CSPI01G33710 (gene) Wild cucumber (PI 183967)

NameCSPI01G33710
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionLeguminosin group486 secreted peptide
LocationChr1 : 28673002 .. 28673367 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG

mRNA sequence

ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG

Coding sequence (CDS)

ATGCTATATGCTGATGAAGAATTGATCTCAATTGGTCGACCTGAAACAACAGTGACCATTATTAATAAATTGGCTGGCCCACTGCTAGGCGTTCACTGTAGATCAAAGGACGATGACTTGGGAGCCCAGTTCCTTGAGTCTGGACGTAGTTACTCCTTTCACTTTAAACCTAATATTTGGGGCACAACAGAATTTACTTGCGCGTTTCAATTTGTGCAAGGCGAGATGCAAAAGTTCACCATCTATAACTTTCACAGGGACACAAATCGTTGCACTGATTGCTCGTGGGAAATTTATCGAGATGGCCCTTGTTTGATGCACCCAAAAGACACTGGAACTTATAACATGTGCTTTCCTTGGAACTAG
BLAST of CSPI01G33710 vs. TrEMBL
Match: B0F818_CUCME (Self-incompatibility protein 2 OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-36
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1

Query: 2   LYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWG 61
           L+A +ELIS+  PETTVTI+N++ GPLLG+HCRSK DDLG   + S +SYSF+F+PN+WG
Sbjct: 89  LHATDELISL-LPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWG 148

Query: 62  TTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 121
           TT F C F++V+G+   FTIY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 149 TTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 204

BLAST of CSPI01G33710 vs. TrEMBL
Match: B0F817_CUCME (Self-incompatibility protein 1 OS=Cucumis melo PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-36
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1

Query: 2   LYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWG 61
           L+A +ELIS+  PETTVTI+N++ GPLLG+HCRSK DDLG   + S +SYSF+F+PN+WG
Sbjct: 19  LHATDELISL-LPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWG 78

Query: 62  TTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 121
           TT F C F++V+G+   FTIY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 79  TTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 134

BLAST of CSPI01G33710 vs. TrEMBL
Match: B9SD51_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1070100 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-21
Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1

Query: 18  VTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQGEMQ 77
           + IIN   G  L VHC+SKDDDLGA  L    +Y F FKPN WG T F C+F +  GE++
Sbjct: 33  INIINNF-GVDLTVHCKSKDDDLGAHLLHDQEAYRFGFKPNYWGNTLFYCSFAWT-GEVK 92

Query: 78  KFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
            F IY   RD  RC DC W +  +GPC +   DTG  N C+ WN
Sbjct: 93  WFDIYVDERDYGRCLDCKWRVDENGPCFL-DNDTGEVNKCYQWN 133

BLAST of CSPI01G33710 vs. TrEMBL
Match: B9RWP1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023120 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 9.2e-21
Identity = 53/107 (49.53%), Postives = 68/107 (63.55%), Query Frame = 1

Query: 17  TVTIINKLAGPLLG--VHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQG 76
           TV I N L GP LG  +HC+SK+DDLG Q +    S+SF F+PN WGTT F C  ++ Q 
Sbjct: 35  TVKITNDL-GPKLGLKLHCKSKNDDLGEQQVPYKGSFSFRFRPNPWGTTRFYCQMKW-QN 94

Query: 77  EMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
            ++ F IY   RD  RC  C W I   GPCL++  DTG +++CFPWN
Sbjct: 95  IIRWFDIYVDDRDFERCVVCEWRIQASGPCLLN-SDTGKFDICFPWN 138

BLAST of CSPI01G33710 vs. TrEMBL
Match: A0A078DH16_BRANA (BnaC08g00850D protein OS=Brassica napus GN=BnaC08g00850D PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.6e-20
Identity = 48/107 (44.86%), Postives = 67/107 (62.62%), Query Frame = 1

Query: 14  PETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQ 73
           P+TTVT+IN L GPLL VHC+SKDDDLG   + + + Y F F+PN+W TT F C+FQ+  
Sbjct: 29  PDTTVTVINNLGGPLLTVHCKSKDDDLGIHIVAANKDYHFSFQPNVWKTTLFFCSFQW-N 88

Query: 74  GEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPW 121
            ++++F I++  RD       +W I  +GPC +     G    CFPW
Sbjct: 89  NQVKRFDIFDATRDEGVGEKFNWTIKPNGPCKL-----GKKVKCFPW 129

BLAST of CSPI01G33710 vs. TAIR10
Match: AT1G04645.1 (AT1G04645.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 104.0 bits (258), Expect = 6.7e-23
Identity = 46/105 (43.81%), Postives = 61/105 (58.10%), Query Frame = 1

Query: 16  TTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQGE 75
           T VT+ N + GP L +HC+SK DDLG   +   + Y F F+PN+W +T F C+FQ+   +
Sbjct: 29  TVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQW-DSQ 88

Query: 76  MQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPW 121
            + F IY+  RD   C DC WEI  DGPC +     G    CFPW
Sbjct: 89  FKSFDIYDAQRDQGICDDCQWEIKPDGPCRL-----GKKAKCFPW 127

BLAST of CSPI01G33710 vs. TAIR10
Match: AT3G17080.1 (AT3G17080.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19
Identity = 49/116 (42.24%), Postives = 66/116 (56.90%), Query Frame = 1

Query: 11  IGRPETTVTIINKLAGPL-LGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAF 70
           + R  T+V I N L G L L  HC+S++DDLG Q L  GRS+SF F P+I+G T F C F
Sbjct: 21  MSRASTSVVIYNDLGGGLPLRHHCKSREDDLGYQSLAPGRSWSFGFTPDIFGRTLFYCRF 80

Query: 71  QFVQGEMQKFTIYNFHRDTN----RCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
            +   E   F IY   RD       C  C W+I ++GPC  + K TG ++ C+ W+
Sbjct: 81  SW-GAESHIFDIYKQSRDKEFQEFGCKKCEWKIRKNGPCKFY-KKTGMFDHCYSWD 134

BLAST of CSPI01G33710 vs. TAIR10
Match: AT3G16970.1 (AT3G16970.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-19
Identity = 46/113 (40.71%), Postives = 67/113 (59.29%), Query Frame = 1

Query: 14  PETTVTIINKLAGPL-LGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFV 73
           P TTV I N L G L L  HC+SK+DDLG + +    ++SF F+P+++G T F C F + 
Sbjct: 26  PRTTVVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW- 85

Query: 74  QGEMQKFTIYNFHRDTN----RCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
             E+  F IY   RD       C  C W+I +DGPC ++ K++  +++C PWN
Sbjct: 86  DKELHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLN-KNSNMFDVCLPWN 136

BLAST of CSPI01G33710 vs. TAIR10
Match: AT4G16195.1 (AT4G16195.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 89.7 bits (221), Expect = 1.3e-18
Identity = 47/111 (42.34%), Postives = 65/111 (58.56%), Query Frame = 1

Query: 17  TVTIINKLAGPL-LGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQGE 76
           TV I N L   L L  HC+SKDDDLG + L+ G S+SF F    +G T + C+F +   E
Sbjct: 49  TVEINNDLGNQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSW-PNE 108

Query: 77  MQKFTIYNFHRDT---NRCTD--CSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
              F IY  HRD+   N+C    C W+I R+GPC  +  +T  +++C+PWN
Sbjct: 109 SHSFDIYKDHRDSGGDNKCESDRCVWKIRRNGPCRFN-DETKQFDLCYPWN 157

BLAST of CSPI01G33710 vs. TAIR10
Match: AT5G12060.1 (AT5G12060.1 Plant self-incompatibility protein S1 family)

HSP 1 Score: 87.4 bits (215), Expect = 6.5e-18
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 1

Query: 18  VTIINKLA-GPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQGEM 77
           V I N+L  G  L +HC+S DDDLG + L    S+SF F+ +I GTT F C F +  G+ 
Sbjct: 39  VRITNRLGDGLTLNLHCKSADDDLGLKILAPNGSWSFKFRTSIVGTTLFYCHFTW-PGQS 98

Query: 78  QKFTIYNFHRDTNR----CTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
           ++F IY+  RD  R    C +C W+I   GPC+    D   +N+C+ WN
Sbjct: 99  KRFDIYDDDRDGVRSHISCINCIWDISIQGPCMFSESD-HAFNICYDWN 145

BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659114866|ref|XP_008457263.1| (PREDICTED: uncharacterized protein LOC103496988 [Cucumis melo])

HSP 1 Score: 205.7 bits (522), Expect = 4.7e-50
Identity = 92/120 (76.67%), Postives = 101/120 (84.17%), Query Frame = 1

Query: 2   LYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWG 61
           LYADEELIS+  PETTVT  NKLAG ++GVHCRSKDDDLG   +ES RSYSFHF+PNIWG
Sbjct: 63  LYADEELISL-LPETTVTTSNKLAGLVIGVHCRSKDDDLGLHIIESERSYSFHFRPNIWG 122

Query: 62  TTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 121
           TT+FTC+FQFV GE+  FT YNFHRD N CT   W+IYRDGPCLMHPKDTGTYNMCF WN
Sbjct: 123 TTQFTCSFQFVHGEIHNFTTYNFHRDINCCT---WKIYRDGPCLMHPKDTGTYNMCFLWN 178

BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659128416|ref|XP_008464194.1| (PREDICTED: uncharacterized protein LOC103502132 [Cucumis melo])

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 87/116 (75.00%), Postives = 97/116 (83.62%), Query Frame = 1

Query: 1   MLYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIW 60
           ++Y DEELIS+  PETTVT INKL G +LGVHCRSKDDDLG   LES  SYSFHF+PNIW
Sbjct: 59  IVYVDEELISL-LPETTVTTINKLVGQVLGVHCRSKDDDLGVHILESEHSYSFHFRPNIW 118

Query: 61  GTTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNM 117
           GTT+FTC FQFVQGEM  FTIYNFHRD N CT+C+WEIYR+ PCLMHP +T TYNM
Sbjct: 119 GTTQFTCNFQFVQGEMHNFTIYNFHRDINHCTNCTWEIYREIPCLMHPNNTETYNM 173

BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|164449263|gb|ABY56092.1| (self-incompatibility protein 2 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1

Query: 2   LYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWG 61
           L+A +ELIS+  PETTVTI+N++ GPLLG+HCRSK DDLG   + S +SYSF+F+PN+WG
Sbjct: 89  LHATDELISL-LPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWG 148

Query: 62  TTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 121
           TT F C F++V+G+   FTIY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 149 TTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 204

BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|659121590|ref|XP_008460735.1| (PREDICTED: uncharacterized protein LOC103499497 [Cucumis melo])

HSP 1 Score: 159.1 bits (401), Expect = 5.0e-36
Identity = 68/120 (56.67%), Postives = 89/120 (74.17%), Query Frame = 1

Query: 2   LYADEELISIGRPETTVTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWG 61
           L+A +ELIS+  PETTVTI+N++ GPLLG+HCRSK DDLG   + S +SYSF+F+PN+WG
Sbjct: 19  LHATDELISL-LPETTVTIVNEVGGPLLGIHCRSKQDDLGVNVVSSDKSYSFNFRPNVWG 78

Query: 62  TTEFTCAFQFVQGEMQKFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 121
           TT F C F++V+G+   FTIY+F RD   CT+C W +Y  GPCL H + + T   CFPWN
Sbjct: 79  TTLFYCVFEWVKGQPHYFTIYDFKRDGKTCTNCRWLVYASGPCLQHSETSIT---CFPWN 134

BLAST of CSPI01G33710 vs. NCBI nr
Match: gi|223536850|gb|EEF38489.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-21
Identity = 51/104 (49.04%), Postives = 62/104 (59.62%), Query Frame = 1

Query: 18  VTIINKLAGPLLGVHCRSKDDDLGAQFLESGRSYSFHFKPNIWGTTEFTCAFQFVQGEMQ 77
           + IIN   G  L VHC+SKDDDLGA  L    +Y F FKPN WG T F C+F +  GE++
Sbjct: 33  INIINNF-GVDLTVHCKSKDDDLGAHLLHDQEAYRFGFKPNYWGNTLFYCSFAWT-GEVK 92

Query: 78  KFTIYNFHRDTNRCTDCSWEIYRDGPCLMHPKDTGTYNMCFPWN 122
            F IY   RD  RC DC W +  +GPC +   DTG  N C+ WN
Sbjct: 93  WFDIYVDERDYGRCLDCKWRVDENGPCFL-DNDTGEVNKCYQWN 133

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
B0F818_CUCME3.5e-3656.67Self-incompatibility protein 2 OS=Cucumis melo PE=4 SV=1[more]
B0F817_CUCME3.5e-3656.67Self-incompatibility protein 1 OS=Cucumis melo PE=4 SV=1[more]
B9SD51_RICCO1.9e-2149.04Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1070100 PE=4 SV=1[more]
B9RWP1_RICCO9.2e-2149.53Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1023120 PE=4 SV=1[more]
A0A078DH16_BRANA1.6e-2044.86BnaC08g00850D protein OS=Brassica napus GN=BnaC08g00850D PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G04645.16.7e-2343.81 Plant self-incompatibility protein S1 family[more]
AT3G17080.11.2e-1942.24 Plant self-incompatibility protein S1 family[more]
AT3G16970.11.2e-1940.71 Plant self-incompatibility protein S1 family[more]
AT4G16195.11.3e-1842.34 Plant self-incompatibility protein S1 family[more]
AT5G12060.16.5e-1841.28 Plant self-incompatibility protein S1 family[more]
Match NameE-valueIdentityDescription
gi|659114866|ref|XP_008457263.1|4.7e-5076.67PREDICTED: uncharacterized protein LOC103496988 [Cucumis melo][more]
gi|659128416|ref|XP_008464194.1|1.3e-4775.00PREDICTED: uncharacterized protein LOC103502132 [Cucumis melo][more]
gi|164449263|gb|ABY56092.1|5.0e-3656.67self-incompatibility protein 2 [Cucumis melo][more]
gi|659121590|ref|XP_008460735.1|5.0e-3656.67PREDICTED: uncharacterized protein LOC103499497 [Cucumis melo][more]
gi|223536850|gb|EEF38489.1|2.7e-2149.04conserved hypothetical protein [Ricinus communis][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010264Self-incomp_S1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G33710.1CSPI01G33710.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 17..120
score: 1.0
NoneNo IPR availablePANTHERPTHR31232FAMILY NOT NAMEDcoord: 13..121
score: 2.8
NoneNo IPR availablePANTHERPTHR31232:SF5GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K14A17-RELATEDcoord: 13..121
score: 2.8

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None