CSPI01G16520 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGGTTTTCTCTAGCATGAGAGTTTGAGGAGGTTTATTAAAATTTATTTTAATAAATTATTTAATGTTTTTACCTTATATGACAATACATAACTGTCATGGATAAGTGTAATTCAAAAACAATGTTTTTTTCCAACCAAAACCGCAAATTTTGACGTTTTATGACATTTTTTTCTTCCATCATTTCAATTTGGGATGTAATGAACTGTGACAATATGTCATTTTTCTTGTAGTGGTAACCGTGCTTGTGGAAATAAAAGAAGTAATTTTTATTACTTATTCGATGAATATTTTTTTGTTCCTAGGAGGTATTTTTCCACTGTACACGTGTTCAATTCACATCCAATTTTTTGTGTGCGCTAATTACTACCAATTTCGTAAGACCCATAGATAAGCCTCGTAGTTAAGAGAAGAAGTAAAAATTTGACTAAATGTCCTAAAATAGACATTTTGGGTGGTCTACGTGAGAAGAGGTAGGTTACTATGCGAGAAAGGTTATGTAAGAAAACTTTTGAAATGTTAGGCGATTAGAGTTTTTTGCGAAATGGAACTTGGCGAGAAGAAACAAAGAAACTTCTTAGAAATTTCCTGAGTGTTTTAATGGGCCACGTGTAGAGTTTATGTTAAGCATGGTTAAGTTAAATCTTAAGATTATACATGTACCACTAAGAAGCAGGAGGTGACAACTTATCAAGAGCTTAAGTTCTGCCAAATTATTAGTCATGGTTGTTTTGAGAAGTTGAAGAGAAAAGTTTAAGTGTTGAGGTGCTGCTAAAGTGCCTATGCAAGAAGACTACGTGAGAAGCAGAAGAAGAGAAACCTTAGAAGTTTAAGTAGCTAAGTAGTATGAGTGTTTTCTTTAAAAATTTTATGTTAAAAGTTTTTGTTACAAGTTCTTATTTGGTTTGAGTTAATGATTTATATTCTAATTATGATTCGTAAAAAGAGATTCATACGAAAAGCTTATATGTTTTAAAGTATGTATTATGTAGCATGATTTATTATGAAATTGTATTCAAACCATTAGTTACTTCATTTTAATGAGCTAACTCTTATATGCACATAAATAGTCAATTGAGGCGATCATTAGGTGTACGAGGCTACATGGTGAATTAAGGCGACACAATGTATAGAAGATGTGCATTGCACTTCGGCCTAAGCAACAAAGACGAATCTGTATATTTTTGGATGTTGTTGTTACTGTAGTCTAAATGTGAAGTAATGAGATTGAGCGTAGAGAATGATTCGGGATACTTGGTGAAAAGAATGTTGATAACCAATGTGTGTTTATGCGAGATGAAACATTTGTACGCAATGTTATAATATATGAAAAGATGAATTTATGTGATTTGATATGTTTGGAGAAATGATGTTTACAAAAAGGTATTTTGCAAAAAGGTCTCACTGAGTCTTGTAGACTTACGTTTTTAAATTTCATCTTCCAGAAATCAGACGTTAAGGCCAAGTAAAGAAGAAGTGAAAGGTTTGCTAGAAGAGAAAAGCTGTCAGGCGTTTTACTTTCTAGGCTTCAGAGTTTTACTTTTGTCATTTATATTAAGTATTGTGGAACGCCTTATTTATTAAAGTTAATAAAAGTTTTAGTTTGGTTTACTTGTTTTATGTTAAGCTGTTTTATCGCTTAAAGTGTGATTGTAGTTGAAGTTACAAAAAAGAAGCCAGGCGATTAAGCAAAGCTTAAGGACCTCAAGATTTATGTGTTTTAATGTTTAACACTTCAAGATACTCAAGTCACACCACGTCTCGCAAGACAATTTAGTAGGTCTATGGGACGGAGTGTGAAATGTTTGCTCGAACGTCCATTGGTTACCGACGGTTTTCGTTCTGCACGCTCTTTAGAGTTCCTCTCCTATAAATTGAACGCAATTCGTCATTTATTTCATCATTAAAAAAAAGATTCTCTCTTCCATCTGAATTATCTCCCTCTTCTCCACTCACTTGAGTTTTGAGCTTCCAAGGATTTCTATTTCTATTCCTTGTTGTGGCGAGTGCACGTTACAATAGAAAAGTTGTGTTAACCTTGGGTAGTAACCAACATCACGATTAACACCCCGATCAGTTGTAATTGCTTTCAGGTCAGTGGTTCATCACGACACAACAATTCTACAGTGTTTAACATTCTGATATATATATTTATACATTCTAAAAGTAATTATTCCTCAATGTCGATCAAGCCCTTCAACAAAGTTCCACCATTTCTGTTCAAACTCGAGCCACTTGATGGAACAAATTACCACCGAAGGTCCAAAAAATTATCGAACTTTTTTTAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGTACGTAAAGGACAATAAGACAGTTCATCGGCATCTGTTGAACCATATGTCATATCCAATGTTTGACTTGTTCGTGGCTAAAAAGTCTTTCCAGGATATCTGAAACATTTTAGAATCTCAATATGGTGGAGATGATGCAGGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGTCAAAAGGCAGAATGAGAAAAACTCTTAAAAGAAGGGACAATTTAAGGGTACTAGAAAAAATTGCGAAGAAGAAGAAGAAGTTGATCTGTTATATCTGTGGAAAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGTCAACTTGATTGAAAATAAAATTGACTAGATATTTCTCGATACTGGAGCTTCAAGAAACTTATGCACCAACTGAGAACTTCTCCATGACTACGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTTATTTTGAAATTAACTTCTAAAAAAACTTTATCTTTGAGTAATATTTTGTATGTCCCTTGCCTACGTAAAAACTTGGTGTCTGGGAGTCTGTTGAATTAGGTGGGTCTTAAGATTGTATTGAAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTAAACTAGGACATGTAAATTTTGCATCAATTAAGAAGCTTAAGAATTCAAGATTAATTAATGCATCTAAATTACATGAAATTGGTAAAGGCCCTGTTTGTGTAGAAAGTAAATACTTGAAGAAACCTATCAAACCAGTTGTATCTAGAAGTACCTGAATTATTAGAACTAATTCACTCTGATCTAGCTGATTTAAAAAACACTACAAGTAGATGTGAAAAAAACTATTATATATCCTTTGTTGACGACTTCTCTAGATTTACTAAGATTTATTTTATAAAAACAAAAGATGAAGCTAGTAGCATGCTTTTTTTAAAAAATTTAAAGCAAAAACTGAAATTAATTAGTTAGGTAAAAGGATAAAAATATTATGATCAAATAGATGTAGTGAATATAGTGATAAAACTCTTAAAAAAATTTGTGAATCAAATGGTATTATTCATGAATTTACTACTCCTTACTCACCACGACAAAATGGTATAACATAACAGGAAAATAGAACCCTTAAGAAAATGATGAATGTCATGTTATTAAGCTCTAGACTATCTAATAACATGTGGGGAAAATTTGTGTTGTTTGCTTGCTTTGTTCTTAACAAGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA
BLAST of CSPI01G16520 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47 Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1
BLAST of CSPI01G16520 vs. TrEMBL
Match: A5B994_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 75/285 (26.32%), Postives = 124/285 (43.51%), Query Frame = 1
BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037249 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.7e-09 Identity = 65/289 (22.49%), Postives = 126/289 (43.60%), Query Frame = 1
BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019364 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 6.0e-09 Identity = 63/244 (25.82%), Postives = 112/244 (45.90%), Query Frame = 1
BLAST of CSPI01G16520 vs. TrEMBL
Match: A0A087HBT4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G263600 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08 Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 1
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659071504|ref|XP_008460187.1| (PREDICTED: uncharacterized protein LOC103499069 [Cucumis melo]) HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51 Identity = 135/291 (46.39%), Postives = 168/291 (57.73%), Query Frame = 1
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo]) HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47 Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659123904|ref|XP_008461895.1| (PREDICTED: uncharacterized protein LOC103500390 [Cucumis melo]) HSP 1 Score: 180.3 bits (456), Expect = 5.9e-42 Identity = 125/255 (49.02%), Postives = 143/255 (56.08%), Query Frame = 1
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659093718|ref|XP_008447680.1| (PREDICTED: uncharacterized protein LOC103490092 [Cucumis melo]) HSP 1 Score: 170.6 bits (431), Expect = 4.7e-39 Identity = 100/176 (56.82%), Postives = 113/176 (64.20%), Query Frame = 1
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo]) HSP 1 Score: 170.2 bits (430), Expect = 6.1e-39 Identity = 119/248 (47.98%), Postives = 142/248 (57.26%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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