CSPI01G23470 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G23470
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Copper transporter, putative
Location	Chr1 : 19033540 .. 19034625 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATTAAAAAAAAGAAAGAGTAGGTGTCAAATGGTGAGAGGTGAACACACATGAAAAATGATAAACCGGCGGTGCACCAAATCAGGCGTTTAGTCATAGAAGTCACAATGAGTGTACGAACAAATCCATTTAATACTGAAACAGACGGCGTTCTTATCACTTATCACAAACCAATCGCCCTTCCCAATACCACACACGAGAATTTCCCGGCACCGGAGCCACCATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGGTAAATCCTCTGATCTTCCTCCTCTTAGTTGTTGATGAAGGGATAATAATGTGGAAATCTGGAATTGAAATTGAATGTTATGATAGTGTATTGAATGTTGGTGATGAATTTTTCTTGGATTGGATTAGAAACGAAATTTGTTGTTGGAATTCTTTGCAGCTTATGTCAAGTTGTAAACGGAAGAGGGGAAATGGTAAATTGGAAATGCTTTGGATTCAGATTTCAGGGATAATTCATCTTGTAATTTTTCTATCTCACTGTTCATCGTTTTCATTTAGGATTTTAATTTTGTAATTGTAAGCAAGAACTATGAAGATATTTAGTGGTGTTTAGGATTCATAGTCGCTATCTAAACTTAGAATTCATGAGTGTTCATTCATATTGTGAAATTTTTCAATGATAATGTTAAATTTTTCTA

mRNA sequence

ATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGCTTATGTCAAGTTGTAA

Coding sequence (CDS)

ATGGACGCTGCCACCGAAGCTCACAACCATCATATGCACGGCATGACACCGCCACCGGACTCCTCCACCGCATCGCCGGAAATGATGCACCACAAGATGATGATGCACATGACCTTCTTTTGGGGAACCAACGCCGAGATTCTGTTCCATCGCTGGCCTGGCGAGCGCTCCGGCATGTACGCCTTAGCCTTAATCTTCATCTTCGTGCTTGCTTTTCTCGTCGAATGGCTTACACATTGCCGATTGATTAAGGAAGATTCGAGCCGGGCAGCGGCAGGATTGATCCGGACTCTGATGCATACGGTTAGGGTTGGATTAGCGTATTTAGTGATGCTTGCGGTGATGTCGTTCAATGTTGGAGTGCTTTTGGTAGCAATCGGTGGACATTGCTTGGGATTTTTCTTGTTTGGGAGTAAATTTTTCAAGAGATCGGAAGCGGTTTCTGCTTATGTCAAGTTGTAA

Homology

[Close]

BLAST of CSPI01G23470 vs. Swiss-Prot
Match: COPT1_ARATH (Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2)

HSP 1 Score: 168.7 bits (426), Expect = 5.2e-41
Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 1


Query: 11  HMHGMTPPPDSSTASPEMM-------------HHKMMMHMTFFWGTNAEILFHRWPGERS 70
           HMHGM  P  SS++SP  M             H KMMMHMTFFWG N E+LF  WPG  S
Sbjct: 5   HMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGTSS 64

Query: 71  GMYALALIFIFVLAFLVEWLTHCRLIK---EDSSRAAAGLIRTLMHTVRVGLAYLVMLAV 130
           GMYAL LIF+F LA L EWL H  L++    DS+  AAGLI+T ++T+R+GLAYLVMLAV
Sbjct: 65  GMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAV 124

Query: 131 MSFNVGVLLVAIGGHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
           MSFN GV LVA+ GH +GF LFGS+ F R+ +   K++ +PP  C
Sbjct: 125 MSFNAGVFLVALAGHAVGFMLFGSQTF-RNTSDDRKTNYVPPSGC 168

[Close]

BLAST of CSPI01G23470 vs. Swiss-Prot
Match: COPT2_ARATH (Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 83/150 (55.33%), Postives = 102/150 (68.00%), Query Frame = 1


Query: 11  HMHGMTPP-PDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFV 70
           HMH M PP P SS+ S     H MMMHMTFFWG N E+LF  WPG  SGMYAL LI IF+
Sbjct: 5   HMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFL 64

Query: 71  LAFLVEWLTHCRLIK-EDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGG 130
           LA + EWL H  +++   S+  AAGL +T ++T++ GL+YLVMLAVMSFN GV +VAI G
Sbjct: 65  LAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

Query: 131 HCLGFFLFGSKFFKRSEAVSGKSSDLPPLS 159
           + +GFFLFGS  FK+       +  LPP S
Sbjct: 125 YGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of CSPI01G23470 vs. Swiss-Prot
Match: COPT6_ARATH (Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.1e-30
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1


Query: 13  HGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAF 72
           HG  PP   S+       + +MMHMTFFWG N EILF  WPG   GMY L LI +F+LA 
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  LVEWLTHCRLIK-EDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCL 132
           +VEWL H  +++   S+  A GL++T ++T++ GLAYLVMLAVMSFN GV +VAI G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFFLFGSKFFK 143
           GF LFGS  FK
Sbjct: 123 GFMLFGSTAFK 133

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BLAST of CSPI01G23470 vs. Swiss-Prot
Match: COPT1_ORYSJ (Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 6.6e-28
Identity = 72/134 (53.73%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 10  HHMHGMTPPPDSSTASPEMMHHKMMM--HMTFFWGTNAEILFHRWPGERSGMYALALIFI 69
           H M GM+PP   + A   M   K M   HMTFFWG N+E+LF  WPG R GMYALALIF+
Sbjct: 6   HDMGGMSPPAAGAAAQGGMGAMKSMRYTHMTFFWGKNSEVLFTMWPGTRGGMYALALIFV 65

Query: 70  FVLAFLVEWL-----THCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVL 129
           F LA +VE+L       C       + AA GL R  +HTVRVG+AYL+MLA+MSFN GV 
Sbjct: 66  FALAVIVEFLGSRRADACLAALARRAPAAGGLARAAVHTVRVGVAYLLMLALMSFNGGVF 125

Query: 130 LVAIGGHCLGFFLF 137
           LVA+ GH  GF  F
Sbjct: 126 LVAVAGHAAGFLAF 139

[Close]

BLAST of CSPI01G23470 vs. Swiss-Prot
Match: COPT4_ARATH (Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 2.1e-26
Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 1


Query: 21  SSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAFLVEWLTHC 80
           ++T   +  H   ++H TF+WG N ++LF  WPG   GMYALALIF+F LAFL EWL  C
Sbjct: 16  TTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARC 75

Query: 81  ---RLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCLGFFLFG 140
                IK+ + + A    RT M+TV+ G +YLV+LAV+SFN GV L AI GH LGF +F 
Sbjct: 76  SDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFR 135

Query: 141 SKFFKRSE 146
            + F+  +
Sbjct: 136 GRAFRNRD 143

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BLAST of CSPI01G23470 vs. TrEMBL
Match: A0A0A0LVF3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-78
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60
           MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 149
           VLLVAIGGHCLGFFLFGSKFFKRSEAVS
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of CSPI01G23470 vs. TrEMBL
Match: M5W0K7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012818mg PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 8.9e-48
Identity = 93/149 (62.42%), Postives = 112/149 (75.17%), Query Frame = 1


Query: 11  HMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVL 70
           HM  M  P    + S  MMHHKMMMHMTFFWGTNAE+LF +WPG  +GMY + L+F+F L
Sbjct: 5   HMGVMASPSSMMSGSNGMMHHKMMMHMTFFWGTNAEVLFSKWPGSSTGMYYVCLLFVFAL 64

Query: 71  AFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHC 130
           A +VEWL+HCRLIK  SS    GL +T +HT+RVGLAY+VMLAVMSFNVGV LVA+ GH 
Sbjct: 65  AVIVEWLSHCRLIKAGSSDVVCGLAQTFLHTIRVGLAYMVMLAVMSFNVGVFLVAVAGHT 124

Query: 131 LGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
           +GF LFGS+ FK+ +    K SDLPP+SC
Sbjct: 125 VGFLLFGSRVFKKPDPEDEKDSDLPPMSC 153

[Close]

BLAST of CSPI01G23470 vs. TrEMBL
Match: A0A061GWU0_THECC (Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.9e-46
Identity = 100/156 (64.10%), Postives = 117/156 (75.00%), Query Frame = 1


Query: 6   EAHNH-HMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALAL 65
           E  NH HM+GM    D S A   M HH MMMHMTFFWG NAEILF  WPG R+GMY LAL
Sbjct: 2   ENMNHDHMNGMN---DESAAGGTMHHHMMMMHMTFFWGKNAEILFSGWPGTRTGMYVLAL 61

Query: 66  IFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLV 125
           I +FVL F+VEW++H +LIK  S+  AAG+++TL+H +RVGLAYLVMLAVMSFN GV L 
Sbjct: 62  IVVFVLGFMVEWISHSQLIKPGSTHVAAGVVQTLLHALRVGLAYLVMLAVMSFNGGVFLA 121

Query: 126 AIGGHCLGFFLFGSKFFKRSEA-VSGKSSDLPPLSC 160
           A+ GH LGF LFGS+ FK+S A   GK+SDLPP SC
Sbjct: 122 AVAGHTLGFLLFGSRVFKKSSAPAPGKTSDLPPTSC 154

[Close]

BLAST of CSPI01G23470 vs. TrEMBL
Match: V4UFV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 4.9e-46
Identity = 95/153 (62.09%), Postives = 118/153 (77.12%), Query Frame = 1


Query: 10  HHMHGMTPPP---DSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIF 69
           HH HG   PP   +++  +  MMHH  MMHMTFFWG N+EILF  WPG  SGMYALALI 
Sbjct: 5   HHDHGSMSPPMSMNNTNNTGTMMHHHNMMHMTFFWGKNSEILFSGWPGTSSGMYALALIV 64

Query: 70  IFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAI 129
           +FVLA LVEWL+HC+L+K D++  AAGLI+TL+H +RVGLA+LVMLA+MSFN GV LVA+
Sbjct: 65  VFVLAVLVEWLSHCKLMKPDANHVAAGLIQTLLHAIRVGLAFLVMLAIMSFNGGVFLVAV 124

Query: 130 GGHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
            GH  GFF+FGS+ F +S +   K+SDLPP+SC
Sbjct: 125 AGHTFGFFIFGSRVFNKS-SPPPKTSDLPPMSC 156

[Close]

BLAST of CSPI01G23470 vs. TrEMBL
Match: B9HPB1_POPTR (Copper transporter family protein OS=Populus trichocarpa GN=POPTR_0009s04360g PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 4.1e-45
Identity = 94/151 (62.25%), Postives = 114/151 (75.50%), Query Frame = 1


Query: 9   NHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIF 68
           +HH+ GM+PPP +     + M HKMM HMTFFWG +  ILF  WPG  +GMY LAL+FIF
Sbjct: 4   DHHLPGMSPPPSTPMNGTDGMDHKMMTHMTFFWGKDTLILFSGWPGTSTGMYVLALVFIF 63

Query: 69  VLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGG 128
           VLA LVEWL+HCRL+K  S+  AAGLI+ LMH VRVGLAY+VMLAVMSFN GV +VA+ G
Sbjct: 64  VLAVLVEWLSHCRLVKPGSNNVAAGLIQALMHAVRVGLAYMVMLAVMSFNGGVFIVAVAG 123

Query: 129 HCLGFFLFGSKFFKRSEAVS-GKSSDLPPLS 159
           H +GFF+FGS+ FK +E     K+SDLPP S
Sbjct: 124 HLVGFFIFGSRVFKDTEMPPYHKTSDLPPTS 154

[Close]

BLAST of CSPI01G23470 vs. TAIR10
Match: AT5G59030.1 (AT5G59030.1 copper transporter 1)

HSP 1 Score: 168.7 bits (426), Expect = 2.9e-42
Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 1


Query: 11  HMHGMTPPPDSSTASPEMM-------------HHKMMMHMTFFWGTNAEILFHRWPGERS 70
           HMHGM  P  SS++SP  M             H KMMMHMTFFWG N E+LF  WPG  S
Sbjct: 5   HMHGMPRPSSSSSSSPSSMMNNGSMNEGGGHHHMKMMMHMTFFWGKNTEVLFSGWPGTSS 64

Query: 71  GMYALALIFIFVLAFLVEWLTHCRLIK---EDSSRAAAGLIRTLMHTVRVGLAYLVMLAV 130
           GMYAL LIF+F LA L EWL H  L++    DS+  AAGLI+T ++T+R+GLAYLVMLAV
Sbjct: 65  GMYALCLIFVFFLAVLTEWLAHSSLLRGSTGDSANRAAGLIQTAVYTLRIGLAYLVMLAV 124

Query: 131 MSFNVGVLLVAIGGHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
           MSFN GV LVA+ GH +GF LFGS+ F R+ +   K++ +PP  C
Sbjct: 125 MSFNAGVFLVALAGHAVGFMLFGSQTF-RNTSDDRKTNYVPPSGC 168

[Close]

BLAST of CSPI01G23470 vs. TAIR10
Match: AT3G46900.1 (AT3G46900.1 copper transporter 2)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38
Identity = 83/150 (55.33%), Postives = 102/150 (68.00%), Query Frame = 1


Query: 11  HMHGMTPP-PDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFV 70
           HMH M PP P SS+ S     H MMMHMTFFWG N E+LF  WPG  SGMYAL LI IF+
Sbjct: 5   HMHDMPPPSPSSSSMSNHTTPHMMMMHMTFFWGKNTEVLFSGWPGTSSGMYALCLIVIFL 64

Query: 71  LAFLVEWLTHCRLIK-EDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGG 130
           LA + EWL H  +++   S+  AAGL +T ++T++ GL+YLVMLAVMSFN GV +VAI G
Sbjct: 65  LAVIAEWLAHSPILRVSGSTNRAAGLAQTAVYTLKTGLSYLVMLAVMSFNAGVFIVAIAG 124

Query: 131 HCLGFFLFGSKFFKRSEAVSGKSSDLPPLS 159
           + +GFFLFGS  FK+       +  LPP S
Sbjct: 125 YGVGFFLFGSTTFKKPSDDQKTAELLPPSS 154

[Close]

BLAST of CSPI01G23470 vs. TAIR10
Match: AT2G26975.1 (AT2G26975.1 Ctr copper transporter family)

HSP 1 Score: 134.4 bits (337), Expect = 6.1e-32
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1


Query: 13  HGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAF 72
           HG  PP   S+       + +MMHMTFFWG N EILF  WPG   GMY L LI +F+LA 
Sbjct: 3   HGNMPPSSPSSMVNHTNSNMIMMHMTFFWGKNTEILFSGWPGTSLGMYVLCLIVVFLLAV 62

Query: 73  LVEWLTHCRLIK-EDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCL 132
           +VEWL H  +++   S+  A GL++T ++T++ GLAYLVMLAVMSFN GV +VAI G  +
Sbjct: 63  IVEWLAHSSILRGRGSTSRAKGLVQTAVYTLKTGLAYLVMLAVMSFNGGVFIVAIAGFAV 122

Query: 133 GFFLFGSKFFK 143
           GF LFGS  FK
Sbjct: 123 GFMLFGSTAFK 133

[Close]

BLAST of CSPI01G23470 vs. TAIR10
Match: AT2G37925.1 (AT2G37925.1 copper transporter 4)

HSP 1 Score: 120.2 bits (300), Expect = 1.2e-27
Identity = 61/128 (47.66%), Postives = 82/128 (64.06%), Query Frame = 1


Query: 21  SSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVLAFLVEWLTHC 80
           ++T   +  H   ++H TF+WG N ++LF  WPG   GMYALALIF+F LAFL EWL  C
Sbjct: 16  TTTTQTQTPHRPSLLHPTFYWGYNCQVLFSGWPGSDRGMYALALIFVFFLAFLAEWLARC 75

Query: 81  ---RLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHCLGFFLFG 140
                IK+ + + A    RT M+TV+ G +YLV+LAV+SFN GV L AI GH LGF +F 
Sbjct: 76  SDASSIKQGADKLAKVAFRTAMYTVKSGFSYLVILAVVSFNGGVFLAAIFGHALGFAVFR 135

Query: 141 SKFFKRSE 146
            + F+  +
Sbjct: 136 GRAFRNRD 143

[Close]

BLAST of CSPI01G23470 vs. TAIR10
Match: AT5G59040.1 (AT5G59040.1 copper transporter 3)

HSP 1 Score: 111.7 bits (278), Expect = 4.2e-25
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 1


Query: 12  MHGMT------PPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALI 71
           M+GM+      P P  S+       H  MMHMTFFWG   E+LF  WPG    MY + L 
Sbjct: 1   MNGMSGSSPAAPAPSPSSFFQHRHRHGGMMHMTFFWGKTTEVLFDGWPGTSLKMYWVCLA 60

Query: 72  FIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVA 131
            IFV++   E L+ C  +K   +    GL++T ++TVR  L+YLVMLAVMSFN GV + A
Sbjct: 61  VIFVISAFSECLSRCGFMKSGPASLGGGLLQTAVYTVRAALSYLVMLAVMSFNGGVFVAA 120

Query: 132 IGGHCLGFFLFGSKFFKRSEAVS 149
           + G  LGF +FGS+ F+ + + S
Sbjct: 121 MAGFGLGFMIFGSRAFRATSSNS 143

[Close]

BLAST of CSPI01G23470 vs. NCBI nr
Match: gi|449455068|ref|XP_004145275.1| (PREDICTED: copper transporter 1-like [Cucumis sativus])

HSP 1 Score: 298.5 bits (763), Expect = 6.9e-78
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60
           MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY
Sbjct: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 149
           VLLVAIGGHCLGFFLFGSKFFKRSEAVS
Sbjct: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 148

[Close]

BLAST of CSPI01G23470 vs. NCBI nr
Match: gi|659115179|ref|XP_008457427.1| (PREDICTED: copper transporter 1 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 8.5e-76
Identity = 144/148 (97.30%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 1   MDAATEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60
           MDAA EAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY
Sbjct: 1   MDAAAEAHNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMY 60

Query: 61  ALALIFIFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120
           ALALI IFVLAFLVEWLTHCRLIKEDSS+AAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG
Sbjct: 61  ALALILIFVLAFLVEWLTHCRLIKEDSSQAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVG 120

Query: 121 VLLVAIGGHCLGFFLFGSKFFKRSEAVS 149
           VLLVAIGGHCLGFFLFGS+FFKRSEAVS
Sbjct: 121 VLLVAIGGHCLGFFLFGSRFFKRSEAVS 148

[Close]

BLAST of CSPI01G23470 vs. NCBI nr
Match: gi|645216538|ref|XP_008221659.1| (PREDICTED: copper transporter 6 [Prunus mume])

HSP 1 Score: 199.5 bits (506), Expect = 4.4e-48
Identity = 94/153 (61.44%), Postives = 115/153 (75.16%), Query Frame = 1


Query: 11  HMHGMTPPPDSSTA----SPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIF 70
           HM GM  PP   ++    S  MMHHKMMMHMTFFWGTNAE+LF +WPG  +GMY + L+F
Sbjct: 5   HMEGMASPPSPPSSMMNGSNGMMHHKMMMHMTFFWGTNAEVLFSKWPGSSTGMYYVCLLF 64

Query: 71  IFVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAI 130
           +F LA +VEWL+HCRLIK  SS    GL +T +HT+RVGLAY+VMLAVMSFN+GV LVA+
Sbjct: 65  VFALAVIVEWLSHCRLIKAGSSDVVCGLAQTFLHTIRVGLAYMVMLAVMSFNIGVFLVAV 124

Query: 131 GGHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
            GH +GF LFGS+ FK+ +    K SDLPP+SC
Sbjct: 125 AGHTVGFLLFGSRVFKKPDPEDEKGSDLPPMSC 157

[Close]

BLAST of CSPI01G23470 vs. NCBI nr
Match: gi|657952085|ref|XP_008355761.1| (PREDICTED: copper transporter 6-like [Malus domestica])

HSP 1 Score: 199.1 bits (505), Expect = 5.7e-48
Identity = 93/152 (61.18%), Postives = 112/152 (73.68%), Query Frame = 1


Query: 8   HNHHMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFI 67
           H H M GM PPP SS  +   MHH MMMHMTFFWGT AE+LF +WPG  +GMY ++L F+
Sbjct: 6   HGHGMGGMAPPPPSSMTNGTTMHHTMMMHMTFFWGTKAEVLFSKWPGTNTGMYYVSLFFV 65

Query: 68  FVLAFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIG 127
           F LA LVEWL+HCRLI+  +S   +GL +T +H +RVGLAYLVMLAVMSFN GV LVA+ 
Sbjct: 66  FALAVLVEWLSHCRLIRPSASDVISGLAQTFLHAIRVGLAYLVMLAVMSFNAGVFLVAVA 125

Query: 128 GHCLGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
           GH +GF LFGS+ FK+   V  K SDLPP+ C
Sbjct: 126 GHTVGFLLFGSRVFKKKPDVDEKGSDLPPMRC 157

[Close]

BLAST of CSPI01G23470 vs. NCBI nr
Match: gi|595830448|ref|XP_007206073.1| (hypothetical protein PRUPE_ppa012818mg [Prunus persica])

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-47
Identity = 93/149 (62.42%), Postives = 112/149 (75.17%), Query Frame = 1


Query: 11  HMHGMTPPPDSSTASPEMMHHKMMMHMTFFWGTNAEILFHRWPGERSGMYALALIFIFVL 70
           HM  M  P    + S  MMHHKMMMHMTFFWGTNAE+LF +WPG  +GMY + L+F+F L
Sbjct: 5   HMGVMASPSSMMSGSNGMMHHKMMMHMTFFWGTNAEVLFSKWPGSSTGMYYVCLLFVFAL 64

Query: 71  AFLVEWLTHCRLIKEDSSRAAAGLIRTLMHTVRVGLAYLVMLAVMSFNVGVLLVAIGGHC 130
           A +VEWL+HCRLIK  SS    GL +T +HT+RVGLAY+VMLAVMSFNVGV LVA+ GH 
Sbjct: 65  AVIVEWLSHCRLIKAGSSDVVCGLAQTFLHTIRVGLAYMVMLAVMSFNVGVFLVAVAGHT 124

Query: 131 LGFFLFGSKFFKRSEAVSGKSSDLPPLSC 160
           +GF LFGS+ FK+ +    K SDLPP+SC
Sbjct: 125 VGFLLFGSRVFKKPDPEDEKDSDLPPMSC 153

The following BLAST results are available for this feature:

BLAST of CSPI01G23470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COPT1_ARATH	5.2e-41	55.15	Copper transporter 1 OS=Arabidopsis thaliana GN=COPT1 PE=2 SV=2	[more]
COPT2_ARATH	2.0e-37	55.33	Copper transporter 2 OS=Arabidopsis thaliana GN=COPT2 PE=2 SV=1	[more]
COPT6_ARATH	1.1e-30	53.44	Copper transporter 6 OS=Arabidopsis thaliana GN=COPT6 PE=2 SV=1	[more]
COPT1_ORYSJ	6.6e-28	53.73	Copper transporter 1 OS=Oryza sativa subsp. japonica GN=COPT1 PE=2 SV=1	[more]
COPT4_ARATH	2.1e-26	47.66	Copper transporter 4 OS=Arabidopsis thaliana GN=COPT4 PE=2 SV=2	[more]

BLAST of CSPI01G23470 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVF3_CUCSA	4.8e-78	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G526830 PE=4 SV=1	[more]
M5W0K7_PRUPE	8.9e-48	62.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012818mg PE=4 SV=1	[more]
A0A061GWU0_THECC	2.9e-46	64.10	Copper transporter, putative OS=Theobroma cacao GN=TCM_041729 PE=4 SV=1	[more]
V4UFV7_9ROSI	4.9e-46	62.09	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029475mg PE=4 SV=1	[more]
B9HPB1_POPTR	4.1e-45	62.25	Copper transporter family protein OS=Populus trichocarpa GN=POPTR_0009s04360g PE...	[more]

BLAST of CSPI01G23470 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G59030.1	2.9e-42	55.15	copper transporter 1	[more]
AT3G46900.1	1.1e-38	55.33	copper transporter 2	[more]
AT2G26975.1	6.1e-32	53.44	Ctr copper transporter family	[more]
AT2G37925.1	1.2e-27	47.66	copper transporter 4	[more]
AT5G59040.1	4.2e-25	43.36	copper transporter 3	[more]

BLAST of CSPI01G23470 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449455068\|ref\|XP_004145275.1\|	6.9e-78	100.00	PREDICTED: copper transporter 1-like [Cucumis sativus]	[more]
gi\|659115179\|ref\|XP_008457427.1\|	8.5e-76	97.30	PREDICTED: copper transporter 1 [Cucumis melo]	[more]
gi\|645216538\|ref\|XP_008221659.1\|	4.4e-48	61.44	PREDICTED: copper transporter 6 [Prunus mume]	[more]
gi\|657952085\|ref\|XP_008355761.1\|	5.7e-48	61.18	PREDICTED: copper transporter 6-like [Malus domestica]	[more]
gi\|595830448\|ref\|XP_007206073.1\|	1.3e-47	62.42	hypothetical protein PRUPE_ppa012818mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007274	Cop_transporter
IPR007274	Cop_transporter

Vocabulary: **Molecular Function**
Term	Definition
GO:0005375	copper ion transmembrane transporter activity
GO:0005375	copper ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0035434	copper ion transmembrane transport
GO:0035434	copper ion transmembrane transport

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035434	copper ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005375	copper ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G23470.2	CSPI01G23470.2	mRNA
CSPI01G23470.1	CSPI01G23470.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007274	Ctr copper transporter	PANTHER	PTHR12483	SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS	coord: 1..145 score: 8.7
IPR007274	Ctr copper transporter	PFAM	PF04145	Ctr	coord: 37..136 score: 5.5
None	No IPR available	PANTHER	PTHR12483:SF45	SUBFAMILY NOT NAMED	coord: 1..145 score: 8.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G23470	Watermelon (97103) v2	cpiwmbB015
CSPI01G23470	Watermelon (97103) v2	cpiwmbB044
CSPI01G23470	Watermelon (97103) v2	cpiwmbB086
CSPI01G23470	Wax gourd	cpiwgoB045
CSPI01G23470	Wax gourd	cpiwgoB048
CSPI01G23470	Wild cucumber (PI 183967)	cpicpiB019
CSPI01G23470	Wild cucumber (PI 183967)	cpicpiB040
CSPI01G23470	Cucumber (Gy14) v1	cgycpiB214
CSPI01G23470	Cucumber (Gy14) v1	cgycpiB254
CSPI01G23470	Cucumber (Gy14) v1	cgycpiB277
CSPI01G23470	Cucurbita maxima (Rimu)	cmacpiB220
CSPI01G23470	Cucurbita maxima (Rimu)	cmacpiB236
CSPI01G23470	Cucurbita maxima (Rimu)	cmacpiB430
CSPI01G23470	Cucurbita maxima (Rimu)	cmacpiB824
CSPI01G23470	Cucurbita moschata (Rifu)	cmocpiB206
CSPI01G23470	Cucurbita moschata (Rifu)	cmocpiB223
CSPI01G23470	Cucurbita moschata (Rifu)	cmocpiB420
CSPI01G23470	Cucurbita moschata (Rifu)	cmocpiB811
CSPI01G23470	Cucumber (Chinese Long) v2	cpicuB001
CSPI01G23470	Cucumber (Chinese Long) v2	cpicuB028
CSPI01G23470	Melon (DHL92) v3.5.1	cpimeB025
CSPI01G23470	Melon (DHL92) v3.5.1	cpimeB065
CSPI01G23470	Watermelon (Charleston Gray)	cpiwcgB004
CSPI01G23470	Watermelon (Charleston Gray)	cpiwcgB050
CSPI01G23470	Watermelon (97103) v1	cpiwmB004
CSPI01G23470	Watermelon (97103) v1	cpiwmB023
CSPI01G23470	Cucurbita pepo (Zucchini)	cpecpiB507
CSPI01G23470	Cucurbita pepo (Zucchini)	cpecpiB537
CSPI01G23470	Bottle gourd (USVL1VR-Ls)	cpilsiB031
CSPI01G23470	Bottle gourd (USVL1VR-Ls)	cpilsiB052
CSPI01G23470	Melon (DHL92) v3.6.1	cpimedB024
CSPI01G23470	Melon (DHL92) v3.6.1	cpimedB057
CSPI01G23470	Cucumber (Gy14) v2	cgybcpiB002
CSPI01G23470	Cucumber (Gy14) v2	cgybcpiB097
CSPI01G23470	Silver-seed gourd	carcpiB0177
CSPI01G23470	Silver-seed gourd	carcpiB0415
CSPI01G23470	Silver-seed gourd	carcpiB0476
CSPI01G23470	Silver-seed gourd	carcpiB1034
CSPI01G23470	Cucumber (Chinese Long) v3	cpicucB032
CSPI01G23470	Cucumber (Chinese Long) v3	cpicucB000
CSPI01G23470	Cucumber (Chinese Long) v3	cpicucB008
CSPI01G23470	Cucumber (Chinese Long) v3	cpicucB046