CSPI01G32870 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G32870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionDUF639 family protein
LocationChr1 : 27721313 .. 27725732 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGCTTGACTGGGCAGAAAATGCAGAGAATATTTAAAGCCCTTGTGCATGAATCTGTTTACAACGATGCTCGCAGTTTGATAGAGTATTGCTGTTTTAGATTCTTGTCAAGGGACAGCTCAAATATTCATCCTTCACTCAGTGTAAGTACTTCTTGCTTCTTTATATTTTCTAATAACAGAAAATTTTAGCAGCAATGCAACTGGAATTTGTTTGCTCTTGGGTTTTTATGATGTTCTTTTGATGTGCTCTTTCTGATCTCCTATCTGGATATCCTTTTCAAGTTTTATGTTTAATTTGGTTTTCATTTTACTCTTCCATTCTATCTTTTTTCTTCTCTTCACTCCATCGTGTAGTTTGCATTTGGGGTATTGGTTTCTTTTCACTTTGTTAAAAGCGGTAAAGAAAATAGACACTGAGTTACGTGGAAACCCGAGTACTAGGAGAAAAACCCCGATATGACTTTCTTATTAATTTTTCATATTAACAAAAGATACAAAGGAAAAAATAAATAGACAACTAGCTTATGCCCTTGTGTATTTATGGAAAGCTTACCATAAATCTTTTTTCCTTTTTCCTTATGCCCTTGTGTATTCTATTTAATCTCTCACTATACCTTTGATAGTTTGTAAATCATCAGAAAATAATAAGGACAAAATATCGTAGTTTTTCTCCCGGTACTCGAGTTTCCACGTAAATTGGTGTGTTGTTCTTTGTCTCTACTTTTAATATGGTATCAGAGCGGGACATTGAATACACCCTATAAACACTAGAAGACACAATCAATGATGGAAATCAAATAGAGGAGATAGCCACAAGTTTTAGTGCCGCCGCTGATGCTTGGATCTGTGCTGACATGGACGAATGGTTCCGCCGCCTTCAAACGACTTTGGAAAATGTGATCTAGTTAAATTTGTAGTTGTTTGCGTCGCCGCTGGAGCTACACGTGTCATTCCTTTCTCCTCAAACAACGCCGACCTTTCCAACTGTGCAACCCTCTCCTTCATCTGCGGCCTATACTGCTCCCAATGCCCCGATTTATGTACTGCCTCCTAATTCCAGTCGGCCACCATCGCTTTTGCTGTTAAATCTATATGCCTTGCCACCCACAAACCTTAGTTATCAACTCTATGTTAAGAATCCTCAAATTCACTCAATATTTGAGGTTGGTGAATCTTCGGCACATTCCAATCCTAATGTGCAGGCTTCCTTGGGATTAACTCAAGAGCAATTGGAAGGGCTTCAACAACATATTGCAGCAATTGAGGCTACCTTAGGGATGACATCCTATACTCTTGTACCGATTATTCTGAGAATCTGGTAACCTCATTCCCTACTTTATCCTCTCCTTATATGATTAATACTGTGGCTCCGTCTATAGGATATCATGTTTTAGAAAAAAAGTTGAATGACAATAACTATTTCTCATGGTCTCAATTAGTCAAGATGGATCTTGAAGGACAAAATAAATTTAGCTTTCTGACAGGGGAAATACCTCGCCCTCCACCAGGCGACCCACAGGAACGATACTGAAAGGCAGAGGACGCTATTCTTCAATCCATTCTGATTAACAATATGGAACCCTAGATTGGCAAACCATTACTATTTTCTGCAACAGCCAAAGATATTTGGGAAATGACCTATACACTTTACTCCAAATATCAGAATGCCTTTTGCCTATACATATTGAGGAAGCAGGTTCATGGGTGCAAGCAAGGAACCATGGATGTCACATCCTTTTTTAATAAGCTTTCTCTTACCTGGCAGGAAATGGACTTATGCAGAGAACTAGTCTGGAGTAGTCCTAGTGACGGTTTGTAGTACTCTAGAATTGAAGAGATTGACAGGATTTATGGCTTTCTTGCTGGTCTTAATCCTAAGTTTGATGTAGTTTGAAGGCTATATTAGGCTAGAGGCTGATTCCCTCCTTGATGGAAATCTGTTTTGAAATCTGCCTCGAGGATGATCGCACAAGTGCTATGAGTTTTTTTGCAACTCTTGCCACTAACTTTGCTGCCTTTAGTGCTGGTTCTCAAATCAGGATAATGATAAAAATAATGGAAAATCTATCCTTGTTTTTTAGCACTACAAGAAACAATGGCACACCATGGATCAATGTTGGAAACTCCACGATTGTCCCCAGAAGGTAAGAAACGGTCCTCCAACGAGAAACATAACTCAGAAGGTGTCCACGTTAGTGAGACTACCACTGCCAACACTTTTCAGTCAACTAGCCCTACTGCAAGCCAGACCAAGACTCTTACTCTGGGTGCCATTGCTCAGTCAGGTATGCTTCAGTCCTTTAGGCTTATTAGTGTTGATGGGAATAATCCCTGGATTTTAGACTGAGGGGCTACAGATCATTTGACAGGTTCTTTAGAGCACTTTATTTCTCATGTCCTTTGTGTCTGTAATGAAAAAATCCGAATAGCTGATGACTCTCTAGCTCCGAATGCTGGCAAAGAACAAATAGTCCCCTTTGATGGTCTCGCTCTCTAGAATGTTTTGTATGTGCCTAAACTGTCTTACAACTTGTTATCTATAAGCAAGATCACTCATGAGCTGCATTGTAAAGCAATCTTCTTACCTGAATCTGTTTGATTTCAGGACATGAGCTCGGAGAGGACAATTGGCACTGCTCGACATAGTGGGAGACTTTACATCCTTGATGATGATACCTCTAGTAGTAGTATCTCTAGGGCTAGTTTATTGTGTTCCTATTTTAGCACTTTTGAACATGATTGTAGGTCCTTTTAATTGACTGTGTTTTTGCTTCTAATTGTTGGTTTTTCCTTCTCCAAACATTCAACATTTCTTGGGTTTTTTTTATCAAGGTTTTAAGAACAATGTGACTCAAATTCTTGTCGGTCCAGCCTTGAAGAAGAAACCAAAGTGGGTAAATGCAGTAAAAGCTCTCTTAGTTGAAATCTGGTTTGAAAGAAACCAAAGATTTTTCCATGATAAACCTTCAACTTAGATGGAACATTATGATTCTGTTCGGTTGAGCGCATCCTCATGGTGTTCACCATCCAAAAATTTTCAAGATTACTCTTCGCAGGAAATTTTGTTAAATTAGCTAGCCTTTATAGCCGGTTTTGAAGTCCTTGATCATTATATCTTCAGGATCAGCCTTACGCATCAACCAGTTTTCTGCTCAATCAAGAATTATTCTTCTTTGTTCCTGGCTGCCGCCTTTGTTTTTGGACAGATTATGAATCTTTAGTTATGGCCTTGTATTTGTGGCTCTTTTCTTTGCTTTGTTTTAATCTTGTATTGGGAATAGGATCTTAGTTTAAGGGTTTTATTTTCGTTTACGGGATGTGATGTTGGCGCTATGGGGGTGTCAACCTAGTTGAGATACCCGGATGCGCCTACTGATCTTTCCCCCTTATTGCTCTTTGTAGAGATACCCGGGTGCGCCTACTGATCTTCCCCCCTTATTGCTTTTTGTATAACTCATGTACATTGAGCTTTGTCTCTTTTTTTTTTTTTATATATTAATGATAGTGAGACTCGTTTTCTTTTCAAAAACATGATTGTAGGTTGTGACATTTTTGGTTGGGCCGCCCAAACTTTAATTATATGAAATATCCGTTTCCCTATCTCTTTCTAAAATTAATGTCTCCTCTCTATCTTGTGATGTGCGTATCCGGGCTAACAACATTGGGTTTCATTTCCCTCACAACCATACAAACCCACACAACTGTTTACCCTTATCCATAGTGACGTTTGGGGTCCTTCCAAGGTCACCACCTCATCTAGAAAATGGTGGTTTGTAACTTTCATTGATGATCATACCCGTCTTATCTGGGTCTACCTTATCACTGATAATTCTGAGGTATCCTCTATTTTCCAAAAATTCTATCACACAATTTGCTCTTCCGTTCACACTATTTTGTAACTTTTCCTTGCATAAATGATAACTTTTAATTCCTTAGAAAGAAATTTTCATAATTTAATGATTAGTCGGATATTGATCTCTCTGAATTAATATATATGTAAAACCCAACAACATGCTATAAAATCTTTAACCCATACCAATTGACATAATTTAAAATAAAAAGAAAAAATTGCAGAAGGAACCAATAAACTTTCTGCGTTAATAGGGATACAACCTCCCAATGAATGACGTCGCCAAGGAAATTAACCAAAGACAAAAAGAATTGAACAACTCTTTTGCTTTTTTAGTATATGTTGATGACCAGCAAAAGAATGCTTTTCTTTTCTTTTTCTTTTTATATCAACAAATTCTGTTTATTTCTGCAGGAACCCACGTTTCAGAGATTGATATTCATAACAATGCTTGCTTGGGAAAATCCATATCATGAGCATGCTAATGTTTCAGAGGAAATTTCTTTTCAGGTTATTAATGCAATATTAAGTTTTGTGCCATCGTATGAATTTCCTTGTGAATAA

mRNA sequence

ATGAATGGCTTGACTGGGCAGAAAATGCAGAGAATATTTAAAGCCCTTGTGCATGAATCTGTTTACAACGATGCTCGCAGTTTGATAGAGTATTGCTGTTTTAGATTCTTGTCAAGGGACAGCTCAAATATTCATCCTTCACTCAGTGAACCCACGTTTCAGAGATTGATATTCATAACAATGCTTGCTTGGGAAAATCCATATCATGAGCATGCTAATGTTTCAGAGGAAATTTCTTTTCAGGTTATTAATGCAATATTAAGTTTTGTGCCATCGTATGAATTTCCTTGTGAATAA

Coding sequence (CDS)

ATGAATGGCTTGACTGGGCAGAAAATGCAGAGAATATTTAAAGCCCTTGTGCATGAATCTGTTTACAACGATGCTCGCAGTTTGATAGAGTATTGCTGTTTTAGATTCTTGTCAAGGGACAGCTCAAATATTCATCCTTCACTCAGTGAACCCACGTTTCAGAGATTGATATTCATAACAATGCTTGCTTGGGAAAATCCATATCATGAGCATGCTAATGTTTCAGAGGAAATTTCTTTTCAGGTTATTAATGCAATATTAAGTTTTGTGCCATCGTATGAATTTCCTTGTGAATAA
Homology
[Close]
BLAST of CSPI01G32870 vs. TrEMBL
Match: A0A0A0M096_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665360 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.3e-51
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
          MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT
Sbjct: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60

Query: 61 MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE 99
          MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE
Sbjct: 61 MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE 98

[Close]
BLAST of CSPI01G32870 vs. TrEMBL
Match: M5XJZ8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002078mg PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-31
Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTGQKMQRIFKALV ES YNDAR+L+EYCCFRFLSRD+S+IHPSL EP FQRLIFIT
Sbjct: 34  MNGLTGQKMQRIFKALVSESTYNDARNLVEYCCFRFLSRDNSDIHPSLKEPAFQRLIFIT 93

Query: 61  MLAWENPYHEH-ANVSEEISFQ 82
           MLAWENPY E  AN SE+ SFQ
Sbjct: 94  MLAWENPYQEDLANGSEKASFQ 115

[Close]
BLAST of CSPI01G32870 vs. TrEMBL
Match: A5BC42_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041585 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-28
Identity = 65/88 (73.86%), Postives = 76/88 (86.36%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTG+KMQ+IF+ALV E+VYNDAR+L+EYCCFRFLSRDSS+IHP L EP FQRLIFIT
Sbjct: 135 MNGLTGEKMQKIFRALVPETVYNDARNLVEYCCFRFLSRDSSDIHPCLKEPAFQRLIFIT 194

Query: 61  MLAWENPYHEHANVS-----EEISFQVI 84
           MLAWENPY+E AN S     E+ SF++I
Sbjct: 195 MLAWENPYYE-ANDSNAIGLEKASFKII 221

[Close]
BLAST of CSPI01G32870 vs. TrEMBL
Match: D7T030_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01220 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-28
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTG+KMQ+IF+ALV E+VYNDAR+L+EYCCFRFLSRDSS+IHP L EP FQRLIFIT
Sbjct: 135 MNGLTGEKMQKIFRALVPETVYNDARNLVEYCCFRFLSRDSSDIHPCLKEPAFQRLIFIT 194

Query: 61  MLAWENPYHEHANVSEEISFQ 82
           MLAWENPY+E AN S  I  +
Sbjct: 195 MLAWENPYYE-ANDSNAIGLE 214

[Close]
BLAST of CSPI01G32870 vs. TrEMBL
Match: W9RGJ0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009368 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.2e-28
Identity = 63/82 (76.83%), Postives = 69/82 (84.15%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           +NGLT QKMQ+IFKALV ESVYNDAR+L+EYCCFRFLSRDSSN+HPSL E  FQRL+FIT
Sbjct: 135 LNGLTAQKMQKIFKALVPESVYNDARNLVEYCCFRFLSRDSSNVHPSLKELAFQRLVFIT 194

Query: 61  MLAWENPYHEH-ANVSEEISFQ 82
           MLAWENPY E  A  S   SFQ
Sbjct: 195 MLAWENPYSEEPAKASARASFQ 216

[Close]
BLAST of CSPI01G32870 vs. TAIR10
Match: AT1G71240.1 (AT1G71240.1 Plant protein of unknown function (DUF639))

HSP 1 Score: 111.7 bits (278), Expect = 2.6e-25
Identity = 50/79 (63.29%), Postives = 59/79 (74.68%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNG+TG+KMQ IF+ +V  ++  DAR L+EYCCFRFLSRDSS  HP L EP FQRLIFIT
Sbjct: 144 MNGITGKKMQDIFETIVSPALSTDARYLVEYCCFRFLSRDSSEFHPCLKEPAFQRLIFIT 203

Query: 61  MLAWENPYHEHANVSEEIS 80
           MLAW NPY +  N   + S
Sbjct: 204 MLAWANPYCKERNARNDAS 222

[Close]
BLAST of CSPI01G32870 vs. NCBI nr
Match: gi|700211628|gb|KGN66724.1| (hypothetical protein Csa_1G665360 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 7.6e-51
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 1 

Query: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
          MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT
Sbjct: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60

Query: 61 MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE 99
          MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE
Sbjct: 61 MLAWENPYHEHANVSEEISFQVINAILSFVPSYEFPCE 98

[Close]
BLAST of CSPI01G32870 vs. NCBI nr
Match: gi|778664216|ref|XP_011660244.1| (PREDICTED: uncharacterized protein LOC101209123 isoform X1 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-40
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT
Sbjct: 140 MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 199

Query: 61  MLAWENPYHEHANVSEEISFQ 82
           MLAWENPYHEHANVSEEISFQ
Sbjct: 200 MLAWENPYHEHANVSEEISFQ 220

[Close]
BLAST of CSPI01G32870 vs. NCBI nr
Match: gi|778664226|ref|XP_011660247.1| (PREDICTED: uncharacterized protein LOC101209123 isoform X4 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 4.6e-40
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
          MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT
Sbjct: 1  MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60

Query: 61 MLAWENPYHEHANVSEEISFQ 82
          MLAWENPYHEHANVSEEISFQ
Sbjct: 61 MLAWENPYHEHANVSEEISFQ 81

[Close]
BLAST of CSPI01G32870 vs. NCBI nr
Match: gi|659086615|ref|XP_008444028.1| (PREDICTED: uncharacterized protein LOC103487477 [Cucumis melo])

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-39
Identity = 78/81 (96.30%), Postives = 81/81 (100.00%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTGQKMQRIFKALVHESVYNDARSL+EYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT
Sbjct: 140 MNGLTGQKMQRIFKALVHESVYNDARSLVEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 199

Query: 61  MLAWENPYHEHANVSEEISFQ 82
           MLAWENPYH+HA+VSEEISFQ
Sbjct: 200 MLAWENPYHDHASVSEEISFQ 220

[Close]
BLAST of CSPI01G32870 vs. NCBI nr
Match: gi|645223807|ref|XP_008218811.1| (PREDICTED: uncharacterized protein LOC103319093 [Prunus mume])

HSP 1 Score: 141.7 bits (356), Expect = 6.7e-31
Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 1 

Query: 1   MNGLTGQKMQRIFKALVHESVYNDARSLIEYCCFRFLSRDSSNIHPSLSEPTFQRLIFIT 60
           MNGLTGQKMQRIFKALV ES YNDAR+L+EYCCFRFLSRD+S+IHPSL EP FQRLIFIT
Sbjct: 141 MNGLTGQKMQRIFKALVSESTYNDARNLVEYCCFRFLSRDNSDIHPSLKEPAFQRLIFIT 200

Query: 61  MLAWENPYHEH-ANVSEEISFQ 82
           MLAWENPY E  AN SE+ SFQ
Sbjct: 201 MLAWENPYREDLANGSEKASFQ 222

The following BLAST results are available for this feature:
BLAST of CSPI01G32870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G32870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M096_CUCSA5.3e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G665360 PE=4 SV=1[more]
M5XJZ8_PRUPE4.7e-3182.93Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002078mg PE=4 SV=1[more]
A5BC42_VITVI1.3e-2873.86Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041585 PE=4 SV=1[more]
D7T030_VITVI2.2e-2876.54Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01220 PE=4 SV=... [more]
W9RGJ0_9ROSA2.2e-2876.83Uncharacterized protein OS=Morus notabilis GN=L484_009368 PE=4 SV=1[more]
BLAST of CSPI01G32870 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G71240.12.6e-2563.29 Plant protein of unknown function (DUF639)[more]
BLAST of CSPI01G32870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211628|gb|KGN66724.1|7.6e-51100.00hypothetical protein Csa_1G665360 [Cucumis sativus][more]
gi|778664216|ref|XP_011660244.1|4.6e-40100.00PREDICTED: uncharacterized protein LOC101209123 isoform X1 [Cucumis sativus][more]
gi|778664226|ref|XP_011660247.1|4.6e-40100.00PREDICTED: uncharacterized protein LOC101209123 isoform X4 [Cucumis sativus][more]
gi|659086615|ref|XP_008444028.1|5.1e-3996.30PREDICTED: uncharacterized protein LOC103487477 [Cucumis melo][more]
gi|645223807|ref|XP_008218811.1|6.7e-3182.93PREDICTED: uncharacterized protein LOC103319093 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006927DUF639
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G32870.1CSPI01G32870.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006927Protein of unknown function DUF639PFAMPF04842DUF639coord: 1..79
score: 3.0
NoneNo IPR availablePANTHERPTHR31860FAMILY NOT NAMEDcoord: 1..79
score: 1.7
NoneNo IPR availablePANTHERPTHR31860:SF3SUBFAMILY NOT NAMEDcoord: 1..79
score: 1.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G32870Csa1G665360Cucumber (Chinese Long) v2cpicuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G32870Melon (DHL92) v3.6.1cpimedB038
CSPI01G32870Melon (DHL92) v3.6.1cpimedB056
CSPI01G32870Cucumber (Gy14) v2cgybcpiB002
CSPI01G32870Silver-seed gourdcarcpiB0309
CSPI01G32870Silver-seed gourdcarcpiB0949
CSPI01G32870Cucumber (Chinese Long) v3cpicucB000
CSPI01G32870Watermelon (97103) v2cpiwmbB035
CSPI01G32870Wax gourdcpiwgoB113
CSPI01G32870Cucumber (Gy14) v1cgycpiB584
CSPI01G32870Cucurbita maxima (Rimu)cmacpiB084
CSPI01G32870Cucurbita maxima (Rimu)cmacpiB068
CSPI01G32870Cucurbita moschata (Rifu)cmocpiB061
CSPI01G32870Cucurbita moschata (Rifu)cmocpiB078
CSPI01G32870Melon (DHL92) v3.5.1cpimeB044
CSPI01G32870Melon (DHL92) v3.5.1cpimeB062
CSPI01G32870Watermelon (Charleston Gray)cpiwcgB041
CSPI01G32870Watermelon (97103) v1cpiwmB013
CSPI01G32870Watermelon (97103) v1cpiwmB032
CSPI01G32870Cucurbita pepo (Zucchini)cpecpiB360
CSPI01G32870Bottle gourd (USVL1VR-Ls)cpilsiB059