CSPI01G26480 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGAAAGAACAAAAATGTTTGACTTCAATCATTCATTAGAAAAGACCTAATTTTTAATTTGCAGATTTGCTGACATTCCATTGAGTCCCACCTCCCCACAATCATGAACTATCTTCTACTTTGTTTGGTGAAGAAATGGCCGATCTGATTCAACCACTTGTCTCACTCCATTACCAGTTCTTCAACCTCCATTACTATGCATTTTCATCAGCTCCACACACAGCCTTCAAATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCATCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTCAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTGTGAGTTTTGTGTGTCTACTTTAACTTGTTTTATGGGATTTGATTAGTTAAATTATAAATTTGGTTCCTATGTTTTGGGAAAAGTTAGAAGGTAGAACCAATTCTCATGAATAGTCCCAATAGTTTGATAAAATCCTTATAAACAGTAATCAACAGTTATCTACTGGAGGAACTATTTATAAAAATTGTGATAAATTTCACAAAATGGAGTATCTAAGATCTAAGATTGCCTTCCTTCTAACTAAGGCAATTGGTGCTAGGCACAAAATGTGGAGGTAGAAAGTCGAAAGCATACACAGTCTCGAATCCCAATTAGCTCATGGACGAGCATAGGGACTAAACTATAGTTATAAACTACAAGGACTAAATCCAAACTTTCCCCGAACTGTAAAGTGTTAAACTTTGTAGATAGGACTGGTTGGGTTTATGTGTTTAGGTAGGAATTTTTTACACCAAGAGTTCATGCATCTTTTATTTCTCGATTGGTGTATGCCACATGTCATCTGATTTATTTATTGAATGTCCAAAATGGATTGAGAGTTTAGTTTATTAACTCCTACTCGCTTTAGTAATGTAACAGATACCTGACATTCATGGATCACAAAGACACAAATGTGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGTCTATCTTTACACTATGAAAAACTGTTGTTTATGATATTTGTGACATTTGATGTGGACTTATAAATGGTGTATGGTATTCAAATTGCAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGCTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTGAGTTCTTTCTTCTTTTTCTTTTCCTCGAAAAAGAACCACTGGAGTTTTAGGTGAGATGTGACAAGTTTTGCATTTGGCAGGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGTATGACAAAGACAAACTGTTTGGTGCATCAAATGCAATTCTGTTTTCACATCATTTCCATGGACGTGAAAGGCTTTTGCTAGACCATAAGCTTTGAGCTAAAATGAAAGTTTTAGTGCTAATTGTTCTAAAAAGCCTGAAAAAGCATGATTTGTGTTGAAGCTAGATCATTTGACTCCCCATCTTGTTGAGTATGTGCTTCTTTTTAACAAACTAAATCAAATGAAGAACTTAAACAGACATTGTAGCCTCTCTTTTATTAGATCTTTTCACCTGAAGTTTGTTCATTCTCTCTCTATTTGATGTGAAAACATGGAAAAAAGATTAAACTTAAGAAGAAAATATGAAAGGAGATTGAGATCTTTGGGATTTAATTATATAGTTTTCTTAAAAAATATTAATAAAAAAACTCAAAACTCCAAATGTTCTTTTCTCAATGAAAAGTTGTTTTCATTTCCTCCCTCTCTCTGCTGAAAGATAAGGAAATATTGATGTTTCTGATCTGCACTTTTCCCCTTCAAAATCATTGTTTGCTAATTACTCGACTTTTTTAATGTAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGTAATCTTTTTCTTAGGTTGGTTTAGTGGTCAAAGGAACATACTGCAAACCTAATATCCTACTACTTGAAATCTATATGAAATTAGTTGAACAGTAAGTAAACTTAATGAATATTAGATTATATCAAACTCATTTTTTTTCTTTATGGTCATAATGAAAGTTTGACTTCTTTTATCCAAAAAAAAAAGTAAATATTCTTTTTTCATCGGTTGAAATTTTTAAGAACTGTTCATGATAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGGTTTTGTTTCTCTATCTTTCTCCACGATGTTGACATGAGATATTTTTTCGAACTTCCAAATTGAGCAATGTCATACTTATCTGATCCTTAAAATTTTGGGAATTTTTGTCCATTACATTATCTAACTTTGAAGTAAGGAAAATCACTTGGTCTTTGTTGCTAACATTATTGATAGAATGTTGACATGATATACCTATCAAATAACTACTAATTTATTTGACACGACATAATAAAGCAAATCCAAGTGAATTCAATCAATTCACTTGATACATTCATTCTCTTTTATATGTGTTTAGAGTAGATCAACCTTCCATGTACAACATTAATTATCGATATTGAATAGAATCATAATTCAAAGTTCAAACATGATCTAGATCTTTTAAAGCTTAGAGACTAAATAGATCCAATGCTAGGGACTAATTATGATATTCAACCATTTTGTGCTTTAAAGTACGAAGTGGAAGCTAAACATGTGATCTTTACAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAATCATCAGGGAATGCTGTGGGTGAAGAACAAAGCTTTGGCAATTATGATACCTTCACTCTAATTTGACAACTTAGAAGAAGAATCAATTGGAACCATCATTTTAAATGGTGCCCCAGTTTCTTAATCTCTCTTTAAATAAAGCGATATGGGGTGAAATACAAAGGATAAAATTACAAATTCAGTTCTCATAGATTGAAGAAAGTTCTAACTTATTTTTTG ATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCATCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTCAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTATACCTGACATTCATGGATCACAAAGACACAAATGTGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGCTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAA ATGGGTAAACCTTCAATCTCTCTCAAACTCACCATTTTCCTCTCCCTCTCTCTTTCAGTCACCCCCTTTGCTCTTTTTCCCAATTACAACAAACCATCCCCAATTCCCAAAGCTACTCCCTCCGATTTGCTCAATCTTCTCGGTTCTAAATCTCAAGCTTCTTCTGTGAATCCTGGTGTAGCGAAGGAGCTGAAATCTTGTTTCAAATTCCTTGTTCCCTTCCATCCAACCCCATCCAACGCGAAATTATCCGGTAGACGGAGCTTGAGATCGACGGGATTTGATGATCGGAGTTGGAGAGAGGAGGATGAGCTCGTTTGGTGGCCACCTCAGTCGGTTCTTGAACTCGCTCGACTTGGTGTTGATTCTGGTGGAGACCCTGGGGCTATTCATCGCACCCTTGATCCTGCTATAATCCCTATACCTGACATTCATGGATCACAAAGACACAAATGTGAACTCACAAGAACGCCATATGGGAGACGCTTTATAAGCGAGGAACTAAATTCATACCTTCAGTTCCTGTTTGAGCTCATTGCTGCTCGATCTTCTGCTATGGGGTTTAACATTAAATTGAACCGTTTCGATTTATTCCATGGTCATCTTTTTCTTGCCTTTGACAACAACAGGCTCGGTATTTTGTTTCATGCCAAGGAATACCCAGCTTATGAAAAGGAAACTTTTCCGTGCAACATGGGTTATTGTCAAATAGGATCTAATGTATCCTATGATGATTCAATGAACTTGAGAAATATCCTCTGGCTGGCACCAATGCCCAGCAGTTCTACTAAGGACTGGGAGGCTCCAGGGGTTCTTGTGGTGTTGGATGCTCATCCAGATGGAATCATATACAGAGATATCATACCTGACTATGTACATATAGCAAGAACTGTTTACGAAGATGATCTTGGAGACACTGTGGTTGATGTCAATTACTTGGATATTGGCAATGCTTTGGCAAATTATCAAATCTTCATATGCTAA
BLAST of CSPI01G26480 vs. TrEMBL
Match: A0A0A0LW06_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569420 PE=4 SV=1) HSP 1 Score: 672.9 bits (1735), Expect = 1.9e-190 Identity = 325/327 (99.39%), Postives = 325/327 (99.39%), Query Frame = 1
BLAST of CSPI01G26480 vs. TrEMBL
Match: A0A061F485_THECC (T-box protein 41 OS=Theobroma cacao GN=TCM_026654 PE=4 SV=1) HSP 1 Score: 451.1 bits (1159), Expect = 1.2e-123 Identity = 220/335 (65.67%), Postives = 263/335 (78.51%), Query Frame = 1
BLAST of CSPI01G26480 vs. TrEMBL
Match: I1JRA6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_03G235700 PE=4 SV=1) HSP 1 Score: 450.3 bits (1157), Expect = 2.0e-123 Identity = 224/335 (66.87%), Postives = 261/335 (77.91%), Query Frame = 1
BLAST of CSPI01G26480 vs. TrEMBL
Match: A0A067JHX4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23310 PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 5.0e-122 Identity = 212/341 (62.17%), Postives = 264/341 (77.42%), Query Frame = 1
BLAST of CSPI01G26480 vs. TrEMBL
Match: V4TAQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10001711mg PE=4 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 5.0e-122 Identity = 219/341 (64.22%), Postives = 264/341 (77.42%), Query Frame = 1
BLAST of CSPI01G26480 vs. TAIR10
Match: AT5G27710.1 (AT5G27710.1 unknown protein) HSP 1 Score: 418.7 bits (1075), Expect = 3.3e-117 Identity = 201/330 (60.91%), Postives = 252/330 (76.36%), Query Frame = 1
BLAST of CSPI01G26480 vs. NCBI nr
Match: gi|449435655|ref|XP_004135610.1| (PREDICTED: uncharacterized protein LOC101205785 [Cucumis sativus]) HSP 1 Score: 672.9 bits (1735), Expect = 2.8e-190 Identity = 325/327 (99.39%), Postives = 325/327 (99.39%), Query Frame = 1
BLAST of CSPI01G26480 vs. NCBI nr
Match: gi|659099497|ref|XP_008450628.1| (PREDICTED: uncharacterized protein LOC103492159 [Cucumis melo]) HSP 1 Score: 647.9 bits (1670), Expect = 9.5e-183 Identity = 314/327 (96.02%), Postives = 318/327 (97.25%), Query Frame = 1
BLAST of CSPI01G26480 vs. NCBI nr
Match: gi|694403331|ref|XP_009376621.1| (PREDICTED: uncharacterized protein LOC103965306 [Pyrus x bretschneideri]) HSP 1 Score: 463.8 bits (1192), Expect = 2.5e-127 Identity = 229/339 (67.55%), Postives = 268/339 (79.06%), Query Frame = 1
BLAST of CSPI01G26480 vs. NCBI nr
Match: gi|1009116900|ref|XP_015875026.1| (PREDICTED: uncharacterized protein LOC107411874 [Ziziphus jujuba]) HSP 1 Score: 462.2 bits (1188), Expect = 7.4e-127 Identity = 225/337 (66.77%), Postives = 268/337 (79.53%), Query Frame = 1
BLAST of CSPI01G26480 vs. NCBI nr
Match: gi|645222078|ref|XP_008246424.1| (PREDICTED: uncharacterized protein LOC103344596 [Prunus mume]) HSP 1 Score: 461.5 bits (1186), Expect = 1.3e-126 Identity = 226/340 (66.47%), Postives = 267/340 (78.53%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |