CSPI01G22590 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G22590
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationChr1 : 18154479 .. 18156662 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTACACTCAGAAGGAGGGAGTTGACTTTAATGAGATTTTTTCTCCGGTGGTGAGACATTCGTCCATTAGATTAATTTTATCTATTGTTGTTCACTTTGATATGTTCATTGAACAGATGGACGTCACCACAACATTTCTTCATGGAGAACTGGAGAAGGTGATTTACATGGCTCAACCTAAAGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGTCTTCACAAGTCCATCTATGGACTTAGACAATCTCCAAGACAGTGGTATATCAGGTTTGATACTTTCATTCTAAAGCAGGGGTTTCACAGGAACTCATATGATGCTTGTGTTTACTGGAAACTATCTCAGAGAGGTACATTTATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATCTGTCAACTCAAGAAACAACTAAGTAGTGAGTTTGAAATGAAAGATTTAGGTAAGCTAAAAAGGATCCTAGGCATGGATGTGAAAAGAGATAGGGAAAAAGGTTTGTTAACCGTTTCGCAGGAGAGTTATGTGATTAAACTGCTTGAAAAGTATAATATGTCTGGTTGCAAGGCAGTTTCTACACCCTTAGCATCTCATTTTAAACTTTCTTCATCTCAATGTCCTGTTATTGAGCAAGAAAGGTTAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGAAGTATTATGTACCTGATGATTTGTACTAGGCCTGACTTGGGTCATGCTATGAGTATGATAAGTAGGTTTATGTCAAATTCTGGGAAGGAACACTAGAATGCTGTTAAATGGGTGTTTCGATATCTAAAAGGTAGTGCTAGTGTATCATTGTGTTTTAGCAGGGATTGTGATAAGTCAGTATTGTTGAAAGGCTTCACAGATGTAGACTATGATGCAGATCTTGATAAAAGAAGGTCTCATCAGGTCACATTTTTCGCTTGTATGGTAATGTTGTCAGTTGGAAAGTTACCCTACAACCAGTTGTTGCTTTGTCGACTACTGAGTCAGAATATATTTCTCTTGGTGAAGCAGTGTGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAAGAGTTTATTCCTATCATCCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCATCTCATCATGAGCGGTCTAAGCATATCGATGTCAAATTTCATTATATCAGAAATGTTATTGCTCAGAAAGATGTTGAACTGGTCAAAGTTCATTACGATGAGAATTTGTCAGATATGTTAACCAAAGTTCTTCCAGCTCATAGGTTTAAATACCTATTAGATGAGCTGAATGTTAAATTCGGATGATAGGGTGTTGGGAGAATCAGTTTGGTGTGTCTTAAATAGCTTGTCATGAGGGAGATTTGTAGAAAAAATGACAAATATTTAAGGGTTTGAAAAATGGGATTTAAGTTAAGGGTAGAGTGGTAATTTGCCTTTATGGAAAATTTGTAATTATTTACATCTTCTTCCTTAGGTTTTTAAATTAACAAGACAAAAGGGGGAAAAAGAGATAGGCAGCCGACAGTTCACGCAAAGAAGAGAGTGAGGGAGAAATAGAGACGTTTGACGGGCATTGACGTCGGAGTTCCTGCACAACGGTGAACGACGCTCGTTTGCGGCATTACTCCATTGGTGATCGACTTTGGGCAAAAGCAACTTTCTTGCTTCAAACTTGTTTCAGAGTTGTATTCCGTCGGGTCTAAGTGTTGAGTTTGGGTCTCAACATCAGTTCAACGTGGGTCTCTTGGTCTCTCTTGGCATTTTGTGGACGGTATAGTTGGTTTGGTTGTGGTTGATTACAGATTACTTATTGTGCTGAACTCTGTAATTGTATCATATTTTGCTCTTAATAAAATCTCTCCAAGTTGGTTCTCAAAGTGGATGTAGACCGAATTGGTCGAACCACTATATATCATTGTGTTTACTCTTTTATCATTTTGTGGTTATTCTGAATTGTGCGTTCTATTTTGCATCGTTCTCTATTTAGTGTCGAAAGTATAACAATCTTCTTCATTTCTTCCATTTGTTGAGCCTGTAGCTCGAACATCCTTATATGCTATTCAATCATGCGCTTAGCTTTTTGAAGCTCGAGTCTTTGTTGCTCAATGAGAACTACATTAGCTTGTTCGATCGTCGTAGAGTGTGA

mRNA sequence

ATGGGCTACACTCAGAAGGAGGGAGTTGACTTTAATGAGATTTTTTCTCCGGTGGTGAGACATTCGTCCATTAGATTAATTTTATCTATTGTTGTTCACTTTGATATGTTCATTGAACAGATGGACGTCACCACAACATTTCTTCATGGAGAACTGGAGAAGGTGATTTACATGGCTCAACCTAAAGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGTCTTCACAAGTCCATCTATGGACTTAGACAATCTCCAAGACAGTGGTATATCAGGTTTGATACTTTCATTCTAAAGCAGGGGTTTCACAGGAACTCATATGATGCTTGTGTTTACTGGAAACTATCTCAGAGAGGTACATTTATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATCTGTCAACTCAAGAAACAACTAAGTAGTGAGTTTGAAATGAAAGATTTAGGTAAGCTAAAAAGGATCCTAGGCATGGATGTGAAAAGAGATAGGGAAAAAGGTTTGTTAACCGTTTCGCAGGAGAGTTATGTGATTAAACTGCTTGAAAAGTATAATATGTCTGGTTGCAAGGCAGTTTCTACACCCTTAGCATCTCATTTTAAACTTTCTTCATCTCAATGTCCTGTTATTGAGCAAGAAAGGTTAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGAAGTATTATGTACCTGATGATTTGTACTAGGCCTGACTTGGGTCATGCTATGAGTATGATAAGTAGGGATTGTGATAAGTCAGTATTGTTGAAAGGCTTCACAGATGTAGACTATGATGCAGATCTTGATAAAAGAAGTTGGAAAGTTACCCTACAACCAGTTGTTGCTTTGTCGACTACTGAGTCAGAATATATTTCTCTTGGTGAAGCAGTGTGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAAGAGTTTATTCCTATCATCCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCATCTCATCATGAGCGGTCTAAGCATATCGATGTCAAATTTCATTATATCAGAAATGTTATTGCTCAGAAAGATGTTGAACTGGTCAAAGTTCATTACGATGAGAATTTGTCAGATATGTTAACCAAAGTTCTTCCAGCTCATAGTTCCTGCACAACGGTGAACGACGCTCGTTTGCGGCATTACTCCATTGTTCAACGTGGGTCTCTTGGTCTCTCTTGGCATTTTGTGGACGGTATAGTTGGTTTGGTTGTGGTTGATTACAGATTACTTATTGTGCTGAACTCTCTCGAACATCCTTATATGCTATTCAATCATGCGCTTAGCTTTTTGAAGCTCGAGTCTTTGTTGCTCAATGAGAACTACATTAGCTTGTTCGATCGTCGTAGAGTGTGA

Coding sequence (CDS)

ATGGGCTACACTCAGAAGGAGGGAGTTGACTTTAATGAGATTTTTTCTCCGGTGGTGAGACATTCGTCCATTAGATTAATTTTATCTATTGTTGTTCACTTTGATATGTTCATTGAACAGATGGACGTCACCACAACATTTCTTCATGGAGAACTGGAGAAGGTGATTTACATGGCTCAACCTAAAGGCTATGAGGTGAAGGGTAAGGAAGACATGGTTTGTCGTCTTCACAAGTCCATCTATGGACTTAGACAATCTCCAAGACAGTGGTATATCAGGTTTGATACTTTCATTCTAAAGCAGGGGTTTCACAGGAACTCATATGATGCTTGTGTTTACTGGAAACTATCTCAGAGAGGTACATTTATCTATCTACTGTTGTATGTAGATGATATGATACTAGTGTCTAAGGATTATGCTGAAATCTGTCAACTCAAGAAACAACTAAGTAGTGAGTTTGAAATGAAAGATTTAGGTAAGCTAAAAAGGATCCTAGGCATGGATGTGAAAAGAGATAGGGAAAAAGGTTTGTTAACCGTTTCGCAGGAGAGTTATGTGATTAAACTGCTTGAAAAGTATAATATGTCTGGTTGCAAGGCAGTTTCTACACCCTTAGCATCTCATTTTAAACTTTCTTCATCTCAATGTCCTGTTATTGAGCAAGAAAGGTTAGAGATGTCTAATATTCCATATTGTAATGCTGTTGGAAGTATTATGTACCTGATGATTTGTACTAGGCCTGACTTGGGTCATGCTATGAGTATGATAAGTAGGGATTGTGATAAGTCAGTATTGTTGAAAGGCTTCACAGATGTAGACTATGATGCAGATCTTGATAAAAGAAGTTGGAAAGTTACCCTACAACCAGTTGTTGCTTTGTCGACTACTGAGTCAGAATATATTTCTCTTGGTGAAGCAGTGTGGTTGAAAAGAATTGTTGGTGAGTTGTTATCGCAAGAGTTTATTCCTATCATCCATTGTGATAGCCAGAGTGCTATTCATCTTGCGAAGAATCCATCTCATCATGAGCGGTCTAAGCATATCGATGTCAAATTTCATTATATCAGAAATGTTATTGCTCAGAAAGATGTTGAACTGGTCAAAGTTCATTACGATGAGAATTTGTCAGATATGTTAACCAAAGTTCTTCCAGCTCATAGTTCCTGCACAACGGTGAACGACGCTCGTTTGCGGCATTACTCCATTGTTCAACGTGGGTCTCTTGGTCTCTCTTGGCATTTTGTGGACGGTATAGTTGGTTTGGTTGTGGTTGATTACAGATTACTTATTGTGCTGAACTCTCTCGAACATCCTTATATGCTATTCAATCATGCGCTTAGCTTTTTGAAGCTCGAGTCTTTGTTGCTCAATGAGAACTACATTAGCTTGTTCGATCGTCGTAGAGTGTGA
Homology
[Close]
BLAST of CSPI01G22590 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 7.4e-104
Identity = 198/431 (45.94%), Postives = 277/431 (64.27%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G+ QK+G+DF+EIFSPVV+ +SIR ILS+    D+ +EQ+DV T FLHG+LE+ IYM QP
Sbjct: 882  GFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQP 941

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+EV GK+ MVC+L+KS+YGL+Q+PRQWY++FD+F+  Q + +   D CVY+K      
Sbjct: 942  EGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENN 1001

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
            FI LLLYVDDM++V KD   I +LK  LS  F+MKDLG  ++ILGM + R+R    L +S
Sbjct: 1002 FIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLS 1061

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            QE Y+ ++LE++NM   K VSTPLA H KLS   CP   +E+  M+ +PY +AVGS+MY 
Sbjct: 1062 QEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYA 1121

Query: 242  MICTRPDL------------------GHAMSMISR-------DC----DKSVLLKGFTDV 301
            M+CTRPD+                    A+  I R       DC        +LKG+TD 
Sbjct: 1122 MVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDA 1181

Query: 302  DYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKRIV 361
            D   D+D R               SW+  LQ  VALSTTE+EYI+  E     +WLKR +
Sbjct: 1182 DMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFL 1241

Query: 362  GELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHYDE 385
             EL   +   +++CDSQSAI L+KN  +H R+KHIDV++H+IR ++  + ++++K+  +E
Sbjct: 1242 QELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNE 1301

[Close]
BLAST of CSPI01G22590 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 190.3 bits (482), Expect = 4.9e-47
Identity = 104/267 (38.95%), Postives = 166/267 (62.17%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G+TQK  +D+ E F+PV R SS R ILS+V+ +++ + QMDV T FL+G L++ IYM  P
Sbjct: 962  GFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLP 1021

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G  +    D VC+L+K+IYGL+Q+ R W+  F+  + +  F  +S D C+Y  +  +G 
Sbjct: 1022 QG--ISCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCIY--ILDKGN 1081

Query: 122  F---IYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLL 181
                IY+LLYVDD+++ + D   +   K+ L  +F M DL ++K  +G+ ++   +K  +
Sbjct: 1082 INENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDK--I 1141

Query: 182  TVSQESYVIKLLEKYNMSGCKAVSTPLAS--HFKLSSSQCPVIEQERLEMSNIPYCNAVG 241
             +SQ +YV K+L K+NM  C AVSTPL S  +++L +S          E  N P  + +G
Sbjct: 1142 YLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSD---------EDCNTPCRSLIG 1201

Query: 242  SIMYLMICTRPDLGHAMSMISRDCDKS 264
             +MY+M+CTRPDL  A++++SR   K+
Sbjct: 1202 CLMYIMLCTRPDLTTAVNILSRYSSKN 1213

[Close]
BLAST of CSPI01G22590 vs. Swiss-Prot
Match: YCH4_YEAST (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 2.9e-23
Identity = 63/218 (28.90%), Postives = 120/218 (55.05%), Query Frame = 1 

Query: 41  MDVTTTFLHGELEKVIYMAQPKGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILK 100
           MDV T FL+  +++ IY+ QP G+  +   D V  L+  +YGL+Q+P  W    +  + K
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 101 QGFHRNSYDACVYWKLSQRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGK 160
            GF R+  +  +Y++ +  G  IY+ +YVDD+++ +       ++K++L+  + MKDLGK
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 161 LKRILGMDVKRDREKGLLTVSQESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIE 220
           + + LG+++ +    G +T+S + Y+ K   +  ++  K   TPL +   L  +  P ++
Sbjct: 121 VDKFLGLNIHQS-SNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLK 180

Query: 221 QERLEMSNIPYCNAVGSIMYLMICTRPDLGHAMSMISR 259
                    PY + VG +++     RPD+ + +S++SR
Sbjct: 181 ------DITPYQSIVGQLLFCANTGRPDISYPVSLLSR 210

[Close]
BLAST of CSPI01G22590 vs. Swiss-Prot
Match: YH41B_YEAST (Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-H PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.4e-17
Identity = 62/257 (24.12%), Postives = 129/257 (50.19%), Query Frame = 1 

Query: 11   FNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQPKGYEVKGKE 70
            ++ I +  + H+ I++ L I  + +MF++ +D+   FL+ +LE+ IY+  P         
Sbjct: 1352 YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPHDRRC---- 1411

Query: 71   DMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGTFIYLLLYVD 130
              V +L+K++YGL+QSP++W      ++   G   NSY   +Y    +    + + +YVD
Sbjct: 1412 --VVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKN---LMIAVYVD 1471

Query: 131  DMILVSKDYAEICQLKKQLSSEFEMKDLGKL------KRILGMDVKRDREKGLLTVSQES 190
            D ++ + +   + +   +L S FE+K  G L        ILGMD+  ++  G + ++ +S
Sbjct: 1472 DCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKS 1531

Query: 191  YVIKLLEKYN--MSGCKAVSTPLASHFKLSSSQCPV-IEQERLEMSNIPYCNAVGSIMYL 250
            ++ ++ +KYN  +   +  S P  S +K+   +  + + +E      +     +G + Y+
Sbjct: 1532 FINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLLGELNYV 1591

Query: 251  MICTRPDLGHAMSMISR 259
                R D+  A+  ++R
Sbjct: 1592 RHKCRYDINFAVKKVAR 1599

[Close]
BLAST of CSPI01G22590 vs. Swiss-Prot
Match: YJ41B_YEAST (Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY4B-J PE=3 SV=3)

HSP 1 Score: 90.9 bits (224), Expect = 4.0e-17
Identity = 62/257 (24.12%), Postives = 129/257 (50.19%), Query Frame = 1 

Query: 11   FNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQPKGYEVKGKE 70
            ++ I +  + H+ I++ L I  + +MF++ +D+   FL+ +LE+ IY+  P         
Sbjct: 1353 YSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLEEEIYIPHPHDRRC---- 1412

Query: 71   DMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGTFIYLLLYVD 130
              V +L+K++YGL+QSP++W      ++   G   NSY   +Y    +    + + +YVD
Sbjct: 1413 --VVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGLYQTEDKN---LMIAVYVD 1472

Query: 131  DMILVSKDYAEICQLKKQLSSEFEMKDLGKL------KRILGMDVKRDREKGLLTVSQES 190
            D ++ + +   + +   +L S FE+K  G L        ILGMD+  ++  G + ++ +S
Sbjct: 1473 DCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGMDLVYNKRLGTIDLTLKS 1532

Query: 191  YVIKLLEKYN--MSGCKAVSTPLASHFKLSSSQCPV-IEQERLEMSNIPYCNAVGSIMYL 250
            ++ ++ +KYN  +   +  S P  S +K+   +  + + +E      +     +G + Y+
Sbjct: 1533 FINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEFRQGVLKLQQLLGELNYV 1592

Query: 251  MICTRPDLGHAMSMISR 259
                R D+  A+  ++R
Sbjct: 1593 RHKCRYDIEFAVKKVAR 1600

[Close]
BLAST of CSPI01G22590 vs. TrEMBL
Match: A0A151S124_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_029805 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.4e-117
Identity = 218/434 (50.23%), Postives = 301/434 (69.35%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G+ QKEG+DFNEIFSPVVRH+SIR++L+ V  FD+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 583  GFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQP 642

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V  KE +VC+L KS+YGL+Q+PRQWY +FD+F++ QG+ R+ YD C+Y++    GT
Sbjct: 643  EGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGT 702

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
            FIYLLLYVDDM++ S+D + I +LK QL++EFEMK+LG  K+ILGM++ RDR+ G L +S
Sbjct: 703  FIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLS 762

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q+ Y+ +LL+++NM+ CK VSTPLA+HFKLSS  CP  ++E   MS++PY +AVGS+MY 
Sbjct: 763  QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 822

Query: 242  MICTRPDLGHAMSMISR------------------------------DCDKSVL--LKGF 301
            M+CTRPDL +A+SM+SR                              D +K+    + GF
Sbjct: 823  MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGF 882

Query: 302  TDVDYDADLDKR---------------SWKVTLQPVVALSTTESEYIS----LGEAVWLK 361
             D DY  DLD+R               SWK +LQ + ALSTTE+EY+S    + EA+W++
Sbjct: 883  VDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIR 942

Query: 362  RIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVH 385
             +V EL   + +  + CDSQSAIHL KN  +H+++KHIDVK H+IR+++   +V L KVH
Sbjct: 943  GLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVH 1002

[Close]
BLAST of CSPI01G22590 vs. TrEMBL
Match: A0A151SEX3_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=KK1_024734 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.4e-117
Identity = 218/434 (50.23%), Postives = 301/434 (69.35%), Query Frame = 1 

Query: 2   GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
           G+ QKEG+DFNEIFSPVVRH+SIR++L+ V  FD+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 54  GFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQP 113

Query: 62  KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
           +G+ V  KE +VC+L KS+YGL+Q+PRQWY +FD+F++ QG+ R+ YD C+Y++    GT
Sbjct: 114 EGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGT 173

Query: 122 FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
           FIYLLLYVDDM++ S+D + I +LK QL++EFEMK+LG  K+ILGM++ RDR+ G L +S
Sbjct: 174 FIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLS 233

Query: 182 QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
           Q+ Y+ +LL+++NM+ CK VSTPLA+HFKLSS  CP  ++E   MS++PY +AVGS+MY 
Sbjct: 234 QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 293

Query: 242 MICTRPDLGHAMSMISR------------------------------DCDKSVL--LKGF 301
           M+CTRPDL +A+SM+SR                              D +K+    + GF
Sbjct: 294 MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGF 353

Query: 302 TDVDYDADLDKR---------------SWKVTLQPVVALSTTESEYIS----LGEAVWLK 361
            D DY  DLD+R               SWK +LQ + ALSTTE+EY+S    + EA+W++
Sbjct: 354 VDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIR 413

Query: 362 RIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVH 385
            +V EL   + +  + CDSQSAIHL KN  +H+++KHIDVK H+IR+++   +V L KVH
Sbjct: 414 GLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVH 473

[Close]
BLAST of CSPI01G22590 vs. TrEMBL
Match: Q2QQ81_ORYSJ (Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. japonica GN=LOC_Os12g31920 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 1.8e-112
Identity = 217/433 (50.12%), Postives = 294/433 (67.90%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            GY+Q  GVD+N++FSPVV+HSSIR  LSIV   D+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 889  GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 948

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKE  VC+L +S+YGL+QSPRQW  RFD+F+L   F R+ YD+CVY K    G+
Sbjct: 949  EGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIK-HVNGS 1008

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   EI +LKK LSSEF+MKDLG  K+ILGM++ RDR+ GLL +S
Sbjct: 1009 PIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLS 1068

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q +Y+ K+L+++NM   KAVSTP+A HFKLS++QCP I+ E   MS +PY +AVGS+MY 
Sbjct: 1069 QHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYA 1128

Query: 242  MICTRPDLGHAMSMISR-------------------------DC------DKSVLLKGFT 301
            M+C+RPDL +AMS++SR                          C      DK ++  G+ 
Sbjct: 1129 MVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKGLI--GYV 1188

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D DY ADLD+R               SW+ TLQ VVALSTTE+EY+++ EA    +WLK 
Sbjct: 1189 DSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKG 1248

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   E    +HCDSQSAI+L K+   HER+KHID+K+H++R+VI +  +++ K+  
Sbjct: 1249 LYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKIST 1308

[Close]
BLAST of CSPI01G22590 vs. TrEMBL
Match: Q75HA9_ORYSJ (Integrase core domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g46450 PE=4 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 8.8e-112
Identity = 215/433 (49.65%), Postives = 291/433 (67.21%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G++Q  GVD+N++FSPVV+HSSIR   SIV   D+ +EQ+DV TTFLHGELE+ IYM QP
Sbjct: 878  GFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQP 937

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKED VC+L +S+YGL+QSPRQWY RFD+F+L  GF R+ +D+CVY K    G+
Sbjct: 938  EGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVN-GS 997

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   +I  LKKQLSSEF+MKDLG  K+ILGM++ RDR  GLL +S
Sbjct: 998  PIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLS 1057

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q+SY+ K+L+++NM   K VSTP+A HFKLS+ QC   +++   MS +PY +AVGS+MY 
Sbjct: 1058 QQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYA 1117

Query: 242  MICTRPDLGHAMSMISR-------------------------------DCDKSVLLKGFT 301
            M+C+ PDL HAMS++SR                                 DK ++  G+ 
Sbjct: 1118 MVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRIDKGLV--GYV 1177

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D D+ ADLDKR               SWK TLQPVVA STTE+EY+++ EA    VWLK 
Sbjct: 1178 DSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQSTTEAEYMAIAEACKESVWLKG 1237

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   +    + CDSQSAI L K+   HER+KHID+K+HY+R+++AQ  +++ K+  
Sbjct: 1238 LFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDIVAQGKLKVCKISI 1297

[Close]
BLAST of CSPI01G22590 vs. TrEMBL
Match: Q01M93_ORYSA (OSIGBa0146N20.7 protein OS=Oryza sativa GN=OSIGBa0146N20.7 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111
Identity = 216/433 (49.88%), Postives = 293/433 (67.67%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            GY+Q  GVD+N++FSPVV+HSSIR  LSIV   D+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 891  GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 950

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKE  VC+L +S+YGL+QSPRQW  RFD+F+L   F R+ YD+CVY K    G+
Sbjct: 951  EGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIK-HVNGS 1010

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   EI +LKK LSSEF+MKDLG  K+ILGM++ RDR+ GLL +S
Sbjct: 1011 PIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLS 1070

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q +Y+ K+L+++NM   KAVSTP+A HFKLS++QCP  + E   MS +PY +AVGS+MY 
Sbjct: 1071 QHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYA 1130

Query: 242  MICTRPDLGHAMSMISR-------------------------DC------DKSVLLKGFT 301
            M+C+RPDL +AMS++SR                          C      DK ++  G+ 
Sbjct: 1131 MVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRTDKGLI--GYV 1190

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D DY ADLD+R               SW+ TLQ VVALSTTE+EY+++ EA    +WLK 
Sbjct: 1191 DSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKG 1250

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   E    +HCDSQSAI+L K+   HER+KHID+K+H++R+VI +  +++ K+  
Sbjct: 1251 LYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKICT 1310

[Close]
BLAST of CSPI01G22590 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 197.2 bits (500), Expect = 2.2e-50
Identity = 129/409 (31.54%), Postives = 210/409 (51.34%), Query Frame = 1 

Query: 2   GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
           GYTQ+EG+DF E FSPV + +S++LIL+I   ++  + Q+D++  FL+G+L++ IYM  P
Sbjct: 154 GYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLP 213

Query: 62  KGYEVKGKEDM----VCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLS 121
            GY  +  + +    VC L KSIYGL+Q+ RQW+++F   ++  GF ++  D   + K++
Sbjct: 214 PGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKIT 273

Query: 122 QRGTFIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGL 181
               F+ +L+YVDD+I+ S + A + +LK QL S F+++DLG LK  LG+++ R      
Sbjct: 274 AT-LFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG-- 333

Query: 182 LTVSQESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGS 241
           + + Q  Y + LL++  + GCK  S P+      S+         +       Y   +G 
Sbjct: 334 INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAK------AYRRLIGR 393

Query: 242 IMYLMICTRPDLGHAMSMISR------------------------------DCDKSVLLK 301
           +MYL I TR D+  A++ +S+                                   + L+
Sbjct: 394 LMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQ 453

Query: 302 GFTDVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLG----EAVW 357
            F+D  + +  D R               SWK   Q VV+ S+ E+EY +L     E +W
Sbjct: 454 VFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMW 513

[Close]
BLAST of CSPI01G22590 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 7.1e-12
Identity = 50/134 (37.31%), Postives = 74/134 (55.22%), Query Frame = 1 

Query: 123 IYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVSQ 182
           +YLLLYVDD++L       +  L  QLSS F MKDLG +   LG+ +K     GL  +SQ
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKT-HPSGLF-LSQ 60

Query: 183 ESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYLM 242
             Y  ++L    M  CK +STPL    KL+SS       +  +  +I     VG++ YL 
Sbjct: 61  TKYAEQILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSI-----VGALQYLT 120

Query: 243 ICTRPDLGHAMSMI 257
           + TRPD+ +A++++
Sbjct: 121 L-TRPDISYAVNIV 124

[Close]
BLAST of CSPI01G22590 vs. NCBI nr
Match: gi|1012337233|gb|KYP48513.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 430.6 bits (1106), Expect = 3.4e-117
Identity = 218/434 (50.23%), Postives = 301/434 (69.35%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G+ QKEG+DFNEIFSPVVRH+SIR++L+ V  FD+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 583  GFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQP 642

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V  KE +VC+L KS+YGL+Q+PRQWY +FD+F++ QG+ R+ YD C+Y++    GT
Sbjct: 643  EGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGT 702

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
            FIYLLLYVDDM++ S+D + I +LK QL++EFEMK+LG  K+ILGM++ RDR+ G L +S
Sbjct: 703  FIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLS 762

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q+ Y+ +LL+++NM+ CK VSTPLA+HFKLSS  CP  ++E   MS++PY +AVGS+MY 
Sbjct: 763  QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 822

Query: 242  MICTRPDLGHAMSMISR------------------------------DCDKSVL--LKGF 301
            M+CTRPDL +A+SM+SR                              D +K+    + GF
Sbjct: 823  MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGF 882

Query: 302  TDVDYDADLDKR---------------SWKVTLQPVVALSTTESEYIS----LGEAVWLK 361
             D DY  DLD+R               SWK +LQ + ALSTTE+EY+S    + EA+W++
Sbjct: 883  VDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIR 942

Query: 362  RIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVH 385
             +V EL   + +  + CDSQSAIHL KN  +H+++KHIDVK H+IR+++   +V L KVH
Sbjct: 943  GLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVH 1002

[Close]
BLAST of CSPI01G22590 vs. NCBI nr
Match: gi|1012342160|gb|KYP53356.1| (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 430.6 bits (1106), Expect = 3.4e-117
Identity = 218/434 (50.23%), Postives = 301/434 (69.35%), Query Frame = 1 

Query: 2   GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
           G+ QKEG+DFNEIFSPVVRH+SIR++L+ V  FD+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 54  GFYQKEGIDFNEIFSPVVRHTSIRILLAFVALFDLELEQLDVKTAFLHGELEEEIYMDQP 113

Query: 62  KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
           +G+ V  KE +VC+L KS+YGL+Q+PRQWY +FD+F++ QG+ R+ YD C+Y++    GT
Sbjct: 114 EGFVVPSKEHLVCQLKKSLYGLKQAPRQWYKKFDSFMIGQGYSRSKYDDCIYFQQFPDGT 173

Query: 122 FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
           FIYLLLYVDDM++ S+D + I +LK QL++EFEMK+LG  K+ILGM++ RDR+ G L +S
Sbjct: 174 FIYLLLYVDDMLIASRDKSLISKLKAQLNNEFEMKELGAAKKILGMEIHRDRQVGKLFLS 233

Query: 182 QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
           Q+ Y+ +LL+++NM+ CK VSTPLA+HFKLSS  CP  ++E   MS++PY +AVGS+MY 
Sbjct: 234 QQKYIERLLDRFNMNNCKPVSTPLAAHFKLSSDLCPQTKEEMERMSHVPYASAVGSLMYA 293

Query: 242 MICTRPDLGHAMSMISR------------------------------DCDKSVL--LKGF 301
           M+CTRPDL +A+SM+SR                              D +K+    + GF
Sbjct: 294 MVCTRPDLAYAVSMVSRYMHNPGKDHWSAVKWIFRYLKGTSNIGLVFDRNKATTNNVAGF 353

Query: 302 TDVDYDADLDKR---------------SWKVTLQPVVALSTTESEYIS----LGEAVWLK 361
            D DY  DLD+R               SWK +LQ + ALSTTE+EY+S    + EA+W++
Sbjct: 354 VDSDYGGDLDRRRSLSGYIFTLCNSAISWKASLQSIAALSTTEAEYVSATEGVKEALWIR 413

Query: 362 RIVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVH 385
            +V EL   + +  + CDSQSAIHL KN  +H+++KHIDVK H+IR+++   +V L KVH
Sbjct: 414 GLVKELGLTQDVLTVFCDSQSAIHLTKNSRYHDKTKHIDVKHHFIRDIVTIGEVLLQKVH 473

[Close]
BLAST of CSPI01G22590 vs. NCBI nr
Match: gi|77555860|gb|ABA98656.1| (retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group])

HSP 1 Score: 414.5 bits (1064), Expect = 2.5e-112
Identity = 217/433 (50.12%), Postives = 294/433 (67.90%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            GY+Q  GVD+N++FSPVV+HSSIR  LSIV   D+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 889  GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 948

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKE  VC+L +S+YGL+QSPRQW  RFD+F+L   F R+ YD+CVY K    G+
Sbjct: 949  EGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIK-HVNGS 1008

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   EI +LKK LSSEF+MKDLG  K+ILGM++ RDR+ GLL +S
Sbjct: 1009 PIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLS 1068

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q +Y+ K+L+++NM   KAVSTP+A HFKLS++QCP I+ E   MS +PY +AVGS+MY 
Sbjct: 1069 QHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYA 1128

Query: 242  MICTRPDLGHAMSMISR-------------------------DC------DKSVLLKGFT 301
            M+C+RPDL +AMS++SR                          C      DK ++  G+ 
Sbjct: 1129 MVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLRGTTYSCLKFGRTDKGLI--GYV 1188

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D DY ADLD+R               SW+ TLQ VVALSTTE+EY+++ EA    +WLK 
Sbjct: 1189 DSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKG 1248

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   E    +HCDSQSAI+L K+   HER+KHID+K+H++R+VI +  +++ K+  
Sbjct: 1249 LYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKIST 1308

[Close]
BLAST of CSPI01G22590 vs. NCBI nr
Match: gi|40538906|gb|AAR87163.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 412.1 bits (1058), Expect = 1.3e-111
Identity = 215/433 (49.65%), Postives = 291/433 (67.21%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            G++Q  GVD+N++FSPVV+HSSIR   SIV   D+ +EQ+DV TTFLHGELE+ IYM QP
Sbjct: 878  GFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQP 937

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKED VC+L +S+YGL+QSPRQWY RFD+F+L  GF R+ +D+CVY K    G+
Sbjct: 938  EGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRFDSFMLSHGFKRSEFDSCVYIKFVN-GS 997

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   +I  LKKQLSSEF+MKDLG  K+ILGM++ RDR  GLL +S
Sbjct: 998  PIYLLLYVDDMLIAAKSKEQITTLKKQLSSEFDMKDLGAAKKILGMEITRDRNSGLLFLS 1057

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q+SY+ K+L+++NM   K VSTP+A HFKLS+ QC   +++   MS +PY +AVGS+MY 
Sbjct: 1058 QQSYIKKVLQRFNMHDAKPVSTPIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYA 1117

Query: 242  MICTRPDLGHAMSMISR-------------------------------DCDKSVLLKGFT 301
            M+C+ PDL HAMS++SR                                 DK ++  G+ 
Sbjct: 1118 MVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLRGTADACLKFGRIDKGLV--GYV 1177

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D D+ ADLDKR               SWK TLQPVVA STTE+EY+++ EA    VWLK 
Sbjct: 1178 DSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQPVVAQSTTEAEYMAIAEACKESVWLKG 1237

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   +    + CDSQSAI L K+   HER+KHID+K+HY+R+++AQ  +++ K+  
Sbjct: 1238 LFAELCGVDSCINLFCDSQSAICLTKDQMFHERTKHIDIKYHYVRDIVAQGKLKVCKISI 1297

[Close]
BLAST of CSPI01G22590 vs. NCBI nr
Match: gi|116309003|emb|CAH66122.1| (OSIGBa0146N20.7 [Oryza sativa Indica Group])

HSP 1 Score: 411.8 bits (1057), Expect = 1.6e-111
Identity = 216/433 (49.88%), Postives = 293/433 (67.67%), Query Frame = 1 

Query: 2    GYTQKEGVDFNEIFSPVVRHSSIRLILSIVVHFDMFIEQMDVTTTFLHGELEKVIYMAQP 61
            GY+Q  GVD+N++FSPVV+HSSIR  LSIV   D+ +EQ+DV T FLHGELE+ IYM QP
Sbjct: 891  GYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQP 950

Query: 62   KGYEVKGKEDMVCRLHKSIYGLRQSPRQWYIRFDTFILKQGFHRNSYDACVYWKLSQRGT 121
            +G+ V GKE  VC+L +S+YGL+QSPRQW  RFD+F+L   F R+ YD+CVY K    G+
Sbjct: 951  EGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRFDSFMLSHSFKRSKYDSCVYIK-HVNGS 1010

Query: 122  FIYLLLYVDDMILVSKDYAEICQLKKQLSSEFEMKDLGKLKRILGMDVKRDREKGLLTVS 181
             IYLLLYVDDM++ +K   EI +LKK LSSEF+MKDLG  K+ILGM++ RDR+ GLL +S
Sbjct: 1011 PIYLLLYVDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLS 1070

Query: 182  QESYVIKLLEKYNMSGCKAVSTPLASHFKLSSSQCPVIEQERLEMSNIPYCNAVGSIMYL 241
            Q +Y+ K+L+++NM   KAVSTP+A HFKLS++QCP  + E   MS +PY +AVGS+MY 
Sbjct: 1071 QHNYIKKVLQRFNMQNAKAVSTPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYA 1130

Query: 242  MICTRPDLGHAMSMISR-------------------------DC------DKSVLLKGFT 301
            M+C+RPDL +AMS++SR                          C      DK ++  G+ 
Sbjct: 1131 MVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLRGTTYSCLKFGRTDKGLI--GYV 1190

Query: 302  DVDYDADLDKR---------------SWKVTLQPVVALSTTESEYISLGEA----VWLKR 361
            D DY ADLD+R               SW+ TLQ VVALSTTE+EY+++ EA    +WLK 
Sbjct: 1191 DSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQSVVALSTTEAEYMAICEACKELIWLKG 1250

Query: 362  IVGELLSQEFIPIIHCDSQSAIHLAKNPSHHERSKHIDVKFHYIRNVIAQKDVELVKVHY 385
            +  EL   E    +HCDSQSAI+L K+   HER+KHID+K+H++R+VI +  +++ K+  
Sbjct: 1251 LYAELSGVESCISLHCDSQSAIYLTKDQMFHERTKHIDIKYHFVRDVIEEGKLKVCKICT 1310

The following BLAST results are available for this feature:
BLAST of CSPI01G22590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
POLX_TOBAC7.4e-10445.94Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
COPIA_DROME4.9e-4738.95Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
YCH4_YEAST2.9e-2328.90Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
YH41B_YEAST2.4e-1724.12Transposon Ty4-H Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
YJ41B_YEAST4.0e-1724.12Transposon Ty4-J Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of CSPI01G22590 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A151S124_CAJCA2.4e-11750.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
A0A151SEX3_CAJCA2.4e-11750.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cajanus cajan GN=... [more]
Q2QQ81_ORYSJ1.8e-11250.12Retrotransposon protein, putative, Ty1-copia subclass OS=Oryza sativa subsp. jap... [more]
Q75HA9_ORYSJ8.8e-11249.65Integrase core domain containing protein OS=Oryza sativa subsp. japonica GN=LOC_... [more]
Q01M93_ORYSA1.1e-11149.88OSIGBa0146N20.7 protein OS=Oryza sativa GN=OSIGBa0146N20.7 PE=4 SV=1[more]
BLAST of CSPI01G22590 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.12.2e-5031.54 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00810.17.1e-1237.31ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CSPI01G22590 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1012337233|gb|KYP48513.1|3.4e-11750.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|1012342160|gb|KYP53356.1|3.4e-11750.23Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan][more]
gi|77555860|gb|ABA98656.1|2.5e-11250.12retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Gro... [more]
gi|40538906|gb|AAR87163.1|1.3e-11149.65putative polyprotein [Oryza sativa Japonica Group][more]
gi|116309003|emb|CAH66122.1|1.6e-11149.88OSIGBa0146N20.7 [Oryza sativa Indica Group][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005488 binding
molecular_function GO:0004518 nuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G22590.1CSPI01G22590.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..206
score: 3.8
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..324
score: 4.0E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 221..353
score: 1.23E-7coord: 18..185
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G22590Cucumber (Gy14) v2cgybcpiB002
CSPI01G22590Cucumber (Gy14) v2cgybcpiB159
CSPI01G22590Cucumber (Gy14) v2cgybcpiB253
CSPI01G22590Silver-seed gourdcarcpiB0336
CSPI01G22590Silver-seed gourdcarcpiB0337
CSPI01G22590Silver-seed gourdcarcpiB0476
CSPI01G22590Silver-seed gourdcarcpiB0762
CSPI01G22590Cucumber (Chinese Long) v3cpicucB058
CSPI01G22590Cucumber (Chinese Long) v3cpicucB000
CSPI01G22590Cucumber (Chinese Long) v3cpicucB037
CSPI01G22590Watermelon (97103) v2cpiwmbB025
CSPI01G22590Watermelon (97103) v2cpiwmbB044
CSPI01G22590Watermelon (97103) v2cpiwmbB058
CSPI01G22590Wax gourdcpiwgoB018
CSPI01G22590Wax gourdcpiwgoB048
CSPI01G22590Wild cucumber (PI 183967)cpicpiB024
CSPI01G22590Wild cucumber (PI 183967)cpicpiB046
CSPI01G22590Cucumber (Gy14) v1cgycpiB053
CSPI01G22590Cucumber (Gy14) v1cgycpiB328
CSPI01G22590Cucurbita maxima (Rimu)cmacpiB220
CSPI01G22590Cucurbita maxima (Rimu)cmacpiB430
CSPI01G22590Cucurbita maxima (Rimu)cmacpiB544
CSPI01G22590Cucurbita maxima (Rimu)cmacpiB584
CSPI01G22590Cucurbita moschata (Rifu)cmocpiB206
CSPI01G22590Cucurbita moschata (Rifu)cmocpiB420
CSPI01G22590Cucurbita moschata (Rifu)cmocpiB572
CSPI01G22590Cucurbita moschata (Rifu)cmocpiB573
CSPI01G22590Cucumber (Chinese Long) v2cpicuB001
CSPI01G22590Cucumber (Chinese Long) v2cpicuB032
CSPI01G22590Melon (DHL92) v3.5.1cpimeB025
CSPI01G22590Melon (DHL92) v3.5.1cpimeB084
CSPI01G22590Watermelon (Charleston Gray)cpiwcgB032
CSPI01G22590Watermelon (Charleston Gray)cpiwcgB050
CSPI01G22590Watermelon (Charleston Gray)cpiwcgB062
CSPI01G22590Watermelon (97103) v1cpiwmB023
CSPI01G22590Watermelon (97103) v1cpiwmB069
CSPI01G22590Watermelon (97103) v1cpiwmB071
CSPI01G22590Cucurbita pepo (Zucchini)cpecpiB267
CSPI01G22590Cucurbita pepo (Zucchini)cpecpiB507
CSPI01G22590Cucurbita pepo (Zucchini)cpecpiB536
CSPI01G22590Bottle gourd (USVL1VR-Ls)cpilsiB007
CSPI01G22590Bottle gourd (USVL1VR-Ls)cpilsiB031
CSPI01G22590Melon (DHL92) v3.6.1cpimedB010
CSPI01G22590Melon (DHL92) v3.6.1cpimedB024