Query: 241 TGGGKSLCYQLPATVQPGVTVVISPLLSLIQDQIVTLNLKFGIPSTFLNSQQTSSQAAVV 300
           TGGGKSLCYQLPAT++ GVTVV+SPLLSLIQDQI+TLNLKFG+P+TFLNSQQT+SQAA V
Sbjct: 241 TGGGKSLCYQLPATLKQGVTVVVSPLLSLIQDQIITLNLKFGVPATFLNSQQTTSQAAAV 300

Query: 301 LQELRQDKPSCKLLYVTPERIA-TQSFLEILRFMHMKKQLAGFVVDEAHCVSQWGHDFRP 360
           LQELRQDKPSCKLLYVTPERIA   SFLE+L+ +H K QLAGFVVDEAHCVSQWGHDFRP
Sbjct: 301 LQELRQDKPSCKLLYVTPERIAGNPSFLEVLKCLHSKGQLAGFVVDEAHCVSQWGHDFRP 360

Query: 361 DYRNLGCLKQNFPDVPVMALTATATHSVREDVLKALRIPHALILERSFDRPNLKYEVVCK 420
           DYR LGCLKQ F DVPVMALTATATHSVRED+LKALRIP AL+LERSFDRPNLKYEV+ K
Sbjct: 361 DYRGLGCLKQIFRDVPVMALTATATHSVREDILKALRIPRALVLERSFDRPNLKYEVIGK 420

Query: 421 TKEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETLNKKFKIKAAYYHAGLAARQRVL 480
           TKE L QLGQ +  RF++Q GI+YCLSKSECVEVS  LN+KFKIK AYYHAG+AARQRV 
Sbjct: 421 TKESLKQLGQLLMSRFQDQSGIIYCLSKSECVEVSNFLNEKFKIKTAYYHAGIAARQRVA 480

Query: 481 VQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCI 540
           VQKKW+ G +QIVCATIAFGMGIDKPDVRFVIHNT+SKSIESYYQESGRAGRD  PA CI
Sbjct: 481 VQKKWYTGGVQIVCATIAFGMGIDKPDVRFVIHNTISKSIESYYQESGRAGRDDLPAVCI 540

Query: 541 VLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFD 600
           VLYQKKDFSRVVC+LRN QG KS+SFK +M+Q +KMQ++CELK +CRRQMLL+HFGESFD
Sbjct: 541 VLYQKKDFSRVVCLLRNGQGCKSQSFKTAMAQAQKMQEYCELKTQCRRQMLLKHFGESFD 594

Query: 601 RKACKYGSNPCDNCLKKS 618
             ACK GSNPCDNCLK S
Sbjct: 601 ENACKCGSNPCDNCLKAS 594

The following BLAST results are available for this feature:
BLAST of CSPI02G04540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RQL1_ARATH1.4e-22263.65ATP-dependent DNA helicase Q-like 1 OS=Arabidopsis thaliana GN=RECQL1 PE=2 SV=1[more]
RQL4A_ARATH1.4e-11046.25ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=... [more]
RQL4B_ARATH7.2e-10740.76ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=... [more]
BLM_XENLA9.1e-10248.18Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1[more]
BLM_MOUSE7.2e-9948.77Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1[more]
BLAST of CSPI02G04540 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LLZ4_CUCSA0.0e+0099.68Uncharacterized protein OS=Cucumis sativus GN=Csa_2G033360 PE=4 SV=1[more]
A0A061FAW8_THECC1.9e-25572.21RECQ helicase l1 OS=Theobroma cacao GN=TCM_026744 PE=4 SV=1[more]
V4V4B8_9ROSI1.3e-24869.86Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000586mg PE=4 SV=1[more]
M5W242_PRUPE5.5e-24770.55Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015447mg PE=4 SV=1[more]
A9PK87_9ROSI9.4e-24770.27Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
BLAST of CSPI02G04540 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G05740.17.7e-22463.65 RECQ helicase l1[more]
AT1G10930.17.9e-11246.25 DNA helicase (RECQl4A)[more]
AT1G60930.14.1e-10840.76 RECQ helicase L4B[more]
AT4G35740.16.3e-9344.91 DEAD/DEAH box RNA helicase family protein [more]
AT1G31360.11.0e-8742.58 RECQ helicase L2[more]
BLAST of CSPI02G04540 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778666998|ref|XP_011648853.1|0.0e+0099.68PREDICTED: ATP-dependent DNA helicase Q-like 1 [Cucumis sativus][more]
gi|659070176|ref|XP_008453778.1|0.0e+0096.93PREDICTED: ATP-dependent DNA helicase Q-like 1 [Cucumis melo][more]
gi|590644566|ref|XP_007031117.1|2.7e-25572.21RECQ helicase l1 [Theobroma cacao][more]
gi|568836288|ref|XP_006472177.1|5.9e-25070.18PREDICTED: ATP-dependent DNA helicase Q-like 1 [Citrus sinensis][more]
gi|645221662|ref|XP_008245825.1|1.1e-24870.87PREDICTED: ATP-dependent DNA helicase Q-like 1 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR002464DNA/RNA_helicase_DEAH_CS
IPR004589DNA_helicase_ATP-dep_RecQ
IPR011545DEAD/DEAH_box_helicase_dom
IPR011991Winged helix-turn-helix DNA-binding domain
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0008026ATP-dependent helicase activity
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006261 DNA-dependent DNA replication
biological_process GO:0006310 DNA recombination
biological_process GO:0070417 cellular response to cold
biological_process GO:0042631 cellular response to water deprivation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G04540.1CSPI02G04540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 427..533
score: 8.2
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 451..533
score: 5.8
IPR001650Helicase, C-terminalPROFILEPS51194HELICASE_CTERcoord: 423..581
score: 19
IPR002464DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved sitePROSITEPS00690DEAH_ATP_HELICASEcoord: 340..349
scor
IPR004589DNA helicase, ATP-dependent, RecQ typeTIGRFAMsTIGR00614TIGR00614coord: 212..616
score: 1.6E
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 220..387
score: 3.7
IPR011991Winged helix-turn-helix DNA-binding domainGENE3DG3DSA:1.10.10.10coord: 548..616
score: 3.0
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 214..417
score: 7.2
IPR014001Helicase superfamily 1/2, ATP-binding domainPROFILEPS51192HELICASE_ATP_BIND_1coord: 226..401
score: 20
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 212..405
score: 8.1E-48coord: 406..547
score: 1.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 257..553
score: 3.24
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 31..150
score: 5.6E-222coord: 184..618
score: 5.6E
NoneNo IPR availablePANTHERPTHR13710:SF70BLOOM SYNDROME PROTEINcoord: 184..618
score: 5.6E-222coord: 31..150
score: 5.6E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G04540Cla019953Watermelon (97103) v1cpiwmB149
CSPI02G04540Csa2G033360Cucumber (Chinese Long) v2cpicuB065
CSPI02G04540MELO3C004201Melon (DHL92) v3.5.1cpimeB139
CSPI02G04540ClCG02G015120Watermelon (Charleston Gray)cpiwcgB128
CSPI02G04540Lsi11G006160Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G04540MELO3C004201.2Melon (DHL92) v3.6.1cpimedB132
CSPI02G04540CsaV3_2G006900Cucumber (Chinese Long) v3cpicucB080
CSPI02G04540Cla97C02G040900Watermelon (97103) v2cpiwmbB120
CSPI02G04540Bhi06G001315Wax gourdcpiwgoB129
CSPI02G04540Cucsa.090840Cucumber (Gy14) v1cgycpiB097
CSPI02G04540CmaCh05G010830Cucurbita maxima (Rimu)cmacpiB800
CSPI02G04540CmoCh05G010980Cucurbita moschata (Rifu)cmocpiB787
CSPI02G04540Cp4.1LG11g08920Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G04540CsGy2G004670Cucumber (Gy14) v2cgybcpiB056
CSPI02G04540Carg12012Silver-seed gourdcarcpiB0596
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G04540Cucurbita pepo (Zucchini)cpecpiB821
CSPI02G04540Bottle gourd (USVL1VR-Ls)cpilsiB087
CSPI02G04540Bottle gourd (USVL1VR-Ls)cpilsiB134
CSPI02G04540Melon (DHL92) v3.6.1cpimedB109
CSPI02G04540Silver-seed gourdcarcpiB0073
CSPI02G04540Silver-seed gourdcarcpiB0916
CSPI02G04540Cucumber (Chinese Long) v3cpicucB078
CSPI02G04540Watermelon (97103) v2cpiwmbB154
CSPI02G04540Cucurbita maxima (Rimu)cmacpiB174
CSPI02G04540Cucurbita maxima (Rimu)cmacpiB357
CSPI02G04540Cucurbita maxima (Rimu)cmacpiB900
CSPI02G04540Cucurbita moschata (Rifu)cmocpiB159
CSPI02G04540Cucurbita moschata (Rifu)cmocpiB349
CSPI02G04540Cucumber (Chinese Long) v2cpicuB063
CSPI02G04540Melon (DHL92) v3.5.1cpimeB113
CSPI02G04540Watermelon (Charleston Gray)cpiwcgB161
CSPI02G04540Watermelon (97103) v1cpiwmB120
CSPI02G04540Watermelon (97103) v1cpiwmB180