CSPI01G30090 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G30090
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	V-type proton ATPase subunit F
Location	Chr1 : 24597534 .. 24600921 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAAAGAATTAAAATAGAGAGGAATAGTAAAGTTAAGGAGGATTCTTATACCGTAAAAGTGACCTGGTTGAGCGTGCGAGAAACAAAACACAACTATAATTCTCCCTTCTTCTCCTTCGGGAAGTCCAGCGCCGCTTCCAGCTTCGCCTCTTCACTCCGCCGACCGCCCTCACCAACACGCCTCCTCCCTAGCCGTTACCGCCGACCAGATCTGTGCCGCTCGCCGTCACTATCAAAATCCTCCCATCACAATTCTGCCTTCTGGTATTTCTTCTAACTCCATTCCTTCTTCCTCATTTCTTCGATTTTTGCCCGATCTTCGTTCCTAGCTTCACCCCTCTTACTCCTGATCTTCACCCACAATCCTTGATTTTCATCCACGATTACACCTACAATCTTGGAGTTTCAGCTACCATTACTCCCATTTATTAACCTAAAATACATGGTTCGATTTCTGAGCTGTAAATTTTCGATCTCCCGATTTTTAGTTTCATTGCCTAGTTTATTTTTAGTTGTTTGTTTCTGTTCATCTCGCTATGAATTGGAGCTTCAACCCATCTGGGATCACTTTCTCCCGCCTCTGCTCTTGCTTAATTGGATAGGGATTTTCAGTTCAAACTCTTCATTTTGTAATTCCAATATTTTCCTTGTTTTGTTAATATAATTATTTATAATTTATTTTTGTAGTTACATCTCATAAATGGCTGGCAAAGCTCAAATTCCAACCAAGAATTCAGCGCTTATTTCTATGATTGCTGATGAGGTACGCCCAATATATATCCCTATTGCAACAGCTTTTTCTCGGTACCTTAAACTATTAAATTGAATTGTGGTTGAGTAGGAGTTCATACTACGTATTCACCCTTTGATCTTATTATGTGATTTTGCATTTTGGTATTTGGTTTGATTTGTATAGATAAAGCATCCACTTTTGTGATCCTATTGTTATGCGATATGTGTTTTAAGTACCCCGTAAACCTGTGTTTGTTGTCAAAGCGAATCTGCTTGTCAATTACGTTCTCATAAGTACTTTAATCTTCAAAGGTGATCCCTTTATTGTTAGTTTTTCTCTGAAATTCTCAACTTTTCTCAATAAACATTCGTTACACATTTAGTTCCTCCGGTGATTTTAGGTTCATTCTCTTCATTTTGGCATAATTGAGCATCTGGATAATGATAATGATAGGGTCCAACTCCTTCTGTTGTGTTGTGCATTATGAACTATGCATGGATGTCAGTAGTTGTATGTTTAAACTAAATTACCTTCATAATAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTCGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAGTAAGTATCCCTTTGATCCAAATTGCTTGTCACTGTGGGTTTCTATTTCACTTGTAATTCTGATATACTATAATCTATTTCATTAAGCTCACACTACGACTGTATGTCTAAATCCAGCAAAACTCCCCATTGTTGAAAATCGTTATTACTTAAGAATTAAGATGGTCTGTTTTGAGGTTTTCATAAAAAATTGTCCAGTGATACAAATGAAATTCTGAATCAGCTTTCAAAAATGTTTCTCTATTTTTAATAAGGAAGAATTTCATTAATGACATGAATTTACAAAAGAGGGACAAAGCCCCCTATCTAAGGAGACATAAAGTCTCTCAATTTGGAAAGAAGAAAATTTTAGCTATTAGTGGTGAAAGAGTGGAGAGCGTTTAGACGATGAAACAACCAAAAGAACTATTGCTTAAAAAATTTGTGCAATAAGAGATTCTTATCTTGAAAAATCTGACGGTTCCTTCCTTAGCAAATAGTCCAATAGAAAGCTTCCGGTGACATTCATCTGTAGGAGTGTTTTCTGCATTTTGAATGGGCGCCTCCCAAGTGTAAGAGAGAGGGTAAGAGTAGAGTAGGGTCATTTGGAAAAGCAGTGCACCATCTGAAAGTTTTCAGAAAAATAACCCAAAATAAACATGTGGCCTCTCATTCAAGCTATGTTGAGTAATCTCCCTACATATTATCTCTCCCTCTTCAAACTACCAAGTAAAGTAAGCTCACTTGATTGTAAAGCACTTCTTGTGGAAGGGGTAAGAAGAAGGGTCTGATCTACACCACCATCGTTGGCTGGGATAAAATTACTACTACTTTCATCCATGGTGCTTTTAATTGGAATCTAGCTTGTATTATACAAAATCCCCAATGAAAGTTCGGCAAAAAACATATGATATCCTTGTCTTGATCCACAGAGGGGCACAATAAAAAATCTGCAGTAGTAAATTGATCTTCTTGTAAGGATAGCAGTTTTTTTATATTAATCTTTCTAATGAAGTGTATTTAAAATATTTTCATAGACTATTGTGCTCATGTCTTGGAGACATGTTTGGTTTGATGTCACATCGTCAATAGATCAATAGTAGCTACTAATGATCCTAATGTTATGATTGAACCATAAAGATTGATATTTGATAGGAATCTGTTCGTTTTATTCAGCTGTTTTGTGCGATTACATCTTTTTTTTGTCTCAAATGTTTGAACTTTTAATGTCTCAGAGACGACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTAAGTTGTTTTTTGAAATCCCTTTCTTTCTAATGCAAGTGACATATGACTTGTTTTATTATTATTATTCTTAATACTTATTTTTTTGAGTTTTAGGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGATCCTGCTCATGATTCAGTTCTTTCACGAGTAAAGAACCTGTTTTCTACCGAATCGGTGGCATCCGGGAGGTATTAAAATGATATTGTAACTTTTGTCCCAACTCTTTATGAAGTCATCCACCTTTATTCAAACATGCTGCATTTTGCGTTCCCGCTTTCTGCCTTGAATTTTATTTTGCAATGATTTTATTCATATCAATCACTCGAATAAAACTCGGAAAATAGATGGCGTCAGAGGAGCTCGTGGTGTCCAAGCACCTTAGAATGCCACTTTTTTTTTTTTTTTTACTGTACCTTAATTCCTATATTTACAGCAACTTGAGACATTACATCTACATCTATCTTGTTCTCTTGGTGCATGTATGCCAAAAAACCAAATACTGTTGTAATTACTCTTCTATTTGAGGCTACTCTTGGAGATTGAAGAACTACTTGTTCTTATTGCCTTCTTGAATCTTTTGTTAGCTTTCAATCTACGTTATTTAGTGGAAATGCTTGTCAGATTCTGGAATTTGTGTTTACTTTGCTGGAACTCCTTAGCACCCACAA

mRNA sequence

ATGGCTGGCAAAGCTCAAATTCCAACCAAGAATTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTCGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACGACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGATCCTGCTCATGATTCAGTTCTTTCACGAGTAAAGAACCTGTTTTCTACCGAATCGGTGGCATCCGGGAGGTATTAA

Coding sequence (CDS)

ATGGCTGGCAAAGCTCAAATTCCAACCAAGAATTCAGCGCTTATTTCTATGATTGCTGATGAGGATACGGTGGTTGGATTTCTTCTTGCTGGAGTTGGTAATGTCGACCTGCGAAGAAAAACTAATTACCTTATAGTGGACTCAAAGACGACTGTTAAACAAATTGAAGATGCTTTCAAAGAGTTCACTACAAGGGAGGATATTGCAATAGTGATGATTAGTCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTATAACAAGCCAATTCCTGCAATATTGGAGATTCCTTCCAAGGATCATCCATATGATCCTGCTCATGATTCAGTTCTTTCACGAGTAAAGAACCTGTTTTCTACCGAATCGGTGGCATCCGGGAGGTATTAA

Homology

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BLAST of CSPI01G30090 vs. Swiss-Prot
Match: VATF_ARATH (V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 5.5e-57
Identity = 107/126 (84.92%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVA 127
           S ESV+
Sbjct: 121 SAESVS 126

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BLAST of CSPI01G30090 vs. Swiss-Prot
Match: VATF_DICDI (V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.6e-32
Identity = 66/112 (58.93%), Postives = 88/112 (78.57%), Query Frame = 1


Query: 12  SALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIV 71
           +AL+++I DED V GFLLAGVG  D ++  N+L+VDSKT+  +IE AFK FTTR DIAI+
Sbjct: 9   TALVAVIGDEDVVTGFLLAGVGQKDKKKNENFLVVDSKTSQAKIETAFKSFTTRNDIAII 68

Query: 72  MISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTE 124
           MI+Q VA+ IR+L+D Y++ IP ILEIPSKDHPYDP  DSV+ +VK +  ++
Sbjct: 69  MITQKVADEIRYLIDEYHQVIPTILEIPSKDHPYDPKKDSVMLKVKKMTGSD 120

[Close]

BLAST of CSPI01G30090 vs. Swiss-Prot
Match: VATF_CAEEL (Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.1e-32
Identity = 63/110 (57.27%), Postives = 90/110 (81.82%), Query Frame = 1


Query: 14  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 73
           ++++I DEDTVVGFLL GVG ++  RK NYLIVD +TTV++IE+AF  F  R+DIAI++I
Sbjct: 9   ILAVIGDEDTVVGFLLGGVGELNKARKPNYLIVDKQTTVQEIEEAFNGFCARDDIAIILI 68

Query: 74  SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTE 124
           +Q++A MIR+ VD++ + IPA+LEIPSK+ PYDP+ DS+L+R + LF+ E
Sbjct: 69  NQHIAEMIRYAVDNHTQSIPAVLEIPSKEAPYDPSKDSILNRARGLFNPE 118

[Close]

BLAST of CSPI01G30090 vs. Swiss-Prot
Match: VATF_ANOGA (V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 1.2e-30
Identity = 62/125 (49.60%), Postives = 85/125 (68.00%), Query Frame = 1


Query: 5   AQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTT 64
           A +      LIS+I DEDT VGFLL GVG ++  R  N+++VD  T V +IED FK F  
Sbjct: 2   ALLSAMKGKLISVIGDEDTCVGFLLGGVGEINKNRHPNFMVVDKNTAVSEIEDCFKRFIK 61

Query: 65  REDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTES 124
           R+DI I++I+Q  A +IR ++DS+  P PA+LEIPSKDHPYD + DS+L R K +F+ E 
Sbjct: 62  RDDIDIILINQNYAELIRHVIDSHTAPTPAVLEIPSKDHPYDASKDSILRRAKGMFNPED 121

Query: 125 VASGR 130
           + + R
Sbjct: 122 MIANR 126

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BLAST of CSPI01G30090 vs. Swiss-Prot
Match: VATF_RAT (V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.5e-30
Identity = 57/112 (50.89%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 14  LISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTTREDIAIVMI 73
           LI++I DEDTV GFLL G+G ++  R  N+L+V+  TT+ +IED F++F  R+DI I++I
Sbjct: 7   LIAVIGDEDTVTGFLLGGIGELNKNRHPNFLVVEKDTTINEIEDTFRQFLNRDDIGIILI 66

Query: 74  SQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLFSTESV 126
           +QY+A M+R  +D++ + IPA+LEIPSK+HPYD A DS+L R K +F+ E +
Sbjct: 67  NQYIAEMVRHALDAHQRSIPAVLEIPSKEHPYDAAKDSILRRAKGMFTAEDL 118

[Close]

BLAST of CSPI01G30090 vs. TrEMBL
Match: A0A0A0LX69_CUCSA (V-type proton ATPase subunit F OS=Cucumis sativus GN=Csa_1G611810 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 6.5e-65
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGRY 131
           STESVASGRY
Sbjct: 121 STESVASGRY 130

[Close]

BLAST of CSPI01G30090 vs. TrEMBL
Match: V4T9F3_9ROSI (V-type proton ATPase subunit F OS=Citrus clementina GN=CICLE_v10002833mg PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-60
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. TrEMBL
Match: A0A067E4V9_CITSI (V-type proton ATPase subunit F OS=Citrus sinensis GN=CISIN_1g037034mg PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.2e-60
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. TrEMBL
Match: A5B4N7_VITVI (V-type proton ATPase subunit F OS=Vitis vinifera GN=VIT_05s0062g00210 PE=3 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 8.3e-60
Identity = 118/129 (91.47%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+AQIPTK+SALI+MIADEDT+ GFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTITGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTT+EDIAI++ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFTTKEDIAIILISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. TrEMBL
Match: C6SVI1_SOYBN (V-type proton ATPase subunit F OS=Glycine max GN=GLYMA_05G135300 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 1.4e-59
Identity = 118/129 (91.47%), Postives = 125/129 (96.90%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MA + QIPT NSALI+MIADEDTVVGFLLAGVGNVD+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRVQIPTNNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTRED+AIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFTTREDVAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVASGR 130
           +TESVASGR
Sbjct: 121 NTESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. TAIR10
Match: AT4G02620.1 (AT4G02620.1 vacuolar ATPase subunit F family protein)

HSP 1 Score: 221.5 bits (563), Expect = 3.1e-58
Identity = 107/126 (84.92%), Postives = 121/126 (96.03%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+A IP +NSALI+MIADEDTVVGFL+AGVGNVD+RRKTNYLIVDSKTTV+QIEDAFK
Sbjct: 1   MAGRATIPARNSALIAMIADEDTVVGFLMAGVGNVDIRRKTNYLIVDSKTTVRQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EF+ R+DIAI+++SQY+ANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFSARDDIAIILLSQYIANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVA 127
           S ESV+
Sbjct: 121 SAESVS 126

[Close]

BLAST of CSPI01G30090 vs. NCBI nr
Match: gi|449466929|ref|XP_004151178.1| (PREDICTED: V-type proton ATPase subunit F [Cucumis sativus])

HSP 1 Score: 254.6 bits (649), Expect = 9.4e-65
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF
Sbjct: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGRY 131
           STESVASGRY
Sbjct: 121 STESVASGRY 130

[Close]

BLAST of CSPI01G30090 vs. NCBI nr
Match: gi|1012187115|ref|XP_015969737.1| (PREDICTED: V-type proton ATPase subunit F-like [Arachis duranensis])

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-60
Identity = 122/129 (94.57%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. NCBI nr
Match: gi|1012103251|ref|XP_015957950.1| (PREDICTED: V-type proton ATPase subunit F [Arachis duranensis])

HSP 1 Score: 240.0 bits (611), Expect = 2.4e-60
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGNVD+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNVDIRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. NCBI nr
Match: gi|567880745|ref|XP_006432931.1| (hypothetical protein CICLE_v10002833mg [Citrus clementina])

HSP 1 Score: 239.6 bits (610), Expect = 3.1e-60
Identity = 121/129 (93.80%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MAG+AQIPTK+SALI+MIADEDTV GFLLAGVGNVDLRRKTNYLIVDSKTTVK IEDAFK
Sbjct: 1   MAGRAQIPTKSSALIAMIADEDTVTGFLLAGVGNVDLRRKTNYLIVDSKTTVKAIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTT+EDIAIV+ISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF
Sbjct: 61  EFTTKEDIAIVLISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

[Close]

BLAST of CSPI01G30090 vs. NCBI nr
Match: gi|1021496452|ref|XP_016191262.1| (PREDICTED: V-type proton ATPase subunit F [Arachis ipaensis])

HSP 1 Score: 239.6 bits (610), Expect = 3.1e-60
Identity = 120/129 (93.02%), Postives = 126/129 (97.67%), Query Frame = 1


Query: 1   MAGKAQIPTKNSALISMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFK 60
           MA +AQIPTKNSALI+MIADEDTVVGFLLAGVGN+D+RRKTNYLIVDSKTTVKQIEDAFK
Sbjct: 1   MANRAQIPTKNSALIAMIADEDTVVGFLLAGVGNIDIRRKTNYLIVDSKTTVKQIEDAFK 60

Query: 61  EFTTREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSVLSRVKNLF 120
           EFTTREDIAIV+ISQYVANMIRFLVDSYNKP+PAILEIPSKDHPYDPAHDSVLSRVK LF
Sbjct: 61  EFTTREDIAIVLISQYVANMIRFLVDSYNKPVPAILEIPSKDHPYDPAHDSVLSRVKYLF 120

Query: 121 STESVASGR 130
           S ESVASGR
Sbjct: 121 SAESVASGR 129

The following BLAST results are available for this feature:

BLAST of CSPI01G30090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VATF_ARATH	5.5e-57	84.92	V-type proton ATPase subunit F OS=Arabidopsis thaliana GN=VHA-F PE=2 SV=1	[more]
VATF_DICDI	3.6e-32	58.93	V-type proton ATPase subunit F OS=Dictyostelium discoideum GN=vatF PE=3 SV=1	[more]
VATF_CAEEL	6.1e-32	57.27	Probable V-type proton ATPase subunit F OS=Caenorhabditis elegans GN=vha-9 PE=3 ...	[more]
VATF_ANOGA	1.2e-30	49.60	V-type proton ATPase subunit F OS=Anopheles gambiae GN=Vha14 PE=2 SV=2	[more]
VATF_RAT	1.5e-30	50.89	V-type proton ATPase subunit F OS=Rattus norvegicus GN=Atp6v1f PE=1 SV=1	[more]

BLAST of CSPI01G30090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX69_CUCSA	6.5e-65	100.00	V-type proton ATPase subunit F OS=Cucumis sativus GN=Csa_1G611810 PE=3 SV=1	[more]
V4T9F3_9ROSI	2.2e-60	93.80	V-type proton ATPase subunit F OS=Citrus clementina GN=CICLE_v10002833mg PE=3 SV...	[more]
A0A067E4V9_CITSI	2.2e-60	93.80	V-type proton ATPase subunit F OS=Citrus sinensis GN=CISIN_1g037034mg PE=3 SV=1	[more]
A5B4N7_VITVI	8.3e-60	91.47	V-type proton ATPase subunit F OS=Vitis vinifera GN=VIT_05s0062g00210 PE=3 SV=1	[more]
C6SVI1_SOYBN	1.4e-59	91.47	V-type proton ATPase subunit F OS=Glycine max GN=GLYMA_05G135300 PE=2 SV=1	[more]

BLAST of CSPI01G30090 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G02620.1	3.1e-58	84.92	vacuolar ATPase subunit F family protein	[more]

BLAST of CSPI01G30090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466929\|ref\|XP_004151178.1\|	9.4e-65	100.00	PREDICTED: V-type proton ATPase subunit F [Cucumis sativus]	[more]
gi\|1012187115\|ref\|XP_015969737.1\|	1.4e-60	94.57	PREDICTED: V-type proton ATPase subunit F-like [Arachis duranensis]	[more]
gi\|1012103251\|ref\|XP_015957950.1\|	2.4e-60	93.80	PREDICTED: V-type proton ATPase subunit F [Arachis duranensis]	[more]
gi\|567880745\|ref\|XP_006432931.1\|	3.1e-60	93.80	hypothetical protein CICLE_v10002833mg [Citrus clementina]	[more]
gi\|1021496452\|ref\|XP_016191262.1\|	3.1e-60	93.02	PREDICTED: V-type proton ATPase subunit F [Arachis ipaensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005772	ATPase_V1-cplx_fsu_euk
IPR008218	ATPase_V1-cplx_f_g_su
IPR005772	ATPase_V1-cplx_fsu_euk
IPR008218	ATPase_V1-cplx_f_g_su

Vocabulary: **Cellular Component**
Term	Definition
GO:0033180	proton-transporting V-type ATPase, V1 domain
GO:0033180	proton-transporting V-type ATPase, V1 domain

Vocabulary: **Molecular Function**
Term	Definition
GO:0046961	proton-transporting ATPase activity, rotational mechanism
GO:0046961	proton-transporting ATPase activity, rotational mechanism

Vocabulary: **Biological Process**
Term	Definition
GO:0015991	ATP hydrolysis coupled proton transport
GO:0034220	ion transmembrane transport
GO:0015991	ATP hydrolysis coupled proton transport
GO:0034220	ion transmembrane transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0033180	proton-transporting V-type ATPase, V1 domain
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G30090.1	CSPI01G30090.1	mRNA
CSPI01G30090.2	CSPI01G30090.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	PIR	PIRSF015945	V-ATP_synth_F	coord: 3..123 score: 2.0
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	PANTHER	PTHR13861	VACUOLAR ATP SYNTHASE SUBUNIT F	coord: 1..129 score: 7.8E
IPR005772	ATPase, V1 complex, subunit F, eukaryotic	TIGRFAMs	TIGR01101	TIGR01101	coord: 11..124 score: 1.6
IPR008218	ATPase, V1 complex, subunit F	GENE3D	G3DSA:3.40.50.10580		coord: 14..120 score: 4.0
IPR008218	ATPase, V1 complex, subunit F	PFAM	PF01990	ATP-synt_F	coord: 15..116 score: 1.8
IPR008218	ATPase, V1 complex, subunit F	unknown	SSF159468	AtpF-like	coord: 15..118 score: 4.97
None	No IPR available	PANTHER	PTHR13861:SF4	SUBFAMILY NOT NAMED	coord: 1..129 score: 7.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G30090	Csa1G611810	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G30090	MELO3C015218	Melon (DHL92) v3.5.1	cpimeB042
CSPI01G30090	MELO3C015218.2	Melon (DHL92) v3.6.1	cpimedB036
CSPI01G30090	CsaV3_1G042520	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G30090	Cucsa.143160	Cucumber (Gy14) v1	cgycpiB208
CSPI01G30090	CsGy1G029420	Cucumber (Gy14) v2	cgybcpiB002

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G30090	Bottle gourd (USVL1VR-Ls)	cpilsiB003
CSPI01G30090	Bottle gourd (USVL1VR-Ls)	cpilsiB045
CSPI01G30090	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G30090	Cucumber (Gy14) v2	cgybcpiB301
CSPI01G30090	Melon (DHL92) v3.6.1	cpimedB035
CSPI01G30090	Melon (DHL92) v3.6.1	cpimedB064
CSPI01G30090	Silver-seed gourd	carcpiB0199
CSPI01G30090	Silver-seed gourd	carcpiB0506
CSPI01G30090	Silver-seed gourd	carcpiB0558
CSPI01G30090	Silver-seed gourd	carcpiB0954
CSPI01G30090	Cucumber (Chinese Long) v3	cpicucB064
CSPI01G30090	Watermelon (97103) v2	cpiwmbB028
CSPI01G30090	Watermelon (97103) v2	cpiwmbB043
CSPI01G30090	Wax gourd	cpiwgoB021
CSPI01G30090	Wax gourd	cpiwgoB074
CSPI01G30090	Wax gourd	cpiwgoB086
CSPI01G30090	Wild cucumber (PI 183967)	cpicpiB054
CSPI01G30090	Cucurbita maxima (Rimu)	cmacpiB084
CSPI01G30090	Cucurbita maxima (Rimu)	cmacpiB058
CSPI01G30090	Cucurbita maxima (Rimu)	cmacpiB352
CSPI01G30090	Cucurbita maxima (Rimu)	cmacpiB543
CSPI01G30090	Cucurbita maxima (Rimu)	cmacpiB583
CSPI01G30090	Cucurbita moschata (Rifu)	cmocpiB050
CSPI01G30090	Cucurbita moschata (Rifu)	cmocpiB078
CSPI01G30090	Cucurbita moschata (Rifu)	cmocpiB345
CSPI01G30090	Cucurbita moschata (Rifu)	cmocpiB534
CSPI01G30090	Cucurbita moschata (Rifu)	cmocpiB571
CSPI01G30090	Cucumber (Chinese Long) v2	cpicuB054
CSPI01G30090	Melon (DHL92) v3.5.1	cpimeB039
CSPI01G30090	Watermelon (Charleston Gray)	cpiwcgB049
CSPI01G30090	Watermelon (97103) v1	cpiwmB022
CSPI01G30090	Watermelon (97103) v1	cpiwmB076
CSPI01G30090	Cucurbita pepo (Zucchini)	cpecpiB268
CSPI01G30090	Cucurbita pepo (Zucchini)	cpecpiB350
CSPI01G30090	Cucurbita pepo (Zucchini)	cpecpiB655
CSPI01G30090	Cucurbita pepo (Zucchini)	cpecpiB705