CSPI01G24520 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G24520
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 19823281 .. 19823553 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTTAAGGCTCATATATCCCATCGCACAGGAAATGGCCAACAACAACAACACCACCACCCTAACTCCTTCCTCCCAACCATCCACACCGCTAACCCGATTTTCAGCGATTGCGCCGCCGCGCTTCAGCTGCGCTTCGAGACCCCATATTCAAATTACTCTGTACACCATTTATGAAGAAGAAACTGAGGTCAAAATTTGCCAGGCTCCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGCTTTCGTCCACTTCGATCAGTGAAATGTTCT

mRNA sequence

ATGAGTTTAAGGCTCATATATCCCATCGCACAGGAAATGGCCAACAACAACAACACCACCACCCTAACTCCTTCCTCCCAACCATCCACACCGCTAACCCGATTTTCAGCGATTGCGCCGCCGCGCTTCAGCTGCGCTTCGAGACCCCATATTCAAATTACTCTGTACACCATTTATGAAGAAGAAACTGAGGTCAAAATTTGCCAGGCTCCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGCTTTCGTCCACTTCGATCAGTGAAATGTTCT

Coding sequence (CDS)

ATGAGTTTAAGGCTCATATATCCCATCGCACAGGAAATGGCCAACAACAACAACACCACCACCCTAACTCCTTCCTCCCAACCATCCACACCGCTAACCCGATTTTCAGCGATTGCGCCGCCGCGCTTCAGCTGCGCTTCGAGACCCCATATTCAAATTACTCTGTACACCATTTATGAAGAAGAAACTGAGGTCAAAATTTGCCAGGCTCCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGCTTTCGTCCACTTCGATCAGTGAAATGTTCT
Homology
[Close]
BLAST of CSPI01G24520 vs. TrEMBL
Match: A0A0A0M102_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534770 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.2e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 16 NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF 75
          NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF
Sbjct: 3  NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF 62

Query: 76 SSALSCFRPLRSVKCS 92
          SSALSCFRPLRSVKCS
Sbjct: 63 SSALSCFRPLRSVKCS 78

[Close]
BLAST of CSPI01G24520 vs. NCBI nr
Match: gi|700210775|gb|KGN65871.1| (hypothetical protein Csa_1G534770 [Cucumis sativus])

HSP 1 Score: 152.1 bits (383), Expect = 4.6e-34
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 

Query: 16 NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF 75
          NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF
Sbjct: 3  NNNTTTLTPSSQPSTPLTRFSAIAPPRFSCASRPHIQITLYTIYEEETEVKICQAPSSSF 62

Query: 76 SSALSCFRPLRSVKCS 92
          SSALSCFRPLRSVKCS
Sbjct: 63 SSALSCFRPLRSVKCS 78

The following BLAST results are available for this feature:
BLAST of CSPI01G24520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G24520 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M102_CUCSA3.2e-34100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534770 PE=4 SV=1[more]
BLAST of CSPI01G24520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G24520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700210775|gb|KGN65871.1|4.6e-34100.00hypothetical protein Csa_1G534770 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G24520.1CSPI01G24520.1mRNA