CSPI01G33440 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G33440
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	ATP-dependent RNA helicase
Location	Chr1 : 28355387 .. 28366421 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGCGACTGCGACAACTTTAGCGGCGGCCATCGACTACTGCAGCTTCCAGCAAAATCCTTGGCGACGAGCGGCAACTTGCTTGGGCGAGGGAAGGTTGGTTTGCAATTCTTGTGATTCATTAACGCCATCAAAGAAGGGGAGCACAGTGTCACCAACCGGCTCCCAGGCTGAACTCGGTATTGGCACATGTTTTCTCTTTGAAGTTTTTATGAGTTTCAATTAGTACTGTCTTATTGGTCTACGAGCATATGGTGTTCACTTCTCCCTCGTTCATGGTTGCAGCAGCCGCACGCCGAATTGAATTCCCAACGGCAGCTCACTCTTTTCAGCAAAAGTGGTAAAAATTTCGTTACAAACTCAAGGGGGATTCTATGGGGAAGCAGGACGAACCTCTCCATGTTAGTTCCAAAGCGGAGCTTAAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGCGGGTTCGAGTCCTTAGGTCTCAGTGCCAATGTCTTCAGGGGAATCAAGCGCAAGGGTTACAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGGGCCGATGTCGTGGCCATGGCACGCACTGGTTCCGGTAAAACTGCTGCGTTTTTGGTGCCTATGTTGGAGCGCCTTAAACAGCACGAACCTCAGGGTGGTGTTCGGGCTCTTATTTTGTCTCCTACAAGGGACTTGGCGCTTCAAACTCTCAAGTTCACTAAGGAGCTTGGAAAATTCACGGGTCAGTCACATTCTCTTAATTAGATTGTTAGGATTTGAATGTTTATTTGTACGATCAGTTTGGGTGTTCTTAAACTGAAATAACCATTGGAACATATTTGATCTCAGGATTATAAATGTTTTCTGTTATTGTTTATGACATTGAGTCCAATTGTTAGCTATTCTAGCTACCAAACATATGATAAATGTCTTTATTGAGTATATGTATATATGGTTGGAGGTTTCTTTTAGGTAAATTGTTTTTATTTACTTGTTTATTTAATTTTTTTTACGTATAAGAAATAATTTCGTTGACGAATGAAATATACAAAAGAGATCAATGATACATCAAGATTACACAATGCTTTCTCTTTTAGTAAGAAAGGAAGCATAAGAGTAAGATGCAAAGTGGCAAGATAATTTGATAATGTTTGTTGATTCTCGCTACTGCTCCTTGATTCACACCTCCTCCCCTTACTTCTAGAAAAAAGTTGCAGATTGAGCTAGTTGTGCAAGAATTCACAAAGTCGGAACTGAAAGCATAAAAAGAGAAAACCTCACCTTCAATCTTGGATTGGAAGAATTCATACCGTCATCTTTGACGTTGATATTAAGCCATTTGTGCAAGACCACTCTAGGCCAGAAAAGTTGTAGGTAGCACCCACAACAATGTATTCAGTCCATGTTTGACATAAGTTGTAGATTGAATTCTTAGAAGAAGTTGTAGACAAGTAGATTGAAGAAGAAGAAAGAAGGTAACGGTTGGAGGAGGAGCGAGATCGAGAATCAAAGAGTGGGAGTGAGAATCGAGGAGCAAAGACATCACACATGCATTTTTGGTTGATTGAGTAATTTCATTCGACGATGAGGTAACTCGTAAGCAAAACGGTAAAAGAAAACAAGGATCTTCGAAAGTTCAGTTAGATTTCATTTAGGCCTCCAAAAATAGACCATTGGCACCAATTAGTCAAAATTTTGCTCCAAAAATTCCACGCCGAAGAATAGTGGTTAAATTTATGGCTTTGTGTTTCATCATCATCTTTGATCTTTTTTTTATGAAAATAGACAACTTTTTTTGAGAAAGAATGAGAGAATACGAGGGCATACCAAAAAACAAGCCCACCAAAAAACAAGCCCTACAAGAAAGACTTCCTACTTAGCAAAATGTTACGAAGGGAATAATTACAAAAAAACTTCGAAACTGAAGCCCAAAGATAAGCATGGTATCTCACTAAGGACCAACTCTCTGAAGGGTCCTTCTCAAGATCTCTAAAAACTCTTGTTCCTTTCACCCAAAATATCCCAAACCACATTGTACACCCCTACCAGCCACAAAAACCAGTTTCTCTCTTTAAAAGCCGGATGCAAAAGAAAGTCATCGATCGTAGCACAAATAGTTCTTTATCTAGCAATTTGAAAACCAACTCTTGAAAGGAACAAAACCATGCAAAACTAATGTCCTGAAAATCTCAAAGCAGGTGATCTAGGTTTTCCTCTGCCTTTCGACAGAGAATACAACAGGACGACCCCATAAGCATAGGCATCTTCTTAAGAAGTCTATCCAAGGCATTCACACGACCTAAAAAAACCTGATATTCTTTTGTATCTTTATCTTCCAAACCTTGCCAAAAATTGACTTACTACTAGGGGAGGGGTCTAACAACAACCTGAATAAAGATTTACATAAGAAGTCTTTCGAAGGGTTGAGCCTCCAAAGACGAACATCCTTCCTCCCCTCCCTAAGGTCATACTCATTGAGCAAGGAAAGAAGAGAAGTCACTTATGTTGTTTCCCTGTTGGACAAGTGGAACCTAAAAGGAATACCAAACTTCCTGCCCAAACCAAAAAGTCAGAGATCTTTGACTATGGTTACACTAGCTTGGAAGATGGTCATATAAGGCTAAAGGCATGTCCAGTGTTTTAAAAGGCGCAGCTAGGCACGCGGCTGGGGCTTATTCTTAAAGAGGCGAGGCGTTTTCAATAAGGCTGCGCGCCTAGGCATGGGCTTTTCTAGAAGATGTGGGTTGGGATTTAATAAAAAAAAAATTATTATGTATGTTTTTTGAAGCTATTACTTGAAAGTTAAGAAATGAAACGACTCTTCTTCTCCCGTTTAAACCGAGTGGCTTCTCTTCTTCAACGAACGTCTTCCTCTGCCTCTTCCGTTCCCTTTCTGCTTCTGCCTTCAACGAATCTCTGTCACCAGTGTGGGCAAGGGCCATCGGTTAGCCTTCTTCTTCTTCACACAAATCACAAAAGCTATTTTTTCCATACCATCTTCTTCAAAGCAAGAACTTGGTGCTGCCTTTACTCTGTTTTTTGGTGCAAAAACAGAGGGGAAGAGAAGACAAAGAAGCTTCCCAAAATCATTACCATTTCCGGTTAGCCAAATTTGCAATCTCTTTTTAACATAAATACCTTCTTGTCTTTTTTTTAACACAAACCTGCTGTTTTTTTTGAACTAAAACAGAAGTGCAGATTTAAAACCTCTACTTTCTAAGGTATTTGTTTTTTTTAACACAAATACCTTTTGTATTTTTTGGAACTAAAACAGCAGTAGTTTTTTCAATAAGATTACAAATCAGTATGAATTACTTCAAAAAAAATACTGATTTGTTTTTTTCTTTTGTTAATTTAAAAAAATATTTTTGTTCATGAAAGGTGAATACTTTACGATGATACTAAATTAGTGAATAGCATCACCCGGACATGGTACTAATCCAAGAATCTAAAATGGAAAGTCTGGAAGCAAATTCTATTTAAACAATTTGGAGTTCTATGGATATAGGATGGGAATCAGTGGAATCTTTTGGTGCTTCCAGAGGCATTCTTACCTTATGGGATAAAAGTAAAATCACAATGGTGGAAACCATAAGAGGACGTTATTCCCTCTCAATAAAATGTGTAAACTTTGTGCAAGAAGTGTTGTTGGGTTACTAATGTTTATGGTCCGTGTGGTTATAGAGAGAGGAAACTTGTTTGGCTAAAATTATTAACAATTACAGAATGCGGTGATGAGGCTTGGTGTTTGGTGTTTGGGAGGAGATTTTAACATCACTAGATGGGTCTATGAGAGGTTTCCAGTTGGCAGAAGCACAAGAGGGATGAGACAGTTTAATGCCTTTATAGATTCTGCCAATCTAATGGAAACTCCTTTCAAAATGGCAAATTTATGGTCAAGAGAGGGTGACACTGCTGCAAGATCTATATTGGACAGATTTTTTATTAACAGTAAATGGGATGATGAATTTGAAAACTCAAGAGTGACCCATAAAGTAAGATTCTTCTCCGATCACTTTCCTTTATTACTAGAGACAGGTGCGATACTATGGGGGCCATCCCCATCCAGATTTTGCAATAGTTGGTTGTTGATAAAAGAGTGCAACAAGGTCATAGAGGAAGTCATAGAGATTTCTAAAAGAAACGCAGCAGCTAGGTGTTCTTCAAATACAGAATTCAACGATTACTACATTCAAGACATTTGCCTCAATTGGATCGCCTTCATTTGATGAGATTCAATGTAGTTTTCCCTGATTGCCAGTTCAGAATTAGTGCTTCTATAGTTTGGATGGGTTTTATATGTATTTCTGCCATTATGTTTTTATTTTCCAGCCTTGCTTTTGTCTACCATAGGTAGCTTCTGTTGTTATTTTGCTTGTTCCTTTGGTCTTTTCATGACCTTAGTATTGTTATTGTACTTTAGTCTTTTCTTTGTATTTTGAATATAATGAGGGTGCTATGGGAGTGTCATCCTAGTTGAGAAGTTCGGGTGCATCTACTGATCCTATCCATCTCTCTCTCTCCCCTACCTTTCTTGGCTTCCCTATTATTCTCATCATATAGCCCTCTTGTACATTGAGTTTATTAATAATAAAGAAGCTTGTCTCCTTTTCAAAAAAACTAAATTAGTGAATACTTCATACTAATTTTGATAACTTAGGTCATAGATGGCTAATGATAGTTCGAGCGAAGATTCAGCGTGGAAATATGGTCGATTGCAAAATGACCAAGATATAAATACGTTTGTCTGTGCATTTTGTTCGTTAGTATCAAAAGGAGAGGTATATAGAATGAAACAGCACCTCGTTGGTGGTTAAAGAGATGCCACAACTTGTAGAAAATGTCCGGATCACGTGAAGAAAGCAATTAAAGAGTACATGTCCAAGAAAAAGGAGACTAAAGAACAAAGAAATTTGATTGTGGACATTGATGTAGAAGATTATGGTATCGAGGATGAAGATGAAAGGAGTGTTAGTGTAAACAACATAGCAACACCATGCCACATGTCTTTGAAGAACATCTTTGGTGCTGACTGCTGATTACCTTTATGAGAGATTTTCCACGGGGGTAATTTGACCTACTTAGGGCAAGACTCTTTCCATGTAGCTTGGGTCAATAATGGATCCAAAAGTGAGGAGTCGGTGAGTCATCCATGGTAGATAGGAAAGTCATTAACCAGAGAAGGAGCCATTTCTCCAATATGTAATAGTAGAATCTAAACAACAATCCTTGAAAGGTTGTCAATGATTACACCAAAAAAAAGAAAAGAAAAAAAAGAAAAAAGAAATCTCTAAAGCTTCTCTTGAAAAATTATTTTCGCCTTGAAAATTTCTTGAATTTCTTTTTTGTTGAAACCTTCTAAAAGTTCTAAAGACTCCTTTGAGACCATAGGATTTTTTTTGGTCCAATTTGAAGGGGAGTCAGCCAAAAGCATTTGAAGCCAACCTAATAAATCAAGGAGAGGTTGTGTACCCCCGTTAACACGAACAAGTCACTCCAAATATCAGCAACACAGGAACATTGGGTGAAGATGTGATCCTGTGGTTAATTATCTTTTTGACAAAGACAACAATACAACATCAATGGGGAGAGTTGAACTTAAGGGCATCTCATGAACTTTTTTTTTGTAGAGGGTAACGGAGGCATTCTGATGCTTGGAATACAATTGTTGAGCCATATCCCAAATGTCCTTAGCGGTTGCAGCATACAGTAAGGGCTAGCCAGTTTGTATATTGTTGATCAATGTGGACCAAATAAGAGAGTCCTCCCCTTTCCAATATCGTTCATGAGGGTCTCCCGGTGTAGGATGAGGTATCTCTCCTTTCAAGAAACCAAACTTGTGGTGACCTTCAAGGATCATTTTAATAGACTCGGACCACGAAAAAATAGTTTTGACCATTCAATTTCTCCCCCTAGAAAATATCCTATAGATTGTGCCACTGGATTAGACATAAAAAGAGGACAAAGCAGGGAGTGAGGTTTCCAGATTTTTAGAATACACCGGTGAGGTCAAACAGTTGTTGGACAGAGCCCCTAGTGTTGCTTTAGCTGCTGTAGTTTGTTGACATAGCATGTCCAGCTGATGTTCAACAATACTAGGAGATGGACCTTGCTCATGGGCCCTTGATTGTGCTTGAGGACTCACCACCTCAAAGGTCGAGTGGGCTAGATTTCCAACCTCGGGGTAGCCACTAGGGTTTGTGGCTAACCTAGTAGGAGGTGGCTCAATCACACCAACGACAGAAGATTGAGCCAAGGTCAACGACTGGGCAAGTCCTGATGGTGGTGCATGTGAGGGCGTTGGCAGTAGTGTGTGAGGGCCAGGCAACACGTATGAGGGAATTCTGACCGGTGGCATGTGAGGGACTTCTGCGGTTGAAGACTGTTGATTGCCAGACAGTTGCGGCTGGGTAGGAAGGCAGGTCGGTGGGTTTTGAAGATGCCGGAACCACTCATCAATGGTGGCGCTGATCTAGGCATCAATTATGGCAGCGACACCTAAACTAATGTCAACGTCCGTCCCTTCTACCAGGGTTCCATCACGTGTTTGATTGTCTAGGGTTTCTTCGATATCCCGCTCTGATACCATATTGAAAGTAGAGATGTAGAACAAACACAAATCTATGTGAAGACGCTAGTATAGGAAGAAAAACCACGATATTGATATTTCTTATTATTTTCTTATTATAATAAAGGTATAAAGGGAAAAAATATTTATAGGCAACACAAGATTAATTAAAATAGTAAAAAATTAGGGCAAATAAAATTTCAACTACCCTTGGGCTTTCAACATGACCCAAGCCCACTATTTCTAACACTTGACAATAAGACTTTCCTTGAAAATATTTGGGGGATCCATAGGCTCAATATAACCAAAATTCAAGCAAAAAATTACCTCTATTGAAGTCGGTAATTTCAATGGTAGTAGGTATACCACATAAATTCTGTTTGACTTAGATTCTCGCTTTGCGGCAATTGGTCAGATTTAGCGTCTCGTGGCAATGTTCCAACCTCTCGAAACACTCTTCAATGGCTTCAAAGGTTTTTATACACCAGTAGTCCTGAAGGAGGGTTTCTAATTCTCAACCATTCTCCAAAGTCTATCATTACCAGTGGCCAATTGTGTTTAAATCTATCCTATTTTTTGAACTTAAGGTGTAACGACCCCATCTCCTGCCATCTCCCAGGTTCATTGATGAAGTCTTCAACAAAGCCCTTGAAACTTGAGAACTTTTTCGAACTTATCTCCAAATATTTTTATCACCCATTGGCTCTCTTTTGTTGTCTTCAAAACACAGAAAACTTGAGAACTTTCTCCTTCATCATTGGTGACAGACTGATAATCAACTCTGATGGCACTCTGTTTTTCATTCTTTTCATCAAGTGCTAAGTTACCATCCAATTTAACTTTATCTGCAAAGCTCGTACTCTTAGCCTGTGTTGGATTAAAAGACGTGGCAATTTTACGTGAAGACCAACTTATATACTCTGCTTTTGAAAGGAAATTCTCCAGCATTTTGTGAAATGCCAACCTCTCCTGTTTGTTTTCTCCCGAACACACTCGAATGATGGAGTGTCCACCTGAAAATGGCCAAAGGTCACAACATAACACCCATCCCTTCTTTGCTTTGAATTTTGACAACTTCAGTCTTCCTCAGTCTTACTCCCCCTGTTTCTTTTGATCTTTCTGACCTCTTAATAACTCCTATAATGATAAAGATCTTTAAGCTTCCACATCTTCAACAAGAAAGCTATCGTCTTCTAATCAAATGAGATAATACGATTGAAGAACTTTGCAACTTACCACTTCCATTTCAGTCTTGCTAATAGCTATAGCGGCATCAACAATGCCGGAAAATTACAGAGAAGATTGCTCTCTCACTACTTATGTTATGTACAATTGGAATCACTCCTTTATCTTTAATGGACTGCTCTTTTGCTCAAAGCTACTGAATTTGGTGCTGGAAGTGCGTTTGGATGGTCTATTGCCCTGTCTTAGCGTTTTTGACCTTCTTCCATCCATCTTTATGGAACTTCCTTTTGAGGAATGAAAGAAGATTGTTTTGCACGCTATTAATCGAGCCTTTTTTTTGGGGGACCTTTGGTGTGAAAGAAACAATCAGATCATCAACAATAAGTTCTCTATCCAGAAGTATTATGGGTTGGTTACTTTTTAATGCATTTAGTTGAGGCAAATACTAACAACAATGCTTGCAAATATGACAGCAAAATGCTTGATAAGTTAAAGCAAACTATAGAATTTTTTGAATGGTGCTCCGATCAGAATGTGAACTGGGATAAATTGACTTTATGTGGTATTAACATAGATGAGAATGTGTTGGCCTCCACTGCTGCAAGTCTGATCATCTTCCATTGTTGTACCTTGGTTTTACTGTTGGGTGGGTATCCAAAGCAATCCTCTTTTTTGGAAACCGTTGATTGATAAAATTCACGCAAGGTTATATAAATGGAAGAGATTTAATCTTTCTAGAGGCGTAAGAGCTACTTTGTGTAAGTCGGTTTTGTACATTCTTCCCACTTACTATATGTCAGCATTTATTATGCCCAAAGGTGTCTTATCAACTTTAGAAAGAATTCTAAGGAACTTCTTTTGGGAGGGACATAATGGCAGCAAGATTAATCAACTGGTAAAATGGGAAACAGTTCACAAATCGATTGCTGATGGAGGGCTCGGTTTGGGCAGTTTCAAGGCCCAAATTTGGCTCTTCTAGCCAAATGAGGGTGGCAATACATGGAAGAAGAAGATGCATTATGGCACAAGGTGGTTAGAAGCATTCATGACAAACGCTCTTTTAATTAGCACACAGCTGGAAAAGATGGTAAGAGCTTGAGAAGCCCTTGGGTTTGTATTTCAGAACTTGGCTGAAAGTATGCATTGGCAAAATTCAAGCTAGAAAATGGACGCCGGATTGCATTTTGGGTAGACTTGTGGGAGGGTGAGGTTCCCTTTAATATTTTGTTCTCAAGACTTTTCAGAATTGCCCTACTTTTAAAATGGTCGGTAGCCAATTATTGGGACTTTGCTCTGAACTTCTGGTCAATTACCTTTTTTCTTTGCTAAAGGAAATAGAGGTCTTTGACTTTCAGGAATTGCTCAGCATAATTGCACTATGGAGAGTTTCTGAGGTGTTTGATAGAAGAACATGGTCTTTAGTAGGCAAAAGTACCTTTTCAATAAAATCTCTCACAACTCATCTATCTCCATCTTCCCCATTGAACAAAGAGTTGTATAAGGCTTTATGGTAGATCCATAGTCCAAGAAGAACGAATATTCTTGTTTGGATAATGCTGTTTCGCCTTTTGAAGAGTGAATATTCAGGCTGCTTTTCTTCATTCCATTTACCCGTTACGTCATCAGTATGGAGAAGACCCCCTCCACCTATTCTTCTTTTGCTCTTATTCAGCTAGATTTTGGACGAATTTAGATTTGTTAATTAATTTACATTTGCATACTTGTTAGATTTTGGAATTAATTTTGTTTCAGAAGTAGATCATTTGTCTTCAATGACATATAATGGAAAGCTTGAAGATTAGTTGTGCTATGAACTTTCAATTGGTTATAATATTTTGCAATGTACCACTAATTTTCCTATTTTTCACTCATAATGAGTTTAATTATCATTTAAATTTTGTTGCAGATCTTCGAATTAGTTTATTGGTAGGCGGTGATAGTATGGAAACTCAGTTTGAAGAATTGGCTCAAAGTCCTGATGTTATAATTGCTACTCCTGGAAGGCTGATGCATCATTTGGCCGAGGTTGATGACATGACCTTGCGCACAGTGGAATATGTAGTTTTTGATGAAGCTGATTGTCTCTTTGACATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAACCGTCAGACCTTGCTTTTTAGTGCGACCTTACCAAGTGTTCTTGCAGAGTTTGCGAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATTTAGACACTAAGATTAGCCCCGATCTAAAGGTTGTATTTTTTACTTTGCGTCAAGAAGAGAAAAATGCAGCATTGTTGTATTTGATCAGAGAGCAAATCAGTGCGGATCAACAAAGTTTGATTTTTGTATCCACTAGGCATCATGTGGAATTCTTAAATGTTTTGTTCAGAGAGGAAGGTATTGAGCCGTCTGTCTGTTATGGTGAAATGGACCAAGATGCTCGCAAAATTCATATATCAAGATTTAGGGCAAGAAGAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGCATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCCAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTACAGCATTTTCATTTGTGACTTCTGAAGATCTCCCTAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCACCTACTGAGGAGGAAGTCTTACTTGATAAGGAGGGGGTATTCTCTAAAATAGACCATGCAATTGCAAGTGGAGAAACTGTATATGGACGTCTCCCTCAGACAGTTATTGATCTTGCTTCTGATAGAATTAGAGAAACTATTGATTCTTCTGCAGACTTGATTTCTCTGCAGAAAACTTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCTCTACCTTCAAAAGAGTCTATCAGAAGAGCAAAAGACTTACCTCGTGAAGGGTTGCATCCAATTTTTAAAACTGCTCTTGAAGGTGGTGAATTAATGGCATTGGCCTTCTCAGAGCGCTTAAAAACATTCAGGTCAATGCAAATAGATTATTTTCCCCTTTTGCCAATAGGTTTCACATTTCTACAAAAGTTTAGTTTTTGCTTGAGAAATCATGATCACAACAATTGTTTATTTGCACCAGACCCAAGCAGACAATACTGGAGGCTGAAGGAGAAACTTCCAAGTCAAGGCATAGACAGGTTTGTTTATTCATTTTGTGACTTCCCTAACTTGTGGC

mRNA sequence

ATGGGGAAGCAGGACGAACCTCTCCATGTTAGTTCCAAAGCGGAGCTTAAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGCGGGTTCGAGTCCTTAGGTCTCAGTGCCAATGTCTTCAGGGGAATCAAGCGCAAGGGTTACAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGGGCCGATGTCGTGGCCATGGCACGCACTGGTTCCGGTAAAACTGCTGCGTTTTTGGTGCCTATGTTGGAGCGCCTTAAACAGCACGAACCTCAGGGTGGTGTTCGGGCTCTTATTTTGTCTCCTACAAGGGACTTGGCGCTTCAAACTCTCAAGTTCACTAAGGAGCTTGGAAAATTCACGGATCTTCGAATTAGTTTATTGGTAGGCGGTGATAGTATGGAAACTCAGTTTGAAGAATTGGCTCAAAGTCCTGATGTTATAATTGCTACTCCTGGAAGGCTGATGCATCATTTGGCCGAGGTTGATGACATGACCTTGCGCACAGTGGAATATGTAGTTTTTGATGAAGCTGATTGTCTCTTTGACATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAACCGTCAGACCTTGCTTTTTAGTGCGACCTTACCAAGTGTTCTTGCAGAGTTTGCGAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATTTAGACACTAAGATTAGCCCCGATCTAAAGGTTGTATTTTTTACTTTGCGTCAAGAAGAGAAAAATGCAGCATTGTTGTATTTGATCAGAGAGCAAATCAGTGCGGATCAACAAAGTTTGATTTTTGTATCCACTAGGCATCATGTGGAATTCTTAAATGTTTTGTTCAGAGAGGAAGGTATTGAGCCGTCTGTCTGTTATGGTGAAATGGACCAAGATGCTCGCAAAATTCATATATCAAGATTTAGGGCAAGAAGAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGCATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCCAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTACAGCATTTTCATTTGTGACTTCTGAAGATCTCCCTAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCACCTACTGAGGAGGAAGTCTTACTTGATAAGGAGGGGGTATTCTCTAAAATAGACCATGCAATTGCAAGTGGAGAAACTGTATATGGACGTCTCCCTCAGACAGTTATTGATCTTGCTTCTGATAGAATTAGAGAAACTATTGATTCTTCTGCAGACTTGATTTCTCTGCAGAAAACTTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCTCTACCTTCAAAAGAGTCTATCAGAAGAGCAAAAGACTTACCTCGTGAAGGGTTGCATCCAATTTTTAAAACTGCTCTTGAAGGTGGTGAATTAATGGCATTGGCCTTCTCAGAGCGCTTAAAAACATTCAGACCCAAGCAGACAATACTGGAGGCTGAAGGAGAAACTTCCAAGTCAAGGCATAGACAGGTTTGTTTATTCATTTTGTGA

Coding sequence (CDS)

ATGGGGAAGCAGGACGAACCTCTCCATGTTAGTTCCAAAGCGGAGCTTAAGCGAAGAGAGAAGCAGCAGAAGAAGGCAAAGTCTGGCGGGTTCGAGTCCTTAGGTCTCAGTGCCAATGTCTTCAGGGGAATCAAGCGCAAGGGTTACAGAGTGCCCACTCCAATTCAGAGGAAAACCATGCCGCTCATTCTTTCCGGGGCCGATGTCGTGGCCATGGCACGCACTGGTTCCGGTAAAACTGCTGCGTTTTTGGTGCCTATGTTGGAGCGCCTTAAACAGCACGAACCTCAGGGTGGTGTTCGGGCTCTTATTTTGTCTCCTACAAGGGACTTGGCGCTTCAAACTCTCAAGTTCACTAAGGAGCTTGGAAAATTCACGGATCTTCGAATTAGTTTATTGGTAGGCGGTGATAGTATGGAAACTCAGTTTGAAGAATTGGCTCAAAGTCCTGATGTTATAATTGCTACTCCTGGAAGGCTGATGCATCATTTGGCCGAGGTTGATGACATGACCTTGCGCACAGTGGAATATGTAGTTTTTGATGAAGCTGATTGTCTCTTTGACATGGGTTTTGCTGAGCAGTTGCATAAAATCCTTGCACAACTGAGTGAGAACCGTCAGACCTTGCTTTTTAGTGCGACCTTACCAAGTGTTCTTGCAGAGTTTGCGAAGGCTGGTCTTCGTGATCCCCAGCTTGTGCGCCTTGATTTAGACACTAAGATTAGCCCCGATCTAAAGGTTGTATTTTTTACTTTGCGTCAAGAAGAGAAAAATGCAGCATTGTTGTATTTGATCAGAGAGCAAATCAGTGCGGATCAACAAAGTTTGATTTTTGTATCCACTAGGCATCATGTGGAATTCTTAAATGTTTTGTTCAGAGAGGAAGGTATTGAGCCGTCTGTCTGTTATGGTGAAATGGACCAAGATGCTCGCAAAATTCATATATCAAGATTTAGGGCAAGAAGAACAATGTTCTTAATAGTGACTGATGTTGCAGCTAGGGGCATTGACATCCCATTGCTTGATAATGTTATCAACTGGGACTTCCCTCCAAAACCCAAAATCTTCGTACACCGAGTTGGACGAGCTGCAAGGGCTGGTCGAACTGGTACAGCATTTTCATTTGTGACTTCTGAAGATCTCCCTAACCTTTTAGATCTTCATCTTTTTCTCTCAAAACCTATAAGAGCTGCACCTACTGAGGAGGAAGTCTTACTTGATAAGGAGGGGGTATTCTCTAAAATAGACCATGCAATTGCAAGTGGAGAAACTGTATATGGACGTCTCCCTCAGACAGTTATTGATCTTGCTTCTGATAGAATTAGAGAAACTATTGATTCTTCTGCAGACTTGATTTCTCTGCAGAAAACTTGTTCAAATGCATTTCGTATGTATTCAAAGTCAAAACCTCTACCTTCAAAAGAGTCTATCAGAAGAGCAAAAGACTTACCTCGTGAAGGGTTGCATCCAATTTTTAAAACTGCTCTTGAAGGTGGTGAATTAATGGCATTGGCCTTCTCAGAGCGCTTAAAAACATTCAGACCCAAGCAGACAATACTGGAGGCTGAAGGAGAAACTTCCAAGTCAAGGCATAGACAGGTTTGTTTATTCATTTTGTGA

Homology

[Close]

BLAST of CSPI01G33440 vs. Swiss-Prot
Match: RH29_ARATH (Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana GN=RH29 PE=3 SV=1)

HSP 1 Score: 818.1 bits (2112), Expect = 5.5e-236
Identity = 411/522 (78.74%), Postives = 462/522 (88.51%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSS  EL R+EKQ+KK KSGGFESL L  NVF  IK+KGY+VPTPIQRKTMPLILSG DV
Sbjct: 9   VSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDV 68

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELGKFTDLR
Sbjct: 69  VAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLR 128

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           +SLLVGGDSME QFEEL + PDVIIATPGRLMH L+EVDDMTLRTVEYVVFDEAD LF M
Sbjct: 129 VSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGM 188

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLH+IL QLSENRQTLLFSATLPS LAEFAKAGLR+PQLVRLD++ KISPDLK+ F
Sbjct: 189 GFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSF 248

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
            T+R EEK +ALLYL+RE IS+DQQ+LIFVST+HHVEF+N LF+ E IEPSVCYG+MDQD
Sbjct: 249 LTVRPEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQD 308

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TM LIVTD+AARGIDIPLLDNVINWDFPP+PKIFVHRVGRAARAGRT
Sbjct: 309 ARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRT 368

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           G A+SFVT ED+P +LDLHLFLSKP+R APTE+EVL + E V +K   AI SG TVYGR 
Sbjct: 369 GCAYSFVTPEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRF 428

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQ  IDL  +R RE IDSSA+L SL++T + AFR+YSK+KP PSKESIRRAKDLPREGLH
Sbjct: 429 PQKTIDLIFNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGLH 488

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRH 532
           PIF++ +E GEL A++F +++K FRPKQTILEAEGE +KS+H
Sbjct: 489 PIFRSIIETGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKH 530

[Close]

BLAST of CSPI01G33440 vs. Swiss-Prot
Match: RH29_ORYSI (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica GN=OsI_028228 PE=2 SV=2)

HSP 1 Score: 777.7 bits (2007), Expect = 8.2e-224
Identity = 377/510 (73.92%), Postives = 449/510 (88.04%), Query Frame = 1


Query: 23  QKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAA 82
           +KKAKSGGFES+GL   V+RG++ KGYRVPTPIQRK MPLIL+G D+ AMARTGSGKTAA
Sbjct: 43  KKKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAA 102

Query: 83  FLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMETQ 142
           FLVPM++RL++H+   G+RALILSPTRDLA QTLKF ++LGKFTDL+ISL+VGGDSME+Q
Sbjct: 103 FLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQ 162

Query: 143 FEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQL 202
           FEELA++PD+IIATPGRL+HHLAEV+D+ LRTVEYVVFDEAD LF +G  +QLH IL +L
Sbjct: 163 FEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKL 222

Query: 203 SENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEEKNAALL 262
           S+ RQTLLFSATLP  LA+FAKAGLRDPQ+VRLDLD KISPDLK+ FFTLRQEEK AALL
Sbjct: 223 SDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEEKLAALL 282

Query: 263 YLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARR 322
           YL+RE+IS+++Q++IFVST+HHVEFLN+LFREEG+EPS+ YG MDQ+AR IHIS+FRAR+
Sbjct: 283 YLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARK 342

Query: 323 TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLP 382
           TM LIVTDVAARG+DIPLLDNV+NWDFP KPK+FVHRVGR AR GR+GTA++FVTSED+ 
Sbjct: 343 TMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMA 402

Query: 383 NLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLASDRIR 442
            LLDLHLFLSKP+R APTEEE+L D EG+  KID A+A+GETVYGR PQT+IDL SD IR
Sbjct: 403 YLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIR 462

Query: 443 ETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKTALEGGELM 502
           E I+   DLI+L+K C+NAF +Y K++P+PS ESIRR KDLPREGLHPIF+  L   EL 
Sbjct: 463 EVINGCTDLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGLHPIFRDVLGSDELS 522

Query: 503 ALAFSERLKTFRPKQTILEAEGETSKSRHR 533
           ALAFSERLK+FRPKQTILEAEGE ++  ++
Sbjct: 523 ALAFSERLKSFRPKQTILEAEGEAARGSNQ 552

[Close]

BLAST of CSPI01G33440 vs. Swiss-Prot
Match: RH29_ORYSJ (DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica GN=Os08g0416100 PE=2 SV=2)

HSP 1 Score: 775.4 bits (2001), Expect = 4.1e-223
Identity = 375/510 (73.53%), Postives = 449/510 (88.04%), Query Frame = 1


Query: 23  QKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAA 82
           ++KAKSGGFES+GL   V+RG++ KGYRVPTPIQRK MPLIL+G D+ AMARTGSGKTAA
Sbjct: 43  KRKAKSGGFESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAA 102

Query: 83  FLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMETQ 142
           FLVPM++RL++H+   G+RALILSPTRDLA QTLKF ++LGKFTDL+ISL+VGGDSME+Q
Sbjct: 103 FLVPMIQRLRRHDAGAGIRALILSPTRDLATQTLKFAQQLGKFTDLKISLIVGGDSMESQ 162

Query: 143 FEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQL 202
           FEELA++PD+IIATPGRL+HHLAEV+D+ LRTVEYVVFDEAD LF +G  +QLH IL +L
Sbjct: 163 FEELAENPDIIIATPGRLVHHLAEVEDLNLRTVEYVVFDEADSLFSLGLIQQLHDILHKL 222

Query: 203 SENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEEKNAALL 262
           S+ RQTLLFSATLP  LA+FAKAGLRDPQ+VRLDLD KISPDLK+ FFTLRQEEK AALL
Sbjct: 223 SDTRQTLLFSATLPQALADFAKAGLRDPQIVRLDLDKKISPDLKLAFFTLRQEEKLAALL 282

Query: 263 YLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARR 322
           YL+RE+IS+++Q++IFVST+HHVEFLN+LFREEG+EPS+ YG MDQ+AR IHIS+FRAR+
Sbjct: 283 YLVRERISSEEQTIIFVSTKHHVEFLNILFREEGLEPSLSYGAMDQEARNIHISKFRARK 342

Query: 323 TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLP 382
           TM LIVTDVAARG+DIPLLDNV+NWDFP KPK+FVHRVGR AR GR+GTA++FVTSED+ 
Sbjct: 343 TMILIVTDVAARGLDIPLLDNVVNWDFPAKPKLFVHRVGRVARQGRSGTAYTFVTSEDMA 402

Query: 383 NLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLASDRIR 442
            LLDLHLFLSKP+R APTEEE+L D EG+  KID A+A+GETVYGR PQT+IDL SD I+
Sbjct: 403 YLLDLHLFLSKPLRPAPTEEELLKDMEGMNLKIDRALANGETVYGRFPQTIIDLVSDGIK 462

Query: 443 ETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLHPIFKTALEGGELM 502
           E I+   DLI+L+K C+NAF +Y K++P+PS ESIRR KDLPREGLHPIF+  L   EL 
Sbjct: 463 EVINGCTDLIALEKPCTNAFHLYLKTRPMPSTESIRRVKDLPREGLHPIFRDVLGSDELS 522

Query: 503 ALAFSERLKTFRPKQTILEAEGETSKSRHR 533
           ALAFSERLK+FRPKQTILEAEGE ++  ++
Sbjct: 523 ALAFSERLKSFRPKQTILEAEGEAARGSNQ 552

[Close]

BLAST of CSPI01G33440 vs. Swiss-Prot
Match: DDX54_MOUSE (ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1)

HSP 1 Score: 524.2 bits (1349), Expect = 1.6e-147
Identity = 270/506 (53.36%), Postives = 362/506 (71.54%), Query Frame = 1


Query: 19  REKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSG 78
           R + +KK KSGGF+S+GLS  VF+GI +KGY+VPTPIQRKT+P+IL G DVVAMARTGSG
Sbjct: 85  RAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSG 144

Query: 79  KTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDS 138
           KTA FL+PM ERLK    Q G RALILSPTR+LALQT+KFTKELGKFT L+ +L++GGD 
Sbjct: 145 KTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKELGKFTGLKTALILGGDK 204

Query: 139 METQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKI 198
           ME QF  L ++PD+IIATPGRL+H   E++ + L++VEYVVFDEAD LF+MGFAEQL +I
Sbjct: 205 MEDQFAALHENPDIIIATPGRLVHVAVEMN-LKLQSVEYVVFDEADRLFEMGFAEQLQEI 264

Query: 199 LAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEEKN 258
           + +L    QT+LFSATLP +L EFA+AGL +P L+RLD+D+K++  LK  F  +R++ K 
Sbjct: 265 IGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVREDTKA 324

Query: 259 AALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRF 318
           A LLYL++  +    Q+++FV+T+HH E+L  L   +G+  +  Y  +DQ ARKI++++F
Sbjct: 325 AVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKF 384

Query: 319 RARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTS 378
              +   LIVTD+AARG+DIPLLDNVIN+ FP K K+F+HRVGR ARAGR+GTA+S V  
Sbjct: 385 THNKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAP 444

Query: 379 EDLPNLLDLHLFLSKPIR-AAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLA 438
           +++P LLDLHLFL + +  A P EE  + D  G            + V GR+PQ+V+D  
Sbjct: 445 DEVPYLLDLHLFLGRSVTLARPCEEPSVADAVG-----------RDGVLGRVPQSVVDDE 504

Query: 439 SDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAK--DLPREGLHPIFKTA 498
              ++  + +S DL  L +  +NA + Y +S+P PS ESI+RAK  DL   GLHP+F + 
Sbjct: 505 DSSLQTAMGASLDLQGLHRVANNAQQQYVRSRPAPSPESIKRAKELDLAELGLHPLFSSC 564

Query: 499 LEGGELMALAFSERLKTFRPKQTILE 522
            E GEL  L   + +K +R + TI E
Sbjct: 565 FEEGELQRLRLVDSIKNYRTRTTIFE 578

[Close]

BLAST of CSPI01G33440 vs. Swiss-Prot
Match: DDX54_HUMAN (ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2)

HSP 1 Score: 518.1 bits (1333), Expect = 1.2e-145
Identity = 267/505 (52.87%), Postives = 359/505 (71.09%), Query Frame = 1


Query: 19  REKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSG 78
           R + +KK KSGGF+S+GLS  VF+GI +KGY+VPTPIQRKT+P+IL G DVVAMARTGSG
Sbjct: 86  RAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSG 145

Query: 79  KTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDS 138
           KTA FL+PM ERLK H  Q G RALILSPTR+LALQTLKFTKELGKFT L+ +L++GGD 
Sbjct: 146 KTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDR 205

Query: 139 METQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKI 198
           ME QF  L ++PD+IIATPGRL+H   E+  + L++VEYVVFDEAD LF+MGFAEQL +I
Sbjct: 206 MEDQFAALHENPDIIIATPGRLVHVAVEMS-LKLQSVEYVVFDEADRLFEMGFAEQLQEI 265

Query: 199 LAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEEKN 258
           +A+L    QT+LFSATLP +L EFA+AGL +P L+RLD+DTK++  LK  FF +R++ K 
Sbjct: 266 IARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKA 325

Query: 259 AALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRF 318
           A LL+L+   +    Q+++FV+T+HH E+L  L   + +  +  Y  +D  ARKI++++F
Sbjct: 326 AVLLHLLHNVVRPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKF 385

Query: 319 RARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTS 378
              +   LIVTD+AARG+DIPLLDNVIN+ FP K K+F+HRVGR ARAGR+GTA+S V  
Sbjct: 386 TLGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAP 445

Query: 379 EDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRLPQTVIDLAS 438
           +++P LLDLHLFL + +  A   +E               +A  + + GR+PQ+V+D   
Sbjct: 446 DEIPYLLDLHLFLGRSLTLARPLKE------------PSGVAGVDGMLGRVPQSVVDEED 505

Query: 439 DRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAK--DLPREGLHPIFKTAL 498
             ++ T+++S +L  L +   NA + Y +S+P PS ESI+RAK  DL   GLHP+F +  
Sbjct: 506 SGLQSTLEASLELRGLARVADNAQQQYVRSRPAPSPESIKRAKEMDLVGLGLHPLFSSRF 565

Query: 499 EGGELMALAFSERLKTFRPKQTILE 522
           E  EL  L   + +K +R + TI E
Sbjct: 566 EEEELQRLRLVDSIKNYRSRATIFE 577

[Close]

BLAST of CSPI01G33440 vs. TrEMBL
Match: A0A0A0M3G2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G688130 PE=4 SV=1)

HSP 1 Score: 1035.8 bits (2677), Expect = 1.9e-299
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 1


Query: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60
           MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180
           ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF
Sbjct: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180

Query: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240
           DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK
Sbjct: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240

Query: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300
           ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS
Sbjct: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300

Query: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360
           VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
Sbjct: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360

Query: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420
           GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA
Sbjct: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420

Query: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480
           SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA
Sbjct: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480

Query: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ
Sbjct: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 533

[Close]

BLAST of CSPI01G33440 vs. TrEMBL
Match: A0A067GXY7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 1.1e-264
Identity = 460/530 (86.79%), Postives = 501/530 (94.53%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQVCLFIL 540
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H QV  + +
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQVTSYFM 533

[Close]

BLAST of CSPI01G33440 vs. TrEMBL
Match: A0A067H761_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 7.4e-264
Identity = 459/524 (87.60%), Postives = 498/524 (95.04%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H Q
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQ 527

[Close]

BLAST of CSPI01G33440 vs. TrEMBL
Match: A0A067H7J7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 7.4e-264
Identity = 459/524 (87.60%), Postives = 498/524 (95.04%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H Q
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQ 527

[Close]

BLAST of CSPI01G33440 vs. TrEMBL
Match: A0A067GV95_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1)

HSP 1 Score: 917.5 bits (2370), Expect = 7.4e-264
Identity = 459/524 (87.60%), Postives = 498/524 (95.04%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H Q
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQ 527

[Close]

BLAST of CSPI01G33440 vs. TAIR10
Match: AT1G77030.1 (AT1G77030.1 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases)

HSP 1 Score: 818.1 bits (2112), Expect = 3.1e-237
Identity = 411/522 (78.74%), Postives = 462/522 (88.51%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSS  EL R+EKQ+KK KSGGFESL L  NVF  IK+KGY+VPTPIQRKTMPLILSG DV
Sbjct: 9   VSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDV 68

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFL+PMLE+LKQH PQGGVRALILSPTRDLA QTLKFTKELGKFTDLR
Sbjct: 69  VAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLR 128

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           +SLLVGGDSME QFEEL + PDVIIATPGRLMH L+EVDDMTLRTVEYVVFDEAD LF M
Sbjct: 129 VSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGM 188

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLH+IL QLSENRQTLLFSATLPS LAEFAKAGLR+PQLVRLD++ KISPDLK+ F
Sbjct: 189 GFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSF 248

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
            T+R EEK +ALLYL+RE IS+DQQ+LIFVST+HHVEF+N LF+ E IEPSVCYG+MDQD
Sbjct: 249 LTVRPEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQD 308

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TM LIVTD+AARGIDIPLLDNVINWDFPP+PKIFVHRVGRAARAGRT
Sbjct: 309 ARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRT 368

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           G A+SFVT ED+P +LDLHLFLSKP+R APTE+EVL + E V +K   AI SG TVYGR 
Sbjct: 369 GCAYSFVTPEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRF 428

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQ  IDL  +R RE IDSSA+L SL++T + AFR+YSK+KP PSKESIRRAKDLPREGLH
Sbjct: 429 PQKTIDLIFNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGLH 488

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRH 532
           PIF++ +E GEL A++F +++K FRPKQTILEAEGE +KS+H
Sbjct: 489 PIFRSIIETGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKH 530

[Close]

BLAST of CSPI01G33440 vs. TAIR10
Match: AT5G60990.1 (AT5G60990.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 243.0 bits (619), Expect = 4.1e-64
Identity = 140/388 (36.08%), Postives = 223/388 (57.47%), Query Frame = 1


Query: 31  FESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLER 90
           F  LG+   + +  +R G++ P+ IQ + +P  L G DV+ +A+TGSGKT AF +P+L+ 
Sbjct: 11  FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70

Query: 91  LKQH----EPQGGVR------ALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSME 150
           L ++    EP+ G R      A +LSPTR+LA+Q  +  + LG    LR ++LVGG    
Sbjct: 71  LLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRM 130

Query: 151 TQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILA 210
            Q   L + P VI+ATPGRL  H+++    +L++++Y+V DEAD L +  F + L++IL 
Sbjct: 131 QQTIALGKRPHVIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILE 190

Query: 211 QLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKIS--PDLKVVFFTLRQEEKN 270
           ++   R+T LFSAT+   + +  +A LR+P  V+++  +K S    LK  +  +  + K+
Sbjct: 191 EIPLERKTFLFSATMTKKVRKLQRACLRNP--VKIEAASKYSTVDTLKQQYRFVAAKYKD 250

Query: 271 AALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRF 330
             L+Y++ E    +  S+IF  T     FL ++ R  G       G+M Q  R   +++F
Sbjct: 251 CYLVYILSEM--PESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 310

Query: 331 RARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTS 390
           +A     L+ TDVA+RG+DIP +D VIN+D P   K ++HRVGR ARAGR+G   S V  
Sbjct: 311 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 370

Query: 391 EDLPNLLDLHLFLSKPIRAAPTEEEVLL 407
            +L   + +   + K +   P EE+ +L
Sbjct: 371 YELEWYIQIEKLIGKKLPEYPAEEDEVL 394

[Close]

BLAST of CSPI01G33440 vs. TAIR10
Match: AT4G16630.1 (AT4G16630.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-60
Identity = 138/354 (38.98%), Postives = 195/354 (55.08%), Query Frame = 1


Query: 31  FESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLER 90
           F  L LS  + R  +  GY+ PTPIQ   +PL L+G D+ A A TGSGKTAAF +P LER
Sbjct: 169 FMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLER 228

Query: 91  LKQHEPQG-GVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMETQFEELAQS 150
           L     +    R LIL+PTR+LA+Q     + L +FTD++  L+VGG S+  Q   L   
Sbjct: 229 LLFRPKRVFATRVLILTPTRELAVQIHSMIQNLAQFTDIKCGLIVGGLSVREQEVVLRSM 288

Query: 151 PDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQLSENRQTL 210
           PD+++ATPGR++ HL     + L  +  ++ DEAD L   GFA ++ +++    + RQT+
Sbjct: 289 PDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLLQTGFATEITELVRLCPKRRQTM 348

Query: 211 LFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLK---VVFFTLRQEEKNAALLYLIR 270
           LFSAT+   + E  K  L  P  +  D   +  P L    V     R+  + A LL L  
Sbjct: 349 LFSATMTEEVKELVKLSLNKPLRLSADPSARRPPGLTEEVVRIRRTREANQEAVLLSLCT 408

Query: 271 EQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARRTMFL 330
               +  + +IF  T+     L +LF   G++ +  +G + Q  R   +  FR +   FL
Sbjct: 409 RTFKS--KVIIFSGTKQAAHRLKILFGLAGLKAAELHGNLTQAQRLDSLELFRKQEVDFL 468

Query: 331 IVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSED 381
           I TDVAARG+DI  +  VIN+  P +   +VHRVGR ARAGR G A +FVT  D
Sbjct: 469 IATDVAARGLDIIGVQTVINYACPREIDSYVHRVGRTARAGREGYAVTFVTDSD 520

[Close]

BLAST of CSPI01G33440 vs. TAIR10
Match: AT1G16280.1 (AT1G16280.1 RNA helicase 36)

HSP 1 Score: 229.9 bits (585), Expect = 3.6e-60
Identity = 146/384 (38.02%), Postives = 215/384 (55.99%), Query Frame = 1


Query: 31  FESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLER 90
           FE LGL+       K  G R PTP+Q   +P IL+G DV+ +A+TGSGKTAAF +P+L R
Sbjct: 60  FEGLGLAEWAVETCKELGMRKPTPVQTHCVPKILAGRDVLGLAQTGSGKTAAFALPILHR 119

Query: 91  LKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMETQFEELAQSP 150
           L   E   GV AL+++PTR+LA Q  +  K LG   +LR S++VGG  M TQ   L   P
Sbjct: 120 LA--EDPYGVFALVVTPTRELAFQLAEQFKALGSCLNLRCSVIVGGMDMLTQTMSLVSRP 179

Query: 151 DVIIATPGR---LMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQLSENRQ 210
            ++I TPGR   L+ +  +V  +  RT +++V DEAD + D+GF ++L  I   L ++RQ
Sbjct: 180 HIVITTPGRIKVLLENNPDVPPVFSRT-KFLVLDEADRVLDVGFQDELRTIFQCLPKSRQ 239

Query: 211 TLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVFFTLRQEEKNAALLYLI-- 270
           TLLFSAT+ S L    +               K    L   F     E+K+A  LYL+  
Sbjct: 240 TLLFSATMTSNLQALLEHSSNKAYFYEAYEGLKTVDTLTQQFIF---EDKDAKELYLVHI 299

Query: 271 --REQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARRT 330
             + +    + ++IFVST    + L+++  E  +E    +    Q  R   +S+F++ + 
Sbjct: 300 LSQMEDKGIRSAMIFVSTCRTCQRLSLMLDELEVENIAMHSLNSQSMRLSALSKFKSGKV 359

Query: 331 MFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLPN 390
             L+ TDVA+RG+DIP +D VIN+D P  P+ +VHRVGR ARAGR G A S +T  D+  
Sbjct: 360 PILLATDVASRGLDIPTVDLVINYDIPRDPRDYVHRVGRTARAGRGGLAVSIITETDVKL 419

Query: 391 LLDLHLFLSKPIRAAPTEEEVLLD 408
           +  +   + K  +  P  ++V+ D
Sbjct: 420 IHKIEEEVGK--KMEPYNKKVITD 435

[Close]

BLAST of CSPI01G33440 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 221.5 bits (563), Expect = 1.3e-57
Identity = 131/384 (34.11%), Postives = 207/384 (53.91%), Query Frame = 1


Query: 31  FESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADVVAMARTGSGKTAAFLVPMLER 90
           F+      N+   I + G+  PTPIQ +  P+ L G D++ +A TGSGKT A+L+P L  
Sbjct: 167 FQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALVH 226

Query: 91  LKQHEPQG---GVRALILSPTRDLALQTLKFTKELGKFTDLRISLLVGGDSMETQFEELA 150
           +      G   G   LIL+PTR+LA+Q  + +++ G  + +R + + GG     Q  +L 
Sbjct: 227 VSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDLR 286

Query: 151 QSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDMGFAEQLHKILAQLSENRQ 210
           +  +++IATPGRL+  L E     L+ V Y+V DEAD + DMGF  Q+ KI++Q+  +RQ
Sbjct: 287 RGVEIVIATPGRLIDML-ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQ 346

Query: 211 TLLFSATLPSVLAEFAKAGLRDPQLVRL-DLDTKISPDLKVVFFTLRQEEKNAALLYLIR 270
           TLL+SAT P  +   A+  LRDP    +   D K +  +  V   +   EK   LL L++
Sbjct: 347 TLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLK 406

Query: 271 EQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQDARKIHISRFRARRTMFL 330
            Q+    + LIFV T+   + +    R +G      +G+  Q  R   ++ F++ R+  +
Sbjct: 407 -QLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIM 466

Query: 331 IVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRTGTAFSFVTSEDLPNLLD 390
             TDVAARG+D+  +  V+N+DFP   + ++HR+GR  RAG  G AF+F T ++     +
Sbjct: 467 TATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFARE 526

Query: 391 LHLFLSKPIRAAPTEEEVLLDKEG 411
           L   L +  +  P     L+   G
Sbjct: 527 LVKILQEAGQVVPPTLSALVRSSG 548

[Close]

BLAST of CSPI01G33440 vs. NCBI nr
Match: gi|449449653|ref|XP_004142579.1| (PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucumis sativus])

HSP 1 Score: 1035.8 bits (2677), Expect = 2.7e-299
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 1


Query: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60
           MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180
           ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF
Sbjct: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180

Query: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240
           DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK
Sbjct: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240

Query: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300
           ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS
Sbjct: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300

Query: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360
           VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
Sbjct: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360

Query: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420
           GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA
Sbjct: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420

Query: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480
           SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA
Sbjct: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480

Query: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ
Sbjct: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 533

[Close]

BLAST of CSPI01G33440 vs. NCBI nr
Match: gi|778664325|ref|XP_011660272.1| (PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucumis sativus])

HSP 1 Score: 1035.8 bits (2677), Expect = 2.7e-299
Identity = 533/533 (100.00%), Postives = 533/533 (100.00%), Query Frame = 1


Query: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60
           MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180
           ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF
Sbjct: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180

Query: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240
           DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK
Sbjct: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240

Query: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300
           ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS
Sbjct: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300

Query: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360
           VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
Sbjct: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360

Query: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420
           GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA
Sbjct: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420

Query: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480
           SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA
Sbjct: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480

Query: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ
Sbjct: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 533

[Close]

BLAST of CSPI01G33440 vs. NCBI nr
Match: gi|659107438|ref|XP_008453672.1| (PREDICTED: LOW QUALITY PROTEIN: putative DEAD-box ATP-dependent RNA helicase 29 [Cucumis melo])

HSP 1 Score: 1014.2 bits (2621), Expect = 8.3e-293
Identity = 520/533 (97.56%), Postives = 527/533 (98.87%), Query Frame = 1


Query: 1   MGKQDEPLHVSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTM 60
           MGKQDE LHVSSKAELKR+EKQQKKAKSGGFESLGLS NVFRGIKRKGYRVPTPIQRKTM
Sbjct: 1   MGKQDELLHVSSKAELKRKEKQQKKAKSGGFESLGLSPNVFRGIKRKGYRVPTPIQRKTM 60

Query: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120
           PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK
Sbjct: 61  PLILSGADVVAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTK 120

Query: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVF 180
           ELGKFTDLRISLLVGGDSMETQFEELAQSPD+IIATPGRLMHHLAEVDDMTLRTVEYVVF
Sbjct: 121 ELGKFTDLRISLLVGGDSMETQFEELAQSPDIIIATPGRLMHHLAEVDDMTLRTVEYVVF 180

Query: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240
           DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK
Sbjct: 181 DEADCLFDMGFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTK 240

Query: 241 ISPDLKVVFFTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPS 300
           ISPDLK+V FTLRQEEKNAALLYLIRE+ISADQQSLIFVSTRHHVEFLNVLFREEG+EPS
Sbjct: 241 ISPDLKLVXFTLRQEEKNAALLYLIREKISADQQSLIFVSTRHHVEFLNVLFREEGVEPS 300

Query: 301 VCYGEMDQDARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360
           VCYGEMDQDARKIHISRFR ++TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV
Sbjct: 301 VCYGEMDQDARKIHISRFRXKKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRV 360

Query: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420
           GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA
Sbjct: 361 GRAARAGRTGTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIA 420

Query: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480
           SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA
Sbjct: 421 SGETVYGRLPQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRA 480

Query: 481 KDLPREGLHPIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           KDLPREGLHPIFK ALEGGELMALAFSERLKTFRPKQTILEAEGET KSRHRQ
Sbjct: 481 KDLPREGLHPIFKNALEGGELMALAFSERLKTFRPKQTILEAEGETIKSRHRQ 533

[Close]

BLAST of CSPI01G33440 vs. NCBI nr
Match: gi|641864870|gb|KDO83555.1| (hypothetical protein CISIN_1g003924mg [Citrus sinensis])

HSP 1 Score: 920.2 bits (2377), Expect = 1.6e-264
Identity = 460/530 (86.79%), Postives = 501/530 (94.53%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQVCLFIL 540
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H QV  + +
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQVTSYFM 533

[Close]

BLAST of CSPI01G33440 vs. NCBI nr
Match: gi|641864869|gb|KDO83554.1| (hypothetical protein CISIN_1g003924mg [Citrus sinensis])

HSP 1 Score: 917.5 bits (2370), Expect = 1.1e-263
Identity = 459/524 (87.60%), Postives = 498/524 (95.04%), Query Frame = 1


Query: 10  VSSKAELKRREKQQKKAKSGGFESLGLSANVFRGIKRKGYRVPTPIQRKTMPLILSGADV 69
           VSSKAELKRREKQ+KK+KSGGFESL LS NVFR IKRKGY+VPTPIQRKTMPLILSGADV
Sbjct: 4   VSSKAELKRREKQKKKSKSGGFESLNLSPNVFRAIKRKGYKVPTPIQRKTMPLILSGADV 63

Query: 70  VAMARTGSGKTAAFLVPMLERLKQHEPQGGVRALILSPTRDLALQTLKFTKELGKFTDLR 129
           VAMARTGSGKTAAFLVPML+RL QH PQGGVRALILSPTRDLALQTLKFTKELG++TDLR
Sbjct: 64  VAMARTGSGKTAAFLVPMLQRLNQHVPQGGVRALILSPTRDLALQTLKFTKELGRYTDLR 123

Query: 130 ISLLVGGDSMETQFEELAQSPDVIIATPGRLMHHLAEVDDMTLRTVEYVVFDEADCLFDM 189
           ISLLVGGDSME+QFEELAQ+PD+IIATPGRLMHHL+EV+DM+L++VEYVVFDEADCLF M
Sbjct: 124 ISLLVGGDSMESQFEELAQNPDIIIATPGRLMHHLSEVEDMSLKSVEYVVFDEADCLFGM 183

Query: 190 GFAEQLHKILAQLSENRQTLLFSATLPSVLAEFAKAGLRDPQLVRLDLDTKISPDLKVVF 249
           GFAEQLHKIL QLSENRQTLLFSATLPS LAEFAKAGLRDP LVRLD+DTKISPDLK+ F
Sbjct: 184 GFAEQLHKILGQLSENRQTLLFSATLPSALAEFAKAGLRDPHLVRLDVDTKISPDLKLAF 243

Query: 250 FTLRQEEKNAALLYLIREQISADQQSLIFVSTRHHVEFLNVLFREEGIEPSVCYGEMDQD 309
           FTLRQEEK+AALLY+IRE IS+DQQ+LIFVST+HHVEFLNVLFREEG+EPSVCYG+MDQD
Sbjct: 244 FTLRQEEKHAALLYMIREHISSDQQTLIFVSTKHHVEFLNVLFREEGLEPSVCYGDMDQD 303

Query: 310 ARKIHISRFRARRTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 369
           ARKIH+SRFRAR+TMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT
Sbjct: 304 ARKIHVSRFRARKTMFLIVTDVAARGIDIPLLDNVINWDFPPKPKIFVHRVGRAARAGRT 363

Query: 370 GTAFSFVTSEDLPNLLDLHLFLSKPIRAAPTEEEVLLDKEGVFSKIDHAIASGETVYGRL 429
           GTAFSFVTSED+  LLDLHLFLSKPIRAAP+EEEVLLD +GV SKID AIA+GET+YGR 
Sbjct: 364 GTAFSFVTSEDMAYLLDLHLFLSKPIRAAPSEEEVLLDMDGVMSKIDQAIANGETIYGRF 423

Query: 430 PQTVIDLASDRIRETIDSSADLISLQKTCSNAFRMYSKSKPLPSKESIRRAKDLPREGLH 489
           PQTVIDL SDR+RE IDSSADL SLQ+TC+NAFR+YSK+KPLPSKESIRR KDLPREGLH
Sbjct: 424 PQTVIDLVSDRVREIIDSSADLNSLQRTCTNAFRLYSKTKPLPSKESIRRGKDLPREGLH 483

Query: 490 PIFKTALEGGELMALAFSERLKTFRPKQTILEAEGETSKSRHRQ 534
           P+FK  LEGGELMALAFSERLK FRPKQTILEAEGE ++S+H Q
Sbjct: 484 PMFKNVLEGGELMALAFSERLKAFRPKQTILEAEGEAARSKHLQ 527

The following BLAST results are available for this feature:

BLAST of CSPI01G33440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH29_ARATH	5.5e-236	78.74	Putative DEAD-box ATP-dependent RNA helicase 29 OS=Arabidopsis thaliana GN=RH29 ...	[more]
RH29_ORYSI	8.2e-224	73.92	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. indica GN=OsI_0282...	[more]
RH29_ORYSJ	4.1e-223	73.53	DEAD-box ATP-dependent RNA helicase 29 OS=Oryza sativa subsp. japonica GN=Os08g0...	[more]
DDX54_MOUSE	1.6e-147	53.36	ATP-dependent RNA helicase DDX54 OS=Mus musculus GN=Ddx54 PE=1 SV=1	[more]
DDX54_HUMAN	1.2e-145	52.87	ATP-dependent RNA helicase DDX54 OS=Homo sapiens GN=DDX54 PE=1 SV=2	[more]

BLAST of CSPI01G33440 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M3G2_CUCSA	1.9e-299	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G688130 PE=4 SV=1	[more]
A0A067GXY7_CITSI	1.1e-264	86.79	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1	[more]
A0A067H761_CITSI	7.4e-264	87.60	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1	[more]
A0A067H7J7_CITSI	7.4e-264	87.60	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1	[more]
A0A067GV95_CITSI	7.4e-264	87.60	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g003924mg PE=4 SV=1	[more]

BLAST of CSPI01G33440 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G77030.1	3.1e-237	78.74	hydrolases, acting on acid anhydrides, in phosphorus-containing anhy...	[more]
AT5G60990.1	4.1e-64	36.08	DEA(D/H)-box RNA helicase family protein	[more]
AT4G16630.1	2.1e-60	38.98	DEA(D/H)-box RNA helicase family protein	[more]
AT1G16280.1	3.6e-60	38.02	RNA helicase 36	[more]
AT5G63120.2	1.3e-57	34.11	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of CSPI01G33440 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449449653\|ref\|XP_004142579.1\|	2.7e-299	100.00	PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29 isoform X2 [Cucumis s...	[more]
gi\|778664325\|ref\|XP_011660272.1\|	2.7e-299	100.00	PREDICTED: putative DEAD-box ATP-dependent RNA helicase 29 isoform X1 [Cucumis s...	[more]
gi\|659107438\|ref\|XP_008453672.1\|	8.3e-293	97.56	PREDICTED: LOW QUALITY PROTEIN: putative DEAD-box ATP-dependent RNA helicase 29 ...	[more]
gi\|641864870\|gb\|KDO83555.1\|	1.6e-264	86.79	hypothetical protein CISIN_1g003924mg [Citrus sinensis]	[more]
gi\|641864869\|gb\|KDO83554.1\|	1.1e-263	87.60	hypothetical protein CISIN_1g003924mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001650	Helicase_C
IPR011545	DEAD/DEAH_box_helicase_dom
IPR014001	Helicase_ATP-bd
IPR014014	RNA_helicase_DEAD_Q_motif
IPR027417	P-loop_NTPase

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G33440.1	CSPI01G33440.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 257..367 score: 7.2
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 286..367 score: 4.7
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 244..406 score: 18
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 53..219 score: 4.0
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 48..248 score: 1.2
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 60..233 score: 31
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 29..57 score: 10
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 17..236 score: 9.2E-75coord: 237..402 score: 1.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 99..384 score: 1.47
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 15..450 score: 8.7E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G33440	Watermelon (97103) v2	cpiwmbB083
CSPI01G33440	Cucumber (Gy14) v1	cgycpiB440
CSPI01G33440	Cucumber (Gy14) v1	cgycpiB441
CSPI01G33440	Cucurbita maxima (Rimu)	cmacpiB069
CSPI01G33440	Cucurbita maxima (Rimu)	cmacpiB090
CSPI01G33440	Cucurbita moschata (Rifu)	cmocpiB063
CSPI01G33440	Cucurbita moschata (Rifu)	cmocpiB083
CSPI01G33440	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G33440	Watermelon (Charleston Gray)	cpiwcgB081
CSPI01G33440	Watermelon (Charleston Gray)	cpiwcgB087
CSPI01G33440	Cucurbita pepo (Zucchini)	cpecpiB644
CSPI01G33440	Cucurbita pepo (Zucchini)	cpecpiB703
CSPI01G33440	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G33440	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G33440	Silver-seed gourd	carcpiB0948
CSPI01G33440	Cucumber (Chinese Long) v3	cpicucB000