CSPI01G25100 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G25100
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionNADH-ubiquinone oxidoreductase
LocationChr1 : 20523897 .. 20529615 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACAAAATCATTTTCCATCCATCATGTATGAACAAATTGGTACCTCTTTATTTGGACCCTAAAAATAAAATAAATTAAAAAGAAAGGGGAAAACTCTTCAGTTCATCGGCAGCGTGTAAGTTAGCATTTCTTACCCTAACACTCCACTATCAAGTCTGCGTTTCTCTCAGATTCTCACTCTTAGTTTACGGGATTCGACCTAGTGGATTCAAAGGTTTGAAATTTTCTAATTCAGAAGCCTTTTTTTTTCTGGCACGTTGTGGATGCAAAATTTTGTTGCCGATGATACCAAGCTAAATTATCTGTGTTCTGTTGTTTTGAATTGATCGAATTAGAGATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGTAAGCGAATAACATTTTACTATTTTCTTTGGCTAAGTACGATTTCCCATTTCTCTGGAAAATTGCTTTAGTTATCATATGATCGTCTTCTGATCTGCTAGCAAATAGGGGGATGGGAAATACATTGCTTTAGTAATCATATGATAGGAAACACAGAACCAGGAAACTGGAAAGAAAATAAGTCGTATTTCTTAGGTTGTTACTCATTTATTGGTTAAGTGGAAAATCACCTCTCTTCCCCTTTTCAATGGTGGTTTGGAGATAGGGTCTCTTAAAAACAAAATTCTTGCTCTTCTCTCAAAATGGCTGTGGAGATTATCGATAGAGAGGAAGGCCCTTTGGAGAAAAGTGGTAAGCAGAATTTATGGTGAAGGGTTTCAAGGATGGAGAATCCTTAGCCTAAAGGTTGCTCCAAAAAGAACAGCCCATGGTTTGACACCTTTGTTTCGTAAGTTTGTTAAACTCAAAGCTGGAAGTGGGCAGGAGATTTTCTTTCAGTAGGATGTGTGGATTGGGGAATCCCTTCATGAAGATTTTCCATAAATTTATAGCTTCTCTTAGGAAAGAGGCAATAGTTGCAGATTGTTGAGTTTATATTAATGAAACATGGAATTGGGCATTTGGAGAGGCACCTTTGGTTGCCAGCTCCAAGCTTGGATTGCTTTGATTGGCAAATTGGATGCTTTTCGCTTGGGGTAAGGTGGACTTATTTGGTGCTTTCTCTTCAAGAACACTTCTTTTGAAGTTTGATGGAAATAGGTCGACGTTCAGGCATACTACAACTGATTCAATTTGAAAATTTAAAATTCTTAAGGTGAAGGTGTTTTCATGTTGCGTCTCACGTAAGCTTTGATACTCAAAATGTGATGCAAAAGAAATGTTATTTGACTGCTTTAAGCCTGTCATTGTGCGGGTAATCCTTAGATCATATTTTTCTGCACTGCTTAGTTGCTTGGCAATGCTGGATTTGCCTCTTCAAAGATTTTGGGATTGTCACCTGCATCCCTCACAGGATCATATTTTTCTGCACTGCTTAGTTGCTTGGCAATGCTGGATTTGCCTCTTCAAAGATTTTGGGATTGTCACCTGCATCCCTCACTCTGTGAATGAATGATTGTTTGAAGTTATAAATAGTTGGCCCTTGAAAGGAAAAGGCAATATTCTTTGGAAGTGTGTTGTTGGAGCCACTTATTGGGTTAACTTTTGAATTGAACATGAGTATCCCTACTCTTTCTACTTTTGGAATTGCCAAAGGCCTTTTTGTTCTCCTCTCTTTGAAAGGTGGAATCCCAAAGAAGTTTGAAGTTTTCGCCTAATATCTTTTGCATGAGAAAATCAACACTTTGGATCACATTCAGAGGTGTTCCCCTGTGTATTTGGTGTTGCTATGGTGTGTTTTGTGCATGGGAGATTCTAAGGATCTTGATAATTTATTTTGGAATTGCCAGTTCGTGCAATTGATCTAGGACCGGTTTTTGGATTACTTTGGGGTTTCTTGTGTTATAATAGAGATTGTTGGTTTATGTCTGAGGAGGTCATGTTGTTCCTTCCTTTTGAGGAAAAGGGGGAAGTTCTTTGGCAAGCTTGTTTTTGGTTTGAAAGAAATCCTAGGATTTTTAGGGGTAGATTGGTCTTGGGATGTTCTGTGGGATACTATGAGATGCAATACTTCTTTATTTATGGGTGGTGGTGTCACAGGGTGGAGGTTTTAGGGGTTTGACACGTGGCCTGTAAGGACTTTTGTAATTATTAGTTAGGTGTTACTCTTTTGAATTGGGAGCCCTTTTTTAGGTTTTTGGCCCTTTCATGTGACCTGTTTTTTGTATGCCCGGGTATATCCTTTTATGTTTCTTAGTAAAAGTTTAATTTCTTATTAAAAATTAAAATTAGAAAAAGGATAATTTTAATGGAGTCAGATATGGTTTATGATTTAAGATCAGTAGTATGGATTCTGGTCCAACTCTCATGGCCAATAATGAAGCCTCATGGAAATTCTACTGCTTTTTATTGGTGCAAGGATAAACACCCTTGTAATTATTTTAACTTGTCTTATTTATTCTCCAATTGGAAATATTTATTGTAATTGCATATTGGCTTTTGGGGTTTTCTGTTTTTCATTAATCAATGAAATGTTTCTTAACCCTCACGAAAGAGTCATACGAAGAAGCACTATGTTTTTTTATTCTGTACAGAAAGTATTCCTCATTCACTCAAAAACATTGCCTCCATTCCACTCTTCTCCAAATTGTATATTCTATAAATAATTTTTTTCCAAATATTTCTAGATGATTGTGTAATTGTTGTTTTAGTTTATGAGACTAATTCAAGGATACCAGCCGATAGAAGCCTTGTGGCCTAGTAACAGGTGGACTGAACAGAATAAACTAATTTGTAACTAACTAGCTTGTTTAGTGAAGATCATTTCATGGAACAGTGGGCTGTTTGCCCCTAGGATTAGAGAGGAGTAGCCCACTCCATGTTTGGCTCAAGTATTATCATAATTTTAGGATTAGGAGTTTCCTAATCCTAGTATTATGATAATACTCGTTCTCACTTTCCTTTCTCCTCTACCTATCTCACTTAGCTCCAAATATTTATCAAGTAAAAGTAGAAGTCTAAGCCAAAGCGGAAATCCCAGTAGCAGCCACCACAAAAGGAAGCAACATCGACAAAAGCTGAGATAATAGTTTGCACCCCAAATGCAGACTATTATAATCCTCAGACTATTATAATACCTAGACTATTATAAGTTACTTCTCACCCCAAACGCCCCCAACGATTATTTTTTTATTATTTAATCTTTAAATAATAGCACATGGGCACTCAAAGGATTTTTGAGAACAAATAACTTAGTTGGTTTGACCGTTTTGAACCGTTCAAGTTTAGCTGGATTGAAAACCTCAAATGGTGTTCCTTGTCAGAATTTATTGATGATTTATCTTTCTAGAATATTCGTTTGAATTGAGATGCTTTCATGTTCCAAATTTAGTTGATATTTCTCTCTTATCTTTTGTCCACTCCCTTTGGGATGTTTGTATAACTGAACATTTTTGTTTGTTTGTTTAATTTCCTTTGATCGGTAAAAGGTTTTGTATCTGTTTAAATGAAGAAAAAAATCATGGATATTAGTGAATGCTATTAGAAATATGTGGGGTTGGATGTCAATCATAAATGAACAATTTTTGGATGCAAAAGCTTTTGCTTGATTTTCTAAATGCTTGATCAATTATGATTACTGCACATCTGAATACTTTTTATGTTGAGACTTGTTGGTGATATATAATCAAATTTGTCTTCAACAACCAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAAAATGGTATTAGAGCAGGTGGTCTAGGGAGCTCCTGACTTCAAGCCCCTGCATTGTCGTTTCCTCCCCAATAAAATCGATTTCCACTTGTTGGGCCTTTCAAAAATATTTCAATCCCACAAGTGAGATAAAATTGATTCCACTAGTTAGACCATTCAAATATTTCAAGCCCATAAGTGAGGGAGGGTTGGTGATATATAATTAACTTTTCCTTCAACCACCACCTTAAGCTTTTGAGTGAATTGGTGGTTTAATAAGACTTTTTATTTGGATTTGTAATTATCTTGATTTTCCATTTTCTACCTTCTAACTTCTAAGAAATGAATCCTTCTGCAGTGTTGGGTATAGGGGTATTTCAGTGGTTGAATATGTGGCTGTGAAATGGTGAACCTAATATTAAACGGTTGATGAAGATAATTCTGACTCTGCGTTGTTTTCTTGTTTTCCTATGTTCTTCCTGGACAAACGGTACTGCAGCATCGATTATGGGCATTCTATTGGTTTTGATATCCATGAAGTAGTATTTCCACTATTTTTTTTTTCAATTGGAAAGTAAGAAATATGGCATTTCATTTTATAAATGAAGTTAAACAGGGGTGGAGTGCCAACCCCACAAAGGGGGCAGGTTGTACCAAATCCCTTCAATTAGCTGAAATTTCATAAAAGAGTAGTAGATGAATTTTGGAAGGTACACTACGAACTAGGGTTATTGGTATGATCATCCCTAACCCCTAAACTGATTAAGATGTTCAAAACATTCAATGATTTTTTTTCTCAGACATATTGAATTACAATTGCAAGTTATTTGTTTTTGCTTTCAAAGAGTACATTCTTTTTTCCGAATTACAAGTTATCTTTTCAACCATTAACATCATACTTTAGATTTTGTGACTGCTATAGAATAGTTATTGACAATGCTTGTTATAGTTAATGAAAAAAAGAAAAAGGAAGAATATCCATTTTTCTTTAGTTTGTTGATATAGTCTTTTTTTCACCAATCTTTTTGGCCTATTTCCTCTGGTTGGTTTGGATGTGTCAACTTTTAGCGCATGAGACTGCAGGCACTAGTCATTACCATTCTCTATTTTCTTGTCTTCTACAATTATTCCTTGTTTCACTTTTTTATAACCTTTTTAGCTGGATATTTTGTGAGAGACATCCTTTCATTTCATCTTTTGCATTCTCTCTCATCATACAATCACTTGCCATACCTCTCATCAGTTTCACTTCTGACAACTATACCTGTTTATACCTAATTTCTGCATCCGTTTGAGAGGTTTAATGCTCTTCCAGTCGAGTTTCGTAACTAGATCTTTTTGTAACTGTAGTCTTGATTTGATTCAATTAGATTAGAATCCGTTCTTTTTATGTATTTGTATGTTCTTTTATATTTTGTTCAACGACAGTTTGGCTTCTTAAAATGAAAAAGAAAATTAATTAATGGAAAGGCTGCTTTTGTTTGCAGGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGATCTTCTTCATTTATGTAAACTGTTTCCAATAAAATTTTCTTGTTTGCAAAATGAGCAAGTACTGTTGTTATTCCCTTTCCCTCTCTGAGTTAACCTTATTTTCTTTAAACAATGCGCTCCTTTGTGTATGTCTCGGATTGCGAACCCGATACATTGTTGCAAACAAAAGATAAACCAATCTTTTTGCCATCCCCTTCTCTGATTACTGTCATTAGTAATCTACCTTATTGCTTCTTAAAGTTTTCCTATTCAAAATATCTGGT

mRNA sequence

ATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGA

Coding sequence (CDS)

ATGGCGAGCGCTGTAGATGCTGCAGGAGATCCAATTCCTACATCGGCGGTGCTAATGTCCTCCTCAAAGCACATTGCGATCAAGTGTCGGTCGGAGAATGTGGCATACCTCCAGTGCAAACAGAAGGATCCCAACCCGGAGAAATGCCTGGACAAAGGCCATCAAGTCACTCGATGCGTCCTCTCCCTGCTTAAAGATCTTCATCAAAGGTGCACGAAAGAGATGGATGCGTATGTCGGGTGTATGTACTACCATACTAATGAGTTCGATTTATGTCGCAAAGAGCAGGAAGCATTTGAGAAAGGTTGTCCCTTGGAATGA
Homology
[Close]
BLAST of CSPI01G25100 vs. Swiss-Prot
Match: NDA8B_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis thaliana GN=At5g18800 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.0e-45
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI ++C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CSPI01G25100 vs. Swiss-Prot
Match: NDA8A_ARATH (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis thaliana GN=At3g06310 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 5.7e-44
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LLKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CSPI01G25100 vs. Swiss-Prot
Match: NDUA8_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Gorilla gorilla gorilla GN=NDUFA8 PE=2 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09
Identity = 27/94 (28.72%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H   +C   N  ++ C+ ++ +P +CL++G  V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYHTNE-FDLCRKEQEAFEKGCPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CSPI01G25100 vs. Swiss-Prot
Match: NDUA8_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Homo sapiens GN=NDUFA8 PE=1 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09
Identity = 27/94 (28.72%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H   +C   N  ++ C+ ++ +P +CL++G  V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYHTNE-FDLCRKEQEAFEKGCPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CSPI01G25100 vs. Swiss-Prot
Match: NDUA8_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan troglodytes GN=NDUFA8 PE=2 SV=3)

HSP 1 Score: 61.2 bits (147), Expect = 7.8e-09
Identity = 27/94 (28.72%), Postives = 52/94 (55.32%), Query Frame = 1 

Query: 14  TSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLSLLKDLHQRCTK 73
           +SAVL +++ H   +C   N  ++ C+ ++ +P +CL++G  V +C L   + + + C +
Sbjct: 21  SSAVLKAAAHHYGAQCDKPNKEFMLCRWEEKDPRRCLEEGKLVNKCALDFFRQIKRHCAE 80

Query: 74  EMDAYVGCMYYHTNE-FDLCRKEQEAFEKGCPLE 107
               Y  C+ Y   + F  CRK+Q  F++ C L+
Sbjct: 81  PFTEYWTCIDYTGQQLFRHCRKQQAKFDE-CVLD 113

[Close]
BLAST of CSPI01G25100 vs. TrEMBL
Match: A0A0A0LY30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538810 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 2.7e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CSPI01G25100 vs. TrEMBL
Match: A0A068TSA5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025909001 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.0e-47
Identity = 87/105 (82.86%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M + VDAAG+PIPTSAVLM++SKHIA +CR ENVA+L+CK+ DPNPEKCLDKGHQVTRCV
Sbjct: 1   MGNTVDAAGNPIPTSAVLMAASKHIATRCRDENVAFLKCKKDDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPL 106
           LSLLKDLHQRCTKEMDAY GCMYYHTNEF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYAGCMYYHTNEFELCRKEQKEFEKACPL 105

[Close]
BLAST of CSPI01G25100 vs. TrEMBL
Match: A0A059B5M4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03663 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.0e-47
Identity = 88/106 (83.02%), Postives = 98/106 (92.45%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MAS+VDA G+PIPTSAVLM+SSKHIA +CR ENVA+L+CKQKDPNPEKCL+KG +VTRCV
Sbjct: 1   MASSVDATGEPIPTSAVLMASSKHIATRCRPENVAFLKCKQKDPNPEKCLEKGREVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQRCTKEMD YVGCMYY+TNEFDLCRKEQ+ FEK CPLE
Sbjct: 61  LGLLKDLHQRCTKEMDDYVGCMYYYTNEFDLCRKEQQEFEKACPLE 106

[Close]
BLAST of CSPI01G25100 vs. TrEMBL
Match: M5XT71_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013741mg PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-46
Identity = 88/105 (83.81%), Postives = 99/105 (94.29%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVL ++SKHI  +C++ENVA+L+CK+KDPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLTAASKHIQFQCQAENVAFLKCKKKDPNPEKCLDKGRQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPL 106
           LSLLKDLHQRCTKEMDAYVGCMYY+TNEF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYNTNEFELCRKEQDEFEKKCPL 105

[Close]
BLAST of CSPI01G25100 vs. TrEMBL
Match: A0A059D101_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01248 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.9e-46
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MA+++DAAG PIPTSAVL +SSKHI   C SENVA+L+CKQKDPNPEKCL+KG QVTRCV
Sbjct: 5   MATSLDAAGGPIPTSAVLTASSKHIGASCLSENVAFLKCKQKDPNPEKCLEKGQQVTRCV 64

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPL 106
           L LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQ+AFEK CPL
Sbjct: 65  LHLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPL 109

[Close]
BLAST of CSPI01G25100 vs. TAIR10
Match: AT5G18800.1 (AT5G18800.1 Cox19-like CHCH family protein)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-46
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M+SAVDA G+PIPTSAVL +S+KHI ++C  ENVA+L+CK+ DPNPEKCLDKG  VTRCV
Sbjct: 1   MSSAVDATGNPIPTSAVLTASAKHIGMRCMPENVAFLKCKKNDPNPEKCLDKGRDVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQ+C KEMD YVGCMYY+TNEFDLCRKEQEAFEK CPL+
Sbjct: 61  LGLLKDLHQKCQKEMDDYVGCMYYYTNEFDLCRKEQEAFEKVCPLK 106

[Close]
BLAST of CSPI01G25100 vs. TAIR10
Match: AT3G06310.1 (AT3G06310.1 Cox19-like CHCH family protein)

HSP 1 Score: 177.9 bits (450), Expect = 3.2e-45
Identity = 79/104 (75.96%), Postives = 92/104 (88.46%), Query Frame = 1 

Query: 3   SAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCVLS 62
           +AVD  G+PIPTSAVL +S+KHI I+C  EN+A+L+CK+ DPNPEKCL+KG  VTRCVL 
Sbjct: 5   AAVDGTGNPIPTSAVLTASAKHIGIRCMPENMAFLKCKKNDPNPEKCLEKGRDVTRCVLG 64

Query: 63  LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LLKDLHQRC KEMDAYVGCMYY+TNEF+LCRKEQEAFEK CPL+
Sbjct: 65  LLKDLHQRCPKEMDAYVGCMYYYTNEFELCRKEQEAFEKVCPLK 108

[Close]
BLAST of CSPI01G25100 vs. NCBI nr
Match: gi|449435544|ref|XP_004135555.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 225.7 bits (574), Expect = 3.8e-56
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV
Sbjct: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE
Sbjct: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 106

[Close]
BLAST of CSPI01G25100 vs. NCBI nr
Match: gi|802578268|ref|XP_012069439.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 198.4 bits (503), Expect = 6.5e-48
Identity = 90/106 (84.91%), Postives = 98/106 (92.45%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MASAVDA G+PIPTSAVLM+SS+HI  +C  ENVA+L+CK+KDPNPEKCLDKG QVTRCV
Sbjct: 1   MASAVDATGNPIPTSAVLMASSRHIGTRCYEENVAFLKCKKKDPNPEKCLDKGQQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQ+AFEK CPLE
Sbjct: 61  LGLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKACPLE 106

[Close]
BLAST of CSPI01G25100 vs. NCBI nr
Match: gi|702445322|ref|XP_010024485.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 194.9 bits (494), Expect = 7.2e-47
Identity = 88/106 (83.02%), Postives = 98/106 (92.45%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MAS+VDA G+PIPTSAVLM+SSKHIA +CR ENVA+L+CKQKDPNPEKCL+KG +VTRCV
Sbjct: 1   MASSVDATGEPIPTSAVLMASSKHIATRCRPENVAFLKCKQKDPNPEKCLEKGREVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LLKDLHQRCTKEMD YVGCMYY+TNEFDLCRKEQ+ FEK CPLE
Sbjct: 61  LGLLKDLHQRCTKEMDDYVGCMYYYTNEFDLCRKEQQEFEKACPLE 106

[Close]
BLAST of CSPI01G25100 vs. NCBI nr
Match: gi|1009141706|ref|XP_015888336.1| (PREDICTED: NADH dehydrogenase [ubiquinone])

HSP 1 Score: 194.9 bits (494), Expect = 7.2e-47
Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           MA  VDAAGDPIPTSAVLM+SSKHIA KC++ENV +++CK+KDPNPEKCL+KG QVTRCV
Sbjct: 1   MAGTVDAAGDPIPTSAVLMASSKHIAFKCQAENVEFIKCKKKDPNPEKCLEKGKQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPLE 107
           L LL+DLHQRCTKEMDAYVGCMYY+TNEFDLCRKEQ+AFEK CPL+
Sbjct: 61  LGLLRDLHQRCTKEMDAYVGCMYYNTNEFDLCRKEQQAFEKACPLD 106

[Close]
BLAST of CSPI01G25100 vs. NCBI nr
Match: gi|661897225|emb|CDO98937.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 194.9 bits (494), Expect = 7.2e-47
Identity = 87/105 (82.86%), Postives = 97/105 (92.38%), Query Frame = 1 

Query: 1   MASAVDAAGDPIPTSAVLMSSSKHIAIKCRSENVAYLQCKQKDPNPEKCLDKGHQVTRCV 60
           M + VDAAG+PIPTSAVLM++SKHIA +CR ENVA+L+CK+ DPNPEKCLDKGHQVTRCV
Sbjct: 1   MGNTVDAAGNPIPTSAVLMAASKHIATRCRDENVAFLKCKKDDPNPEKCLDKGHQVTRCV 60

Query: 61  LSLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQEAFEKGCPL 106
           LSLLKDLHQRCTKEMDAY GCMYYHTNEF+LCRKEQ+ FEK CPL
Sbjct: 61  LSLLKDLHQRCTKEMDAYAGCMYYHTNEFELCRKEQKEFEKACPL 105

The following BLAST results are available for this feature:
BLAST of CSPI01G25100 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDA8B_ARATH3.0e-4577.36NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B OS=Arabidopsis th... [more]
NDA8A_ARATH5.7e-4475.96NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-A OS=Arabidopsis th... [more]
NDUA8_GORGO7.8e-0928.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Gorilla gorilla ... [more]
NDUA8_HUMAN7.8e-0928.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Homo sapiens GN=... [more]
NDUA8_PANTR7.8e-0928.72NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 OS=Pan troglodytes ... [more]
BLAST of CSPI01G25100 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LY30_CUCSA2.7e-56100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G538810 PE=4 SV=1[more]
A0A068TSA5_COFCA5.0e-4782.86Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00025909001 PE=4 SV=1[more]
A0A059B5M4_EUCGR5.0e-4783.02Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03663 PE=4 SV=1[more]
M5XT71_PRUPE1.5e-4683.81Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013741mg PE=4 SV=1[more]
A0A059D101_EUCGR1.9e-4683.81Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01248 PE=4 SV=1[more]
BLAST of CSPI01G25100 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G18800.11.7e-4677.36 Cox19-like CHCH family protein[more]
AT3G06310.13.2e-4575.96 Cox19-like CHCH family protein[more]
BLAST of CSPI01G25100 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435544|ref|XP_004135555.1|3.8e-56100.00PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|802578268|ref|XP_012069439.1|6.5e-4884.91PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|702445322|ref|XP_010024485.1|7.2e-4783.02PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|1009141706|ref|XP_015888336.1|7.2e-4782.08PREDICTED: NADH dehydrogenase [ubiquinone][more]
gi|661897225|emb|CDO98937.1|7.2e-4782.86unnamed protein product [Coffea canephora][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010625CHCH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G25100.1CSPI01G25100.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010625CHCHPFAMPF06747CHCHcoord: 71..104
score: 1.6
NoneNo IPR availablePANTHERPTHR13344NADH-UBIQUINONE OXIDOREDUCTASEcoord: 1..104
score: 7.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G25100Cla019532Watermelon (97103) v1cpiwmB017
CSPI01G25100Csa1G538810Cucumber (Chinese Long) v2cpicuB001
CSPI01G25100MELO3C002799Melon (DHL92) v3.5.1cpimeB014
CSPI01G25100ClCG03G006350Watermelon (Charleston Gray)cpiwcgB044
CSPI01G25100MELO3C035505.2Melon (DHL92) v3.6.1cpimedB015
CSPI01G25100CsaV3_1G037430Cucumber (Chinese Long) v3cpicucB000
CSPI01G25100Cla97C03G057620Watermelon (97103) v2cpiwmbB038
CSPI01G25100Bhi08G000994Wax gourdcpiwgoB064
CSPI01G25100Cucsa.167190Cucumber (Gy14) v1cgycpiB262
CSPI01G25100CsGy1G024520Cucumber (Gy14) v2cgybcpiB002
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G25100Watermelon (97103) v2cpiwmbB039
CSPI01G25100Cucurbita maxima (Rimu)cmacpiB210
CSPI01G25100Cucurbita maxima (Rimu)cmacpiB221
CSPI01G25100Cucurbita maxima (Rimu)cmacpiB396
CSPI01G25100Cucurbita maxima (Rimu)cmacpiB406
CSPI01G25100Cucurbita moschata (Rifu)cmocpiB198
CSPI01G25100Cucurbita moschata (Rifu)cmocpiB207
CSPI01G25100Cucurbita moschata (Rifu)cmocpiB384
CSPI01G25100Cucurbita moschata (Rifu)cmocpiB392
CSPI01G25100Watermelon (Charleston Gray)cpiwcgB045
CSPI01G25100Watermelon (97103) v1cpiwmB016
CSPI01G25100Cucurbita pepo (Zucchini)cpecpiB021
CSPI01G25100Cucurbita pepo (Zucchini)cpecpiB026
CSPI01G25100Cucurbita pepo (Zucchini)cpecpiB508
CSPI01G25100Cucurbita pepo (Zucchini)cpecpiB521
CSPI01G25100Bottle gourd (USVL1VR-Ls)cpilsiB036
CSPI01G25100Bottle gourd (USVL1VR-Ls)cpilsiB022
CSPI01G25100Melon (DHL92) v3.6.1cpimedB027
CSPI01G25100Silver-seed gourdcarcpiB0430
CSPI01G25100Silver-seed gourdcarcpiB0458
CSPI01G25100Silver-seed gourdcarcpiB0460