CSPI01G32620 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G32620
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTransposon Ty3-I Gag-Pol polyprotein
LocationChr1 : 27479107 .. 27480157 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAAATAACTCCTTATGCATCGCACACACTTCCCTTCGAGAATCCCTTCTAAAAGAAGCTCATAGTAGTGGTTTGTCCGGCCACTCTGGTAGAGACAAAACCTTCACCCTATTCACTCAAAAATTCTTTTGGCCACAACTAAAGAAAGATATTGCTAATTTTGTTAAAAGATGCTTCATATATGCCAAAGCTCTAATGGATCTAGTTCAAACCTGGGCCTTTATTGTCCACTACCTATTCCCCCTAACATTTGGAAAGACCTCTTTATGGATTTTGTTCTTGGCTTACCTAGAACCCAATGTGGTTATGATCCTATTTTGGTAGTCGTTGATCGATTTAGGAAAATGGTGCACTTTTTAGCTTGTAAAAAGACTAATGATGCTTTGAATGTTGCTAATCTTTTTTTTAGGGAAATTGTTCGCTTACACAAGATACCTAAGAGCATTGTTTCGGATCGGGATGTCAAATTCATGAGCTACTTTTGGTGCTCCCTATGGAAAAGATTCAGCACTAGCCTCCTATTTAGCTCTACCAGCCACCCCCAAACAGACGGCCAAATTGAAGTGACCAACCGAACACTTGGCAACATCCTTCACTACCTAGGTGGAGACAAACCCCACCAAGGAGATCTCAACCTTGCTCAAGCAGAATTTTCCTTCAACAACATGACCAACCAATCCACATACAAATCCCCTTTTGAAATTGTCCAGACCCAAGTCCCTCGCCGCACTCTTGATGTTGCACACTTGCCTGTTCCTTTTGATCTTAGTGCTGAAGCAACTCTCATGGCTAACCGAATCAAAAAAATCCATGAAGAAGTCCGCCAACCCTTAGAAGCTTCCATGCTTCCTACAAACTTAAAGCGGACATACATTGTAGACAAACCACTTTTGAAGTCAGAGAACTTGTAACGATCCATCTAAAAAAGCAACGCTTGCCTTCTGGACAACATTCAAAACTAACTAACAAAAAACTTGGCCCTTTTCCTATTTTAGCAAAGTTGGGACCGAATGCCTACCAGATAGATCTTCCTCCAACTATGAAGATTAG

mRNA sequence

ATGCTTCATATATGCCAAAGCTCTAATGGATCTAGTTCAAACCTGGGCCTTTATTGTCCACTACCTATTCCCCCTAACATTTGGAAAGACCTCTTTATGGATTTTGTTCTTGGCTTACCTAGAACCCAATGTGGTTATGATCCTATTTTGGTAGTCGTTGATCGATTTAGGAAAATGGTGCACTTTTTAGCTTGTAAAAAGACTAATGATGCTTTGAATGTTGCTAATCTTTTTTTTAGGGAAATTGTTCGCTTACACAAGATACCTAAGAGCATTGTTTCGGATCGGGATGTCAAATTCATGAGCTACTTTTGGTGCTCCCTATGGAAAAGATTCAGCACTAGCCTCCTATTTAGCTCTACCAGCCACCCCCAAACAGACGGCCAAATTGAAGTGACCAACCGAACACTTGGCAACATCCTTCACTACCTAGGTGGAGACAAACCCCACCAAGGAGATCTCAACCTTGCTCAAGCAGAATTTTCCTTCAACAACATGACCAACCAATCCACATACAAATCCCCTTTTGAAATTGTCCAGACCCAAGTCCCTCGCCGCACTCTTGATGTTGCACACTTGCCTGTTCCTTTTGATCTTAGTGCTGAAGCAACTCTCATGGCTAACCGAATCAAAAAAATCCATGAAGAAGTCCGCCAACCCTTAGAAGCTTCCATGCTTCCTACAAACTTAAAGCGGACATACATTGTAGACAAACCACTTTTGAAGTCAGAGAACTTCAAAGTTGGGACCGAATGCCTACCAGATAGATCTTCCTCCAACTATGAAGATTAG

Coding sequence (CDS)

ATGCTTCATATATGCCAAAGCTCTAATGGATCTAGTTCAAACCTGGGCCTTTATTGTCCACTACCTATTCCCCCTAACATTTGGAAAGACCTCTTTATGGATTTTGTTCTTGGCTTACCTAGAACCCAATGTGGTTATGATCCTATTTTGGTAGTCGTTGATCGATTTAGGAAAATGGTGCACTTTTTAGCTTGTAAAAAGACTAATGATGCTTTGAATGTTGCTAATCTTTTTTTTAGGGAAATTGTTCGCTTACACAAGATACCTAAGAGCATTGTTTCGGATCGGGATGTCAAATTCATGAGCTACTTTTGGTGCTCCCTATGGAAAAGATTCAGCACTAGCCTCCTATTTAGCTCTACCAGCCACCCCCAAACAGACGGCCAAATTGAAGTGACCAACCGAACACTTGGCAACATCCTTCACTACCTAGGTGGAGACAAACCCCACCAAGGAGATCTCAACCTTGCTCAAGCAGAATTTTCCTTCAACAACATGACCAACCAATCCACATACAAATCCCCTTTTGAAATTGTCCAGACCCAAGTCCCTCGCCGCACTCTTGATGTTGCACACTTGCCTGTTCCTTTTGATCTTAGTGCTGAAGCAACTCTCATGGCTAACCGAATCAAAAAAATCCATGAAGAAGTCCGCCAACCCTTAGAAGCTTCCATGCTTCCTACAAACTTAAAGCGGACATACATTGTAGACAAACCACTTTTGAAGTCAGAGAACTTCAAAGTTGGGACCGAATGCCTACCAGATAGATCTTCCTCCAACTATGAAGATTAG
Homology
[Close]
BLAST of CSPI01G32620 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-30
Identity = 72/163 (44.17%), Postives = 91/163 (55.83%), Query Frame = 1 

Query: 16   GLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHFLACKKTNDALNVA 75
            GL  PLPI    W D+ MDFV GLP T    + ILVVVDRF K  HF+A +KT DA  + 
Sbjct: 1157 GLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLI 1216

Query: 76   NLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTSHPQTDGQIEVTNR 135
            +L FR I   H  P++I SDRDV+  +  +  L KR       SS +HPQTDGQ E T +
Sbjct: 1217 DLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQ 1276

Query: 136  TLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEI 179
            TL  +L            + L Q EF +N+   ++  KSPFEI
Sbjct: 1277 TLNRLLRAYASTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEI 1319

[Close]
BLAST of CSPI01G32620 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 2.0e-29
Identity = 72/163 (44.17%), Postives = 91/163 (55.83%), Query Frame = 1 

Query: 16   GLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHFLACKKTNDALNVA 75
            GL  PLPI    W D+ MDFV GLP T    + ILVVVDRF K  HF+A +KT DA  + 
Sbjct: 1183 GLLQPLPIAEGRWLDISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLI 1242

Query: 76   NLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTSHPQTDGQIEVTNR 135
            +L FR I   H  P++I SDRDV+  +  +  L KR       SS +HPQTDGQ E T +
Sbjct: 1243 DLLFRYIFSYHGFPRTITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQ 1302

Query: 136  TLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEI 179
            TL  +L            + L Q EF +N+   ++  KSPFEI
Sbjct: 1303 TLNRLLRAYVSTNIQNWHVYLPQIEFVYNSTPTRTLGKSPFEI 1345

[Close]
BLAST of CSPI01G32620 vs. Swiss-Prot
Match: TF21_SCHPO (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 82/262 (31.30%), Postives = 128/262 (48.85%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPL-PIPPNI--WKDLFMDFVLGLPRTQCGYDPILVVVDRFRKM 62
            H CQ +   S N   Y PL PIPP+   W+ L MDF+  LP +  GY+ + VVVDRF KM
Sbjct: 958  HTCQINK--SRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKM 1017

Query: 63   VHFLACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFS 122
               + C K+  A   A +F + ++     PK I++D D  F S  W     +++  + FS
Sbjct: 1018 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1077

Query: 123  STSHPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIV 182
                PQTDGQ E TN+T+  +L  +    P+    +++  + S+NN  + +T  +PFEIV
Sbjct: 1078 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1137

Query: 183  QTQVPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP 242
                P   L    LP   D + E     N  + I  +V Q ++  +   N+K     D  
Sbjct: 1138 HRYSP--ALSPLELPSFSDKTDE-----NSQETI--QVFQTVKEHLNTNNIKMKKYFDMK 1197

Query: 243  LLKSENFKVGTECLPDRSSSNY 262
            + + E F+ G   +  R+ + +
Sbjct: 1198 IQEIEEFQPGDLVMVKRTKTGF 1207

[Close]
BLAST of CSPI01G32620 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 82/262 (31.30%), Postives = 128/262 (48.85%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPL-PIPPNI--WKDLFMDFVLGLPRTQCGYDPILVVVDRFRKM 62
            H CQ +   S N   Y PL PIPP+   W+ L MDF+  LP +  GY+ + VVVDRF KM
Sbjct: 958  HTCQINK--SRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKM 1017

Query: 63   VHFLACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFS 122
               + C K+  A   A +F + ++     PK I++D D  F S  W     +++  + FS
Sbjct: 1018 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1077

Query: 123  STSHPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIV 182
                PQTDGQ E TN+T+  +L  +    P+    +++  + S+NN  + +T  +PFEIV
Sbjct: 1078 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1137

Query: 183  QTQVPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP 242
                P   L    LP   D + E     N  + I  +V Q ++  +   N+K     D  
Sbjct: 1138 HRYSP--ALSPLELPSFSDKTDE-----NSQETI--QVFQTVKEHLNTNNIKMKKYFDMK 1197

Query: 243  LLKSENFKVGTECLPDRSSSNY 262
            + + E F+ G   +  R+ + +
Sbjct: 1198 IQEIEEFQPGDLVMVKRTKTGF 1207

[Close]
BLAST of CSPI01G32620 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 82/262 (31.30%), Postives = 128/262 (48.85%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPL-PIPPNI--WKDLFMDFVLGLPRTQCGYDPILVVVDRFRKM 62
            H CQ +   S N   Y PL PIPP+   W+ L MDF+  LP +  GY+ + VVVDRF KM
Sbjct: 958  HTCQINK--SRNHKPYGPLQPIPPSERPWESLSMDFITALPESS-GYNALFVVVDRFSKM 1017

Query: 63   VHFLACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFS 122
               + C K+  A   A +F + ++     PK I++D D  F S  W     +++  + FS
Sbjct: 1018 AILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFS 1077

Query: 123  STSHPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIV 182
                PQTDGQ E TN+T+  +L  +    P+    +++  + S+NN  + +T  +PFEIV
Sbjct: 1078 LPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIV 1137

Query: 183  QTQVPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP 242
                P   L    LP   D + E     N  + I  +V Q ++  +   N+K     D  
Sbjct: 1138 HRYSP--ALSPLELPSFSDKTDE-----NSQETI--QVFQTVKEHLNTNNIKMKKYFDMK 1197

Query: 243  LLKSENFKVGTECLPDRSSSNY 262
            + + E F+ G   +  R+ + +
Sbjct: 1198 IQEIEEFQPGDLVMVKRTKTGF 1207

[Close]
BLAST of CSPI01G32620 vs. TrEMBL
Match: M5WCC7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017790mg PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.3e-67
Identity = 133/262 (50.76%), Postives = 168/262 (64.12%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
            + CQ+S G   N GLY PLP+P +IW+DL MDFVLGLPRTQ G D + VVVDRF KM HF
Sbjct: 1146 YTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHF 1205

Query: 63   LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
            +AC+KT DA N+A LFFRE+VRLH +P SI SDRD KF+S+FW +LW+ F T+L  SST+
Sbjct: 1206 IACRKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTA 1265

Query: 123  HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
            HPQTDGQ EVTNRTLGN++  + G+KP Q D  L Q EF++N+  + +T KSPF IV T 
Sbjct: 1266 HPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQVEFAYNSAVHSATGKSPFSIVYTA 1325

Query: 183  VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP--- 242
            +P   +D+  LP     S  A  +A  +  + +EV+Q LE     TN K     DK    
Sbjct: 1326 MPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLE----QTNAKYKAAADKHRRV 1385

Query: 243  -----------LLKSENFKVGT 251
                        L+ E F VGT
Sbjct: 1386 KVFQEGDSVMIFLRKERFPVGT 1403

[Close]
BLAST of CSPI01G32620 vs. TrEMBL
Match: M5VJX1_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016013mg PE=4 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 9.1e-66
Identity = 130/262 (49.62%), Postives = 168/262 (64.12%), Query Frame = 1 

Query: 3   HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
           + CQ+S G   N GLY PLP+P +IW+DL MDFVLGLPRTQ G D + VVVDRF KM HF
Sbjct: 712 YTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQSGVDSVFVVVDRFSKMTHF 771

Query: 63  LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
           +ACKKT DA N+A LFFRE+VRLH +P SI S+RD KF+S+FW +LW+ F T+L  S+T+
Sbjct: 772 IACKKTADASNIAKLFFREVVRLHGVPTSITSNRDTKFLSHFWITLWRLFGTTLNRSNTA 831

Query: 123 HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
           HPQTDGQ EVTNRTLGN++  + G+KP + D  L Q EF++N+  + +T KSPF IV T 
Sbjct: 832 HPQTDGQTEVTNRTLGNMVRSVCGEKPKRWDYALPQMEFAYNSAVHSATGKSPFSIVYTA 891

Query: 183 VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP--- 242
           +P   +D+  LP     S  A  +A  +  + +EV+Q LE     TN K     D+    
Sbjct: 892 IPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLE----QTNAKYKAAADRHRRV 951

Query: 243 -----------LLKSENFKVGT 251
                       L+ E F VGT
Sbjct: 952 KVFQEGDSVMIFLRKERFPVGT 969

[Close]
BLAST of CSPI01G32620 vs. TrEMBL
Match: M5WQR6_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015715mg PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.9e-65
Identity = 126/217 (58.06%), Postives = 151/217 (69.59%), Query Frame = 1 

Query: 5    CQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHFLA 64
            CQ +     N GLY PLPIP   WKDL MDFVLGLP+T  GYD I V+VDRF KM HFL 
Sbjct: 1034 CQLAKARKRNTGLYTPLPIPHTPWKDLSMDFVLGLPKTSRGYDSIFVIVDRFSKMAHFLP 1093

Query: 65   CKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTSHP 124
            C K  DA  VA LFF+E+VRLH +P SIVSDRDVKF+SYFW +LWK F T+L FSS  HP
Sbjct: 1094 CAKNTDASYVAKLFFKEVVRLHGLPVSIVSDRDVKFVSYFWKTLWKLFGTTLKFSSAFHP 1153

Query: 125  QTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQVP 184
            QTDGQ EV NR+LG++L  L GDKP   DL L  AEF++NN  N+ST KSPFE+V    P
Sbjct: 1154 QTDGQTEVVNRSLGDLLRCLVGDKPGNWDLLLPVAEFAYNNSVNRSTGKSPFEVVHGFSP 1213

Query: 185  RRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPL 222
            R  +D+  LPV    S  AT  A  I+++H++VR+ +
Sbjct: 1214 RSPVDLVALPVAARTSDSATSFAEHIRQLHDDVRRQI 1250

[Close]
BLAST of CSPI01G32620 vs. TrEMBL
Match: M5W531_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026856mg PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 3.8e-64
Identity = 124/236 (52.54%), Postives = 157/236 (66.53%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
            + CQ+S G   N GLY PLP+P +IW+DL MDFVLG PRTQ   D + VV DRF KM HF
Sbjct: 1154 YTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGFPRTQRRVDSVFVVADRFSKMAHF 1213

Query: 63   LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
            +ACKKT DA N+A LFFRE+VRLH +P SI SDRD KF+S+FW +LW+ F T+L  SST+
Sbjct: 1214 IACKKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTA 1273

Query: 123  HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
            HPQTDGQ EVTNRTLGN++  + G+KP Q D  L Q EF++N+  + +T KSPF IV T 
Sbjct: 1274 HPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQMEFAYNSAVHSATGKSPFSIVYTA 1333

Query: 183  VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDK 239
             P   +D+  LP     S  A  +A  +  + +EV+Q LE     TN K     D+
Sbjct: 1334 TPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLE----QTNAKYKAAADR 1385

[Close]
BLAST of CSPI01G32620 vs. TrEMBL
Match: M5W2R3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025991mg PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.6e-62
Identity = 122/217 (56.22%), Postives = 149/217 (68.66%), Query Frame = 1 

Query: 5    CQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHFLA 64
            CQ +     N G+Y PLPIP   WKDL MDFVLGLP+T  GYD I V+VD F KM HFL 
Sbjct: 863  CQLAKARKRNTGVYTPLPIPHAPWKDLSMDFVLGLPKTSRGYDSIFVIVDCFSKMAHFLP 922

Query: 65   CKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTSHP 124
            C K  DA  +A LFF+E+VRLH +  SIVSDRD KF+SYFW +LWK F T+L FSS  HP
Sbjct: 923  CAKNTDASYMAKLFFKEVVRLHGLLVSIVSDRDFKFVSYFWKTLWKLFGTTLKFSSAFHP 982

Query: 125  QTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQVP 184
            QTDGQ EV NR+LG++LH L GDKP   DL L  AEF++NN  N+ST KSPFE+V    P
Sbjct: 983  QTDGQTEVVNRSLGDLLHCLVGDKPGNWDLLLPVAEFTYNNSVNRSTGKSPFEVVHGFSP 1042

Query: 185  RRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPL 222
            R  +D+  LPV    S  AT  A  I+++H++VR+ +
Sbjct: 1043 RSPVDLVALPVAARSSDSATSFAEHIRQLHDDVRRQI 1079

[Close]
BLAST of CSPI01G32620 vs. NCBI nr
Match: gi|685323672|ref|XP_009151506.1| (PREDICTED: serine/threonine-protein kinase TIO-like, partial [Brassica rapa])

HSP 1 Score: 270.4 bits (690), Expect = 3.3e-69
Identity = 139/262 (53.05%), Postives = 170/262 (64.89%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
            +ICQ S G S N GLY PLPIP +IW+DL MDFVLGLPRTQ G D + VVVDRF KM HF
Sbjct: 762  YICQVSKGQSQNTGLYMPLPIPEDIWQDLSMDFVLGLPRTQRGVDSVFVVVDRFSKMSHF 821

Query: 63   LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
            +ACKKT DA N+A LFFRE+VRLH +PK+I+SDRD KF+S+FW +LW+ F TSL  SST+
Sbjct: 822  IACKKTADASNIAKLFFREVVRLHGVPKTIISDRDTKFLSHFWITLWRMFGTSLKRSSTA 881

Query: 123  HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
            HPQTDGQ EVTNRTLGN++  + GDKP Q DL L Q EF++N+  + +T KSPF +V   
Sbjct: 882  HPQTDGQTEVTNRTLGNMIRSVCGDKPKQWDLALPQVEFAYNSAVHSATGKSPFSLVYCS 941

Query: 183  VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDK---- 242
            +P+  +D+  LP    +S  A  MA  I    + VR  LEA    T  K     DK    
Sbjct: 942  IPKHVVDLVKLPKAPGVSISAEAMAEDILATRDAVRAKLEA----TGQKNKEAADKRRRL 1001

Query: 243  ----------PLLKSENFKVGT 251
                        L+ E F VGT
Sbjct: 1002 KVFKEGDEVMVFLRKERFPVGT 1019

[Close]
BLAST of CSPI01G32620 vs. NCBI nr
Match: gi|595851814|ref|XP_007210190.1| (hypothetical protein PRUPE_ppa017790mg [Prunus persica])

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-66
Identity = 133/262 (50.76%), Postives = 168/262 (64.12%), Query Frame = 1 

Query: 3    HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
            + CQ+S G   N GLY PLP+P +IW+DL MDFVLGLPRTQ G D + VVVDRF KM HF
Sbjct: 1146 YTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQRGVDSVFVVVDRFSKMAHF 1205

Query: 63   LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
            +AC+KT DA N+A LFFRE+VRLH +P SI SDRD KF+S+FW +LW+ F T+L  SST+
Sbjct: 1206 IACRKTADASNIAKLFFREVVRLHGVPTSITSDRDTKFLSHFWITLWRLFGTTLNRSSTA 1265

Query: 123  HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
            HPQTDGQ EVTNRTLGN++  + G+KP Q D  L Q EF++N+  + +T KSPF IV T 
Sbjct: 1266 HPQTDGQTEVTNRTLGNMVRSVCGEKPKQWDYALPQVEFAYNSAVHSATGKSPFSIVYTA 1325

Query: 183  VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP--- 242
            +P   +D+  LP     S  A  +A  +  + +EV+Q LE     TN K     DK    
Sbjct: 1326 MPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLE----QTNAKYKAAADKHRRV 1385

Query: 243  -----------LLKSENFKVGT 251
                        L+ E F VGT
Sbjct: 1386 KVFQEGDSVMIFLRKERFPVGT 1403

[Close]
BLAST of CSPI01G32620 vs. NCBI nr
Match: gi|595792899|ref|XP_007200198.1| (hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica])

HSP 1 Score: 258.5 bits (659), Expect = 1.3e-65
Identity = 130/262 (49.62%), Postives = 168/262 (64.12%), Query Frame = 1 

Query: 3   HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
           + CQ+S G   N GLY PLP+P +IW+DL MDFVLGLPRTQ G D + VVVDRF KM HF
Sbjct: 712 YTCQTSKGQVQNTGLYMPLPVPNDIWQDLAMDFVLGLPRTQSGVDSVFVVVDRFSKMTHF 771

Query: 63  LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
           +ACKKT DA N+A LFFRE+VRLH +P SI S+RD KF+S+FW +LW+ F T+L  S+T+
Sbjct: 772 IACKKTADASNIAKLFFREVVRLHGVPTSITSNRDTKFLSHFWITLWRLFGTTLNRSNTA 831

Query: 123 HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
           HPQTDGQ EVTNRTLGN++  + G+KP + D  L Q EF++N+  + +T KSPF IV T 
Sbjct: 832 HPQTDGQTEVTNRTLGNMVRSVCGEKPKRWDYALPQMEFAYNSAVHSATGKSPFSIVYTA 891

Query: 183 VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDKP--- 242
           +P   +D+  LP     S  A  +A  +  + +EV+Q LE     TN K     D+    
Sbjct: 892 IPNHVVDLVKLPRGQQTSVAAKNLAEEVVAVRDEVKQKLE----QTNAKYKAAADRHRRV 951

Query: 243 -----------LLKSENFKVGT 251
                       L+ E F VGT
Sbjct: 952 KVFQEGDSVMIFLRKERFPVGT 969

[Close]
BLAST of CSPI01G32620 vs. NCBI nr
Match: gi|595840170|ref|XP_007207981.1| (hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica])

HSP 1 Score: 255.8 bits (652), Expect = 8.5e-65
Identity = 126/217 (58.06%), Postives = 151/217 (69.59%), Query Frame = 1 

Query: 5    CQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHFLA 64
            CQ +     N GLY PLPIP   WKDL MDFVLGLP+T  GYD I V+VDRF KM HFL 
Sbjct: 1034 CQLAKARKRNTGLYTPLPIPHTPWKDLSMDFVLGLPKTSRGYDSIFVIVDRFSKMAHFLP 1093

Query: 65   CKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTSHP 124
            C K  DA  VA LFF+E+VRLH +P SIVSDRDVKF+SYFW +LWK F T+L FSS  HP
Sbjct: 1094 CAKNTDASYVAKLFFKEVVRLHGLPVSIVSDRDVKFVSYFWKTLWKLFGTTLKFSSAFHP 1153

Query: 125  QTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQVP 184
            QTDGQ EV NR+LG++L  L GDKP   DL L  AEF++NN  N+ST KSPFE+V    P
Sbjct: 1154 QTDGQTEVVNRSLGDLLRCLVGDKPGNWDLLLPVAEFAYNNSVNRSTGKSPFEVVHGFSP 1213

Query: 185  RRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPL 222
            R  +D+  LPV    S  AT  A  I+++H++VR+ +
Sbjct: 1214 RSPVDLVALPVAARTSDSATSFAEHIRQLHDDVRRQI 1250

[Close]
BLAST of CSPI01G32620 vs. NCBI nr
Match: gi|658024952|ref|XP_008347875.1| (PREDICTED: uncharacterized protein LOC103411008 [Malus domestica])

HSP 1 Score: 253.8 bits (647), Expect = 3.2e-64
Identity = 126/236 (53.39%), Postives = 159/236 (67.37%), Query Frame = 1 

Query: 3   HICQSSNGSSSNLGLYCPLPIPPNIWKDLFMDFVLGLPRTQCGYDPILVVVDRFRKMVHF 62
           + CQ S G   N GLY PLP+P +IW+D+ MDFVLGLPRT  G D + VVVDRF KM HF
Sbjct: 746 YTCQVSKGQVQNTGLYMPLPVPNDIWEDIAMDFVLGLPRTPRGMDXVFVVVDRFSKMAHF 805

Query: 63  LACKKTNDALNVANLFFREIVRLHKIPKSIVSDRDVKFMSYFWCSLWKRFSTSLLFSSTS 122
           +AC+KT D  N+A LFFRE+VRLH +PKSI SDRD KF+S+FW +LW+ F T+L  S+T+
Sbjct: 806 IACRKTADXSNIAKLFFREVVRLHGVPKSITSDRDTKFLSHFWITLWRMFGTTLNRSTTA 865

Query: 123 HPQTDGQIEVTNRTLGNILHYLGGDKPHQGDLNLAQAEFSFNNMTNQSTYKSPFEIVQTQ 182
           HPQTDGQ EV NRTLGN++  + G+K  Q D  L Q EFS+N+  +++T KSPF IV T 
Sbjct: 866 HPQTDGQTEVXNRTLGNMVRSICGEKTKQWDYALPQMEFSYNSXVHRATGKSPFSIVYTA 925

Query: 183 VPRRTLDVAHLPVPFDLSAEATLMANRIKKIHEEVRQPLEASMLPTNLKRTYIVDK 239
            P   +D+  LP    LS     MA  +  I +EV+Q LE     TN+K    VDK
Sbjct: 926 TPHHVVDLVKLPRGHGLSIAXENMAEDVVAIRDEVKQRLE----QTNVKYKEAVDK 977

The following BLAST results are available for this feature:
BLAST of CSPI01G32620 vs. Swiss-Prot
Match NameE-valueIdentityDescription
YG31B_YEAST8.9e-3044.17Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YI31B_YEAST2.0e-2944.17Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
TF21_SCHPO1.5e-2431.30Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248... [more]
TF211_SCHPO1.5e-2431.30Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
TF212_SCHPO1.5e-2431.30Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
BLAST of CSPI01G32620 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WCC7_PRUPE8.3e-6750.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017790mg PE=4 SV=1[more]
M5VJX1_PRUPE9.1e-6649.62Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016013mg PE=4 S... [more]
M5WQR6_PRUPE5.9e-6558.06Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015715mg PE=4 S... [more]
M5W531_PRUPE3.8e-6452.54Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026856mg PE=4 SV=1[more]
M5W2R3_PRUPE3.6e-6256.22Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025991mg PE=4 SV=1[more]
BLAST of CSPI01G32620 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G32620 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|685323672|ref|XP_009151506.1|3.3e-6953.05PREDICTED: serine/threonine-protein kinase TIO-like, partial [Brassica rapa][more]
gi|595851814|ref|XP_007210190.1|1.2e-6650.76hypothetical protein PRUPE_ppa017790mg [Prunus persica][more]
gi|595792899|ref|XP_007200198.1|1.3e-6549.62hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica][more]
gi|595840170|ref|XP_007207981.1|8.5e-6558.06hypothetical protein PRUPE_ppa015715mg, partial [Prunus persica][more]
gi|658024952|ref|XP_008347875.1|3.2e-6453.39PREDICTED: uncharacterized protein LOC103411008 [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G32620.1CSPI01G32620.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 32..138
score: 2.8
IPR001584Integrase, catalytic corePROFILEPS50994INTEGRASEcoord: 21..183
score: 15
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 34..180
score: 8.3
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 20..177
score: 7.59
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 4..222
score: 6.0
NoneNo IPR availablePANTHERPTHR24559:SF174SUBFAMILY NOT NAMEDcoord: 4..222
score: 6.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G32620Bottle gourd (USVL1VR-Ls)cpilsiB059
CSPI01G32620Melon (DHL92) v3.6.1cpimedB038
CSPI01G32620Cucumber (Gy14) v2cgybcpiB002
CSPI01G32620Silver-seed gourdcarcpiB0949
CSPI01G32620Cucumber (Chinese Long) v3cpicucB000
CSPI01G32620Watermelon (97103) v2cpiwmbB035
CSPI01G32620Cucumber (Gy14) v1cgycpiB528
CSPI01G32620Cucurbita maxima (Rimu)cmacpiB084
CSPI01G32620Cucurbita maxima (Rimu)cmacpiB058
CSPI01G32620Cucurbita moschata (Rifu)cmocpiB050
CSPI01G32620Cucurbita moschata (Rifu)cmocpiB078
CSPI01G32620Cucumber (Chinese Long) v2cpicuB001
CSPI01G32620Melon (DHL92) v3.5.1cpimeB044
CSPI01G32620Watermelon (Charleston Gray)cpiwcgB041
CSPI01G32620Watermelon (97103) v1cpiwmB013
CSPI01G32620Cucurbita pepo (Zucchini)cpecpiB350