CSPI01G31990 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G31990
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAcetolactate synthase small subunit
LocationChr1 : 26724074 .. 26726377 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTACTCAGAAGACAAAAGGGAAAAAAAAGAAAAAAATGGAAAATAAACGTGAGGAATGCCAAATGTCATTTAGCGTCCGCATGCGGTGCGAGTCATGTAACTGTGTGGTTTGCTTTTAACTCTCCCACTCCTCACTTTCTTTCCGAAACCACTATTCAATCCATTCATCCATGGCGGCCGCCGTAGCGCTTTGCCCAGCTCCTGTAAAAGCTCACAAACCTCCCTATTCTGCACTTGCCTCTAGACATTTCTTCTCTACAAGTTTGATCGTCAAGTACCAGGAAGTGCAGAAATGGAACCGTTTCGAGTTCCAGAGGCTGCAGGTTTCTTCTGCTGCTGTTAATGATAATGCAGTGACTGTAACCGACTCTTCTCGGCCCTCCATTCGTTCTACGTAAGTTTCTTTTGCAAAAAACCCGGTTAATTATCATTCCGTTTTCTAACTTCTTGTTTTTGCTTTTCCAGCACTTTCTTATTCCATTGTTTATTTTGAGTTGTTCGTTTTTTCTAAAACAAGCATGTTCTGTTTGGCTGATTCACTGTTCATTTTTATTTTGCTGTTTTTTAAAAGATATTATTTAATTTAGTGATGATAAATATTCTTTAGTTTCAAGTTTCTTTAATTTTTCCCTCTAAGTAACAACTATTTTGTTGATACGGGGGATTTACCAACACGAGGGCTAATGGGTTTACAGATTCCTTTTGCATTAGCCGAAAAAAGTAATTGCATTACTGTTTACGTCCTTTTTTTTTTTTAAGGAAGAGAAACGAATTTCATCAATCACATAGTTGTTTCTTACTAGTTTCTTGGAAATCATTTTCATCTAGCTCTTATTTTAGGCTATTTTATAGATTTGATATCCAAACTTTGATTGTTGTTTTTTCTATTTGTTGGAAAGTATGAATAAATTGATTTTGTTTTTTTGTTTTGTACTCACAATCTTCATTAGAGAGTGTGTTTTTTTGGTAAAGGGATGTGTCTTTCCTCAAAAGACACAACAGTAAACCGAGAGATGTGACTATTTGAGTGACCAAAATAGGGAGAATTGTTACATGCATATTGTAGTGTTCATTGAGTCTCTTGGTTGAAATGATGCATTCACATGTTAGTAACCAGTCCTATTTTGGAAGACAATCCGTGTTCATGGTACCTTCAATAACATTGAGGGAAGGGAACAACCTTGTCTTAAGGAAAAAAAATGTGGATTCAATGGGTTTGGATTAATTGTTTTCATTGTCTCTTTATTATGCTATAATTTATGCTTTATGCTTTATGCTCTTTGTATAACCCTCATGTACCTAGAGTATCAATCTCTTTCATTTTACATCTATATGGATAAAGAGTCCTGTTTCCTTTTCAAAAGAAAAAAAAAAAAAACACTGTTTTTTCAATTTAGTTGTAATAAATTCTTGCTATTAGGAAGGTTGCATGAATGTTGCCATGCATATTCAATAGCCTAGCGAGATAAATTAAGAGTGGGTAGGCCAAAAATTATGTTTCAAAATTTTAACTGATTGTCACATCTGCTGTTTTTTCCATCCACCCTTATTATTCACTTGTGACACATCATGTCAAGTTGTTGCTGGTTAATCCAATTTATGCGCCACACCAATATCTAAGTCACAGTGCCAATGACTTATCACAATCAAAATCAGAAGTTTTAGATCATAGTTGGAAGCTTTAAAGTTGATGGACTATATTAAAGTTTAGTGGTTAAATTTGTGATTTAACATTTCCTTTTATTTTCTTTGTCAAAGCATCTAACTCATTATTTTTATTATATGAGCTATTATGTTTGCTGTAGGAGTAAAGCGGGACTTTATCTCAATTATACTGTGTTTTTAAGATTTCTTACCGTTGATGTTATAAATCAAGGTAACATTGTATTCTTGTTTGCTTTTAGGGTGATGCGACATACTATATCTGTGTTTGTTGGTGATGAAAGTGGAATAATAAACCGAATTGCGGGTGTCTTTGCTAGAAGAGGTTACAACATTGAGTCCCTTGCCGTTGGATTGAACAAGGATAAGGCTCTCTTTACCATTGTTGTTACTGGAACGGAGAATGTCTTGAGACAAGTTGTGGAGCAGCTAAACAAACTTGTCAATGTTATTAAGGTTTGGTTGATCCTTCATGCTATTTTTCTTTATTTTGGGAAGATGTGTGGGTAGTAGGGAAATCTTTTTGCTTGCAGTTTCCTTGTCTTTTTGGGGTTGCTGTTGACATAGGGAATTCGTGGGTGATAGTTGGGGTAGTATTTGATCTTGGAAGAGCATTTATAGAAGAAATTCAAGTAGGTTAA

mRNA sequence

ATGGCGGCCGCCGTAGCGCTTTGCCCAGCTCCTGTAAAAGCTCACAAACCTCCCTATTCTGCACTTGCCTCTAGACATTTCTTCTCTACAAGTTTGATCGTCAAGTACCAGGAAGTGCAGAAATGGAACCGTTTCGAGTTCCAGAGGCTGCAGGTTTCTTCTGCTGCTGTTAATGATAATGCAGTGACTGTAACCGACTCTTCTCGGCCCTCCATTCGTTCTACGGTGATGCGACATACTATATCTGTGTTTGTTGGTGATGAAAGTGGAATAATAAACCGAATTGCGGGTGTCTTTGCTAGAAGAGGTTACAACATTGAGTCCCTTGCCGTTGGATTGAACAAGGATAAGGCTCTCTTTACCATTGTTGTTACTGGAACGGAGAATGTCTTGAGACAAGTTGTGGAGCAGCTAAACAAACTTGTCAATGTTATTAAGTTTCCTTGTCTTTTTGGGGTTGCTGTTGACATAGGGAATTCGTGGGTGATAGTTGGGGTAGTATTTGATCTTGGAAGAGCATTTATAGAAGAAATTCAAGTAGGTTAA

Coding sequence (CDS)

ATGGCGGCCGCCGTAGCGCTTTGCCCAGCTCCTGTAAAAGCTCACAAACCTCCCTATTCTGCACTTGCCTCTAGACATTTCTTCTCTACAAGTTTGATCGTCAAGTACCAGGAAGTGCAGAAATGGAACCGTTTCGAGTTCCAGAGGCTGCAGGTTTCTTCTGCTGCTGTTAATGATAATGCAGTGACTGTAACCGACTCTTCTCGGCCCTCCATTCGTTCTACGGTGATGCGACATACTATATCTGTGTTTGTTGGTGATGAAAGTGGAATAATAAACCGAATTGCGGGTGTCTTTGCTAGAAGAGGTTACAACATTGAGTCCCTTGCCGTTGGATTGAACAAGGATAAGGCTCTCTTTACCATTGTTGTTACTGGAACGGAGAATGTCTTGAGACAAGTTGTGGAGCAGCTAAACAAACTTGTCAATGTTATTAAGTTTCCTTGTCTTTTTGGGGTTGCTGTTGACATAGGGAATTCGTGGGTGATAGTTGGGGTAGTATTTGATCTTGGAAGAGCATTTATAGAAGAAATTCAAGTAGGTTAA
Homology
[Close]
BLAST of CSPI01G31990 vs. Swiss-Prot
Match: ILVH1_ARATH (Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=VAT1 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-31
Identity = 74/95 (77.89%), Postives = 79/95 (83.16%), Query Frame = 1 

Query: 52  VSSAAVNDNAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAV 111
           V SAA  D A+T   S  P+    V RHTISVFVGDESGIINRIAGVFARRGYNIESLAV
Sbjct: 50  VLSAASTDKAITTAQSVAPTACDRVRRHTISVFVGDESGIINRIAGVFARRGYNIESLAV 109

Query: 112 GLNKDKALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           GLN+DKALFTIVV GT+ VL+QVVEQLNKLVNVIK
Sbjct: 110 GLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIK 144

[Close]
BLAST of CSPI01G31990 vs. Swiss-Prot
Match: ILVH2_ARATH (Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=At2g31810 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.3e-27
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 1 

Query: 57  VNDNAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKD 116
           ++D + +   S+ P  +S V +HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+D
Sbjct: 67  ISDASFSEASSATP--KSKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRD 126

Query: 117 KALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           KALFTIVV GTE VL+QV+EQL KLVNV+K
Sbjct: 127 KALFTIVVCGTERVLQQVIEQLQKLVNVLK 154

[Close]
BLAST of CSPI01G31990 vs. Swiss-Prot
Match: ILVH_NICPL (Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifolia PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-19
Identity = 50/56 (89.29%), Postives = 54/56 (96.43%), Query Frame = 1 

Query: 91  IINRIAGVFARRGYNIESLAVGLNKDKALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           +INRIAGVFARRGYNIESLAVGLNKDKALFTIVV+GTE VL+QV+EQL KLVNVIK
Sbjct: 37  MINRIAGVFARRGYNIESLAVGLNKDKALFTIVVSGTERVLQQVMEQLQKLVNVIK 92

[Close]
BLAST of CSPI01G31990 vs. Swiss-Prot
Match: ILVH_SYNY3 (Acetolactate synthase small subunit OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=ilvH PE=3 SV=2)

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-15
Identity = 43/72 (59.72%), Postives = 56/72 (77.78%), Query Frame = 1 

Query: 77  MRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNK--DKALFTIVVTGTENVLRQV 136
           M+HT+SV V DE+G++ RIAG+FARRG+NIESLAVG  +  D +  T+VV G EN + Q+
Sbjct: 1   MKHTLSVLVEDEAGVLTRIAGLFARRGFNIESLAVGSAEQGDVSRITMVVPGDENTIEQL 60

Query: 137 VEQLNKLVNVIK 147
            +QL KLVNVIK
Sbjct: 61  TKQLYKLVNVIK 72

[Close]
BLAST of CSPI01G31990 vs. Swiss-Prot
Match: ILVH_GUITH (Acetolactate synthase small subunit OS=Guillardia theta GN=ilvH PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 39/72 (54.17%), Postives = 53/72 (73.61%), Query Frame = 1 

Query: 77  MRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL--FTIVVTGTENVLRQV 136
           M+HT+SV V DESG++ RIAG+FARRG+NIESLAVG  +   +   T+VV   E  + Q+
Sbjct: 1   MKHTLSVLVEDESGVLTRIAGLFARRGFNIESLAVGPTEKLGISRITMVVPSDERTIEQL 60

Query: 137 VEQLNKLVNVIK 147
            +QL KLVN++K
Sbjct: 61  TKQLYKLVNILK 72

[Close]
BLAST of CSPI01G31990 vs. TrEMBL
Match: A0A0A0M346_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652240 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 3.9e-92
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1 

Query: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60
           MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN
Sbjct: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60

Query: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120
           AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF
Sbjct: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120

Query: 121 TIVVTGTENVLRQVVEQLNKLVNVIKFPCLFGVAVDIGNSWVIVGVVFDLGRAFIEEIQV 180
           TIVVTGTENVLRQVVEQLNKLVNVIKFPCLF VAVDIGNSWVIVGVVFDLGRAFIEEIQV
Sbjct: 121 TIVVTGTENVLRQVVEQLNKLVNVIKFPCLFRVAVDIGNSWVIVGVVFDLGRAFIEEIQV 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]
BLAST of CSPI01G31990 vs. TrEMBL
Match: M5X2J9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005063mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.0e-36
Identity = 97/147 (65.99%), Postives = 107/147 (72.79%), Query Frame = 1 

Query: 1   MAAAVAL-CPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVND 60
           MAAAV+  C  P+   KP    +  RH F  S    +Q+  KW  F  + L VS++   D
Sbjct: 1   MAAAVSSPCSTPLMTQKPSLR-VDFRHGFLKSFDFGHQKPIKWKTFHLKELVVSAST--D 60

Query: 61  NAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120
           NAV+VTD      RS V RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL
Sbjct: 61  NAVSVTDPVPSLTRSKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120

Query: 121 FTIVVTGTENVLRQVVEQLNKLVNVIK 147
           FTIVV+GTE VLRQVVEQLNKLVNVIK
Sbjct: 121 FTIVVSGTEKVLRQVVEQLNKLVNVIK 144

[Close]
BLAST of CSPI01G31990 vs. TrEMBL
Match: B9HHZ9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07820g PE=4 SV=2)

HSP 1 Score: 145.2 bits (365), Expect = 7.8e-32
Identity = 91/148 (61.49%), Postives = 102/148 (68.92%), Query Frame = 1 

Query: 1   MAAAVALCPAPVKAHKPPYSALASRHFFS--TSLIVKYQEVQKWNRFEFQRLQVSSAAVN 60
           MAA+V  C   +   + P S L S   FS  +S  V +     W      ++  S +  N
Sbjct: 1   MAASVPQCSTRITT-QTPCSKLDSVGGFSRKSSGFVHFLRPSVWKSNNAVKVSCSISKEN 60

Query: 61  DNAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKA 120
            +AV+V DS     RS + RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKA
Sbjct: 61  GSAVSVADSVPTVTRSRLQRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKA 120

Query: 121 LFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           LFTIVV GTENVLRQVVEQLNKLVNVIK
Sbjct: 121 LFTIVVCGTENVLRQVVEQLNKLVNVIK 147

[Close]
BLAST of CSPI01G31990 vs. TrEMBL
Match: A0A0K9R7U2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101660 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-30
Identity = 76/110 (69.09%), Postives = 86/110 (78.18%), Query Frame = 1 

Query: 40  QKWNRFEFQRLQVSSAAVNDNAVTVTDS---SRPSIRSTVMRHTISVFVGDESGIINRIA 99
           +KW   EF ++ VS+  V+        S   S PS RS   RHTISVFVGDESG+INRIA
Sbjct: 42  RKWKNLEFNKMVVSATNVDQKGGESNFSFNGSSPSPRSPARRHTISVFVGDESGMINRIA 101

Query: 100 GVFARRGYNIESLAVGLNKDKALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           GVFARRGYNIESLAVGLNKDKALFT+VVTGT+NVLRQV+EQL KLVNV+K
Sbjct: 102 GVFARRGYNIESLAVGLNKDKALFTVVVTGTDNVLRQVMEQLQKLVNVLK 151

[Close]
BLAST of CSPI01G31990 vs. TrEMBL
Match: V4W6M4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015040mg PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-30
Identity = 84/131 (64.12%), Postives = 95/131 (72.52%), Query Frame = 1 

Query: 16  KPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDNAVTVTDSSRPSIRST 75
           +PP     S   FS+S  V  +++Q         L  +S + ++NA+ VT S  P   S 
Sbjct: 29  RPPSQGRTS---FSSSAEVSSKKLQ---------LVTASGSSSNNALPVTQSVPPITASK 88

Query: 76  VMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALFTIVVTGTENVLRQVV 135
           V RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLN DKALFTIVV+GTE VLRQVV
Sbjct: 89  VKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNVDKALFTIVVSGTERVLRQVV 147

Query: 136 EQLNKLVNVIK 147
           EQLNKLVNVIK
Sbjct: 149 EQLNKLVNVIK 147

[Close]
BLAST of CSPI01G31990 vs. TAIR10
Match: AT5G16290.1 (AT5G16290.1 VALINE-TOLERANT 1)

HSP 1 Score: 137.5 bits (345), Expect = 8.2e-33
Identity = 74/95 (77.89%), Postives = 79/95 (83.16%), Query Frame = 1 

Query: 52  VSSAAVNDNAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAV 111
           V SAA  D A+T   S  P+    V RHTISVFVGDESGIINRIAGVFARRGYNIESLAV
Sbjct: 50  VLSAASTDKAITTAQSVAPTACDRVRRHTISVFVGDESGIINRIAGVFARRGYNIESLAV 109

Query: 112 GLNKDKALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           GLN+DKALFTIVV GT+ VL+QVVEQLNKLVNVIK
Sbjct: 110 GLNEDKALFTIVVLGTDKVLQQVVEQLNKLVNVIK 144

[Close]
BLAST of CSPI01G31990 vs. TAIR10
Match: AT2G31810.1 (AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.2e-29
Identity = 65/90 (72.22%), Postives = 77/90 (85.56%), Query Frame = 1 

Query: 57  VNDNAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKD 116
           ++D + +   S+ P  +S V +HTISVFVGDESG+INRIAGVFARRGYNIESLAVGLN+D
Sbjct: 67  ISDASFSEASSATP--KSKVRKHTISVFVGDESGMINRIAGVFARRGYNIESLAVGLNRD 126

Query: 117 KALFTIVVTGTENVLRQVVEQLNKLVNVIK 147
           KALFTIVV GTE VL+QV+EQL KLVNV+K
Sbjct: 127 KALFTIVVCGTERVLQQVIEQLQKLVNVLK 154

[Close]
BLAST of CSPI01G31990 vs. NCBI nr
Match: gi|700211545|gb|KGN66641.1| (hypothetical protein Csa_1G652240 [Cucumis sativus])

HSP 1 Score: 345.5 bits (885), Expect = 5.6e-92
Identity = 180/181 (99.45%), Postives = 180/181 (99.45%), Query Frame = 1 

Query: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60
           MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN
Sbjct: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60

Query: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120
           AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF
Sbjct: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120

Query: 121 TIVVTGTENVLRQVVEQLNKLVNVIKFPCLFGVAVDIGNSWVIVGVVFDLGRAFIEEIQV 180
           TIVVTGTENVLRQVVEQLNKLVNVIKFPCLF VAVDIGNSWVIVGVVFDLGRAFIEEIQV
Sbjct: 121 TIVVTGTENVLRQVVEQLNKLVNVIKFPCLFRVAVDIGNSWVIVGVVFDLGRAFIEEIQV 180

Query: 181 G 182
           G
Sbjct: 181 G 181

[Close]
BLAST of CSPI01G31990 vs. NCBI nr
Match: gi|449442655|ref|XP_004139096.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 278.1 bits (710), Expect = 1.1e-71
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60
           MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN
Sbjct: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60

Query: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120
           AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF
Sbjct: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120

Query: 121 TIVVTGTENVLRQVVEQLNKLVNVIK 147
           TIVVTGTENVLRQVVEQLNKLVNVIK
Sbjct: 121 TIVVTGTENVLRQVVEQLNKLVNVIK 146

[Close]
BLAST of CSPI01G31990 vs. NCBI nr
Match: gi|659085884|ref|XP_008443657.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.2e-71
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVNDN 60
           MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQ+VQKWNRFEFQRLQVSSAAVNDN
Sbjct: 1   MAAAVALCPAPVKAHKPPYSALASRHFFSTSLIVKYQKVQKWNRFEFQRLQVSSAAVNDN 60

Query: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120
           AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF
Sbjct: 61  AVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKALF 120

Query: 121 TIVVTGTENVLRQVVEQLNKLVNVIK 147
           TIVVTGTENVLRQVVEQLNKLVNVIK
Sbjct: 121 TIVVTGTENVLRQVVEQLNKLVNVIK 146

[Close]
BLAST of CSPI01G31990 vs. NCBI nr
Match: gi|645237484|ref|XP_008225227.1| (PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Prunus mume])

HSP 1 Score: 159.5 bits (402), Expect = 5.7e-36
Identity = 97/147 (65.99%), Postives = 107/147 (72.79%), Query Frame = 1 

Query: 1   MAAAVAL-CPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVND 60
           MAAAV+  C  P+   KP    +  RH F  S    +Q+  KW  F  +   VS++   D
Sbjct: 1   MAAAVSSPCSTPLMTQKPSLR-VDIRHGFLKSFDFGHQKPLKWKTFHLKEWVVSAST--D 60

Query: 61  NAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120
           NAV+VTD     IRS V RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL
Sbjct: 61  NAVSVTDPVPSLIRSKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120

Query: 121 FTIVVTGTENVLRQVVEQLNKLVNVIK 147
           FTIVV+GTE VLRQVVEQLNKLVNVIK
Sbjct: 121 FTIVVSGTEKVLRQVVEQLNKLVNVIK 144

[Close]
BLAST of CSPI01G31990 vs. NCBI nr
Match: gi|595874196|ref|XP_007212091.1| (hypothetical protein PRUPE_ppa005063mg [Prunus persica])

HSP 1 Score: 159.5 bits (402), Expect = 5.7e-36
Identity = 97/147 (65.99%), Postives = 107/147 (72.79%), Query Frame = 1 

Query: 1   MAAAVAL-CPAPVKAHKPPYSALASRHFFSTSLIVKYQEVQKWNRFEFQRLQVSSAAVND 60
           MAAAV+  C  P+   KP    +  RH F  S    +Q+  KW  F  + L VS++   D
Sbjct: 1   MAAAVSSPCSTPLMTQKPSLR-VDFRHGFLKSFDFGHQKPIKWKTFHLKELVVSAST--D 60

Query: 61  NAVTVTDSSRPSIRSTVMRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120
           NAV+VTD      RS V RHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL
Sbjct: 61  NAVSVTDPVPSLTRSKVKRHTISVFVGDESGIINRIAGVFARRGYNIESLAVGLNKDKAL 120

Query: 121 FTIVVTGTENVLRQVVEQLNKLVNVIK 147
           FTIVV+GTE VLRQVVEQLNKLVNVIK
Sbjct: 121 FTIVVSGTEKVLRQVVEQLNKLVNVIK 144

The following BLAST results are available for this feature:
BLAST of CSPI01G31990 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ILVH1_ARATH1.5e-3177.89Acetolactate synthase small subunit 1, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH2_ARATH1.3e-2772.22Acetolactate synthase small subunit 2, chloroplastic OS=Arabidopsis thaliana GN=... [more]
ILVH_NICPL1.7e-1989.29Acetolactate synthase small subunit 1, chloroplastic OS=Nicotiana plumbaginifoli... [more]
ILVH_SYNY33.3e-1559.72Acetolactate synthase small subunit OS=Synechocystis sp. (strain PCC 6803 / Kazu... [more]
ILVH_GUITH1.8e-1354.17Acetolactate synthase small subunit OS=Guillardia theta GN=ilvH PE=3 SV=1[more]
BLAST of CSPI01G31990 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M346_CUCSA3.9e-9299.45Uncharacterized protein OS=Cucumis sativus GN=Csa_1G652240 PE=4 SV=1[more]
M5X2J9_PRUPE4.0e-3665.99Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005063mg PE=4 SV=1[more]
B9HHZ9_POPTR7.8e-3261.49Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07820g PE=4 SV=2[more]
A0A0K9R7U2_SPIOL2.5e-3069.09Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101660 PE=4 SV=1[more]
V4W6M4_9ROSI2.5e-3064.12Uncharacterized protein OS=Citrus clementina GN=CICLE_v10015040mg PE=4 SV=1[more]
BLAST of CSPI01G31990 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G16290.18.2e-3377.89 VALINE-TOLERANT 1[more]
AT2G31810.17.2e-2972.22 ACT domain-containing small subunit of acetolactate synthase protein[more]
BLAST of CSPI01G31990 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700211545|gb|KGN66641.1|5.6e-9299.45hypothetical protein Csa_1G652240 [Cucumis sativus][more]
gi|449442655|ref|XP_004139096.1|1.1e-71100.00PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis sa... [more]
gi|659085884|ref|XP_008443657.1|3.2e-7199.32PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis me... [more]
gi|645237484|ref|XP_008225227.1|5.7e-3665.99PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Prunus mum... [more]
gi|595874196|ref|XP_007212091.1|5.7e-3665.99hypothetical protein PRUPE_ppa005063mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
IPR004789Acetalactate_synth_ssu
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0009082branched-chain amino acid biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0016597amino acid binding
GO:0003984acetolactate synthase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009097 isoleucine biosynthetic process
biological_process GO:0009098 leucine biosynthetic process
biological_process GO:0015940 pantothenate biosynthetic process
biological_process GO:0009099 valine biosynthetic process
biological_process GO:0009082 branched-chain amino acid biosynthetic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005948 acetolactate synthase complex
cellular_component GO:0005575 cellular_component
molecular_function GO:0003984 acetolactate synthase activity
molecular_function GO:0016597 amino acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G31990.1CSPI01G31990.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002912ACT domainPFAMPF01842ACTcoord: 79..142
score: 4.9
IPR002912ACT domainPROFILEPS51671ACTcoord: 80..153
score: 1
IPR004789Acetolactate synthase, small subunitTIGRFAMsTIGR00119TIGR00119coord: 77..146
score: 4.9
NoneNo IPR availablePRODOMPD002844coord: 79..150
score: 2.0
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 77..146
score: 3.6
NoneNo IPR availablePANTHERPTHR30239ACETOLACTATE SYNTHASE III, REGULATORY SUBUNITcoord: 33..146
score: 1.0
NoneNo IPR availablePANTHERPTHR30239:SF6ACETOLACTATE SYNTHASE SMALL SUBUNIT 1, CHLOROPLASTICcoord: 33..146
score: 1.0
NoneNo IPR availableunknownSSF55021ACT-likecoord: 74..146
score: 4.58

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G31990Csa1G652240Cucumber (Chinese Long) v2cpicuB001
CSPI01G31990ClCG03G010140Watermelon (Charleston Gray)cpiwcgB041
CSPI01G31990Lsi06G006730Bottle gourd (USVL1VR-Ls)cpilsiB059
CSPI01G31990CsGy1G030990Cucumber (Gy14) v2cgybcpiB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G31990Cucumber (Gy14) v1cgycpiB528
CSPI01G31990Cucurbita maxima (Rimu)cmacpiB084
CSPI01G31990Cucurbita maxima (Rimu)cmacpiB058
CSPI01G31990Cucurbita moschata (Rifu)cmocpiB050
CSPI01G31990Cucurbita moschata (Rifu)cmocpiB078
CSPI01G31990Melon (DHL92) v3.5.1cpimeB044
CSPI01G31990Watermelon (97103) v1cpiwmB013
CSPI01G31990Cucurbita pepo (Zucchini)cpecpiB000
CSPI01G31990Cucurbita pepo (Zucchini)cpecpiB350
CSPI01G31990Melon (DHL92) v3.6.1cpimedB038
CSPI01G31990Silver-seed gourdcarcpiB0571
CSPI01G31990Silver-seed gourdcarcpiB1005
CSPI01G31990Cucumber (Chinese Long) v3cpicucB000
CSPI01G31990Watermelon (97103) v2cpiwmbB035
CSPI01G31990Wax gourdcpiwgoB111