CSPI02G01050 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGGACTTTTATTTTATTCTATTTTGGGGCAAAAGAAAAGAGGAGACATCCTTTTACACCGTAGAAGATCGAGAAGAATCAAAGAGGACAAAGTCGTGACTCGTGAGTTGTAGAGTGGTACACTGCAGGATATCCTTAAAGCTTAATCGTCTAAATTAGGGTTATCAACAAACGGATTCATCAAGATTCTCTCCACCCAACCATGAAGCTCAAGCAATTAGAGTCCTTACTTGGTGAAATTCAACAGTTCTCCAATCCTAAGGTTTTGATTTCCTCTTCCCTTTTTTCTTTTTCTTTTACACACTTGTTCAATCAACACTACATTTTTCCTGCAGATTCAGCTGGAGCAATACCCTACTGGGCCTCACATTGCTTCTCGCATGTTGTACACCGTATCTCTCTTCCCTCTTCTTTCCCTTTTGCTCTAATCTCTGTTTTTTCCCCATCTTCTATAGCTCATGATTAAGATCACTTCTGTCATGTTTATAAGTACGTATTTTATTACTTCAAATCGATTCATTAAATAGTTTTACGTTTTTAGACGCATTTCCATACTGTTAACGTAGATTTTTGAGTTATTAAAAGTTGTATATAATGGTGATTTTAACTATTTTAGAATCCCTTCGTATATGAGTTGCCATGGAACCCGATATATGGAATATGGGAAATTTGATTTATTTAAGTGATTTAGTGCTTGCTCTCACCTGTGGGTTTGAAAATTCGTAGAAGACCCACCTAGTAGAAATTAATAATAACTGACATTATTTGTTTGAACGTGGAACTTTCTTCTTTGATATCATATTAATTTACTATTGAACCTAAAAATAAGCTCAAGGGAACGGTTGATTTGACCATCGATAGTGTGCTGAGTGGTTCATTTACTTGGTTATTTGATTGAAAATCAAGTTGTTTACTCAAGAATGGATTGTTTGTTTTTGCTAAATAGTATCTTTTAAGTTTTATCATTACATACGAATCATATGGTGATTCATTACTATAACAATTGTAAAGTTGAAATTTATACCTGTCTGCAGATTTCAGATATCAAGGCTTTTCTAGTTTTCTTTTACTATTAGTATTTAACTTCTCAGCCAACACCATGAGTTGGAGTGTGGCCTAAAATATCTATTACTTGAAGGAAAATTGCATCAAATGACAAAAACATTTAGAAAAAAACAATTCATGACACCAATTTTTTGCATATTGCGAATATGAAAAAATTAGTAATATTAGACGACTATTAGGCGGTAATCATAGGGCTATCGGAGAGTTATCAGACGGTAATCATAAGATTATTAAAATGTCATCACTTTTAAATTTGCTACTTTTGCAAATTTAGAAAATGTTGTATTAAAGCCTCTTACCTTAATCCCTATTTGGATAATTGATAAGGAGCTTCCCTTTCATCGTTTTCTTACCGGATCTATAGTCAATATGTTTGTATCTTGGTGTAAATGCACCCTCTCTTCCATTACCCGTAGCCTCTCCTCCCTACACTCCGAATGGAGAGTTTCTTGTAGTTAAGAAAAAGTTGATAGTTTTTGTATCTAATTATATGAAGCATGGTTGTATAGAGAATGACTTGTTTTGAACTATAGATGTCTTTCATAACCAACTATAGCAATGAATATAATCAATTATGTACTTTTAATCACAGTCCCAGAAAAGCGATGGAGCTTTGTCTGGCATACATTTCTTTGTTTGTTACATATTTGATTTATGTAATCATAGCTTATAACATGGGTCATTCGTCTGAAACTTTATCAGGCAGAGAATTCTTTTGGAGATGTTAGTGGCAAGGTAGTGGCTGATTTGGGTTGTGGTTGTGGTACATTGGGAGCTGCAGCCGCAATATTGGGTGCAGAGTAAGTAGCATTTTCCCTCTGTTCCTCTCTATTTTCTTTTGGTTTATTACTCTTTTAGTTTTGGTTGCAAATTCTGACTATAAGGGAAGTGGATAAAATGTTGTTATTCAGCATATATTTTATTTTAATCATACCAATGCTTCAAATCTTTACAATTCTTGGACAGACACGTTACTGGAATAGACATCGATCCCGATTCTCTTGAAATAGCATCTTCAAATGCAGAGTATCTTGAGGTTCTACTATCTTTTGACTTTATGTATGATTGTCATGTGTTGGATTGGGATACTTTGGATTTTCTTCGTTACACCTGTTTTTTTGAGTTGATCTATTGAAAATTGCAGTTCGAAATGGACTTGGTTCTATGTGATGTGAAGAACTTGGGATGGAGAGGTAACACACGAAAACACCATACTTGCTATGTTTAAATGCTTTTCACTCCCATTGTGCACCTGCTTACTTGTAGACATGTTGCTCTAGTTTTTGAGAAAAGTATGTATAGAAGAAAATTGTATATCACTTTGTAATAATTCATCAACACGTTGTTTTTCACCGAATCTTGGAGAACTAGGGATCTGTGTGAAGGTTTGTCTTACTTTGATGAAATTGGGCGGTATTGTTATTTTATGCTCAAGAAATCTAATGGCTATTGGTGCCTCCTGTATTCTTCAATTCTCTTTGAATGAACTTTTTGTTTATTGTTTGATTCACTTCATGATATTATTGTTTGTTCACAACCTTTTTAGTAATTGGTTTGTATTATTTGTATCAAAAGAACTTATGGATTCATGATATTGCACGGGACATTATCACCTATAGATGCTTATGTCTTTATTTGGATGATGATAAAAAAAGTGTTCAAATTCAGTTTTCATCAGTTTCCTTGGGCACTATTTTCTTTGATCCAACCTTTTGCCTAGACGAGATATCTTTGATCTTATTTTTCCGTATCTACATAAAAAACATCCTGCATATGGCCAGGTCAGGTTGTTGATACAATTGTAATGAATCCTCCATTTGGAACACGAAGAAAAGGTGCAGATATGGAGTTCCTTTCTGCAGCTTTAAAGGTCATTATAGTTCTACATCTGACTGAGATGCTCAAGTACATATGTAAAATATTTATCATTTACTCTTATTCTTTGAAATTTCTTTTCAGCATGCGTCCAAAGCTGTTTATTCTTTGCACAAGACCTCAACAAGAGATGTAAGTTCACATGTTCAAACTCAATGCAATTAGAACTCTGCAGGGTCACTAGGTGTAGGTTTGCATTATCTTGTCCGTCCGGTCCATTCAATGGTTACTAAATGTAATGAAATGAATACAGTGGAAGACTATCGACTATTCTTTTAACCCTGAAAAGCGTGCACCTCACTTTATGTAATATTTCCATTTTCCCAATTGGAGCATTCCTCCCTATTTTCATTTTACTACTTTTTAGGAATTGGATAGGAAATACAAACTTCTTCTAAGATTGTCAGATACCTTAGTTTTGATACCGTCTTTTCCCTTGAACCAACATTTTCTTGTCCCCATACAAGAGTATATTATAGGAATGCTATTAAAGGTATATTAGTTATTAGCCACAAAAGTTGTTAGGTTCTTTGTTATTAATAGAGGAACAGGGAAGGGAGTACTCAGACGACGTAGACGTTACTTGGGGAGTTTTATTATAATTTCGTTATCTTTTTTATTTCAATACATCTGAGTTCTATTTGAGGAGAAACACACCTGCGTTTGCCTTCTTCTAGCAATGTGGTGAATGCGTTTGCTTATTGGGATATTGTCTTTAGCCAATGCGAATATCTAAATTATTTGTGAGCAAGAGAAAATTTAATTTTGTTGAAATACAATCAAGTGCCGACCTCTATAATTCTCACAAGCCTTTATTTTATTGCAACAGCATATAAAACGGGCAGCCGTTCGAGATTATGGAGCCGAAAGTGCCGAGGTTTTGTGCGAGGTGGGCAACGGTTTGTTGGGTGATCTATACACGTTGATGTTCAAATTCTCATTGATGTTTATGCTATTCATGTTCTTATTATGATTCAATTCAACACAAATCATCCTCTAGTTCTAATCCACCCGTTTCTTTCTTTTCTTTGTTTTCTCATCTCTTAGCTTCGGTACGATGTGCCCCAACTTTACAAATTTCACAAGAGAAAAGAGGTCGACATTGCCGTGGACCTTTGGCGATTTGTACCAAGAAGTCACCGAGAAAATGATGTCTAGGAATGATCTGTATGAAGTTCGTGTCATGTCTCCAATGCACATAAAGTGATCACATCAAATTTCCGTTGGTGTGAGAGGCAGGATGAGAAGCATCAAACAGCTCATATGATCTTTTTCTGTTGAATGTTCATATATTTCTTGCTAAAAGAATTGTGGTACTTAGTTCTTAGGTCTTAGAATTCATTGGACAAGCCATTTTCGTTTGTTAAGTGCTTCCTGTCAACGGATATGGAATTTTCATTGTGAAACAGTAACCCTCGTGAAAATGAATTGTAATGGTTAGAAAAAAAAGAAAACGAAATTATACGAAGCCAA ATGAAGCTCAAGCAATTAGAGTCCTTACTTGGTGAAATTCAACAGTTCTCCAATCCTAAGATTCAGCTGGAGCAATACCCTACTGGGCCTCACATTGCTTCTCGCATGTTGTACACCGCAGAGAATTCTTTTGGAGATGTTAGTGGCAAGGTAGTGGCTGATTTGGGTTGTGGTTGTGGTACATTGGGAGCTGCAGCCGCAATATTGGGTGCAGAACACGTTACTGGAATAGACATCGATCCCGATTCTCTTGAAATAGCATCTTCAAATGCAGAGTATCTTGAGTTCGAAATGGACTTGGTTCTATGTGATGTGAAGAACTTGGGATGGAGAGGTCAGGTTGTTGATACAATTGTAATGAATCCTCCATTTGGAACACGAAGAAAAGGTGCAGATATGGAGTTCCTTTCTGCAGCTTTAAAGCATGCGTCCAAAGCTGTTTATTCTTTGCACAAGACCTCAACAAGAGATCATATAAAACGGGCAGCCGTTCGAGATTATGGAGCCGAAAGTGCCGAGGTTTTGTGCGAGCTTCGGTACGATGTGCCCCAACTTTACAAATTTCACAAGAGAAAAGAGGTCGACATTGCCGTGGACCTTTGGCGATTTGTACCAAGAAGTCACCGAGAAAATGATGTCTAG ATGAAGCTCAAGCAATTAGAGTCCTTACTTGGTGAAATTCAACAGTTCTCCAATCCTAAGATTCAGCTGGAGCAATACCCTACTGGGCCTCACATTGCTTCTCGCATGTTGTACACCGCAGAGAATTCTTTTGGAGATGTTAGTGGCAAGGTAGTGGCTGATTTGGGTTGTGGTTGTGGTACATTGGGAGCTGCAGCCGCAATATTGGGTGCAGAACACGTTACTGGAATAGACATCGATCCCGATTCTCTTGAAATAGCATCTTCAAATGCAGAGTATCTTGAGTTCGAAATGGACTTGGTTCTATGTGATGTGAAGAACTTGGGATGGAGAGGTCAGGTTGTTGATACAATTGTAATGAATCCTCCATTTGGAACACGAAGAAAAGGTGCAGATATGGAGTTCCTTTCTGCAGCTTTAAAGCATGCGTCCAAAGCTGTTTATTCTTTGCACAAGACCTCAACAAGAGATCATATAAAACGGGCAGCCGTTCGAGATTATGGAGCCGAAAGTGCCGAGGTTTTGTGCGAGCTTCGGTACGATGTGCCCCAACTTTACAAATTTCACAAGAGAAAAGAGGTCGACATTGCCGTGGACCTTTGGCGATTTGTACCAAGAAGTCACCGAGAAAATGATGTCTAG
BLAST of CSPI02G01050 vs. Swiss-Prot
Match: METL5_MOUSE (Methyltransferase-like protein 5 OS=Mus musculus GN=Mettl5 PE=2 SV=2) HSP 1 Score: 212.2 bits (539), Expect = 5.5e-54 Identity = 112/206 (54.37%), Postives = 140/206 (67.96%), Query Frame = 1
BLAST of CSPI02G01050 vs. Swiss-Prot
Match: METL5_HUMAN (Methyltransferase-like protein 5 OS=Homo sapiens GN=METTL5 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.3e-52 Identity = 110/206 (53.40%), Postives = 140/206 (67.96%), Query Frame = 1
BLAST of CSPI02G01050 vs. Swiss-Prot
Match: Y284_METJA (Uncharacterized protein MJ0284 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0284 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 6.7e-28 Identity = 75/211 (35.55%), Postives = 117/211 (55.45%), Query Frame = 1
BLAST of CSPI02G01050 vs. Swiss-Prot
Match: PRMA_MARHV (Ribosomal protein L11 methyltransferase OS=Marinobacter hydrocarbonoclasticus (strain ATCC 700491 / DSM 11845 / VT8) GN=prmA PE=3 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 7.7e-08 Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 1
BLAST of CSPI02G01050 vs. Swiss-Prot
Match: PRMA_VIBCB (Ribosomal protein L11 methyltransferase OS=Vibrio campbellii (strain ATCC BAA-1116 / BB120) GN=prmA PE=3 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07 Identity = 40/104 (38.46%), Postives = 52/104 (50.00%), Query Frame = 1
BLAST of CSPI02G01050 vs. TrEMBL
Match: A0A0A0LHX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G003070 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-117 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of CSPI02G01050 vs. TrEMBL
Match: D7TBJ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0016g03520 PE=4 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 2.9e-94 Identity = 167/209 (79.90%), Postives = 191/209 (91.39%), Query Frame = 1
BLAST of CSPI02G01050 vs. TrEMBL
Match: A0A067KC72_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07278 PE=4 SV=1) HSP 1 Score: 347.4 bits (890), Expect = 1.2e-92 Identity = 162/207 (78.26%), Postives = 189/207 (91.30%), Query Frame = 1
BLAST of CSPI02G01050 vs. TrEMBL
Match: A0A061GNL2_THECC (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein OS=Theobroma cacao GN=TCM_037835 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 6.0e-92 Identity = 164/213 (77.00%), Postives = 187/213 (87.79%), Query Frame = 1
BLAST of CSPI02G01050 vs. TrEMBL
Match: A0A0D2UAJ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G073700 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 1.3e-91 Identity = 164/212 (77.36%), Postives = 187/212 (88.21%), Query Frame = 1
BLAST of CSPI02G01050 vs. TAIR10
Match: AT4G28830.1 (AT4G28830.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 327.8 bits (839), Expect = 5.0e-90 Identity = 156/208 (75.00%), Postives = 183/208 (87.98%), Query Frame = 1
BLAST of CSPI02G01050 vs. NCBI nr
Match: gi|449443161|ref|XP_004139349.1| (PREDICTED: methyltransferase-like protein 5 [Cucumis sativus]) HSP 1 Score: 429.9 bits (1104), Expect = 2.7e-117 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of CSPI02G01050 vs. NCBI nr
Match: gi|659071177|ref|XP_008458526.1| (PREDICTED: methyltransferase-like protein 5 [Cucumis melo]) HSP 1 Score: 421.4 bits (1082), Expect = 9.5e-115 Identity = 208/213 (97.65%), Postives = 212/213 (99.53%), Query Frame = 1
BLAST of CSPI02G01050 vs. NCBI nr
Match: gi|1009160624|ref|XP_015898451.1| (PREDICTED: methyltransferase-like protein 5 [Ziziphus jujuba]) HSP 1 Score: 358.2 bits (918), Expect = 9.8e-96 Identity = 167/206 (81.07%), Postives = 194/206 (94.17%), Query Frame = 1
BLAST of CSPI02G01050 vs. NCBI nr
Match: gi|225445168|ref|XP_002284097.1| (PREDICTED: methyltransferase-like protein 5 [Vitis vinifera]) HSP 1 Score: 352.8 bits (904), Expect = 4.1e-94 Identity = 167/209 (79.90%), Postives = 191/209 (91.39%), Query Frame = 1
BLAST of CSPI02G01050 vs. NCBI nr
Match: gi|802627565|ref|XP_012076739.1| (PREDICTED: methyltransferase-like protein 5 isoform X2 [Jatropha curcas]) HSP 1 Score: 347.4 bits (890), Expect = 1.7e-92 Identity = 162/207 (78.26%), Postives = 189/207 (91.30%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |