CSPI01G34490 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G34490
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 29405753 .. 29405991 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGTATATCTTCAATGTATTTCTCATTTCGAGTTGTTGTCTAGGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT

mRNA sequence

ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT

Coding sequence (CDS)

ATGCACTCTAAGTTGAAGGCTCTCCATGTAGAATCTGATGCCCTTAAAGTGCTGATGCTATTCAACTTTGAAGTTGTTGATCTCATAGAAACCAACAACATTATTATTGTAGATGAAATATTGATATCTTTGCATACACAGGAAGGTGTTGGGCATAGTCTTGCTCGGATTTTTGCTGAGGTTGGGGATGAGCAGCTT
Homology
[Close]
BLAST of CSPI01G34490 vs. TrEMBL
Match: A0A0A0M179_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G702020 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-15
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 

Query: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 48
          MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ
Sbjct: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 47

[Close]
BLAST of CSPI01G34490 vs. NCBI nr
Match: gi|700211781|gb|KGN66877.1| (hypothetical protein Csa_1G702020 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 4.5e-15
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 1 

Query: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 48
          MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ
Sbjct: 1  MHSKLKALHVESDALKVLMLFNFEVVDLIETNNIIIVDEILISLHTQ 47

The following BLAST results are available for this feature:
BLAST of CSPI01G34490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G34490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M179_CUCSA3.1e-15100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G702020 PE=4 SV=1[more]
BLAST of CSPI01G34490 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G34490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211781|gb|KGN66877.1|4.5e-15100.00hypothetical protein Csa_1G702020 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G34490.1CSPI01G34490.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G34490Csa1G702020Cucumber (Chinese Long) v2cpicuB001
CSPI01G34490CsaV3_1G046350Cucumber (Chinese Long) v3cpicucB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G34490Watermelon (97103) v2cpiwmbB011
CSPI01G34490Wax gourdcpiwgoB031
CSPI01G34490Cucumber (Gy14) v1cgycpiB036
CSPI01G34490Cucurbita maxima (Rimu)cmacpiB209
CSPI01G34490Cucurbita maxima (Rimu)cmacpiB404
CSPI01G34490Cucurbita moschata (Rifu)cmocpiB196
CSPI01G34490Cucurbita moschata (Rifu)cmocpiB390
CSPI01G34490Melon (DHL92) v3.5.1cpimeB013
CSPI01G34490Watermelon (Charleston Gray)cpiwcgB026
CSPI01G34490Watermelon (97103) v1cpiwmB045
CSPI01G34490Watermelon (97103) v1cpiwmB053
CSPI01G34490Cucurbita pepo (Zucchini)cpecpiB019
CSPI01G34490Cucurbita pepo (Zucchini)cpecpiB520
CSPI01G34490Bottle gourd (USVL1VR-Ls)cpilsiB034
CSPI01G34490Melon (DHL92) v3.6.1cpimedB013
CSPI01G34490Melon (DHL92) v3.6.1cpimedB022
CSPI01G34490Cucumber (Gy14) v2cgybcpiB002
CSPI01G34490Silver-seed gourdcarcpiB0994