CSPI01G29210 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G29210
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	RNA binding protein, putative
Location	Chr1 : 23675111 .. 23680978 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTACTTGATTACTCTCTCCCTTTTGATATTTTTTTTGCCAATCTCTTTATTTTTCCTATAATTTCTCCTTCTTTAATCCCTTCTCTTCTCATTCTCTTCCTCTTCACGCCGCCTCTCTTCTTGTTCTTGTTCTTCTTCTTCTACACCTACACCCCTTTTTCCTATTCTATTCGATCATTCTTGGAAACCCCACATTTTCTTTGATCAAAAAACTCTTCCTTTTCCTCTACATTTTACCCCCTTTTTCCTTCACTGATACGTGGGCCTTCTTTATTTTCTCTAATCGCCTATTGGGTTAGTTTTGATTCATCCCTTTTCGTTTTTTCTTCCCTTTGTGTTTTTGGAGCTTTTGCGATACTGATTTTTTTGATCAAGTTGTGTTTCTTTAGGACCCTTTTTCTGATTTTGATGATCGAAGGTTATTTCGGTGTGTTTTGCGATTTTTCTATGTCTATTTATTTACTGCATTGGTTGTTTTGATTGTTTCGGTACGGTGTTTTTGGTTGATTTTGTTTCTTTTTATTTTTTTGCTTCTTGTCCTTGTGTAGAAGTTTGACTGATATTCAGAAGGATTTTGTTCTTGTTTCTTTTAATCTCTATGAATGGTCTGTTTTCACTGTGATTGAAGGGCTCTATTAGTGAGATCGTCACAAATTTGTGGGTTAGGTGATTTGGATTGTGATTGTTGGCTTTTGTTCAATATTTTCATTGTTCTTTATCTGGGTTGTGGGATAGCAGTGATTGGTTGCTTTTGTACAATGTAGGTTGGAGATTTGTTCAAATTATGATCTGATCTTTGATGCTAAAAAGTGTGTGTGTTTTGCTGCTTGGCAGGCGAAGATAGAAACGTTTGTGTGTCACTGTATCATTTATTCTTTAAGTGAGGGGTTTGCTTTTGTTACCTTTTGGTACAGTGAGTTTTTTGTGAGTTAGTTACAACAATGGAAGAGATGCCTAATGAAAATGAATTCGAAGACATTGCGAAATATATTGGCAATCAGATTCCTAATGTTGCATCTGGTAATGCAGATCCTGAAGGTTTGTCATCAATATCTGTGAGTTCGTATGAAGGATCTTCCATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCGGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAGTTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAGACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGTATGCTCTTTTCTTTTCATTTCTGATACCCCTCATGGATTAAACACGAGCATTCGTCAAAGTCATTGTATTTCCTTTTATTGTTTATTAATTCTCTTCCAATATCTTCTATCTTAACGACAGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGGTGAGGATTCTATTTTCTAGATCTGTTATTTTGACTTTGTCTGTTTCAAGCGTGAAGGCACTCACCTAACCTGTTGTTTAGAGTTTAGGCAAAGAACACTATCGGTATCTGTTTAATCATAGGGAATTGTAAAATAAATTCCATGTGTGATGCAACAAAGTAATATTTTTATTTGAAATTTTCTTCCCTTTTAGTTCATCTTTCTGGGGATCTTTGCTATTCGCTTTCAGATTATTCCTTTGGTTATTTCCAATTCCAGAAAAAGAAAGTCTTCAAAAGTCTTTGGTAGGCCTTCTACTTAGTTGAGTATGAGGAGAGGAAGGAATGACAGCCTAGATAAGTCTACTGCGAGCAGCAGCAAAATTTTAAAGGAAATAGTTTGAAGGGTAGAATGACATGAAGCAAGGAAAGGAATTAATGGAAAATCTGAGAGCAGAGTCCAACTTGTTGGGAGTATCTGAGTAGGGGGAGGACACTCTTAATATTCTTTCCAGCTTTCTACTTCCTCTCAATCTTTAGATTTCTTCCAATGCTTTCTCAGTCTTTTCCATAGTAAACACTTATATATCCATATCATTAAATTGGCAAAATAATAATGATGTGAATATGCTTTAGGGTCAGGTGAGCAGAGCGTTGTAGCCAGTTTGAGAGTTTATGATAAATTAAACACTTGTATATTCATCAATTGATATGCTTGAATGACTTTTAGACTTTTGGTTTTTCTACTTGCAAGATAGAAGATTCATATTAAAAGTTGGGGTTCATTAGAGTGCATTAGTTCATTCATTGTGCATCTATCACCCGTACTTGGATCTTTCCTAATACTTTCTTCCTGAGGTCTGAATATTCCAGGATTCAAACTTCTTCTCTTCATCATCATTTAGATATAAAAATTTATTGGTGGATTAAGAGTCATTGCATGTTTAACAGCTGAATTTCTCTTTTAATTTCTTTCTTTTTTTTATTGTTGATTTCATTGTTAATGGTGTTGTTTCTCATGTGTTCTTGCATCCTTTACCAAATTTACTGGAAATTTTCTGTTCTCTCAAATGCTTGTACTCCCTTTCTCCTTAAAACATAAAAGTGAAAACGTGGTATTCCGTTTCTCTCTCTGTAATCAATTATTTCCATAGATTCTTATATTGTTTTATTAGCAACTATGTGCAGTTGTGTTGTCACGGAATAGAATATCAATTTTAATAACCGTACTTGAACAAGATATGTTCTATAGGTTGTACAACTATGTCCTTAAGTTTTAAGAATACACTTTTAGCTGTATAGATGGTCAAACTATTTTTTGGGCTCAAATTTGGTGAAATTAAAGTAGATATGATTTATTGTGGCAGGACTCATTGACCTTCTTAACCCCTAGCATGTGTAACCCCCTTCTGCTCTTTATCCAGTGGTTATTGATATGAAGAAGGGATCATTTTATAAAATGATTTCTGTGAAACAAAAAGTTAATTCCGGTTATGGCTTTCTCTGCAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGTAATTTTATGCTCTCCCTTTCTTTTCTTTGTTTTTTTTCCTCTAATCCTTTTTTAAGTTCTAAATCTACTTTGTTTCTTGTACCTTTGGTTTGTGTTCATTTTGGTCTTTTAAAATGTTTATATTTTCATTTTGGTTCTTGTACTTTCAACTTTCTTTCATTCAGTCTTGTACTGTCAAGATGTTCGTCGTGGGCTTCATTCTTTTAAATTCGGACAATTTTGGTGTCTTTATTTCATTTGAAATTTTGACATGACAGTTCGTCACTATATTTTTAAAATTGAAGCCATAACTTATTGTGTATAAAACCCAAGTTAAATTTTGTGTAAATATAGGGATCAAGTACGATGAACTAGAACTGACAAATAAAATTTCTCTAAATTTAATTACATGCAGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGTTAGCAGGGCCAAGATTACCCTTTTCCTTTTGGTATCTATGTTCATGTATGAGAAATATGTTCATTTACCTTCTAGCAAACGTTTTCCAAAGAAGATTTATTGCCTTCTACAAGTGATTGTCAAACTGATTACTAATGTAGTTGTAACAATGCTTGCCTATTTGCCATGTCAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

mRNA sequence

ATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCGGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAGTTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAGACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Coding sequence (CDS)

ATGAGAGATTACCATAGCAACGGGAACTTGATGGATGGAAATATCTCTATGAGTACACTCCAGCAATCATCTATGGATCACACTTCAACTAGGCAAAATTTTGTACCGGGCGATCAGTCATTGACTCGTGCATTTGAAAAGTTAAACTTTGGTGATGAGTCGAAGGTGCGTGCTTGGAAGTCTCGTGCCATTCTGTTGGAAAACCATTACTCGGACAACTTGAGCAAACAGTTACAGAATATCGATCCGTCGGTGTTTGCTGCTTGGAGTTCTTCAAATCACTTGACTAATGGTGTTCATGATTCCCATTCGACAAGACTTGGCCACCAAAACTCTCCTTCCAGATATATACCTGAACAGTACAAGAAGTGGCAAACTGGTCAACTTCAGCCATTTGAGTCTTTGTCCCCTAATGCACATTTAACCCATGAGGTGGCTAATGTGTCTGGTCCGAATTCACAGTTCCCAGTTGCATCTCAAAGGCAGCAAGTTCTCCACAATGGGCGACGTTGCATACATCCACAACAGATGAATCATCGTCAAGTTGGTTGGAATTATGCTGAGGAAGACCAGTTGTACAGGATGCATGAGCAGCATCCATACCTGCAGCATCTTCATAACCAGCAATTGGAACGTCTGCTTCCAATTCAACAACATGAAAACATTGCAGGTAGGATTTCAAGTCAGAATCGTAAGCCTCAATATTACGAGGTTCCAATTGCTCACCATCTTGAACAGTCTAATCATGAACCAACATGGAAGCCGAGTGCATTTTGTAGGGGTTCAGACCAGTTAAATTCTGTATTTTCAACACACTATATGGACACAGTTCAAGGTATGGAAAAAGTTTCCTTTCCTAGAAAGATCCTTGGTAGAAGTCCTGGAATGAACACTGTTGATGCTATGAGGTTTATGTCTATGGATGCTGATAAATCATCCAATCATGTCAACCAATGTAGATTTCTCCGCCCAAATAGCTTTTTTCGGCCCAACAATTTGTCTACAGCTAATGAATGCATGTGTCGTGATCACTCTTCTGCTATGTACTCAGAATCTCCAAGTCTTAAGTTAGTGCCGGAGAGATTTAATTCTGTTGATGAAGTTCGGGGTAGAATATTTCTCATGGCTAAAGACCAACATGGTTGTCGTTTCTTGCAACGGAAATTTATGGAGGGTACTGATGAAGATATTGAGAAAATTTTCAAAGAAATTATTGATCGTGTTGTTGAACTCATGATGGATGCTTTCGGAAATTATTTAGTACAGAAGCTGCTTGAAGTTTGCAATGACAATCAGCGGATGCAAATCCTACGTAGAATTACACAGAACCATGGTGAACTTGTTATGATTTCATGTGACATGCATGGGACTCGTGCTATTCAAAAGGTTATTGAAACCCTTAAAACCCAAGAGCAAGTTCACATGATTGTCTCAGCTTTGAAGTCTGGTATAGTGACTCTGATGAAAAATATAAATGGCAACCATGTGGCACAACATTGCCTTGATTATTTGATGCCTAGTTGCCGTGAGTTACTGTTTGATGCTGCAAGAAATAGTTGTGTTGATCTTGCTGTTGATCGCCACGGTTGTTGTGTACTTCAAAAATGCCTCAGTTGTTCCGACAGCACCGACCGTGATAATTTAATCAATGAGATCACCCAAAATGCTCTGATTATTTCCCAAGATCAATATGGGAACTATGTTGTACAGTTCATCCTCAAGCTTAATCTTCGATGGGCTACAGAAGCTATACTCAAACAGCTAGAGGGTAATTATGGGGACTTGTCCATGCAGAAGTATAGTAGCAACGTTGTTGAAAAATGCCTGCAATTTGCGGGAGGACAAATTACTAAAATTGTGCTTGAATTGATTAACGATCCCCGATTTGATAAAATCATGCAGGACCCATATGGCAATTATGCGATTCAAACTGCTTTGAATAATACTGAGGGTACTCTTCATACTAAATTGGTGGAAGCCATAAGGCCACACGTTCCGGTACTAAGGATGAGTCCATATGGGAAAAAAGTCCTTGCAATAGTTGGAAAATCTAATTAA

Homology

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BLAST of CSPI01G29210 vs. Swiss-Prot
Match: PUM12_ARATH (Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2)

HSP 1 Score: 406.0 bits (1042), Expect = 8.8e-112
Identity = 232/505 (45.94%), Postives = 315/505 (62.38%), Query Frame = 1


Query: 226 RQVGWNYAEEDQLYRMHEQH--PYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYE 285
           +QVG+       +     QH  P+ Q L + Q        + EN   R+  Q    QY  
Sbjct: 113 QQVGYLPNLSSGISPAQRQHYLPHSQPLSHYQSPMTWRDIEEENFQ-RLKLQEE--QYLS 172

Query: 286 V-PIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-G 345
           + P   HL+  +  P      + R ++Q N     +  D  + + K+ +P KIL RS   
Sbjct: 173 INPHFLHLQSMDTVPRQDHFDY-RRAEQSNRNLFWNGEDGNESVRKMCYPEKILMRSQMD 232

Query: 346 MNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSL 405
           +NT   +++ + D  ++       R    N       +S  N                 L
Sbjct: 233 LNTAKVIKYGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------L 292

Query: 406 KLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDA 465
            L P+++NS+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD 
Sbjct: 293 SLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDP 352

Query: 466 FGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHM 525
           FGNYLVQKLLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +
Sbjct: 353 FGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI 412

Query: 526 IVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQK 585
           I+SALK GIV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQK
Sbjct: 413 IISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQK 472

Query: 586 CLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDL 645
           CL  S+   + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +L
Sbjct: 473 CLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTEL 532

Query: 646 SMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLH 705
           SMQK SSNVVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H
Sbjct: 533 SMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVH 590

Query: 706 TKLVEAIRPHVPVLRMSPYGKKVLA 726
             LV+AI+ ++  LR +PYGKKVL+
Sbjct: 593 ALLVDAIKLNISSLRTNPYGKKVLS 590

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BLAST of CSPI01G29210 vs. Swiss-Prot
Match: PUM8_ARATH (Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 SV=2)

HSP 1 Score: 328.6 bits (841), Expect = 1.8e-88
Identity = 158/320 (49.38%), Postives = 225/320 (70.31%), Query Frame = 1


Query: 406 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 465
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 466 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 525
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 526 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 585
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 586 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 645
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 646 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 705
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 706 AIRPHVPVLRMSPYGKKVLA 726
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

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BLAST of CSPI01G29210 vs. Swiss-Prot
Match: PUM7_ARATH (Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 3.4e-87
Identity = 154/313 (49.20%), Postives = 223/313 (71.25%), Query Frame = 1


Query: 413 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 472
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 473 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 532
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 533 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 592
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 593 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 652
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 653 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 712
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 713 VLRMSPYGKKVLA 726
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

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BLAST of CSPI01G29210 vs. Swiss-Prot
Match: PUM11_ARATH (Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.1e-76
Identity = 141/310 (45.48%), Postives = 214/310 (69.03%), Query Frame = 1


Query: 416 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 475
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 476 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 535
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 536 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 595
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 596 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 655
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 656 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 715
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 716 MSPYGKKVLA 726
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

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BLAST of CSPI01G29210 vs. Swiss-Prot
Match: PUM9_ARATH (Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 8.1e-73
Identity = 146/327 (44.65%), Postives = 214/327 (65.44%), Query Frame = 1


Query: 402 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 461
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 462 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 521
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 522 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 581
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 582 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 641
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 642 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 701
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 702 LHTKLVEAIRPHVPVLRMSPYGKKVLA 726
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]

BLAST of CSPI01G29210 vs. TrEMBL
Match: A0A0A0LX44_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1)

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 629/704 (89.35%), Postives = 637/704 (90.48%), Query Frame = 1


Query: 28  NADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL 87
           +ADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL
Sbjct: 9   HADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL 68

Query: 88  TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD 147
           TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD
Sbjct: 69  TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD 128

Query: 148 SHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPVASQR 207
           SHSTRLGHQNSPSRYIPEQYKKWQ                       +G    F   S  
Sbjct: 129 SHSTRLGHQNSPSRYIPEQYKKWQ-----------------------TGQLQPFESLSPN 188

Query: 208 QQVLHNGRRCIHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHEN 267
             + H       P         +  A +    R    H   + +H QQLERLLPIQQHEN
Sbjct: 189 AHLTHEVANVSGPNSQ------FPIASQ----RQQVLHNGRRCIHPQQLERLLPIQQHEN 248

Query: 268 IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGME 327
           IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGS+QLNSVFSTHYMDTVQGME
Sbjct: 249 IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGME 308

Query: 328 KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC 387
           KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC
Sbjct: 309 KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC 368

Query: 388 RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF 447
           RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF
Sbjct: 369 RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF 428

Query: 448 KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ 507
           KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ
Sbjct: 429 KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ 488

Query: 508 KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV 567
           KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV
Sbjct: 489 KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV 548

Query: 568 DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT 627
           DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT
Sbjct: 549 DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT 608

Query: 628 EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA 687
           EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA
Sbjct: 609 EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA 668

Query: 688 IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 732
           IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 669 IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 679

[Close]

BLAST of CSPI01G29210 vs. TrEMBL
Match: M5W697_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 622.1 bits (1603), Expect = 8.7e-175
Identity = 368/779 (47.24%), Postives = 483/779 (62.00%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGNADPE-----------GLSSISVSSYEGSSMRD 60
           MEE   E EF++  K +G +IPN  S N   E            LS I V+SY+      
Sbjct: 1   MEEGRTELEFDEFEKLLG-EIPNATSVNPHSEESGIKSVSLNGSLSPICVNSYKRPLSDK 60

Query: 61  YHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDES 120
            H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E 
Sbjct: 61  LHTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEE 120

Query: 121 KVRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNS 180
             ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S
Sbjct: 121 TCKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESS 180

Query: 181 P-SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPVASQRQQVL 240
             S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ  
Sbjct: 181 NMSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFF 240

Query: 241 HNGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENI 300
            + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NI
Sbjct: 241 LDAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNI 300

Query: 301 AGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEK 360
           A R++  N +  ++EVPI+H LEQSN E         RG  Q N   S   ++ +Q  +K
Sbjct: 301 ASRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDK 360

Query: 361 V---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANEC 420
           V   SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N  
Sbjct: 361 VGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTG 420

Query: 421 MCRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHG 480
             +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHG
Sbjct: 421 CFQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHG 480

Query: 481 CRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRIT 540
           CRFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT
Sbjct: 481 CRFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSIT 540

Query: 541 QNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCL 600
           +  GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL
Sbjct: 541 KKPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCL 600

Query: 601 DYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQ 660
            YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQ
Sbjct: 601 QYLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQ 660

Query: 661 DQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIV 720
           D +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV
Sbjct: 661 DPFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIV 720

Query: 721 LELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
            ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 QELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIKPHVPVLRTSPYGKKILS 777

[Close]

BLAST of CSPI01G29210 vs. TrEMBL
Match: U5GNJ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1)

HSP 1 Score: 619.8 bits (1597), Expect = 4.3e-174
Identity = 362/758 (47.76%), Postives = 479/758 (63.19%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGN-----ADPEGL------SSISVSSYEGSSMRD 60
           ME+   E EF++  K +G +IPN  SGN     A P+        + +SV+S++G  +  
Sbjct: 1   MEDQRTELEFDEFEKLLG-EIPNATSGNQHSADAGPKSAPLNGSWAPVSVNSFKGPFIEK 60

Query: 61  YHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRA 120
             SNG+L D  I  +  QQS   +  + +  +P DQSLT AF +L+F   S +  +KS  
Sbjct: 61  LESNGSLDDRQILANKTQQSPTTNAQSEEANLPDDQSLTLAFAELSFNSGSPLANYKS-- 120

Query: 121 ILLENHYSDNLSKQLQNIDPSVFAA--WSSSNHLTNGVHDSHSTRLGHQNSPS-RYIPEQ 180
           +   + Y++ ++  L N D S  AA  + S N+L +G    ++ ++ H+ S   ++   +
Sbjct: 121 LPNPSVYTNTMNSSLSNTDSSTMAAPPYQSPNNLPSGFDKFNAVKVCHEQSNFIKFDARE 180

Query: 181 YKKWQTGQLQP-----FESLSPNAHLTHE---VANVSGPNSQFPVASQRQQVLHNGRRC- 240
            KK  T   QP     F +  P  H       ++N++ P   FP+ S  QQ   + +   
Sbjct: 181 QKKVPTDFCQPHPIKKFSTALPPTHGMQGFQLLSNMAVPGMDFPLMSDHQQYFTDVQPSL 240

Query: 241 --IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQ 300
             +H QQ+N   + W   EE+Q YRMH+Q  YLQ L NQ+LE   P   + N+  ++ S+
Sbjct: 241 PYVHSQQLNRSHINWRNIEEEQCYRMHQQCLYLQQLRNQRLEAQNPTSANGNVETKLMSR 300

Query: 301 NRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKVSFPRKI 360
           N +  Y EVP +H L+QSN E  W   A  RG +Q     S + +  +  + K SFP KI
Sbjct: 301 NVRQPYLEVPFSHQLQQSNQETFWSNYAVTRGLNQ-----SQNGIRVLDKVGKQSFPEKI 360

Query: 361 LGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAM- 420
           L RS G+NT+ A++F S+  ++S  H+N    L  N+    +  +    C   D  S+  
Sbjct: 361 LTRSQGLNTLKALKFGSVGGNESLAHLNHNGKLLSNAHLFHSLSTPTAGCFQLDPLSSWN 420

Query: 421 ------YSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFK 480
                   +S +L+  P ++NSVDEV GRI+LMAKDQHGCRFLQR F EGT +D+EKIF 
Sbjct: 421 LSPDFTVLKSTNLRAQPPKYNSVDEVTGRIYLMAKDQHGCRFLQRTFSEGTPQDVEKIFL 480

Query: 481 EIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQK 540
           EIID +VELM D FGNYLVQKLLEVCN++QRMQILR IT+  GELV ISCDMHGTRA+QK
Sbjct: 481 EIIDHIVELMTDPFGNYLVQKLLEVCNEDQRMQILRTITRKAGELVRISCDMHGTRAVQK 540

Query: 541 VIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVD 600
           VIETLKT EQ  M+VSALK  IVTL+KN+NGNHVAQ CL YLMP   E LF+A   +CV+
Sbjct: 541 VIETLKTPEQFSMVVSALKPCIVTLIKNMNGNHVAQRCLQYLMPEYSEFLFEATTANCVE 600

Query: 601 LAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATE 660
           LA DRHGCCVLQKCLS S    R  L++EIT NALI+SQD +GNYVVQF+ +L L WA  
Sbjct: 601 LATDRHGCCVLQKCLSQSKGEQRRCLVSEITSNALILSQDPFGNYVVQFVFELRLPWAAT 660

Query: 661 AILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELINDPRFDKIMQDPYGNYA 720
            IL QLEGNYGDLS+QKYSSNVVEKCL++AG  + T+I+ ELIN+ R D++MQDP+GNY 
Sbjct: 661 DILDQLEGNYGDLSVQKYSSNVVEKCLKYAGEVRRTRIIRELINNSRLDQVMQDPFGNYV 720

Query: 721 IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
           IQ AL  ++G LH  LVEAIRPHVP L+ SPYGKKVL+
Sbjct: 721 IQAALQQSKGALHAALVEAIRPHVPTLQTSPYGKKVLS 750

[Close]

BLAST of CSPI01G29210 vs. TrEMBL
Match: B9SBN7_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 7.4e-174
Identity = 359/754 (47.61%), Postives = 482/754 (63.93%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGNADPE-------GLSSISVSSYEGSSMRDYHSN 60
           ME    E +F++  K +G +IPN  SGN   E       GLS I ++S+EG       SN
Sbjct: 1   MEVGRTELDFDEFEKLLG-EIPNATSGNPHSEEAATLNGGLSPICMNSFEGRLTEKLQSN 60

Query: 61  GNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWKSRAILLE 120
           G+  +  + +S  Q+S +    + +  +P DQSLT AF  L+F   S    +KS      
Sbjct: 61  GSPNERKLLISKNQESPIKRVQSEEANLPDDQSLTSAFTDLSFNTGSGSTNFKS------ 120

Query: 121 NHYSDNLSKQLQNIDPSVFAAWSSSNHLTN--GVHDSHSTRLGHQNSPS-RYIPEQYKKW 180
                  S +  +I  S+  A S    +    G  + ++T++GH++S   ++   + K+ 
Sbjct: 121 -------SPKAPSISLSMTGAPSFRLPIAVPCGFDEFNATKVGHESSNLLKFNAHELKQI 180

Query: 181 QTG--QLQPFESLSPNAHLTHEV------ANVSGPNSQFPVASQRQQVLHNGRR---CIH 240
             G  Q QP E+LS    L H V      +NV+ P   FP+ S ++Q   + +    CIH
Sbjct: 181 PAGYRQPQPIENLSSALPLAHGVQGFQFLSNVAVPGIDFPLMSDQRQYFADMQSVLPCIH 240

Query: 241 PQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRISSQNRKP 300
            QQ N   + W   EE+Q YRMH+Q+ YLQ LHNQ+LE   P+Q + N+A ++ +++ + 
Sbjct: 241 AQQFNQPHISWRNIEEEQFYRMHQQYLYLQQLHNQRLEAQHPMQANGNVATKLMNRHVRQ 300

Query: 301 QYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKVSFPRKILGRS 360
            Y+EVP++H L+Q N E  W   A  RG +Q     S + M+ +  + K SFP KIL RS
Sbjct: 301 PYFEVPVSHQLQQPNQEQVWNDYAVTRGLNQ-----SQNGMNILDEVGKQSFPEKILTRS 360

Query: 361 PGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSA------ 420
            G++T+ A+++ S   ++S  +++Q   +  N   R      + EC   DH S+      
Sbjct: 361 QGLSTLKAVKYSSAGGNESLANLSQNGKVLLNGHLRHTLTPPSAECFQLDHLSSWDLSPD 420

Query: 421 -MYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIID 480
            +  +S +L+  P+++NSVDEV GR++LMAKDQHGCRFLQRKF EGT +DIEKIF E+ID
Sbjct: 421 IIDLKSTNLRPQPQKYNSVDEVTGRVYLMAKDQHGCRFLQRKFSEGTPQDIEKIFLEVID 480

Query: 481 RVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIET 540
            + ELM D FGNYLVQKLLEVCN++QRMQIL  IT+  GELV ISCDMHGTRA+QKVIET
Sbjct: 481 HIAELMTDPFGNYLVQKLLEVCNEDQRMQILCAITRKAGELVRISCDMHGTRAVQKVIET 540

Query: 541 LKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVD 600
           LKT +Q  M+VS+LK GIVTL+KN+NGNHVAQ CL YL P   E LF+AA  +CV+LA D
Sbjct: 541 LKTPQQFSMVVSSLKPGIVTLIKNMNGNHVAQRCLQYLTPEHSEFLFEAATTNCVELATD 600

Query: 601 RHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILK 660
           RHGCCVLQKCLS S+   R  LI+EIT NALI+SQD +GNYVVQF+ +L L WAT  IL 
Sbjct: 601 RHGCCVLQKCLSHSEGEQRRCLISEITSNALILSQDPFGNYVVQFVFELRLPWATANILD 660

Query: 661 QLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTA 720
           QLEGNYGDLSMQKYSSNV+EKCL++A  +    I+ +LI++   D++MQDPYGNY IQ A
Sbjct: 661 QLEGNYGDLSMQKYSSNVIEKCLKYASEEHRAHIIRQLISNTHLDQVMQDPYGNYVIQAA 720

Query: 721 LNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
           L+ ++G LH  LVEAIRPHVPVLR SPYGKKVL+
Sbjct: 721 LHQSKGALHAALVEAIRPHVPVLRTSPYGKKVLS 735

[Close]

BLAST of CSPI01G29210 vs. TrEMBL
Match: M5WJ63_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 1.6e-173
Identity = 368/780 (47.18%), Postives = 483/780 (61.92%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGNADPE-----------GLSSISVSSYEGSSMRD 60
           MEE   E EF++  K +G +IPN  S N   E            LS I V+SY+      
Sbjct: 1   MEEGRTELEFDEFEKLLG-EIPNATSVNPHSEESGIKSVSLNGSLSPICVNSYKRPLSDK 60

Query: 61  YHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDES 120
            H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E 
Sbjct: 61  LHTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEE 120

Query: 121 KVRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNS 180
             ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S
Sbjct: 121 TCKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESS 180

Query: 181 P-SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPVASQRQQVL 240
             S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ  
Sbjct: 181 NMSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFF 240

Query: 241 HNGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENI 300
            + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NI
Sbjct: 241 LDAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNI 300

Query: 301 AGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEK 360
           A R++  N +  ++EVPI+H LEQSN E         RG  Q N   S   ++ +Q  +K
Sbjct: 301 ASRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDK 360

Query: 361 V---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANEC 420
           V   SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N  
Sbjct: 361 VGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTG 420

Query: 421 MCRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHG 480
             +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHG
Sbjct: 421 CFQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHG 480

Query: 481 CRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRIT 540
           CRFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT
Sbjct: 481 CRFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSIT 540

Query: 541 QNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCL 600
           +  GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL
Sbjct: 541 KKPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCL 600

Query: 601 DYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQ 660
            YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQ
Sbjct: 601 QYLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQ 660

Query: 661 DQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIV 720
           D +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV
Sbjct: 661 DPFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIV 720

Query: 721 LELINDPRFDKIMQDPYGNYAIQTALNNT-EGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
            ELI +PR D+IMQDPYGNY IQ AL+ + +GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 QELIENPRLDQIMQDPYGNYVIQAALSQSKQGTFHSKLMDAIKPHVPVLRTSPYGKKILS 778

[Close]

BLAST of CSPI01G29210 vs. TAIR10
Match: AT5G56510.1 (AT5G56510.1 pumilio 12)

HSP 1 Score: 406.0 bits (1042), Expect = 5.0e-113
Identity = 232/505 (45.94%), Postives = 315/505 (62.38%), Query Frame = 1


Query: 226 RQVGWNYAEEDQLYRMHEQH--PYLQHLHNQQLERLLPIQQHENIAGRISSQNRKPQYYE 285
           +QVG+       +     QH  P+ Q L + Q        + EN   R+  Q    QY  
Sbjct: 113 QQVGYLPNLSSGISPAQRQHYLPHSQPLSHYQSPMTWRDIEEENFQ-RLKLQEE--QYLS 172

Query: 286 V-PIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKVSFPRKILGRSP-G 345
           + P   HL+  +  P      + R ++Q N     +  D  + + K+ +P KIL RS   
Sbjct: 173 INPHFLHLQSMDTVPRQDHFDY-RRAEQSNRNLFWNGEDGNESVRKMCYPEKILMRSQMD 232

Query: 346 MNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRDHSSAMYSESPSL 405
           +NT   +++ + D  ++       R    N       +S  N                 L
Sbjct: 233 LNTAKVIKYGAGDESQNG------RLWLQNQLNEDLTMSLNN-----------------L 292

Query: 406 KLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDA 465
            L P+++NS+ E RG+I+ +AKDQHGCRFLQR F E    DIE IF EIID + ELMMD 
Sbjct: 293 SLQPQKYNSIAEARGKIYYLAKDQHGCRFLQRIFSEKDGNDIEMIFNEIIDYISELMMDP 352

Query: 466 FGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHM 525
           FGNYLVQKLLEVCN++QRMQI+  IT+  G L+ ISCDMHGTRA+QK++ET K +E++ +
Sbjct: 353 FGNYLVQKLLEVCNEDQRMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISI 412

Query: 526 IVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQK 585
           I+SALK GIV L+KN+NGNHV Q CL YL+P C + LF+AA   CV+LA DRHGCCVLQK
Sbjct: 413 IISALKHGIVHLIKNVNGNHVVQRCLQYLLPYCGKFLFEAAITHCVELATDRHGCCVLQK 472

Query: 586 CLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDL 645
           CL  S+   + +L++EI  NAL++SQD +GNYV+Q++ +L L+WAT  IL+QLEGNY +L
Sbjct: 473 CLGYSEGEQKQHLVSEIASNALLLSQDPFGNYVLQYVFELQLQWATFEILEQLEGNYTEL 532

Query: 646 SMQKYSSNVVEKCLQFAGGQ-ITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLH 705
           SMQK SSNVVEKCL+ A  +   +I+ ELIN  R D++M DPYGNY IQ AL  ++G +H
Sbjct: 533 SMQKCSSNVVEKCLKLADDKHRARIIRELINYGRLDQVMLDPYGNYVIQAALKQSKGNVH 590

Query: 706 TKLVEAIRPHVPVLRMSPYGKKVLA 726
             LV+AI+ ++  LR +PYGKKVL+
Sbjct: 593 ALLVDAIKLNISSLRTNPYGKKVLS 590

[Close]

BLAST of CSPI01G29210 vs. TAIR10
Match: AT1G22240.1 (AT1G22240.1 pumilio 8)

HSP 1 Score: 328.6 bits (841), Expect = 1.0e-89
Identity = 158/320 (49.38%), Postives = 225/320 (70.31%), Query Frame = 1


Query: 406 ERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNY 465
           E    V E +G ++ MAKDQHGCRFLQ  F +G+  D   IF E+I  VVELMMD FGNY
Sbjct: 191 ESLPKVSEFQGYVYFMAKDQHGCRFLQWIFEDGSALDALVIFSEVIPHVVELMMDPFGNY 250

Query: 466 LVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSA 525
           L+QKLL+VCN+ QR QI+  +T   G+L+ IS + +GTR +Q+++E++KT++Q+ ++ SA
Sbjct: 251 LMQKLLDVCNEEQRTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSA 310

Query: 526 LKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSC 585
           L+ G + L++++NGNHV Q CL  L     E +F+ A   C+D+A  RHGCCVLQKC++ 
Sbjct: 311 LRPGFLNLIRDLNGNHVIQRCLQCLSTEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAY 370

Query: 586 SDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQK 645
           S    R+ L+ EI++N+L ++QD YGNY VQF+L+L    A  A+L QL+G+Y +LSMQK
Sbjct: 371 SSGLQREKLVTEISRNSLFLAQDPYGNYAVQFVLELRDFSAIAAMLAQLKGHYVELSMQK 430

Query: 646 YSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVE 705
           +SS++VE+CL        +IV ELI+ P FD ++QDPY N+ IQ AL  T+G+LH  LVE
Sbjct: 431 FSSHMVERCLTHCPESRPQIVRELISVPHFDILIQDPYANFVIQAALAVTKGSLHATLVE 490

Query: 706 AIRPHVPVLRMSPYGKKVLA 726
            IRPH  +LR +PY K++ +
Sbjct: 491 VIRPH-SILRNNPYCKRIFS 509

[Close]

BLAST of CSPI01G29210 vs. TAIR10
Match: AT1G78160.1 (AT1G78160.1 pumilio 7)

HSP 1 Score: 324.3 bits (830), Expect = 1.9e-88
Identity = 154/313 (49.20%), Postives = 223/313 (71.25%), Query Frame = 1


Query: 413 EVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLE 472
           +++G ++LMAKDQHGCRFLQR F EGT  D   IF E+I  VVELMMD FGNYL+QKLL+
Sbjct: 333 DIQGYVYLMAKDQHGCRFLQRIFDEGTSVDAMIIFNEVIAHVVELMMDPFGNYLMQKLLD 392

Query: 473 VCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVT 532
           VC + QR QI+   T+  G+L+ IS + +GTR +Q+++ET+++ +Q+ ++  AL+ G + 
Sbjct: 393 VCTEEQRTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGFLD 452

Query: 533 LMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRD 592
           L+K++NGNHV Q CL  L     + +FDAA   C ++A  RHGCCVLQKC++ S    R+
Sbjct: 453 LIKDLNGNHVIQRCLQCLSTEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQRE 512

Query: 593 NLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVE 652
            LI EI++N+L+++QD +GNY VQF+++L +  A   +L QL+G+Y  LSMQK+SS++VE
Sbjct: 513 KLIAEISRNSLLLAQDPFGNYAVQFVIELRIPSAVAMMLAQLKGHYVQLSMQKFSSHMVE 572

Query: 653 KCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVP 712
           +CL        +IV EL++ P FD+++QDPY N+ IQ AL  T+G LH  LVE IRPH  
Sbjct: 573 RCLMHCPESRPQIVRELVSVPHFDQLLQDPYANFVIQAALAATKGPLHASLVEVIRPH-S 632

Query: 713 VLRMSPYGKKVLA 726
           +LR +PY K++ +
Sbjct: 633 ILRNNPYCKRIFS 644

[Close]

BLAST of CSPI01G29210 vs. TAIR10
Match: AT4G08840.1 (AT4G08840.1 pumilio 11)

HSP 1 Score: 288.5 bits (737), Expect = 1.2e-77
Identity = 141/310 (45.48%), Postives = 214/310 (69.03%), Query Frame = 1


Query: 416 GRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCN 475
           G ++LMAKDQ GCR LQ+   EG   D+  IFKE+I+ V+EL  D FGNYL+QKL+EVCN
Sbjct: 244 GSVYLMAKDQLGCRLLQKFVDEGNFVDVMIIFKEVINNVIELGTDPFGNYLIQKLIEVCN 303

Query: 476 DNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMK 535
           + QR QIL R+T   G LV IS + +GTR +QK+IET+ T+EQ+ ++ SAL  G ++L +
Sbjct: 304 EEQRTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLVKSALVPGFLSLFR 363

Query: 536 NINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLI 595
            +NGNHV  +CL +  P+  + + +AA   C+++A  RHGCCVLQ+C+S S     + L+
Sbjct: 364 ELNGNHVILNCLKFFSPNDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQHEKLV 423

Query: 596 NEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCL 655
           +EI++N+L+++QD +GNY+VQ+I++  +      +L +L GNY  L+ QK+ S+VVEKCL
Sbjct: 424 DEISRNSLLLAQDPFGNYLVQYIIEKKVGGVN--VLFELRGNYVKLATQKFGSHVVEKCL 483

Query: 656 QFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLR 715
           ++     ++IV EL++   F  ++QDPY NY IQ AL+ T+G +   LVE +R +   L+
Sbjct: 484 RYYPESRSQIVNELVSVLNFGYLLQDPYANYVIQCALSKTKGFVRASLVEKVRRY-ENLK 543

Query: 716 MSPYGKKVLA 726
           M+PY K++ +
Sbjct: 544 MTPYCKRIFS 550

[Close]

BLAST of CSPI01G29210 vs. TAIR10
Match: AT1G35730.1 (AT1G35730.1 pumilio 9)

HSP 1 Score: 276.6 bits (706), Expect = 4.5e-74
Identity = 146/327 (44.65%), Postives = 214/327 (65.44%), Query Frame = 1


Query: 402 KLVPERFN---SVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIFKEIIDRVVELM 461
           K+ P+  N   S+ E+ G + LMAKDQ GCR LQ+   EGT  + + I   IID VVEL 
Sbjct: 235 KMSPKSNNDLVSMVEIYGSVNLMAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHVVELS 294

Query: 462 MDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQKVIETLKTQEQ 521
           MD FGNY+VQKL +V ++ QR  I+  +T N  EL+ I  + +GTR +QK+IET+KT++Q
Sbjct: 295 MDPFGNYIVQKLFDVSDEEQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQ 354

Query: 522 VHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCVDLAVDRHGCCV 581
           + ++ S LK G + L+K++NGNHV Q CL  L P+  E + +AA   C ++A+ RHGCCV
Sbjct: 355 IALVKSGLKPGFLALVKDLNGNHVIQSCLQTLGPNDNEFVLEAATKYCAEIAIHRHGCCV 414

Query: 582 LQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWATEAILKQLEGNY 641
           LQ C+S S    R+ L+ EI++N+L +SQD +GNYVVQ+++   +  +   +L Q   +Y
Sbjct: 415 LQCCISNSVGLQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQV--SAVKLLVQFRMHY 474

Query: 642 GDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYAIQTALNNTEGT 701
            +L+ QK+SS+V+EKCL+       +IV EL+  P F+ ++QDPY NY IQTAL+ T+G 
Sbjct: 475 AELATQKFSSHVIEKCLRKYPESRAEIVRELLCVPNFEYLLQDPYANYVIQTALSVTKGP 534

Query: 702 LHTKLVEAIRPHVPVLRMSPYGKKVLA 726
           +  KLV  +  +   L  SPY KK+ +
Sbjct: 535 VRAKLVAKVYRY-GKLHSSPYCKKIFS 558

[Close]

BLAST of CSPI01G29210 vs. NCBI nr
Match: gi|659100267|ref|XP_008451010.1| (PREDICTED: pumilio homolog 12-like [Cucumis melo])

HSP 1 Score: 1315.8 bits (3404), Expect = 0.0e+00
Identity = 660/706 (93.48%), Postives = 678/706 (96.03%), Query Frame = 1


Query: 28  NADPEG-LSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQS 87
           +ADPEG L SISVSSYEGSSMRD+HSNG+LMDGNISMSTLQQSSMDHTSTRQN V GDQS
Sbjct: 9   HADPEGCLLSISVSSYEGSSMRDFHSNGHLMDGNISMSTLQQSSMDHTSTRQNSVSGDQS 68

Query: 88  LTRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVH 147
           LTRAFEKLNFGDESK RAW+SRA L E+HYSDNLSKQLQNIDPSVFAAWS S+HLTNGVH
Sbjct: 69  LTRAFEKLNFGDESKGRAWRSRAFLFEDHYSDNLSKQLQNIDPSVFAAWSPSSHLTNGVH 128

Query: 148 DSHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPVASQ 207
           D HSTRLGHQN PSRYIPEQYKKWQ GQLQPFESLSPNAHLT EV NVS PNSQFP+ASQ
Sbjct: 129 DPHSTRLGHQNPPSRYIPEQYKKWQLGQLQPFESLSPNAHLTQEVVNVSAPNSQFPIASQ 188

Query: 208 RQQVLHNGRRCIHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHE 267
           RQQVLHNGRR IHPQQMNHRQ GWNYAEEDQL+RMHEQHPYLQHLHNQQLERLLPIQQHE
Sbjct: 189 RQQVLHNGRR-IHPQQMNHRQAGWNYAEEDQLFRMHEQHPYLQHLHNQQLERLLPIQQHE 248

Query: 268 NIAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGM 327
           NIA RISSQNRKPQY+EVPIAHHLEQSN+EP+WK SAF RGS+QLNSVFSTHYMDT+QGM
Sbjct: 249 NIANRISSQNRKPQYFEVPIAHHLEQSNYEPSWKASAFRRGSNQLNSVFSTHYMDTIQGM 308

Query: 328 EKVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECM 387
           EKVSFPRKILGRSPG+NTVDAMRFMS+D DKSSNHVNQ RFLRPNS FRPN+LSTANECM
Sbjct: 309 EKVSFPRKILGRSPGLNTVDAMRFMSIDGDKSSNHVNQSRFLRPNSCFRPNHLSTANECM 368

Query: 388 CRDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKI 447
           CRDHS AMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKI
Sbjct: 369 CRDHSPAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKI 428

Query: 448 FKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAI 507
           F EIID VV+LM+DAFGNYLVQKLLEVCNDNQRMQIL RITQNHGELVMISCDMHGTRAI
Sbjct: 429 FNEIIDHVVDLMVDAFGNYLVQKLLEVCNDNQRMQILCRITQNHGELVMISCDMHGTRAI 488

Query: 508 QKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSC 567
           QKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSC
Sbjct: 489 QKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSC 548

Query: 568 VDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWA 627
           VDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWA
Sbjct: 549 VDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWA 608

Query: 628 TEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGG-QITKIVLELINDPRFDKIMQDPYGN 687
           TEAILKQLEGNYGDLSMQKYSSNVVEKCLQFA G QITKIVLELINDPRFDKIMQDPYGN
Sbjct: 609 TEAILKQLEGNYGDLSMQKYSSNVVEKCLQFADGVQITKIVLELINDPRFDKIMQDPYGN 668

Query: 688 YAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 732
           YAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 669 YAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 713

[Close]

BLAST of CSPI01G29210 vs. NCBI nr
Match: gi|778663304|ref|XP_004144136.2| (PREDICTED: pumilio homolog 12-like [Cucumis sativus])

HSP 1 Score: 1226.8 bits (3173), Expect = 0.0e+00
Identity = 629/704 (89.35%), Postives = 637/704 (90.48%), Query Frame = 1


Query: 28  NADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL 87
           +ADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL
Sbjct: 9   HADPEGLSSISVSSYEGSSMRDYHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSL 68

Query: 88  TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD 147
           TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD
Sbjct: 69  TRAFEKLNFGDESKVRAWKSRAILLENHYSDNLSKQLQNIDPSVFAAWSSSNHLTNGVHD 128

Query: 148 SHSTRLGHQNSPSRYIPEQYKKWQTGQLQPFESLSPNAHLTHEVANVSGPNSQFPVASQR 207
           SHSTRLGHQNSPSRYIPEQYKKWQ                       +G    F   S  
Sbjct: 129 SHSTRLGHQNSPSRYIPEQYKKWQ-----------------------TGQLQPFESLSPN 188

Query: 208 QQVLHNGRRCIHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHEN 267
             + H       P         +  A +    R    H   + +H QQLERLLPIQQHEN
Sbjct: 189 AHLTHEVANVSGPNSQ------FPIASQ----RQQVLHNGRRCIHPQQLERLLPIQQHEN 248

Query: 268 IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGME 327
           IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGS+QLNSVFSTHYMDTVQGME
Sbjct: 249 IAGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSNQLNSVFSTHYMDTVQGME 308

Query: 328 KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC 387
           KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC
Sbjct: 309 KVSFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMC 368

Query: 388 RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF 447
           RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF
Sbjct: 369 RDHSSAMYSESPSLKLVPERFNSVDEVRGRIFLMAKDQHGCRFLQRKFMEGTDEDIEKIF 428

Query: 448 KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ 507
           KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ
Sbjct: 429 KEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHGELVMISCDMHGTRAIQ 488

Query: 508 KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV 567
           KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV
Sbjct: 489 KVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLMPSCRELLFDAARNSCV 548

Query: 568 DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT 627
           DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT
Sbjct: 549 DLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYGNYVVQFILKLNLRWAT 608

Query: 628 EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA 687
           EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA
Sbjct: 609 EAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQITKIVLELINDPRFDKIMQDPYGNYA 668

Query: 688 IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 732
           IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN
Sbjct: 669 IQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLAIVGKSN 679

[Close]

BLAST of CSPI01G29210 vs. NCBI nr
Match: gi|694422736|ref|XP_009339193.1| (PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri])

HSP 1 Score: 633.6 bits (1633), Expect = 4.2e-178
Identity = 371/775 (47.87%), Postives = 487/775 (62.84%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGNADPE-------GLSSISVSSYEGSSMRDYHSN 60
           MEE   E EF++  K +G +IPN  SGN   E        LS I V+S +G      H+N
Sbjct: 1   MEEGRTELEFDEFEKLLG-EIPNATSGNTHSEESGTKNASLSPICVNSCKGPLSDKLHNN 60

Query: 61  GNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAWK--SRAIL 120
           G L +G  S   +Q+S +         +P DQSLT A   L+F     + A         
Sbjct: 61  GRLDEGKNSAKKIQKSPVKRVQREVTNLPDDQSLTSALAGLSFNGAVNMEAGSHVKNCKS 120

Query: 121 LENHYS------DNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP-SRY 180
           L+N++S      ++L  Q+ ++D  V    ++ + N +  G ++   T  G ++S  S++
Sbjct: 121 LQNYFSMDGQIPNSLKMQVSSMDTPVMVVPSFQAPNKIPCGFYEFDVTNSGQESSNMSKF 180

Query: 181 IPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPVASQRQQVLHNGRR 240
             E+ KK Q    QP E+LSP   L H V      +NV  P  QFP+ S  QQ      +
Sbjct: 181 NSEELKKPQAAYSQPIENLSPGVPLAHAVEGFQFLSNVPAPGLQFPLTSDHQQQFFLDAQ 240

Query: 241 C----IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGRI 300
                +H QQ+N  Q+ W   EE+Q +RM +Q+ YLQ LH+Q+LE    +Q + NIA R+
Sbjct: 241 SNIPYLHSQQLNQNQISWRNMEEEQYHRMQQQYVYLQQLHDQRLEAQHLVQGNGNIASRL 300

Query: 301 SSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKV--- 360
           +  N +  ++EVPI+H LEQSN E  W      RG  + N   S    + VQ ++KV   
Sbjct: 301 TRPNPRHPHFEVPISHRLEQSNQERIWNNYVVPRGPHESNPALSYTDFNGVQFLDKVGKQ 360

Query: 361 SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCRD 420
           SFP+KIL RS GMNT+ A+RF S+  D+S  H++Q   +  N  FR + LST N    + 
Sbjct: 361 SFPKKILTRSQGMNTLKAVRFGSVGTDESLTHISQNGKVVSNGHFR-HALSTRNTGCFQL 420

Query: 421 HSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGCRFL 480
            S   +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHGCRFL
Sbjct: 421 DSLNTWGMFPSLMHLKNTDMKVLPQKYTDLKTLPQKYNSMDEITGRIYLMAKDQHGCRFL 480

Query: 481 QRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNHG 540
           QRKF EGT +D+E IF EIID +VELM D FGNYL+QKLLEVC+++Q+MQIL  IT+  G
Sbjct: 481 QRKFSEGTPKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCDEDQQMQILHSITKKPG 540

Query: 541 ELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYLM 600
           ELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIV L+KN NGNHVAQ CL YL 
Sbjct: 541 ELVRISCDMHGTRAVQKVIETLKTPEQFSMVVSSLKPGIVMLIKNTNGNHVAQRCLQYLT 600

Query: 601 PSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQYG 660
              RE LF AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQD +G
Sbjct: 601 REYREFLFVAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQDPFG 660

Query: 661 NYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFA-GGQITKIVLELI 720
           NYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++A   +  +I+ ELI
Sbjct: 661 NYVVQFVFELQLPWATLDILDQLEGNYGDLSVQKYSSNVVEKSLKYACEERRIRIIQELI 720

Query: 721 NDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
            +PR D++MQDPYGNY +Q AL+ ++G LH+KLV+AI+PH+PVLR SPYGKK+L+
Sbjct: 721 ENPRLDQVMQDPYGNYVVQAALSQSKGILHSKLVDAIKPHMPVLRTSPYGKKILS 773

[Close]

BLAST of CSPI01G29210 vs. NCBI nr
Match: gi|595840720|ref|XP_007208073.1| (hypothetical protein PRUPE_ppa001655mg [Prunus persica])

HSP 1 Score: 622.1 bits (1603), Expect = 1.3e-174
Identity = 368/779 (47.24%), Postives = 483/779 (62.00%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGNADPE-----------GLSSISVSSYEGSSMRD 60
           MEE   E EF++  K +G +IPN  S N   E            LS I V+SY+      
Sbjct: 1   MEEGRTELEFDEFEKLLG-EIPNATSVNPHSEESGIKSVSLNGSLSPICVNSYKRPLSDK 60

Query: 61  YHSNGNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNF---------GDES 120
            H+NG   +G  S+  +Q+S +         +P D+SLT AF  L+F           E 
Sbjct: 61  LHTNGRRNEGKNSVKKIQKSPVARGQPEVANLPDDRSLTSAFAGLSFDGGVTVEAGSHEE 120

Query: 121 KVRAWKSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNS 180
             ++ ++ +  L     ++L   + + D  V    ++ + N+   G ++   T +G ++S
Sbjct: 121 TCKSMQNFSFSLNGQIPNSLKTHISDSDAPVMVVPSFQAPNNTPCGFYEFDVTNIGQESS 180

Query: 181 P-SRYIPEQYKKWQTGQLQPFESLSPNAHLTHEV------ANVSGPNSQFPVASQRQQVL 240
             S++  E+ KK Q    QP E+LS    L H V      +NV GP  QFP+ S  QQ  
Sbjct: 181 NMSKFNSEELKKPQVVYSQPMETLSSAVPLAHAVQGFQFLSNVPGPGLQFPLTSDPQQFF 240

Query: 241 HNGRRCI---HPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENI 300
            + +  I     QQ+N  QV W   EE+Q YRM +++ Y+Q LH+Q+LE    +Q   NI
Sbjct: 241 LDAQSRIPYLRSQQLNQNQVSWRNMEEEQYYRMQQRYVYMQQLHDQRLEAQHLVQGSGNI 300

Query: 301 AGRISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEK 360
           A R++  N +  ++EVPI+H LEQSN E         RG  Q N   S   ++ +Q  +K
Sbjct: 301 ASRLTCPNPRHPHFEVPISHRLEQSNQERVRNNYVIPRGPHQSNPALSYTDLNGIQVFDK 360

Query: 361 V---SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANEC 420
           V   SFP KIL RS GMNT+ A++F ++ AD+S  HV+    +  N  FR +  ST N  
Sbjct: 361 VGKQSFPEKILTRSHGMNTLKAVKFGAVGADESLAHVSHNGKVLSNGHFR-HTFSTQNTG 420

Query: 421 MCRDHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHG 480
             +  S + +   PSL                  K +P+++NS+DE+ GRI+LMAKDQHG
Sbjct: 421 CFQLDSLSTWGMFPSLMHLKNTDMKALPQKYTDMKALPQKYNSMDEITGRIYLMAKDQHG 480

Query: 481 CRFLQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRIT 540
           CRFLQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC + Q+MQIL  IT
Sbjct: 481 CRFLQRKFSEGAQKDVENIFFEIIDHIVELMTDPFGNYLIQKLLEVCGEVQKMQILHSIT 540

Query: 541 QNHGELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCL 600
           +  GELV ISCDMHGTRA+QKVIETLKT EQ  M+VS+LK GIVTL+KN NGNHVAQ CL
Sbjct: 541 KKPGELVRISCDMHGTRAVQKVIETLKTLEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCL 600

Query: 601 DYLMPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQ 660
            YL P  RE LF+AA  +CV+LA DRHGCCVLQKCLS SD+  R+ LI EIT NALI+SQ
Sbjct: 601 QYLTPEYREFLFEAATTNCVELATDRHGCCVLQKCLSHSDAEQRNRLICEITSNALILSQ 660

Query: 661 DQYGNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAGGQ-ITKIV 720
           D +GNYVVQF+ +L L WAT  IL QLEGNYGDLS+QKYSSNVVEK L++AG +   +IV
Sbjct: 661 DPFGNYVVQFVFELQLPWATVDILDQLEGNYGDLSVQKYSSNVVEKSLKYAGEERRVRIV 720

Query: 721 LELINDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
            ELI +PR D+IMQDPYGNY IQ AL+ ++GT H+KL++AI+PHVPVLR SPYGKK+L+
Sbjct: 721 QELIENPRLDQIMQDPYGNYVIQAALSQSKGTFHSKLMDAIKPHVPVLRTSPYGKKILS 777

[Close]

BLAST of CSPI01G29210 vs. NCBI nr
Match: gi|694315519|ref|XP_009375976.1| (PREDICTED: pumilio homolog 12-like isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 621.3 bits (1601), Expect = 2.1e-174
Identity = 365/776 (47.04%), Postives = 485/776 (62.50%), Query Frame = 1


Query: 1   MEEMPNENEFEDIAKYIGNQIPNVASGN--ADPEG-----LSSISVSSYEGSSMRDYHSN 60
           MEE   E EF++  K +G +IPN  S N  +D  G     LS I V+S +G     +H+N
Sbjct: 1   MEEGRTELEFDEFEKLLG-EIPNATSRNTHSDESGTKNASLSPICVNSCKGPLSEKFHNN 60

Query: 61  GNLMDGNISMSTLQQSSMDHTSTRQNFVPGDQSLTRAFEKLNFGDESKVRAW-------- 120
           G +  G  S + +Q+S +         +P DQSLT A   L+F     + A         
Sbjct: 61  GRIDGGKNSANKIQKSPVKRVQQDVTNLPDDQSLTSALAGLSFNGAVNMEAGSHVENSKS 120

Query: 121 -KSRAILLENHYSDNLSKQLQNIDPSVFA--AWSSSNHLTNGVHDSHSTRLGHQNSP-SR 180
            ++ +  +     ++L  Q+ N+D  V    ++ + N++  G ++  +   G ++S  S+
Sbjct: 121 LQNYSFSMNGQIPNSLKTQVSNMDTPVMVVPSFQAPNNIPCGFYEFDAINAGQESSNMSK 180

Query: 181 YIPEQYKKWQTGQLQPFESLSPNAHLT------HEVANVSGPNSQFPVASQRQQVLHNGR 240
           +  E+ KK Q    QP E+LSP   L       H ++NV  P  QFP+ S  QQ      
Sbjct: 181 FNSEELKKPQAAYSQPIENLSPGVPLAPAVQGFHFLSNVPAPGLQFPLTSDHQQQFFLDA 240

Query: 241 RC----IHPQQMNHRQVGWNYAEEDQLYRMHEQHPYLQHLHNQQLERLLPIQQHENIAGR 300
           +     +H QQ+N  Q+ W   EE+Q YRM +++ YLQ LH+Q+LE    +Q + NIA R
Sbjct: 241 QSRIPYLHSQQLNQNQISWRNMEEEQYYRMQQRYVYLQQLHDQRLEAQHLVQGNGNIASR 300

Query: 301 ISSQNRKPQYYEVPIAHHLEQSNHEPTWKPSAFCRGSDQLNSVFSTHYMDTVQGMEKV-- 360
           ++  + +  ++EVP    LEQSN E         RG  Q N   S    + +Q ++KV  
Sbjct: 301 LTCPSPRHSHFEVP----LEQSNQEQIRNNYVVPRGPHQSNPFLSYTDCNGIQVLDKVGK 360

Query: 361 -SFPRKILGRSPGMNTVDAMRFMSMDADKSSNHVNQCRFLRPNSFFRPNNLSTANECMCR 420
            SFP KIL RS GMNT+ A++F ++  D+S  HV+Q     PN  FR + LST N    +
Sbjct: 361 QSFPEKILTRSHGMNTLKAVKFGAIGTDESLTHVSQNGKALPNGHFR-HALSTQNTGRFQ 420

Query: 421 DHSSAMYSESPSL------------------KLVPERFNSVDEVRGRIFLMAKDQHGCRF 480
             S   +   PSL                  K VP+++NS+DE+ GRI+LMAKDQHGCRF
Sbjct: 421 LDSLNTWGMFPSLMHLKNTDMKALPQKYTDLKTVPQKYNSMDEITGRIYLMAKDQHGCRF 480

Query: 481 LQRKFMEGTDEDIEKIFKEIIDRVVELMMDAFGNYLVQKLLEVCNDNQRMQILRRITQNH 540
           LQRKF EG  +D+E IF EIID +VELM D FGNYL+QKLLEVC+++Q+MQIL  IT+  
Sbjct: 481 LQRKFSEGAQKDVENIFSEIIDHIVELMTDPFGNYLIQKLLEVCDEDQQMQILHSITKKP 540

Query: 541 GELVMISCDMHGTRAIQKVIETLKTQEQVHMIVSALKSGIVTLMKNINGNHVAQHCLDYL 600
           GELV ISCDMHGTRA+QKVIETLK  EQ  M+VS+LK GIVTL+KN NGNHVAQ CL YL
Sbjct: 541 GELVRISCDMHGTRAVQKVIETLKIAEQFSMVVSSLKPGIVTLIKNTNGNHVAQRCLQYL 600

Query: 601 MPSCRELLFDAARNSCVDLAVDRHGCCVLQKCLSCSDSTDRDNLINEITQNALIISQDQY 660
            P  RE LF AA  +CV+LA DRHGCCVLQKCL+ SD+  R+ LI EIT NALI+SQD +
Sbjct: 601 TPEYREFLFAAATTNCVELATDRHGCCVLQKCLNHSDAEQRNRLICEITSNALILSQDPF 660

Query: 661 GNYVVQFILKLNLRWATEAILKQLEGNYGDLSMQKYSSNVVEKCLQFAG-GQITKIVLEL 720
           GNYVVQF+ +L L WATE IL QLEGNYGDLS+QKYSSNVVEK L++A  G+ T+I+ EL
Sbjct: 661 GNYVVQFVFELQLPWATEDILDQLEGNYGDLSVQKYSSNVVEKSLKYADEGRRTRIIQEL 720

Query: 721 INDPRFDKIMQDPYGNYAIQTALNNTEGTLHTKLVEAIRPHVPVLRMSPYGKKVLA 726
           I +P  D++MQDPYGNY +Q AL+ ++G LH+KLV+AI+PHVPVLR SPYGKK+L+
Sbjct: 721 IENPHLDQVMQDPYGNYVVQAALSQSKGILHSKLVDAIKPHVPVLRTSPYGKKILS 770

The following BLAST results are available for this feature:

BLAST of CSPI01G29210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PUM12_ARATH	8.8e-112	45.94	Pumilio homolog 12 OS=Arabidopsis thaliana GN=APUM12 PE=2 SV=2	[more]
PUM8_ARATH	1.8e-88	49.38	Putative pumilio homolog 8, chloroplastic OS=Arabidopsis thaliana GN=APUM8 PE=3 ...	[more]
PUM7_ARATH	3.4e-87	49.20	Putative pumilio homolog 7, chloroplastic OS=Arabidopsis thaliana GN=APUM7 PE=3 ...	[more]
PUM11_ARATH	2.1e-76	45.48	Pumilio homolog 11 OS=Arabidopsis thaliana GN=APUM11 PE=3 SV=2	[more]
PUM9_ARATH	8.1e-73	44.65	Pumilio homolog 9 OS=Arabidopsis thaliana GN=APUM9 PE=2 SV=1	[more]

BLAST of CSPI01G29210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LX44_CUCSA	0.0e+00	89.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G599470 PE=4 SV=1	[more]
M5W697_PRUPE	8.7e-175	47.24	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1	[more]
U5GNJ8_POPTR	4.3e-174	47.76	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03990g PE=4 SV=1	[more]
B9SBN7_RICCO	7.4e-174	47.61	RNA binding protein, putative OS=Ricinus communis GN=RCOM_0342930 PE=4 SV=1	[more]
M5WJ63_PRUPE	1.6e-173	47.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001655mg PE=4 SV=1	[more]

BLAST of CSPI01G29210 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56510.1	5.0e-113	45.94	pumilio 12	[more]
AT1G22240.1	1.0e-89	49.38	pumilio 8	[more]
AT1G78160.1	1.9e-88	49.20	pumilio 7	[more]
AT4G08840.1	1.2e-77	45.48	pumilio 11	[more]
AT1G35730.1	4.5e-74	44.65	pumilio 9	[more]

BLAST of CSPI01G29210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659100267\|ref\|XP_008451010.1\|	0.0e+00	93.48	PREDICTED: pumilio homolog 12-like [Cucumis melo]	[more]
gi\|778663304\|ref\|XP_004144136.2\|	0.0e+00	89.35	PREDICTED: pumilio homolog 12-like [Cucumis sativus]	[more]
gi\|694422736\|ref\|XP_009339193.1\|	4.2e-178	47.87	PREDICTED: pumilio homolog 12-like [Pyrus x bretschneideri]	[more]
gi\|595840720\|ref\|XP_007208073.1\|	1.3e-174	47.24	hypothetical protein PRUPE_ppa001655mg [Prunus persica]	[more]
gi\|694315519\|ref\|XP_009375976.1\|	2.1e-174	47.04	PREDICTED: pumilio homolog 12-like isoform X1 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR016024	ARM-type_fold
IPR001313	Pumilio_RNA-bd_rpt
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0005488	binding
GO:0003723	RNA binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0005488	binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G29210.2	CSPI01G29210.2	mRNA
CSPI01G29210.1	CSPI01G29210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001313	Pumilio RNA-binding repeat	PFAM	PF00806	PUF	coord: 554..574 score: 6.7E-4coord: 518..549 score: 3.4E-7coord: 626..647 score: 4.3E-4coord: 403..437 score: 2.6E-8coord: 445..476 score: 2.
IPR001313	Pumilio RNA-binding repeat	SMART	SM00025	pum_5	coord: 479..514 score: 0.0025coord: 367..402 score: 1.0E-4coord: 515..550 score: 5.8E-6coord: 442..478 score: 0.0066coord: 551..586 score: 0.42coord: 587..621 score: 1.4coord: 403..438 score: 9.7E-9coord: 624..659 score:
IPR001313	Pumilio RNA-binding repeat	PROFILE	PS50302	PUM	coord: 403..438 score: 12.49coord: 367..402 score: 8.711coord: 587..610 score: 5.934coord: 510..550 score: 9.83coord: 439..478 score: 9.364coord: 622..659 score: 8.594coord: 479..502 score: 5.421coord: 551..586 score: 9
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 365..683 score: 4.6E
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 364..682 score: 6.91E
None	No IPR available	PANTHER	PTHR12537	RNA BINDING PROTEIN PUMILIO-RELATED	coord: 1..21 score: 6.9E-177coord: 334..681 score: 6.9E
None	No IPR available	PANTHER	PTHR12537:SF13	SUPPRESSOR PROTEIN MPT5	coord: 334..681 score: 6.9E-177coord: 1..21 score: 6.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI01G29210	Cp4.1LG18g02710	Cucurbita pepo (Zucchini)	cpecpiB362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G29210	Cucurbita pepo (Zucchini)	cpecpiB655
CSPI01G29210	Bottle gourd (USVL1VR-Ls)	cpilsiB059
CSPI01G29210	Melon (DHL92) v3.6.1	cpimedB036
CSPI01G29210	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G29210	Silver-seed gourd	carcpiB0536
CSPI01G29210	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G29210	Watermelon (97103) v2	cpiwmbB043
CSPI01G29210	Wax gourd	cpiwgoB097
CSPI01G29210	Cucumber (Gy14) v1	cgycpiB208
CSPI01G29210	Cucurbita maxima (Rimu)	cmacpiB084
CSPI01G29210	Cucurbita moschata (Rifu)	cmocpiB078
CSPI01G29210	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G29210	Melon (DHL92) v3.5.1	cpimeB042
CSPI01G29210	Watermelon (Charleston Gray)	cpiwcgB049
CSPI01G29210	Watermelon (97103) v1	cpiwmB022