CSPI01G17050 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACAAAATTCTCAGAACACACAAACACAAACACTCCAACAACAACTTCTCATCAACGGCGGCCACACGCCGGAAAGTTATATTTACAAAGGCGGCTACCACGGCGGAGGTTCCAACAATAATACTCCACTTCCACTGGCAGAGATTCCGGTCGTTGACCTCTCTCAACTTTCATTGCCGTCTGCCGGCGAGGGTCCGTTGAACGACCTCCGTTTGGCTCTTAGTACTTGGGGATGCTTTCAGGTGAGCTTTCATGAACCTCAACACTGCCCTTTTCATATCAACTTTATTTTTAATTCTATTTTCTTCTAATTTTCTGCTTCAAACTTTTAATTTTACATTTCGATTTTTTTTAAAAATATATTTGAGTTTTTAGCTAAATTTTGAGAGGAAAGATTAGTAAATGGAGACAATTATTTTTAAGTTTCAAAACTTATTATTAATATTATGTTTGTGGTTTTTAAAAGATGGGATAATATAAAGAAATACATTATTAGATATACTTTTGTTTATTTGCTTGTGTCCAACATTATTGATGACACATATCTGTTTGTTTTTTTGTATGTTAATTCTATATATTTTTAGACAAAAGTATTGAATGATCAACAATATACAATTGCATAACACTTTTTTCATATTATAAACGTATGACTAGTATAGAGGGTAATCAGATATTAATTTACTTTTACATTTTTTATTTTTACAATTAAAAAAATATAGTGACATATACTCTATTATTATAAATGTTTTTTTTGCAAACTCCCTACTTTTTTGGTTGTATTTACAAATCGATTATGGTACAATTAGTCTTACCTATACTTATGTAACATCAAGAATATATATTTATATATATATATATATATGGAATGTTTGGCAACTAATTATATCTCCATTTTCTAACCATTTGGATTTTTTATTTTTATTTTTACAATTAAATCATTTTCTTGTAATTATTTAAATCTTTCTTGAATTTTTAGCAAAATTCAAAAATAAAATAATATTGACAATAATAAGGAATCCTTTGGTTTTCAAATTTTTATTTGATTTTTTAAAAATATTAATTTAAAACGTAGATTACAGTACAAACTATTTAAACATGGAAATAGTATTCATGTGCTTAATTAAAAATTAAAAATTAAAAAAAAAAAAACTTAAAAAGAAAAACCAACTATCCCAATATTTCCAAAAATGAGCTCTAATTCGAAATAGTAAGTTATATTAAGAATTCCTTTTTTTTTTCAAGAAATGAGAAACCATAGTATGTAGATATGAATTATAGTTTTTTCTTAAAAAATTGAAATAAAATAGTAATGGCTAAATGGTCATGAAACGGAGCAAAAGGGAAAGAGGAGTGATTGTTGTAAATTAATTTAGATTAACTAATTTGAGAGTGTGGTTTCAGGCTATTAATCACAGCATTTCAAGTTCATTTTTGGAGAAGATGAGAAAAATAAGTGAGCAATTTTTCTCATTGCCCATTGAAGAGAAGATGAGATATGGAAGAGAAGTTGATGGAATGGAAGGATATGGGAATGATTTAATTCTTTCAGAACAACAAATTCTAGATTGGTCTGATCGTTTATATTTCGTGACAAATCCTGAAGATGAAAGACGTCTCGAGCTTTGGCCTTTAAATCCTCCATCTTTCAGGTTAGTTTCAACGCTAATCTTTCATATATCTAAATCAGTTCAACATTCTCAAAAATTGTCACTACAAGAATGAAAACCTTTCTCGACGCAAAAATACGTCTAAAAAAACACAAAATGCGTCGGAGAAAGTATTTCCAACATCCATATGCAACGTCGGCTTGAACGTCGGAGAAACAACGTTGGGGACACCTTCCCCGGCACGTGCGACGCGAACGCCAGTGTAATTTTTACCGATGCATAA ATGGCACAAAATTCTCAGAACACACAAACACAAACACTCCAACAACAACTTCTCATCAACGGCGGCCACACGCCGGAAAGTTATATTTACAAAGGCGGCTACCACGGCGGAGGTTCCAACAATAATACTCCACTTCCACTGGCAGAGATTCCGGTCGTTGACCTCTCTCAACTTTCATTGCCGTCTGCCGGCGAGGGTCCGTTGAACGACCTCCGTTTGGCTCTTAGTACTTGGGGATGCTTTCAGGCTATTAATCACAGCATTTCAAGTTCATTTTTGGAGAAGATGAGAAAAATAAGTGAGCAATTTTTCTCATTGCCCATTGAAGAGAAGATGAGATATGGAAGAGAAGTTGATGGAATGGAAGGATATGGGAATGATTTAATTCTTTCAGAACAACAAATTCTAGATTGGTCTGATCGTTTATATTTCGTGACAAATCCTGAAGATGAAAGACGTCTCGAGCTTTGGCCTTTAAATCCTCCATCTTTCAGAAACAACGTTGGGGACACCTTCCCCGGCACGTGCGACGCGAACGCCAGTGTAATTTTTACCGATGCATAA ATGGCACAAAATTCTCAGAACACACAAACACAAACACTCCAACAACAACTTCTCATCAACGGCGGCCACACGCCGGAAAGTTATATTTACAAAGGCGGCTACCACGGCGGAGGTTCCAACAATAATACTCCACTTCCACTGGCAGAGATTCCGGTCGTTGACCTCTCTCAACTTTCATTGCCGTCTGCCGGCGAGGGTCCGTTGAACGACCTCCGTTTGGCTCTTAGTACTTGGGGATGCTTTCAGGCTATTAATCACAGCATTTCAAGTTCATTTTTGGAGAAGATGAGAAAAATAAGTGAGCAATTTTTCTCATTGCCCATTGAAGAGAAGATGAGATATGGAAGAGAAGTTGATGGAATGGAAGGATATGGGAATGATTTAATTCTTTCAGAACAACAAATTCTAGATTGGTCTGATCGTTTATATTTCGTGACAAATCCTGAAGATGAAAGACGTCTCGAGCTTTGGCCTTTAAATCCTCCATCTTTCAGAAACAACGTTGGGGACACCTTCCCCGGCACGTGCGACGCGAACGCCAGTGTAATTTTTACCGATGCATAA
BLAST of CSPI01G17050 vs. Swiss-Prot
Match: NCS1_COPJA (S-norcoclaurine synthase 1 OS=Coptis japonica GN=NCS1 PE=1 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22 Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 1
BLAST of CSPI01G17050 vs. Swiss-Prot
Match: SRG1_ARATH (Protein SRG1 OS=Arabidopsis thaliana GN=SRG1 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 2.7e-20 Identity = 44/120 (36.67%), Postives = 72/120 (60.00%), Query Frame = 1
BLAST of CSPI01G17050 vs. Swiss-Prot
Match: DIOX3_PAPSO (Codeine O-demethylase OS=Papaver somniferum GN=CODM PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 7.5e-15 Identity = 41/121 (33.88%), Postives = 66/121 (54.55%), Query Frame = 1
BLAST of CSPI01G17050 vs. Swiss-Prot
Match: LDOX_ARATH (Leucoanthocyanidin dioxygenase OS=Arabidopsis thaliana GN=LDOX PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 9.8e-15 Identity = 37/120 (30.83%), Postives = 64/120 (53.33%), Query Frame = 1
BLAST of CSPI01G17050 vs. Swiss-Prot
Match: DIOX1_PAPSO (Thebaine 6-O-demethylase OS=Papaver somniferum GN=T6ODM PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14 Identity = 45/140 (32.14%), Postives = 70/140 (50.00%), Query Frame = 1
BLAST of CSPI01G17050 vs. TrEMBL
Match: A0A0A0LWH8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G263960 PE=4 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 8.7e-87 Identity = 159/164 (96.95%), Postives = 159/164 (96.95%), Query Frame = 1
BLAST of CSPI01G17050 vs. TrEMBL
Match: A0A0A0LW96_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G212830 PE=3 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 4.5e-51 Identity = 98/111 (88.29%), Postives = 103/111 (92.79%), Query Frame = 1
BLAST of CSPI01G17050 vs. TrEMBL
Match: A0A067JH25_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00345 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 8.0e-40 Identity = 81/151 (53.64%), Postives = 106/151 (70.20%), Query Frame = 1
BLAST of CSPI01G17050 vs. TrEMBL
Match: A0A067KLK8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10453 PE=4 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.8e-39 Identity = 80/151 (52.98%), Postives = 106/151 (70.20%), Query Frame = 1
BLAST of CSPI01G17050 vs. TrEMBL
Match: U7E1C4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0025s00430g PE=4 SV=1) HSP 1 Score: 170.2 bits (430), Expect = 2.3e-39 Identity = 78/154 (50.65%), Postives = 105/154 (68.18%), Query Frame = 1
BLAST of CSPI01G17050 vs. TAIR10
Match: AT5G20550.1 (AT5G20550.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 142.5 bits (358), Expect = 2.6e-34 Identity = 68/155 (43.87%), Postives = 98/155 (63.23%), Query Frame = 1
BLAST of CSPI01G17050 vs. TAIR10
Match: AT5G20400.1 (AT5G20400.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 141.0 bits (354), Expect = 7.7e-34 Identity = 68/155 (43.87%), Postives = 99/155 (63.87%), Query Frame = 1
BLAST of CSPI01G17050 vs. TAIR10
Match: AT5G54000.1 (AT5G54000.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 141.0 bits (354), Expect = 7.7e-34 Identity = 68/156 (43.59%), Postives = 99/156 (63.46%), Query Frame = 1
BLAST of CSPI01G17050 vs. TAIR10
Match: AT1G49390.1 (AT1G49390.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 136.0 bits (341), Expect = 2.5e-32 Identity = 66/157 (42.04%), Postives = 97/157 (61.78%), Query Frame = 1
BLAST of CSPI01G17050 vs. TAIR10
Match: AT1G78550.1 (AT1G78550.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 103.2 bits (256), Expect = 1.8e-22 Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 1
BLAST of CSPI01G17050 vs. NCBI nr
Match: gi|778660153|ref|XP_011655698.1| (PREDICTED: protein SRG1-like [Cucumis sativus]) HSP 1 Score: 330.9 bits (847), Expect = 1.5e-87 Identity = 160/170 (94.12%), Postives = 163/170 (95.88%), Query Frame = 1
BLAST of CSPI01G17050 vs. NCBI nr
Match: gi|700210096|gb|KGN65192.1| (hypothetical protein Csa_1G263960 [Cucumis sativus]) HSP 1 Score: 327.8 bits (839), Expect = 1.3e-86 Identity = 159/164 (96.95%), Postives = 159/164 (96.95%), Query Frame = 1
BLAST of CSPI01G17050 vs. NCBI nr
Match: gi|778659909|ref|XP_011655280.1| (PREDICTED: protein SRG1-like [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.4e-85 Identity = 156/168 (92.86%), Postives = 161/168 (95.83%), Query Frame = 1
BLAST of CSPI01G17050 vs. NCBI nr
Match: gi|659131148|ref|XP_008465534.1| (PREDICTED: protein SRG1-like isoform X2 [Cucumis melo]) HSP 1 Score: 305.1 bits (780), Expect = 8.7e-80 Identity = 148/168 (88.10%), Postives = 153/168 (91.07%), Query Frame = 1
BLAST of CSPI01G17050 vs. NCBI nr
Match: gi|659131146|ref|XP_008465533.1| (PREDICTED: protein SRG1-like isoform X1 [Cucumis melo]) HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79 Identity = 148/166 (89.16%), Postives = 152/166 (91.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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