CSPI01G34110 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G34110
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 29037357 .. 29037855 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAATGGAAGAGATGAAGAGGGGGATGTTCAAGATGACTCGAAGTGTTGCAGAGCAGTGATTAAAGAACAATGGAAGAAGGTGGCGGAGGAATTTAGTATGGAAAAAGAAGCTGCCTTCATTAAAGTTTGTGGTGACGAGCAACAACGATTTAGCGTTAAATTTGGTGGCGTATACTGCGAATTTAATTCAAGATTCATTTCAGAACCATATGTTTTAGGATTTGGTTCCTCAATTTCAGTTTCATTTTTTGGTTCCATTTTAATTACTATTTTACATTCTATACATTTAAAGTAATTAACACAAGTTCAATCACTTATTAAATATTTTTTAAAAAAATTTAAACATCTAAACAACCACATTATTTTGAATTGCAGATTTGGTTTGGGAAGTTGATAGATTTTGATGAGTCGTCGTTGAAGATGAACAATTCACAGGACGACTTGGCTCTCTTCATGAGCTAATAGAACGAGCTTTGAGTGTTGATTCTCTGTGA

mRNA sequence

ATGGAAAATGGAAGAGATGAAGAGGGGGATGTTCAAGATGACTCGAAGTGTTGCAGAGCAGTGATTAAAGAACAATGGAAGAAGGTGGCGGAGGAATTTAGTATGGAAAAAGAAGCTGCCTTCATTAAAGTTTGTGGTGACGAGCAACAACGATTTAGCGTTAAATTTGGTGGCGTATACTGCGAATTTAATTCAAGATTCATTTCAGAACCATATGTTTTAGGATTTGTCGTCGTTGAAGATGAACAATTCACAGGACGACTTGGCTCTCTTCATGAGCTAATAGAACGAGCTTTGAGTGTTGATTCTCTGTGA

Coding sequence (CDS)

ATGGAAAATGGAAGAGATGAAGAGGGGGATGTTCAAGATGACTCGAAGTGTTGCAGAGCAGTGATTAAAGAACAATGGAAGAAGGTGGCGGAGGAATTTAGTATGGAAAAAGAAGCTGCCTTCATTAAAGTTTGTGGTGACGAGCAACAACGATTTAGCGTTAAATTTGGTGGCGTATACTGCGAATTTAATTCAAGATTCATTTCAGAACCATATGTTTTAGGATTTGTCGTCGTTGAAGATGAACAATTCACAGGACGACTTGGCTCTCTTCATGAGCTAATAGAACGAGCTTTGAGTGTTGATTCTCTGTGA
Homology
[Close]
BLAST of CSPI01G34110 vs. TrEMBL
Match: A0A0A0M136_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700640 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.3e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY 60
           MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY
Sbjct: 1   MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY 60

Query: 61  CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL 105
           CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL
Sbjct: 61  CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL 104

[Close]
BLAST of CSPI01G34110 vs. NCBI nr
Match: gi|700211741|gb|KGN66837.1| (hypothetical protein Csa_1G700640 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 3.3e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

Query: 1   MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY 60
           MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY
Sbjct: 1   MENGRDEEGDVQDDSKCCRAVIKEQWKKVAEEFSMEKEAAFIKVCGDEQQRFSVKFGGVY 60

Query: 61  CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL 105
           CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL
Sbjct: 61  CEFNSRFISEPYVLGFVVVEDEQFTGRLGSLHELIERALSVDSL 104

The following BLAST results are available for this feature:
BLAST of CSPI01G34110 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G34110 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M136_CUCSA2.3e-52100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G700640 PE=4 SV=1[more]
BLAST of CSPI01G34110 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G34110 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211741|gb|KGN66837.1|3.3e-52100.00hypothetical protein Csa_1G700640 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G34110.1CSPI01G34110.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G34110Csa1G700640Cucumber (Chinese Long) v2cpicuB001
CSPI01G34110CsaV3_1G046000Cucumber (Chinese Long) v3cpicucB000
CSPI01G34110CsGy1G032610Cucumber (Gy14) v2cgybcpiB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G34110Wax gourdcpiwgoB031
CSPI01G34110Cucumber (Gy14) v1cgycpiB496
CSPI01G34110Cucurbita maxima (Rimu)cmacpiB209
CSPI01G34110Cucurbita maxima (Rimu)cmacpiB404
CSPI01G34110Cucurbita moschata (Rifu)cmocpiB196
CSPI01G34110Cucurbita moschata (Rifu)cmocpiB390
CSPI01G34110Melon (DHL92) v3.5.1cpimeB013
CSPI01G34110Watermelon (Charleston Gray)cpiwcgB026
CSPI01G34110Watermelon (97103) v1cpiwmB045
CSPI01G34110Watermelon (97103) v1cpiwmB053
CSPI01G34110Cucurbita pepo (Zucchini)cpecpiB520
CSPI01G34110Cucurbita pepo (Zucchini)cpecpiB532
CSPI01G34110Bottle gourd (USVL1VR-Ls)cpilsiB034
CSPI01G34110Melon (DHL92) v3.6.1cpimedB013
CSPI01G34110Melon (DHL92) v3.6.1cpimedB022
CSPI01G34110Silver-seed gourdcarcpiB0126
CSPI01G34110Silver-seed gourdcarcpiB0256
CSPI01G34110Watermelon (97103) v2cpiwmbB011