CSPI01G16520 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G16520
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTy1-copia retrotransposon protein
LocationChr1 : 12063884 .. 12068270 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGGTTTTCTCTAGCATGAGAGTTTGAGGAGGTTTATTAAAATTTATTTTAATAAATTATTTAATGTTTTTACCTTATATGACAATACATAACTGTCATGGATAAGTGTAATTCAAAAACAATGTTTTTTTCCAACCAAAACCGCAAATTTTGACGTTTTATGACATTTTTTTCTTCCATCATTTCAATTTGGGATGTAATGAACTGTGACAATATGTCATTTTTCTTGTAGTGGTAACCGTGCTTGTGGAAATAAAAGAAGTAATTTTTATTACTTATTCGATGAATATTTTTTTGTTCCTAGGAGGTATTTTTCCACTGTACACGTGTTCAATTCACATCCAATTTTTTGTGTGCGCTAATTACTACCAATTTCGTAAGACCCATAGATAAGCCTCGTAGTTAAGAGAAGAAGTAAAAATTTGACTAAATGTCCTAAAATAGACATTTTGGGTGGTCTACGTGAGAAGAGGTAGGTTACTATGCGAGAAAGGTTATGTAAGAAAACTTTTGAAATGTTAGGCGATTAGAGTTTTTTGCGAAATGGAACTTGGCGAGAAGAAACAAAGAAACTTCTTAGAAATTTCCTGAGTGTTTTAATGGGCCACGTGTAGAGTTTATGTTAAGCATGGTTAAGTTAAATCTTAAGATTATACATGTACCACTAAGAAGCAGGAGGTGACAACTTATCAAGAGCTTAAGTTCTGCCAAATTATTAGTCATGGTTGTTTTGAGAAGTTGAAGAGAAAAGTTTAAGTGTTGAGGTGCTGCTAAAGTGCCTATGCAAGAAGACTACGTGAGAAGCAGAAGAAGAGAAACCTTAGAAGTTTAAGTAGCTAAGTAGTATGAGTGTTTTCTTTAAAAATTTTATGTTAAAAGTTTTTGTTACAAGTTCTTATTTGGTTTGAGTTAATGATTTATATTCTAATTATGATTCGTAAAAAGAGATTCATACGAAAAGCTTATATGTTTTAAAGTATGTATTATGTAGCATGATTTATTATGAAATTGTATTCAAACCATTAGTTACTTCATTTTAATGAGCTAACTCTTATATGCACATAAATAGTCAATTGAGGCGATCATTAGGTGTACGAGGCTACATGGTGAATTAAGGCGACACAATGTATAGAAGATGTGCATTGCACTTCGGCCTAAGCAACAAAGACGAATCTGTATATTTTTGGATGTTGTTGTTACTGTAGTCTAAATGTGAAGTAATGAGATTGAGCGTAGAGAATGATTCGGGATACTTGGTGAAAAGAATGTTGATAACCAATGTGTGTTTATGCGAGATGAAACATTTGTACGCAATGTTATAATATATGAAAAGATGAATTTATGTGATTTGATATGTTTGGAGAAATGATGTTTACAAAAAGGTATTTTGCAAAAAGGTCTCACTGAGTCTTGTAGACTTACGTTTTTAAATTTCATCTTCCAGAAATCAGACGTTAAGGCCAAGTAAAGAAGAAGTGAAAGGTTTGCTAGAAGAGAAAAGCTGTCAGGCGTTTTACTTTCTAGGCTTCAGAGTTTTACTTTTGTCATTTATATTAAGTATTGTGGAACGCCTTATTTATTAAAGTTAATAAAAGTTTTAGTTTGGTTTACTTGTTTTATGTTAAGCTGTTTTATCGCTTAAAGTGTGATTGTAGTTGAAGTTACAAAAAAGAAGCCAGGCGATTAAGCAAAGCTTAAGGACCTCAAGATTTATGTGTTTTAATGTTTAACACTTCAAGATACTCAAGTCACACCACGTCTCGCAAGACAATTTAGTAGGTCTATGGGACGGAGTGTGAAATGTTTGCTCGAACGTCCATTGGTTACCGACGGTTTTCGTTCTGCACGCTCTTTAGAGTTCCTCTCCTATAAATTGAACGCAATTCGTCATTTATTTCATCATTAAAAAAAAGATTCTCTCTTCCATCTGAATTATCTCCCTCTTCTCCACTCACTTGAGTTTTGAGCTTCCAAGGATTTCTATTTCTATTCCTTGTTGTGGCGAGTGCACGTTACAATAGAAAAGTTGTGTTAACCTTGGGTAGTAACCAACATCACGATTAACACCCCGATCAGTTGTAATTGCTTTCAGGTCAGTGGTTCATCACGACACAACAATTCTACAGTGTTTAACATTCTGATATATATATTTATACATTCTAAAAGTAATTATTCCTCAATGTCGATCAAGCCCTTCAACAAAGTTCCACCATTTCTGTTCAAACTCGAGCCACTTGATGGAACAAATTACCACCGAAGGTCCAAAAAATTATCGAACTTTTTTTAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGTACGTAAAGGACAATAAGACAGTTCATCGGCATCTGTTGAACCATATGTCATATCCAATGTTTGACTTGTTCGTGGCTAAAAAGTCTTTCCAGGATATCTGAAACATTTTAGAATCTCAATATGGTGGAGATGATGCAGGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGTCAAAAGGCAGAATGAGAAAAACTCTTAAAAGAAGGGACAATTTAAGGGTACTAGAAAAAATTGCGAAGAAGAAGAAGAAGTTGATCTGTTATATCTGTGGAAAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGTCAACTTGATTGAAAATAAAATTGACTAGATATTTCTCGATACTGGAGCTTCAAGAAACTTATGCACCAACTGAGAACTTCTCCATGACTACGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTTATTTTGAAATTAACTTCTAAAAAAACTTTATCTTTGAGTAATATTTTGTATGTCCCTTGCCTACGTAAAAACTTGGTGTCTGGGAGTCTGTTGAATTAGGTGGGTCTTAAGATTGTATTGAAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTAAACTAGGACATGTAAATTTTGCATCAATTAAGAAGCTTAAGAATTCAAGATTAATTAATGCATCTAAATTACATGAAATTGGTAAAGGCCCTGTTTGTGTAGAAAGTAAATACTTGAAGAAACCTATCAAACCAGTTGTATCTAGAAGTACCTGAATTATTAGAACTAATTCACTCTGATCTAGCTGATTTAAAAAACACTACAAGTAGATGTGAAAAAAACTATTATATATCCTTTGTTGACGACTTCTCTAGATTTACTAAGATTTATTTTATAAAAACAAAAGATGAAGCTAGTAGCATGCTTTTTTTAAAAAATTTAAAGCAAAAACTGAAATTAATTAGTTAGGTAAAAGGATAAAAATATTATGATCAAATAGATGTAGTGAATATAGTGATAAAACTCTTAAAAAAATTTGTGAATCAAATGGTATTATTCATGAATTTACTACTCCTTACTCACCACGACAAAATGGTATAACATAACAGGAAAATAGAACCCTTAAGAAAATGATGAATGTCATGTTATTAAGCTCTAGACTATCTAATAACATGTGGGGAAAATTTGTGTTGTTTGCTTGCTTTGTTCTTAACAAGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA

mRNA sequence

ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA

Coding sequence (CDS)

ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA
Homology
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BLAST of CSPI01G16520 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+YRN+LKHKKKD K+ +LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKL 262
           KQE+                                 HKSYQCNQRKGRP+Q   PQA L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANL 312

Query: 263 AKQDDKVKAAVV-------------------------------EDTTDGECVFMGNSNVE 290
           A+QD ++ AA+V                               EDT DGECVFMGNS   
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATA 372

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5B994_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 75/285 (26.32%), Postives = 124/285 (43.51%), Query Frame = 1 

Query: 77  KKVSTIDSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVL 136
           KK  T D+   KK    K +  +M ++K +  Q+ E + ++  I  E M + +  Q   +
Sbjct: 107 KKYKTEDAGM-KKFIVGKFLDFKMIDSKTVRSQVQELQVILHEIHSEGMSLNDSFQVAAV 166

Query: 137 LEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSST 196
           +EKLPPL  +++NYLKHK+K+  +++LI R+R +E N   +K  + ++    AN+  S+ 
Sbjct: 167 IEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKFEKKGNNSME-AKANMNLSAV 226

Query: 197 VNRDMYKQEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVEDTTDGECVFMGNSN 256
           V+            +CN         +   A      +K   +  +     E +FMG S+
Sbjct: 227 VS------------ECNIVGNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGYSS 286

Query: 257 VEEYLGKEKV------------------------------------------TKLSSPKN 314
             +  G+ KV                                           K    KN
Sbjct: 287 SSKVEGRGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFVSDKFVLTKN 346

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037249 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.7e-09
Identity = 65/289 (22.49%), Postives = 126/289 (43.60%), Query Frame = 1 

Query: 74  DHMKKVSTIDSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQA 133
           + ++K    ++   KK    + +  +M ++K +  ++ E + ++  +  E M++ E  Q 
Sbjct: 16  EFLEKKYKTENAGMKKFIVGRFLDYKMVDSKTVTSEVQELQIILHELHAEKMELSESFQV 75

Query: 134 NVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVY 193
             ++EKLPP   +++N LKHK+K+  ++ LI R++ +E N + +K    +      NLV 
Sbjct: 76  TTIVEKLPPSWKDFKNSLKHKRKEMGLEDLIVRLKIEEDNCVSEKKVGKHPMESKVNLVE 135

Query: 194 SSTVNR----------------DMYKQEEHKSYQCNQRK--GRPNQGLVPQAKLAKQDDK 253
                +                + +       + C +R      NQ +V   K+      
Sbjct: 136 PKANKKIKHFGEGPTNMVDNLNEWWVDTGATRHVCGERNMFSSTNQWVVGIGKVVLNMTS 195

Query: 254 VKAAVVEDTTDGECVFMGNSNVEEYLGKEKVTKLSSPKNEEFVSKGYLSNGLFVFNNVSM 313
            K  V+ D        +  S++ + L   +  K    K   +V KG+++NGLF  N +++
Sbjct: 196 GKELVLTDV-------LHVSDIRKNLLVFEPDKFVFMKIGMYVGKGFMTNGLFNMNVMTV 255

Query: 314 -----NANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIRSNYFLLED 340
                N  VS+S Y++ES   WH  L      +L+ L  +   +F   D
Sbjct: 256 KHDFNNNKVSTSVYLIESFTFWHNRLGHVNNKTLKMLINMNLLHFFSID 297

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019364 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-09
Identity = 63/244 (25.82%), Postives = 112/244 (45.90%), Query Frame = 1 

Query: 88  KKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNY 147
           KK    K +  +M ++K +  Q+ E + ++  +  E M++ E  Q   ++EKLPP   ++
Sbjct: 85  KKFIVGKFLDYKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLPPSWKDF 144

Query: 148 RNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLV------------YSS 207
           +NYLKHK K+  ++ LI R++ +E N + +K    +     ANLV               
Sbjct: 145 KNYLKHKHKEMGLEDLIVRLKIEEDNHVFEKKVGKHPMESKANLVEPKANKKRKHFGEGP 204

Query: 208 TVNRDMYKQEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVEDTTDGECVFMGNS 267
           +  ++ YK+   K Y CN++          Q   AK     +  V+     G+ +  G+ 
Sbjct: 205 SQGKNKYKKFARKCYICNKQ---------VQGHSAKDCHLKEQNVLHVPDIGKNLVSGSM 264

Query: 268 -NVEEYLGKEKVTKLSSPKNEEFVSKGYLSNGLFVFNNVSM-----NANVSSSAYIVESV 314
            +   +    +  K    KN  +V  GY++N LF  N +++     N   S+  Y++ES 
Sbjct: 265 LSKNGFKLVFESNKFVFMKNGMYVGNGYMTNDLFKMNVMTVKRDFNNNKASTFVYLIESF 319

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A0A087HBT4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G263600 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           M +++P++EQ+ E  NL+  I  E M++CE  Q   ++EKLPP   +++NYLK K+K   
Sbjct: 1   MVDSRPLMEQVDEVHNLLHEIHAERMRLCETYQVACMIEKLPPRFIDFKNYLKLKRKWMS 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQEEHKSYQCNQRKGRP 219
           ++KL+ R+R + TN +  + AS      NANL    T  +  ++ +       NQ KG+ 
Sbjct: 61  MEKLLMRLRIESTNRMNLEAASAQNRENNANLAEHQTAEKGKWQNKG------NQDKGKG 115

Query: 220 N 221
           N
Sbjct: 121 N 115

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659071504|ref|XP_008460187.1| (PREDICTED: uncharacterized protein LOC103499069 [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 135/291 (46.39%), Postives = 168/291 (57.73%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MT++K +VEQIHEYENLV  +L + MK+CEILQ NVLLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTDDKRVVEQIHEYENLVANVLSKGMKICEILQENVLLEKFPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQEE-HKSYQCNQ---- 219
           +Q+LI  MRT+E N LKDKLAS NLN VNANLV S  VNR++ KQE+ HK     +    
Sbjct: 61  LQELISHMRTEEANKLKDKLASQNLNSVNANLVESFIVNRNITKQEKGHKGKNSEKRQFK 120

Query: 220 -----------RKGRPNQGLVPQAKLAKQDDKVKAAVV---------------------- 279
                      RKGRP+Q   PQA LA+QD ++ AA+V                      
Sbjct: 121 TLGGQIKKKKLRKGRPSQKPTPQANLAEQDSEIIAAIVKANLIENKTDWILDTRASRHFC 180

Query: 280 ---------EDTTDGECVFMGNSNVEEYLGKEKV------------TKLSSPKNEEFVSK 332
                    EDT DGE       +++E L    +             K+   KN +FV K
Sbjct: 181 TNRELLHDYEDTADGESCSWKTQSLQENLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGK 240

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+YRN+LKHKKKD K+ +LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKL 262
           KQE+                                 HKSYQCNQRKGRP+Q   PQA L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANL 312

Query: 263 AKQDDKVKAAVV-------------------------------EDTTDGECVFMGNSNVE 290
           A+QD ++ AA+V                               EDT DGECVFMGNS   
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATA 372

[Close]
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659123904|ref|XP_008461895.1| (PREDICTED: uncharacterized protein LOC103500390 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 5.9e-42
Identity = 125/255 (49.02%), Postives = 143/255 (56.08%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTDDKPVVEQIHEYENLVGNVLSEGMKMCEILQANVLLEKSPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYK---------------- 219
           +Q+LI  MRT+E N LKD LAS NLN VNANLV SS VN D  K                
Sbjct: 61  LQELISHMRTEEANRLKDNLASKNLNSVNANLVKSSIVNSDRTKHDKEHKGKNSEKRQFK 120

Query: 220 -----------------QEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVE---- 279
                            +E HKSYQCNQRKGRPNQ   PQA LA+QD+++ AA+VE    
Sbjct: 121 APRRQIKKKKLVCYVCGKEGHKSYQCNQRKGRPNQKPTPQANLAEQDNEIIAAIVEANLI 180

Query: 280 --------DTT-------------------DGECVFMGNSNVEEYLGKEKV-TKLSSPKN 290
                   DT                    D E VFMGNS     +GK KV  KL+S K 
Sbjct: 181 ENKTNWILDTGASRHFCTNLELLHDYEDTTDEEYVFMGNSATARVIGKGKVILKLTSGKT 240

[Close]
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659093718|ref|XP_008447680.1| (PREDICTED: uncharacterized protein LOC103490092 [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 4.7e-39
Identity = 100/176 (56.82%), Postives = 113/176 (64.20%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MTN+KP  EQIHEYENLV  +L E MKMCEILQAN+LLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTNDKPFFEQIHEYENLVANVLSEGMKMCEILQANILLEKFPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQ--------------- 219
           +Q+LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  KQ               
Sbjct: 61  LQELIIHMRTEEANRLKDKLASKNLNSVNANLVESSIVNRDRTKQKKWHKGKNLEKIQFK 120

Query: 220 ------------------EEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVE 243
                             E  K YQCNQRKGRP+Q   PQA LA+QD ++  A+VE
Sbjct: 121 ALGGQIKKKKLVCYVCGKEGQKPYQCNQRKGRPSQKPTPQANLAEQDSEIIVAIVE 176

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 6.1e-39
Identity = 119/248 (47.98%), Postives = 142/248 (57.26%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  ++ E MKM EILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVMSEGMKMYEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+Y N+LKHKKKD K+Q+LI  M T+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYCNHLKHKKKDLKLQELISHMGTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE-HKSYQCNQRKGRPNQGLV--------PQAKLAKQDDKVKAAVV------------ 262
           KQE+ HK     +R+ +   G +        PQA LA+QD ++ AA+V            
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLKPTPQANLAEQDSEIIAAIVEANLIENKTDWI 312

Query: 263 -------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSSPKNEEFVSKG 290
                              EDT DGECVFMGNS     +GK  V  KL+S K        
Sbjct: 313 LDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGTVILKLTSGKTLS----- 372

The following BLAST results are available for this feature:
BLAST of CSPI01G16520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G16520 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBG5_CUCME1.1e-4748.90Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5B994_VITVI1.4e-1026.32Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1[more]
A5BQD5_VITVI2.7e-0922.49Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037249 PE=4 SV=1[more]
A5BQ76_VITVI6.0e-0925.82Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019364 PE=4 SV=1[more]
A0A087HBT4_ARAAL3.9e-0834.71Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G263600 PE=4 SV=1[more]
BLAST of CSPI01G16520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G16520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071504|ref|XP_008460187.1|1.1e-5146.39PREDICTED: uncharacterized protein LOC103499069 [Cucumis melo][more]
gi|307135946|gb|ADN33807.1|1.6e-4748.90ty1-copia retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659123904|ref|XP_008461895.1|5.9e-4249.02PREDICTED: uncharacterized protein LOC103500390 [Cucumis melo][more]
gi|659093718|ref|XP_008447680.1|4.7e-3956.82PREDICTED: uncharacterized protein LOC103490092 [Cucumis melo][more]
gi|659102488|ref|XP_008452160.1|6.1e-3947.98PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G16520.1CSPI01G16520.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G16520Cucurbita moschata (Rifu)cmocpiB044
CSPI01G16520Cucurbita moschata (Rifu)cmocpiB081
CSPI01G16520Cucumber (Chinese Long) v2cpicuB000
CSPI01G16520Melon (DHL92) v3.5.1cpimeB048
CSPI01G16520Watermelon (Charleston Gray)cpiwcgB086
CSPI01G16520Watermelon (97103) v1cpiwmB102
CSPI01G16520Cucurbita pepo (Zucchini)cpecpiB365
CSPI01G16520Cucurbita pepo (Zucchini)cpecpiB660
CSPI01G16520Bottle gourd (USVL1VR-Ls)cpilsiB074
CSPI01G16520Melon (DHL92) v3.6.1cpimedB042
CSPI01G16520Cucumber (Gy14) v2cgybcpiB008
CSPI01G16520Silver-seed gourdcarcpiB0141
CSPI01G16520Cucumber (Chinese Long) v3cpicucB011
CSPI01G16520Watermelon (97103) v2cpiwmbB082
CSPI01G16520Wax gourdcpiwgoB085
CSPI01G16520Cucumber (Gy14) v1cgycpiB373
CSPI01G16520Cucurbita maxima (Rimu)cmacpiB053
CSPI01G16520Cucurbita maxima (Rimu)cmacpiB089