CSPI01G26210 (gene) Wild cucumber (PI 183967)

NameCSPI01G26210
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 21522733 .. 21527575 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGATTTAGAAAAGGATACTCTTAGCGCTCAGTTAGTTGGAACGCAAACTCCTCAGAAATTTCTCTATCATTTTCTCTCGACCCTCTTTGTTTAAACCATGGACTGTATCATTAACTGCAATTCAAACCCTAAGTCGAGAGTGTCATCTATAATCTTCGCCTCTCGGTTGCAAGATCTTGAAGAATTTGACGACGTACGATGGATCCGAGCACCTCCTCCACCGCAAACAACGAAAACACGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTCAAAATGGCTCAAAGAGAATTTGTCCCGACTCATCTCCTCTACCGACAAGGTGGGCTAATTAGCTTTCTTTAATTGCTGTTTGTGTTTATATTGGTTGTTATATAGATAAATTTTGAATTCTGCTAGGAATTAAATGTGGGTGTTTTTCCCCCTTAATAAAATTTAGTTTATTTTTCCAGTTTTGGGGTTCTTACCTCTAGGTGTTCCGAAGTTATTTGGAAAGAACATGGACCTCAAATTCTCCTACAGGTACTTCTATATATTTTGTGTATTTTAATCCTAGAATAACAACAAAACAACATGAGCTGCTGTTCTGTTTTCCTTTCTCGAGTTTTCTAACAAAAACAACCGATTGTTTTTTCAGGTACTCAAGGAAATGGAGAAGAAGCAGACTTTCGCCGGCCTTTACTCTCTTCCAACATCACCAAGCTGGTCAATATTTTAATTATACAGTTTACTCATATCATTTCTACGTAACAGTACCTTGTGTGTTTCTCATGTACAGTAGCTTCATTTTCCTTTTAGCTATGGACCTGACAGTACACCACTTGAGCTTGCGATTGGAGTAGTAGTTAACCGTTTCATGGTTAAAGAGGGGCCAACATTGGAACATGAATCTCGCCAACAAGTAAGAATATTACATTTTAATTTTAGACTTTGATCTATCACAAAAGAAAAAAAAGGTTTTTGGAAGAATTCATTTTTAAAGAAATGATTTTGATAAAAAAAAAAAGCTTGTTTAAAATATACTATTTTTGTGTGGTTACTGCACACCTAGTCTTTTTAAAAATGTTTAATTTGTGGAAAAATTTAAACATCTCATTCATTCTAGAGCTTTCTCAATATGTAGTAGTAATTGTCGGTTGAACTCAACAAACACACGCATTTGAATAATTATAATCAAATCTTGAAAAGTCGTATATTAGGGATATCAATTTGCAGGTATTAAACTATCCATTGGGTATCTATTAGATTCAACAAACACCTATACCCAACCTATCTAAGCTAGAAGGGTAAAATATAATTTTATTAAAGAAGTAGGAACAACAAAGTTAAATAGGAAACAAAATATTCTCCTACATTACTCCCTTTCATGTGAAATAATTGTATAGTTCTATTTTTTGTTTACATAATGCAATAACTTTTATTCTAAATATTATTATATGTCTATCACGAAGTTATACAAATGTACTCGTTATCTCACTGTAAGTATTAACTACAACTTTCATTCAATTATATATATATAGATAGGTCATAGGTGTGTATATATATATTTGTATTTTATATGAACTTTGAATTTTCAGTAATATTTTTTTTGAAATAAGCAAATAAAAGTATTTATTTTGTTTTTCTTTTACACGTGCATCTCACATATACATTGGAAGAATTGATGCATTCTACCTATTCAATATGTGTAACTATCTTCATCTAAAATATATAGATACGTTGATATGTCATATATTGCATTATATTTCAAAGAGTATCATATGTAGTGTCCTATCAACAACAATTACAATCTTTCGAATGAACACGTAGATTCGAAAAGTTGCAACCACTAAACAATGAGTAATATGGTAAACTAAAGAAAATGTAAGGAAAAAAGAAGCATGTATTCCCTTTATGCACTTTGAATGCAGTAGAGATTATATGTGTTTAGATATTATGTTCTCAACATTTTGTGCAAGAAGTAAAAGCATGTAAAATTTATTTAGTTTCTTTTTATTTTAAAAAGGGAAACATATGTTTGTTTGATGTTAGAGATGTTATTAGTTCTTTAGTTATCATTTCTTTCTGTCACTAAAGGTTACTTTTAGGAGATAATATTCTTTCTCAACAAGAATTACATCCAATAGAATCTTTTAAACGTATTATCTTTAAAATATCTCCGTTTCGAAGTTCTTTATTCTTATAAAAAGGGATAAACGTTGCTCTTCACAAGACATTTATTCAAGACGCTTTCAGACTACTTTCATTGAAGAATCTTTGCGAAGGTATACCTTCTTAGATATCTTATGAAGATTGTTTAATATCTTCAAAGACAACATAAGATGCATTCTTGATGATAAATTGAAAGAAAACTTAGTACATTGAGATAGGTTCAATTACTTTTTCAAGGGAGTTTGACCACCTTCCACTACAAGAAAGTCCAATTATTTTTAGTTTATGGAAAAAAACTAAAAGAGTACTAAATCTAGGAAACCGTCTTCTAGATTGTTGTGTGTTCATTGTTACTCATTTGAATCTTATAAAATCTTCTTATGTAAACTACCAAAGCACTTCGGAAGTATCGTGGGTTATCAAAGTTACATTGAGTTATTTATTCCTTTTGTTCTCTAAAACTAAAGTAACATTTAAAGATGAATTATATTATTTTACTCCTCATCAAGTAATTCATGATTAATTTTTCAGGTAAGCAAGGAATTAAATGAGATTGCATACAATCAACTCAAACTTCTTCCACAAACATTAAGGTCAGTGTTATAATATCACAATACAAACATCGTAATTTTTGTGTAATTTTATTGCCTTTTAGGTATATGTTATGTTTTTTTTTTAAAAAAGATACAATTAGTCAGTAGGTGCACCCGAACATCTCTACTAGGTGGACACCCCCTTAGCACATTCATCATTCCCGCTTTTAGGTACATATTATGTTAGAAATCAATTACTTCCTTTTTCTTAAACATCCTTACTATACCTCTTTCATCTCTAATTCAATATCACTGCGAGGTTAGACATTTTTTTATGCACAATTTTTTTTTTGTTTTTTTGACGATCATGACAAAAAGTAAAGACCCAACTTTTCGGAGTTTGAGGTTCCCTATTACTTAAATAAATAACATTTTTAAACTTTAAAAACAAAGAAAATTCTACTTGTTTTATTAAATAAAATGTAATACAAACCATCTAAAAACAAAAGTTTGGCAAACCAACAACAAAGAAAAACTACCCAGAAAATAAGCTTAATTAATACCCTATTTAATTTTAAAGAAAATAGTGAAAATAGCGAAAACATGAACATATATAGAGCCCTCATATGACATGTTCATGGATTATGGGTGGGTATATAAATATCTAGGATCCAATTACTGGTCTAGTAAACTCTTAACTTCTTATTAGAAGATATCCCGAGTCATATAAGTCTAGTGATCCTGTAGGAACACACATCAAATCATAAAGTGTAAGTGAACCCATTCACCGTCAATCAATAGTCAATATTAGTCTAAAGGTGGTGAGGATATATATTAGTCCTAATAGCTAAAGCTAACAACTACCATCCGTACAAACAATCTAAGGCATAAATTTATCAATTTAATTAACCTTGCCTTTGCCAACTTATCCAAACGGGGATTAACTAAATTTCATTCCAAAGTTAATGGAAAATCAAGAAACCAATTCAAAGAGCTCCAATTGCATCTTCAAAGAAAAATCTAAGAAACCAAAAAAATAATCCAATCTTAAAAATGTCTACTAAATGGGTAACCAAAAACCCATAAACGGGCTCCTTGCTCGCGACTAGGGGAGACGGCTTGCAAATGAACGTAGAAGGGGAAAGAAGGCTCATGCAGCTCGGCATTGGCGTAGCCGGAGGTGGGCTGAGGTGGTGGCGGCTAGGGTTTTTCCATTTCTTTTAGTTAGCACAACTTTAAACCCTACTTGCTAAAAAATATATATATATATTAATATATACTTTAATCAACTCTCTCTTCATTTAATTTTATCTCTTCCATCAGATCAACCCTTCCCTTATTATTAAATATTTTCCAACAACTATCTTTTCTTTTCACAACCAAATATAAATATGCACACCAAACCCACCATCTTAATTCAATATACCTAATTAATTTCAAATAAAAGTACACCCAACATCAACTCAACATAAATAAAATTTCATTAATTTGGACTTTAGCTCTTCAAGTAATGTGTTTTTCATTATTTATATGTTTTCGCATAACATCTTGTGCTGGTTTTTTCCTGTTTATGATTTAACAATATATAAATAGCAATCAACATGAGGGAGGACCTGGAAGTGGAACATGGAAACTCAGATTACGTTTCTGCAATAAAATTGCCAACGTCATGTACCACAAGGATAAGATAAAGGCTATAGATGAGGAGCCATTGAAATTTGAAATTTGTGATGCCTACCACAACACTATCATCCCTACCGGTTTATTATTGTCTGCTCCGGTCCAGTTCTTCCTCTTCCAACAACAAAATGATTCTAAAACACTTCCAACTCTTGTTTCAGCCGATAAACTAATTGAGTTGATGTCTTTCAATGTTCTCCAACAACATCGCCTAGAAAATGGAATTGGCTATGTCAAAGATCTTATTGTCAATCCCCATTCGTATTGGATATCTAAGAAGTTTTTTTTAGTAGTCAAAGTTGTGGATGAACAGATTTTAATGAAGACTGGTGCCACCATTGAAGATGCCATTTCTGAACCTTTTACAGTTAAGACTAAACGAATGAAAGGTATGGTTATTACCTTTTACACTTAAGACTAGGCGCATGGATCCGGATCCTCAACTTTATCGTTTTTATATAATATATAA

mRNA sequence

ATGGACTGTATCATTAACTGCAATTCAAACCCTAAGTCGAGAGTGTCATCTATAATCTTCGCCTCTCGGTTGCAAGATCTTGAAGAATTTGACGACGTACGATGGATCCGAGCACCTCCTCCACCGCAAACAACGAAAACACGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTCAAAATGGCTCAAAGAGAATTTGTCCCGACTCATCTCCTCTACCGACAAGTTTTGGGGTTCTTACCTCTAGGTGTTCCGAAGTTATTTGGAAAGAACATGGACCTCAAATTCTCCTACAGGTACTCAAGGAAATGGAGAAGAAGCAGACTTTCGCCGGCCTTTACTCTCTTCCAACATCACCAAGCTGGTCAATATTTTAATTATACAGTTTACTCATATCATTTCTACGTAACAGTACCTTGTGTGTTTCTCATCTATGGACCTGACAGTACACCACTTGAGCTTGCGATTGGAGTAGTAGTTAACCGTTTCATGGTTAAAGAGGGGCCAACATTGGAACATGAATCTCGCCAACAAGTAAGCAAGGAATTAAATGAGATTGCATACAATCAACTCAAACTTCTTCCACAAACATTAAGCAATCAACATGAGGGAGGACCTGGAAGTGGAACATGGAAACTCAGATTACGTTTCTGCAATAAAATTGCCAACGTCATGTACCACAAGGATAAGATAAAGGCTATAGATGAGGAGCCATTGAAATTTGAAATTTGTGATGCCTACCACAACACTATCATCCCTACCGGTTTATTATTGTCTGCTCCGGTCCAGTTCTTCCTCTTCCAACAACAAAATGATTCTAAAACACTTCCAACTCTTGTTTCAGCCGATAAACTAATTGAGTTGATGTCTTTCAATGCGCATGGATCCGGATCCTCAACTTTATCGTTTTTATATAATATATAA

Coding sequence (CDS)

ATGGACTGTATCATTAACTGCAATTCAAACCCTAAGTCGAGAGTGTCATCTATAATCTTCGCCTCTCGGTTGCAAGATCTTGAAGAATTTGACGACGTACGATGGATCCGAGCACCTCCTCCACCGCAAACAACGAAAACACGAAGAAGAGATCAGTCTCTTCAGAGGAAGAAGCTCAAGAGGTTCAAAATGGCTCAAAGAGAATTTGTCCCGACTCATCTCCTCTACCGACAAGTTTTGGGGTTCTTACCTCTAGGTGTTCCGAAGTTATTTGGAAAGAACATGGACCTCAAATTCTCCTACAGGTACTCAAGGAAATGGAGAAGAAGCAGACTTTCGCCGGCCTTTACTCTCTTCCAACATCACCAAGCTGGTCAATATTTTAATTATACAGTTTACTCATATCATTTCTACGTAACAGTACCTTGTGTGTTTCTCATCTATGGACCTGACAGTACACCACTTGAGCTTGCGATTGGAGTAGTAGTTAACCGTTTCATGGTTAAAGAGGGGCCAACATTGGAACATGAATCTCGCCAACAAGTAAGCAAGGAATTAAATGAGATTGCATACAATCAACTCAAACTTCTTCCACAAACATTAAGCAATCAACATGAGGGAGGACCTGGAAGTGGAACATGGAAACTCAGATTACGTTTCTGCAATAAAATTGCCAACGTCATGTACCACAAGGATAAGATAAAGGCTATAGATGAGGAGCCATTGAAATTTGAAATTTGTGATGCCTACCACAACACTATCATCCCTACCGGTTTATTATTGTCTGCTCCGGTCCAGTTCTTCCTCTTCCAACAACAAAATGATTCTAAAACACTTCCAACTCTTGTTTCAGCCGATAAACTAATTGAGTTGATGTCTTTCAATGCGCATGGATCCGGATCCTCAACTTTATCGTTTTTATATAATATATAA
BLAST of CSPI01G26210 vs. TrEMBL
Match: A0A0A0LYF0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569170 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.3e-34
Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1

Query: 167 MVKEG-PTLEHESRQQVSKELNEIAYNQLKLLPQT-LSNQHEGGPGSGTWKLRLRFCNKI 226
           ++KE  P  E+E R+ V KEL+ IA  QLK  P   LS Q+E G GSGTWKLRL FCN+I
Sbjct: 102 LIKEKLPEWENEFRETVMKELDRIAQLQLKPPPPNPLSYQYERGSGSGTWKLRLHFCNQI 161

Query: 227 ANVMYHKDKIKAIDEEPLKFEICDAYHNTIIPTGLLLSAPVQFFLFQQQNDSKTLPTLVS 286
           A++MY KD+IK ID+ PL+ EI DAY+NTII TGLL SAP Q FLF+++NDSK  P  V 
Sbjct: 162 ASIMYPKDEIKGIDDNPLRLEIRDAYYNTIIDTGLLSSAPFQIFLFEEENDSKRSPDFVP 221

Query: 287 ADKLIELMSFNA 297
           ADKL ELMSF A
Sbjct: 222 ADKLRELMSFKA 233

BLAST of CSPI01G26210 vs. TrEMBL
Match: A0A0A0LWC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569160 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 4.6e-16
Identity = 45/46 (97.83%), Postives = 46/46 (100.00%), Query Frame = 1

Query: 148 YGPDSTPLELAIGVVVNRFMVKEGPTLEHESRQQVSKELNEIAYNQ 194
           YGPDSTPLELAIGVVVNRF+VKEGPTLEHESRQQVSKELNEIAYNQ
Sbjct: 92  YGPDSTPLELAIGVVVNRFIVKEGPTLEHESRQQVSKELNEIAYNQ 137

BLAST of CSPI01G26210 vs. NCBI nr
Match: gi|778662348|ref|XP_011659781.1| (PREDICTED: uncharacterized protein LOC105436267 isoform X2 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 5.7e-52
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1

Query: 194 LKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 253
           +KLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT
Sbjct: 6   IKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 65

Query: 254 IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 296
           IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN
Sbjct: 66  IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 107

BLAST of CSPI01G26210 vs. NCBI nr
Match: gi|778662351|ref|XP_011659784.1| (PREDICTED: uncharacterized protein LOC105436267 isoform X3 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 5.7e-52
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1

Query: 194 LKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 253
           +KLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT
Sbjct: 6   IKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 65

Query: 254 IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 296
           IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN
Sbjct: 66  IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 107

BLAST of CSPI01G26210 vs. NCBI nr
Match: gi|778662337|ref|XP_011659766.1| (PREDICTED: uncharacterized protein LOC105436267 isoform X1 [Cucumis sativus])

HSP 1 Score: 213.4 bits (542), Expect = 5.7e-52
Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 1

Query: 194 LKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 253
           +KLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT
Sbjct: 6   IKLLPQTLSNQHEGGPGSGTWKLRLRFCNKIANVMYHKDKIKAIDEEPLKFEICDAYHNT 65

Query: 254 IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 296
           IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN
Sbjct: 66  IIPTGLLLSAPVQFFLFQQQNDSKTLPTLVSADKLIELMSFN 107

BLAST of CSPI01G26210 vs. NCBI nr
Match: gi|700210943|gb|KGN66039.1| (hypothetical protein Csa_1G569170 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1

Query: 167 MVKEG-PTLEHESRQQVSKELNEIAYNQLKLLPQT-LSNQHEGGPGSGTWKLRLRFCNKI 226
           ++KE  P  E+E R+ V KEL+ IA  QLK  P   LS Q+E G GSGTWKLRL FCN+I
Sbjct: 102 LIKEKLPEWENEFRETVMKELDRIAQLQLKPPPPNPLSYQYERGSGSGTWKLRLHFCNQI 161

Query: 227 ANVMYHKDKIKAIDEEPLKFEICDAYHNTIIPTGLLLSAPVQFFLFQQQNDSKTLPTLVS 286
           A++MY KD+IK ID+ PL+ EI DAY+NTII TGLL SAP Q FLF+++NDSK  P  V 
Sbjct: 162 ASIMYPKDEIKGIDDNPLRLEIRDAYYNTIIDTGLLSSAPFQIFLFEEENDSKRSPDFVP 221

Query: 287 ADKLIELMSFNA 297
           ADKL ELMSF A
Sbjct: 222 ADKLRELMSFKA 233

BLAST of CSPI01G26210 vs. NCBI nr
Match: gi|778662354|ref|XP_011659790.1| (PREDICTED: uncharacterized protein LOC105436280 isoform X1 [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.2e-33
Identity = 81/132 (61.36%), Postives = 97/132 (73.48%), Query Frame = 1

Query: 167 MVKEG-PTLEHESRQQVSKELNEIAYNQLKLLPQT-LSNQHEGGPGSGTWKLRLRFCNKI 226
           ++KE  P  E+E R+ V KEL+ IA  QLK  P   LS Q+E G GSGTWKLRL FCN+I
Sbjct: 102 LIKEKLPEWENEFRETVMKELDRIAQLQLKPPPPNPLSYQYERGSGSGTWKLRLHFCNQI 161

Query: 227 ANVMYHKDKIKAIDEEPLKFEICDAYHNTIIPTGLLLSAPVQFFLFQQQNDSKTLPTLVS 286
           A++MY KD+IK ID+ PL+ EI DAY+NTII TGLL SAP Q FLF+++NDSK  P  V 
Sbjct: 162 ASIMYPKDEIKGIDDNPLRLEIRDAYYNTIIDTGLLSSAPFQIFLFEEENDSKRSPDFVP 221

Query: 287 ADKLIELMSFNA 297
           ADKL ELMSF A
Sbjct: 222 ADKLRELMSFKA 233

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LYF0_CUCSA8.3e-3461.36Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569170 PE=4 SV=1[more]
A0A0A0LWC4_CUCSA4.6e-1697.83Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778662348|ref|XP_011659781.1|5.7e-5299.02PREDICTED: uncharacterized protein LOC105436267 isoform X2 [Cucumis sativus][more]
gi|778662351|ref|XP_011659784.1|5.7e-5299.02PREDICTED: uncharacterized protein LOC105436267 isoform X3 [Cucumis sativus][more]
gi|778662337|ref|XP_011659766.1|5.7e-5299.02PREDICTED: uncharacterized protein LOC105436267 isoform X1 [Cucumis sativus][more]
gi|700210943|gb|KGN66039.1|1.2e-3361.36hypothetical protein Csa_1G569170 [Cucumis sativus][more]
gi|778662354|ref|XP_011659790.1|1.2e-3361.36PREDICTED: uncharacterized protein LOC105436280 isoform X1 [Cucumis sativus][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G26210.1CSPI01G26210.1mRNA