CSPI02G03450 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI02G03450
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr2 : 2420164 .. 2420370 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCGGGTGAAGGGACTTGGCTCACGAAGAGGAGAGATGCATGACTCGGACAGTGATGAAGTTGCACGTACGAGAAGAGTGGCTGGAAGGGAAAGGCTTGTCTCAACCGGCTCACTTGAGGTGGATGGAAAAGGAGACGACGGAAATGCAAAGATCGAACAACTTATCGATTTGTTTGACGCGATAGAGGACTTGACAACGTAG

mRNA sequence

ATGGCTCGGGTGAAGGGACTTGGCTCACGAAGAGGAGAGATGCATGACTCGGACAGTGATGAAGTTGCACGTACGAGAAGAGTGGCTGGAAGGGAAAGGCTTGTCTCAACCGGCTCACTTGAGGTGGATGGAAAAGGAGACGACGGAAATGCAAAGATCGAACAACTTATCGATTTGTTTGACGCGATAGAGGACTTGACAACGTAG

Coding sequence (CDS)

ATGGCTCGGGTGAAGGGACTTGGCTCACGAAGAGGAGAGATGCATGACTCGGACAGTGATGAAGTTGCACGTACGAGAAGAGTGGCTGGAAGGGAAAGGCTTGTCTCAACCGGCTCACTTGAGGTGGATGGAAAAGGAGACGACGGAAATGCAAAGATCGAACAACTTATCGATTTGTTTGACGCGATAGAGGACTTGACAACGTAG
Homology
[Close]
BLAST of CSPI02G03450 vs. TrEMBL
Match: A0A0A0LII0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G014330 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.1e-26
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MARVKGLGSRRGEMHDSDSDEVARTRRVAGRERLVSTGSLEVDGKGDDGNAKIEQLIDLF 60
          MARVKGLGSRRGEMHDS++DEVARTRRVAGRERLVSTGSLE DG+GDD NAKIEQLIDLF
Sbjct: 1  MARVKGLGSRRGEMHDSNNDEVARTRRVAGRERLVSTGSLEADGEGDDENAKIEQLIDLF 60

Query: 61 DAIEDLTT 69
          DAIEDLTT
Sbjct: 61 DAIEDLTT 68

[Close]
BLAST of CSPI02G03450 vs. NCBI nr
Match: gi|700205735|gb|KGN60854.1| (hypothetical protein Csa_2G014330 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 5.9e-26
Identity = 63/68 (92.65%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MARVKGLGSRRGEMHDSDSDEVARTRRVAGRERLVSTGSLEVDGKGDDGNAKIEQLIDLF 60
          MARVKGLGSRRGEMHDS++DEVARTRRVAGRERLVSTGSLE DG+GDD NAKIEQLIDLF
Sbjct: 1  MARVKGLGSRRGEMHDSNNDEVARTRRVAGRERLVSTGSLEADGEGDDENAKIEQLIDLF 60

Query: 61 DAIEDLTT 69
          DAIEDLTT
Sbjct: 61 DAIEDLTT 68

The following BLAST results are available for this feature:
BLAST of CSPI02G03450 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI02G03450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LII0_CUCSA4.1e-2692.65Uncharacterized protein OS=Cucumis sativus GN=Csa_2G014330 PE=4 SV=1[more]
BLAST of CSPI02G03450 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI02G03450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700205735|gb|KGN60854.1|5.9e-2692.65hypothetical protein Csa_2G014330 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI02G03450.1CSPI02G03450.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI02G03450Csa2G014330Cucumber (Chinese Long) v2cpicuB065
CSPI02G03450CsaV3_2G004740Cucumber (Chinese Long) v3cpicucB080
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI02G03450Watermelon (97103) v2cpiwmbB120
CSPI02G03450Wax gourdcpiwgoB137
CSPI02G03450Cucumber (Gy14) v1cgycpiB097
CSPI02G03450Cucurbita maxima (Rimu)cmacpiB174
CSPI02G03450Cucurbita maxima (Rimu)cmacpiB800
CSPI02G03450Cucurbita moschata (Rifu)cmocpiB159
CSPI02G03450Cucurbita moschata (Rifu)cmocpiB787
CSPI02G03450Melon (DHL92) v3.5.1cpimeB139
CSPI02G03450Watermelon (Charleston Gray)cpiwcgB128
CSPI02G03450Watermelon (97103) v1cpiwmB149
CSPI02G03450Cucurbita pepo (Zucchini)cpecpiB100
CSPI02G03450Cucurbita pepo (Zucchini)cpecpiB821
CSPI02G03450Bottle gourd (USVL1VR-Ls)cpilsiB096
CSPI02G03450Melon (DHL92) v3.6.1cpimedB132
CSPI02G03450Cucumber (Gy14) v2cgybcpiB056
CSPI02G03450Silver-seed gourdcarcpiB0330
CSPI02G03450Silver-seed gourdcarcpiB0751