CSPI01G17780 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCTGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGGTAACTGAGGAACTTATGACAGCTAAACTCTACAAATGTAATTTTTCACTACAATCTTGACCACCCCCCTTCCTAACAATCTCTATATTTATTTTGGTTCAGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA ATGCCTCTGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA ATGCCTCTGCAGAATTCTACTCCAATTCCTGTTCTTGACTTAAACCAGAAGGCAAAGACTTCTTCTAGGAAGAAAGCCAGTCAACATAACTCGACCCCGGTTTTCGACTTGAACCAGAAGGAAAGAATGTGCAGTGGGAGAGATGCTAGCGAGAGAAACATCACTCCATTTTTTGACTTGAACCAAATTTCGATAGAGGAAGAGGAATTGCAGACCCATTACGAGCCGCTGAGAGTTGATGAGCTGAAGAAAAGCCTTCTTCGAGGAGGGAACGATGAGCAGCAAAACGATATCAAGATTTCTGCATGCAGGAGTATTGGAGATGGTCCAAGTCGAGCTGGTAAAAGAAAAATTTCATGGCAAGATCAGGTAGCTTTAAGGGTTTGA
BLAST of CSPI01G17780 vs. TrEMBL
Match: A0A0A0LW13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256780 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 1.7e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI01G17780 vs. TrEMBL
Match: A0A0A0LTB8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G256785 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 1.0e-41 Identity = 97/128 (75.78%), Postives = 97/128 (75.78%), Query Frame = 1
BLAST of CSPI01G17780 vs. TrEMBL
Match: A0A0S3R6D4_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G413600 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.2e-33 Identity = 78/131 (59.54%), Postives = 105/131 (80.15%), Query Frame = 1
BLAST of CSPI01G17780 vs. TrEMBL
Match: A0A0L9TQV1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g243200 PE=4 SV=1) HSP 1 Score: 149.8 bits (377), Expect = 2.2e-33 Identity = 78/131 (59.54%), Postives = 105/131 (80.15%), Query Frame = 1
BLAST of CSPI01G17780 vs. TrEMBL
Match: B9STT5_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0623840 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.5e-32 Identity = 76/127 (59.84%), Postives = 97/127 (76.38%), Query Frame = 1
BLAST of CSPI01G17780 vs. TAIR10
Match: AT5G57910.1 (AT5G57910.1 unknown protein) HSP 1 Score: 65.1 bits (157), Expect = 3.7e-11 Identity = 47/109 (43.12%), Postives = 62/109 (56.88%), Query Frame = 1
BLAST of CSPI01G17780 vs. TAIR10
Match: AT4G30630.1 (AT4G30630.1 unknown protein) HSP 1 Score: 58.2 bits (139), Expect = 4.5e-09 Identity = 42/136 (30.88%), Postives = 64/136 (47.06%), Query Frame = 1
BLAST of CSPI01G17780 vs. NCBI nr
Match: gi|778665044|ref|XP_011648472.1| (PREDICTED: uncharacterized protein LOC101209712 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI01G17780 vs. NCBI nr
Match: gi|700210073|gb|KGN65169.1| (hypothetical protein Csa_1G256780 [Cucumis sativus]) HSP 1 Score: 256.5 bits (654), Expect = 2.4e-65 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1
BLAST of CSPI01G17780 vs. NCBI nr
Match: gi|659086278|ref|XP_008443848.1| (PREDICTED: uncharacterized protein LOC103487344 [Cucumis melo]) HSP 1 Score: 252.3 bits (643), Expect = 4.6e-64 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 1
BLAST of CSPI01G17780 vs. NCBI nr
Match: gi|700210074|gb|KGN65170.1| (hypothetical protein Csa_1G256785 [Cucumis sativus]) HSP 1 Score: 177.6 bits (449), Expect = 1.4e-41 Identity = 97/128 (75.78%), Postives = 97/128 (75.78%), Query Frame = 1
BLAST of CSPI01G17780 vs. NCBI nr
Match: gi|1021473654|ref|XP_016200305.1| (PREDICTED: uncharacterized protein LOC107641321 [Arachis ipaensis]) HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33 Identity = 78/120 (65.00%), Postives = 95/120 (79.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |