CSPI01G29340 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTCAAGATTTCGAATCAATATCCAAACACACCAAAATCCCTTTTGGAAAATATATAAATATCTTATGAAGAAAATGCCTGCAACAGAACACATCCGAACAAAGCTTGAATTACAATTACCTGAGAAGAAAGTCGAAGCGCAACGGCCATGGATCCTTCTTCTTCTGCTAAAAAATTCGAGGAATTCGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCGTGTTCTCGTCGTTCACCTCTCAGGTTTCATCATATTCCCCCTAAGTCTATTTCATTTTTAATTTTACGTACAGAGGGATTGAGAAATGGACCTTAAAATAGAAAGAATTTAACTTTTCATTACACTTCCAATTGTAAAGTTGGAAAGTCTAATTTTAATAAGAATTACCTTTTCGAAGTTTTAAACCATAATTAGGCTATTGTTATAGTTACCAATACGTTTTTTTTTTTTTTTTTTTTTGCAATCGAAAAAGAAATTAAACACTACATTTAAATAAGAGTTACATTTTTGGCCAAATTTAAAAATAATTACAATTTTAATTATTAGTAGATTTTCCCTTCAAATTTCTTGATCATTTATTTTTAAAAAAATGACATTTAAGTTTTCTTTCCTTTCTTTGTTGAAAATAATAAATTTTGATTTTGAAGTTTAAAGTTTTGAATTCGATAACATAAAAATAAAAGAAAAATTATTGTAAACTAGGAATATAACAAAATATAATTTTAATTTTTTTTTTTTTTACATATATGAATATTATATCTGAAAATGTCCCATAAAATAAAATAAAAAATCGCAAGGTTATACTTGTAATTACATTTTAAATTTTTAAAAATGGTAAAAAAAAGTGGCTGTAAGTATATATATATATATATATTTGTTAGGGGTATTCTCGTCCATCAAAGTTTAATTTTATCATTTTACCTTCCAAAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTAACGTCCACCGGAAAGCTGAGAGTCTCCGGCGAACGGAAGCTCAGCAGCGGCAAGTGGCTTCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCAGACACCGACAATATCTCTGCCAAATTGGAGCAAGGCATTCTCTACGTGAAACAGCCCAAGAAACCCTCCGCCACCTCTTCCAACATCCCACCGGTTCAGCAACCCAAGCCCAAGGCTCAATCCCAACCGCCGCCCCCCGCCACAAAACCCACTGCCGACCCACCAACTGTTCGACCAAATACTCCAAAGAGCCAAAACGAGAGACCCGAGCCTCCAAAGCCAGCTGCTACAGAAACCACTGTCGCCCCACCAACTGTTGGACCAAATGCCCCAGAGAGCCAAAACGAAAGAGCCCAAATTCCATACAAAAAAACCAATGTCAAAAACTACGCACCAAGCCAAAACGACAGGCCTCAATCGCAAGCAAGTGGGAAACAAATCCCCACACCTCCAAAGCCAGAGAAGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGAGAAGACATCTTCCATGGGCAGTGGACAGCCAGTTGAAGATTTAGGTAAGAAGGAAAAAACAGAGGAGAAGGGAAAAACACATACAAAACTACGGGATGCTTTGGAGAAGACAAGAGAAGAAGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGAGGAGAAGGCTGAGGAGGGGAAAGAAGAAGTTGGAGAAGAGAAGAGGAGGAGGAGGAAGAGAAGGAGTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAGGGTACAAACAGGTTATTGATGTTGTGGTGAAGGAATTAAGAACAAATATGGTGACTTTGGCTTTGGGGATTGCTGCTTTTGTGGTTCTGTATCTGAATCTTTCAAAGAACGGTCACATGGAGGAAGAGTTGTGAAGAAGGTATGAATGAATGAAATTCTAATTTATGAGTTAACAATCAAATATGTGAAAGAGATTACTCAAAGAGACATGAAATAAAATTGTTATATTTGCAACA ATGGATCCTTCTTCTTCTGCTAAAAAATTCGAGGAATTCGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCGTGTTCTCGTCGTTCACCTCTCAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTAACGTCCACCGGAAAGCTGAGAGTCTCCGGCGAACGGAAGCTCAGCAGCGGCAAGTGGCTTCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCAGACACCGACAATATCTCTGCCAAATTGGAGCAAGGCATTCTCTACGTGAAACAGCCCAAGAAACCCTCCGCCACCTCTTCCAACATCCCACCGGTTCAGCAACCCAAGCCCAAGGCTCAATCCCAACCGCCGCCCCCCGCCACAAAACCCACTGCCGACCCACCAACTGTTCGACCAAATACTCCAAAGAGCCAAAACGAGAGACCCGAGCCTCCAAAGCCAGCTGCTACAGAAACCACTGTCGCCCCACCAACTGTTGGACCAAATGCCCCAGAGAGCCAAAACGAAAGAGCCCAAATTCCATACAAAAAAACCAATGTCAAAAACTACGCACCAAGCCAAAACGACAGGCCTCAATCGCAAGCAAGTGGGAAACAAATCCCCACACCTCCAAAGCCAGAGAAGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGAGAAGACATCTTCCATGGGCAGTGGACAGCCAGTTGAAGATTTAGGTAAGAAGGAAAAAACAGAGGAGAAGGGAAAAACACATACAAAACTACGGGATGCTTTGGAGAAGACAAGAGAAGAAGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGAGGAGAAGGCTGAGGAGGGGAAAGAAGAAGTTGGAGAAGAGAAGAGGAGGAGGAGGAAGAGAAGGAGTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAGGGTACAAACAGGTTATTGATGTTGTGGTGAAGGAATTAAGAACAAATATGGTGACTTTGGCTTTGGGGATTGCTGCTTTTGTGGTTCTGTATCTGAATCTTTCAAAGAACGGTCACATGGAGGAAGAGTTGTGA ATGGATCCTTCTTCTTCTGCTAAAAAATTCGAGGAATTCGAGCCGCGATTTGATTGGGTTGATCATCCTGATTCTCGTGTTCTCGTCGTTCACCTCTCAGGTTTCAGAAGCAACCAACTGAAAGTTCAGGTAACGTCCACCGGAAAGCTGAGAGTCTCCGGCGAACGGAAGCTCAGCAGCGGCAAGTGGCTTCGATTCCAAAAGGAAATCGATATCCCCGCCGACGCAGACACCGACAATATCTCTGCCAAATTGGAGCAAGGCATTCTCTACGTGAAACAGCCCAAGAAACCCTCCGCCACCTCTTCCAACATCCCACCGGTTCAGCAACCCAAGCCCAAGGCTCAATCCCAACCGCCGCCCCCCGCCACAAAACCCACTGCCGACCCACCAACTGTTCGACCAAATACTCCAAAGAGCCAAAACGAGAGACCCGAGCCTCCAAAGCCAGCTGCTACAGAAACCACTGTCGCCCCACCAACTGTTGGACCAAATGCCCCAGAGAGCCAAAACGAAAGAGCCCAAATTCCATACAAAAAAACCAATGTCAAAAACTACGCACCAAGCCAAAACGACAGGCCTCAATCGCAAGCAAGTGGGAAACAAATCCCCACACCTCCAAAGCCAGAGAAGGCAACCGGAGCACCCGCGAGGATCCCAAAACCCGAGAAGACATCTTCCATGGGCAGTGGACAGCCAGTTGAAGATTTAGGTAAGAAGGAAAAAACAGAGGAGAAGGGAAAAACACATACAAAACTACGGGATGCTTTGGAGAAGACAAGAGAAGAAGGTAAAGAAGAAGAAGGTGGGTCAAAAATGGAGGAGAAGGCTGAGGAGGGGAAAGAAGAAGTTGGAGAAGAGAAGAGGAGGAGGAGGAAGAGAAGGAGTGAGGAAATGGGAGAAGAGAGTGGAAGGTTGAGAAGAAGAGAAGGGTACAAACAGGTTATTGATGTTGTGGTGAAGGAATTAAGAACAAATATGGTGACTTTGGCTTTGGGGATTGCTGCTTTTGTGGTTCTGTATCTGAATCTTTCAAAGAACGGTCACATGGAGGAAGAGTTGTGA
BLAST of CSPI01G29340 vs. Swiss-Prot
Match: RTM2B_ARATH (Inactive protein RESTRICTED TEV MOVEMENT 2 OS=Arabidopsis thaliana GN=RTM2 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09 Identity = 32/108 (29.63%), Postives = 59/108 (54.63%), Query Frame = 1
BLAST of CSPI01G29340 vs. Swiss-Prot
Match: HSP41_PEA (22.7 kDa class IV heat shock protein OS=Pisum sativum GN=HSP22.7 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.3e-07 Identity = 29/86 (33.72%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of CSPI01G29340 vs. Swiss-Prot
Match: HSP41_SOYBN (22.0 kDa class IV heat shock protein OS=Glycine max GN=HSP22.0 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 2.2e-07 Identity = 30/86 (34.88%), Postives = 47/86 (54.65%), Query Frame = 1
BLAST of CSPI01G29340 vs. Swiss-Prot
Match: HSP11_SOLLC (17.8 kDa class I heat shock protein OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 4.9e-07 Identity = 37/119 (31.09%), Postives = 57/119 (47.90%), Query Frame = 1
BLAST of CSPI01G29340 vs. Swiss-Prot
Match: HSP22_ARATH (22.0 kDa heat shock protein OS=Arabidopsis thaliana GN=HSP22.0 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.9e-06 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of CSPI01G29340 vs. TrEMBL
Match: A0A0A0M2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600110 PE=3 SV=1) HSP 1 Score: 609.4 bits (1570), Expect = 2.8e-171 Identity = 337/347 (97.12%), Postives = 341/347 (98.27%), Query Frame = 1
BLAST of CSPI01G29340 vs. TrEMBL
Match: A0A0A0LWW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600100 PE=3 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 7.3e-119 Identity = 270/361 (74.79%), Postives = 287/361 (79.50%), Query Frame = 1
BLAST of CSPI01G29340 vs. TrEMBL
Match: A0A0A0LZR6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600120 PE=3 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 5.7e-79 Identity = 196/315 (62.22%), Postives = 216/315 (68.57%), Query Frame = 1
BLAST of CSPI01G29340 vs. TrEMBL
Match: A0A0A0LX62_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G600080 PE=4 SV=1) HSP 1 Score: 242.3 bits (617), Expect = 9.1e-61 Identity = 187/375 (49.87%), Postives = 229/375 (61.07%), Query Frame = 1
BLAST of CSPI01G29340 vs. TrEMBL
Match: A0A0J8BYF2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g171580 PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17 Identity = 58/146 (39.73%), Postives = 88/146 (60.27%), Query Frame = 1
BLAST of CSPI01G29340 vs. TAIR10
Match: AT2G27140.1 (AT2G27140.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 85.9 bits (211), Expect = 5.5e-17 Identity = 69/214 (32.24%), Postives = 104/214 (48.60%), Query Frame = 1
BLAST of CSPI01G29340 vs. TAIR10
Match: AT5G20970.1 (AT5G20970.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 83.2 bits (204), Expect = 3.6e-16 Identity = 55/140 (39.29%), Postives = 74/140 (52.86%), Query Frame = 1
BLAST of CSPI01G29340 vs. TAIR10
Match: AT1G54400.1 (AT1G54400.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 61.6 bits (148), Expect = 1.1e-09 Identity = 31/88 (35.23%), Postives = 48/88 (54.55%), Query Frame = 1
BLAST of CSPI01G29340 vs. TAIR10
Match: AT4G10250.1 (AT4G10250.1 HSP20-like chaperones superfamily protein) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 28/92 (30.43%), Postives = 49/92 (53.26%), Query Frame = 1
BLAST of CSPI01G29340 vs. TAIR10
Match: AT5G59720.1 (AT5G59720.1 heat shock protein 18.2) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-07 Identity = 32/107 (29.91%), Postives = 53/107 (49.53%), Query Frame = 1
BLAST of CSPI01G29340 vs. NCBI nr
Match: gi|778665351|ref|XP_004144143.2| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucumis sativus]) HSP 1 Score: 609.4 bits (1570), Expect = 4.1e-171 Identity = 337/347 (97.12%), Postives = 341/347 (98.27%), Query Frame = 1
BLAST of CSPI01G29340 vs. NCBI nr
Match: gi|659100303|ref|XP_008451026.1| (PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 529.6 bits (1363), Expect = 4.1e-147 Identity = 301/355 (84.79%), Postives = 316/355 (89.01%), Query Frame = 1
BLAST of CSPI01G29340 vs. NCBI nr
Match: gi|659100301|ref|XP_008451025.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 521.5 bits (1342), Expect = 1.1e-144 Identity = 301/365 (82.47%), Postives = 316/365 (86.58%), Query Frame = 1
BLAST of CSPI01G29340 vs. NCBI nr
Match: gi|700211274|gb|KGN66370.1| (hypothetical protein Csa_1G600100 [Cucumis sativus]) HSP 1 Score: 435.3 bits (1118), Expect = 1.1e-118 Identity = 270/361 (74.79%), Postives = 287/361 (79.50%), Query Frame = 1
BLAST of CSPI01G29340 vs. NCBI nr
Match: gi|659100306|ref|XP_008451028.1| (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo]) HSP 1 Score: 412.1 bits (1058), Expect = 9.5e-112 Identity = 241/306 (78.76%), Postives = 256/306 (83.66%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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