CSPI01G16520 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G16520
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionTy1-copia retrotransposon protein
LocationChr1 : 12063884 .. 12068270 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGGTTTTCTCTAGCATGAGAGTTTGAGGAGGTTTATTAAAATTTATTTTAATAAATTATTTAATGTTTTTACCTTATATGACAATACATAACTGTCATGGATAAGTGTAATTCAAAAACAATGTTTTTTTCCAACCAAAACCGCAAATTTTGACGTTTTATGACATTTTTTTCTTCCATCATTTCAATTTGGGATGTAATGAACTGTGACAATATGTCATTTTTCTTGTAGTGGTAACCGTGCTTGTGGAAATAAAAGAAGTAATTTTTATTACTTATTCGATGAATATTTTTTTGTTCCTAGGAGGTATTTTTCCACTGTACACGTGTTCAATTCACATCCAATTTTTTGTGTGCGCTAATTACTACCAATTTCGTAAGACCCATAGATAAGCCTCGTAGTTAAGAGAAGAAGTAAAAATTTGACTAAATGTCCTAAAATAGACATTTTGGGTGGTCTACGTGAGAAGAGGTAGGTTACTATGCGAGAAAGGTTATGTAAGAAAACTTTTGAAATGTTAGGCGATTAGAGTTTTTTGCGAAATGGAACTTGGCGAGAAGAAACAAAGAAACTTCTTAGAAATTTCCTGAGTGTTTTAATGGGCCACGTGTAGAGTTTATGTTAAGCATGGTTAAGTTAAATCTTAAGATTATACATGTACCACTAAGAAGCAGGAGGTGACAACTTATCAAGAGCTTAAGTTCTGCCAAATTATTAGTCATGGTTGTTTTGAGAAGTTGAAGAGAAAAGTTTAAGTGTTGAGGTGCTGCTAAAGTGCCTATGCAAGAAGACTACGTGAGAAGCAGAAGAAGAGAAACCTTAGAAGTTTAAGTAGCTAAGTAGTATGAGTGTTTTCTTTAAAAATTTTATGTTAAAAGTTTTTGTTACAAGTTCTTATTTGGTTTGAGTTAATGATTTATATTCTAATTATGATTCGTAAAAAGAGATTCATACGAAAAGCTTATATGTTTTAAAGTATGTATTATGTAGCATGATTTATTATGAAATTGTATTCAAACCATTAGTTACTTCATTTTAATGAGCTAACTCTTATATGCACATAAATAGTCAATTGAGGCGATCATTAGGTGTACGAGGCTACATGGTGAATTAAGGCGACACAATGTATAGAAGATGTGCATTGCACTTCGGCCTAAGCAACAAAGACGAATCTGTATATTTTTGGATGTTGTTGTTACTGTAGTCTAAATGTGAAGTAATGAGATTGAGCGTAGAGAATGATTCGGGATACTTGGTGAAAAGAATGTTGATAACCAATGTGTGTTTATGCGAGATGAAACATTTGTACGCAATGTTATAATATATGAAAAGATGAATTTATGTGATTTGATATGTTTGGAGAAATGATGTTTACAAAAAGGTATTTTGCAAAAAGGTCTCACTGAGTCTTGTAGACTTACGTTTTTAAATTTCATCTTCCAGAAATCAGACGTTAAGGCCAAGTAAAGAAGAAGTGAAAGGTTTGCTAGAAGAGAAAAGCTGTCAGGCGTTTTACTTTCTAGGCTTCAGAGTTTTACTTTTGTCATTTATATTAAGTATTGTGGAACGCCTTATTTATTAAAGTTAATAAAAGTTTTAGTTTGGTTTACTTGTTTTATGTTAAGCTGTTTTATCGCTTAAAGTGTGATTGTAGTTGAAGTTACAAAAAAGAAGCCAGGCGATTAAGCAAAGCTTAAGGACCTCAAGATTTATGTGTTTTAATGTTTAACACTTCAAGATACTCAAGTCACACCACGTCTCGCAAGACAATTTAGTAGGTCTATGGGACGGAGTGTGAAATGTTTGCTCGAACGTCCATTGGTTACCGACGGTTTTCGTTCTGCACGCTCTTTAGAGTTCCTCTCCTATAAATTGAACGCAATTCGTCATTTATTTCATCATTAAAAAAAAGATTCTCTCTTCCATCTGAATTATCTCCCTCTTCTCCACTCACTTGAGTTTTGAGCTTCCAAGGATTTCTATTTCTATTCCTTGTTGTGGCGAGTGCACGTTACAATAGAAAAGTTGTGTTAACCTTGGGTAGTAACCAACATCACGATTAACACCCCGATCAGTTGTAATTGCTTTCAGGTCAGTGGTTCATCACGACACAACAATTCTACAGTGTTTAACATTCTGATATATATATTTATACATTCTAAAAGTAATTATTCCTCAATGTCGATCAAGCCCTTCAACAAAGTTCCACCATTTCTGTTCAAACTCGAGCCACTTGATGGAACAAATTACCACCGAAGGTCCAAAAAATTATCGAACTTTTTTTAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGTACGTAAAGGACAATAAGACAGTTCATCGGCATCTGTTGAACCATATGTCATATCCAATGTTTGACTTGTTCGTGGCTAAAAAGTCTTTCCAGGATATCTGAAACATTTTAGAATCTCAATATGGTGGAGATGATGCAGGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGTCAAAAGGCAGAATGAGAAAAACTCTTAAAAGAAGGGACAATTTAAGGGTACTAGAAAAAATTGCGAAGAAGAAGAAGAAGTTGATCTGTTATATCTGTGGAAAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGTCAACTTGATTGAAAATAAAATTGACTAGATATTTCTCGATACTGGAGCTTCAAGAAACTTATGCACCAACTGAGAACTTCTCCATGACTACGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTTATTTTGAAATTAACTTCTAAAAAAACTTTATCTTTGAGTAATATTTTGTATGTCCCTTGCCTACGTAAAAACTTGGTGTCTGGGAGTCTGTTGAATTAGGTGGGTCTTAAGATTGTATTGAAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTAAACTAGGACATGTAAATTTTGCATCAATTAAGAAGCTTAAGAATTCAAGATTAATTAATGCATCTAAATTACATGAAATTGGTAAAGGCCCTGTTTGTGTAGAAAGTAAATACTTGAAGAAACCTATCAAACCAGTTGTATCTAGAAGTACCTGAATTATTAGAACTAATTCACTCTGATCTAGCTGATTTAAAAAACACTACAAGTAGATGTGAAAAAAACTATTATATATCCTTTGTTGACGACTTCTCTAGATTTACTAAGATTTATTTTATAAAAACAAAAGATGAAGCTAGTAGCATGCTTTTTTTAAAAAATTTAAAGCAAAAACTGAAATTAATTAGTTAGGTAAAAGGATAAAAATATTATGATCAAATAGATGTAGTGAATATAGTGATAAAACTCTTAAAAAAATTTGTGAATCAAATGGTATTATTCATGAATTTACTACTCCTTACTCACCACGACAAAATGGTATAACATAACAGGAAAATAGAACCCTTAAGAAAATGATGAATGTCATGTTATTAAGCTCTAGACTATCTAATAACATGTGGGGAAAATTTGTGTTGTTTGCTTGCTTTGTTCTTAACAAGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA

mRNA sequence

ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA

Coding sequence (CDS)

ATGTTTGGAGATGGTCGACGACGTTTACAGACAGGGTTGAGGGTGGAGTTTGATCCTCTGATGGTGGAAGGACAGACGACAACGTGTGGAGTCTTCTGTTTGCACAAGCAGTTGAAAGTCGACTATGTTCTTGTCCTTGATCCTTCATGTGATCCTCAAAAAATCATTTTTGTACCTTCTAATCCAAAATCATCCTTCGGTCTTCTTGTCATTGTAGTTGACCATATGAAGAAGGTATCCACAATCGATTCTGAGAAGGCAAAAAAAGTACCTTATTGGAAAGTAGTTGTAGTCCAGATGACAAACAACAAGCCTATTGTGGAACAAATACATGAATATGAAAACCTGGTGGAAACTATTCTACTTGAAGTAATGAAGATGTGTGAAATCCTCCAAGCGAATGTTTTACTAGAAAAACTTCCTCCTTTAGGGAACAACTACCGAAATTATTTGAAGCACAAAAAGAAGGATTGGAAAATTCAGAAATTGATCGACCGCATGCGCACAAAAGAAACCAATATACTAAAAGATAAGCTCGCCTCTACAAATCTAAATTTTGTTAATGCTAACTTAGTTTATTCTTCTACTGTTAACAGAGACATGTACAAGCAGGAAGAACATAAATCTTACCAATGCAATCAAAGGAAAGGGAGACCAAACCAGGGACTTGTACCTCAAGCTAAGCTTGCTAAACAAGATGACAAGGTCAAAGCTGCTGTTGTGGAGGACACTACAGATGGAGAATGTGTATTCATGGGAAACTCAAATGTTGAGGAGTACTTAGGAAAAGAGAAGGTGACAAAGTTGTCCTCACCAAAAAATGAAGAATTTGTCAGTAAAGGGTATTTGTCTAATGGTCTGTTTGTATTTAATAATGTTTCCATGAATGCAAATGTTTCAAGTTCTGCCTATATAGTTGAATCTGTTGATTTGTGGCATGGTTCCCTACAGAAAACTGGACAAAACTCCTTACGAACTTTGGAAAGAATACGCTCCAATTATTTCTTACTTGAGGATTTGGGGATGCTTGGCTAA
Homology
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BLAST of CSPI01G16520 vs. TrEMBL
Match: E5GBG5_CUCME (Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+YRN+LKHKKKD K+ +LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKL 262
           KQE+                                 HKSYQCNQRKGRP+Q   PQA L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANL 312

Query: 263 AKQDDKVKAAVV-------------------------------EDTTDGECVFMGNSNVE 290
           A+QD ++ AA+V                               EDT DGECVFMGNS   
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATA 372

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5B994_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 75/285 (26.32%), Postives = 124/285 (43.51%), Query Frame = 1 

Query: 77  KKVSTIDSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVL 136
           KK  T D+   KK    K +  +M ++K +  Q+ E + ++  I  E M + +  Q   +
Sbjct: 107 KKYKTEDAGM-KKFIVGKFLDFKMIDSKTVRSQVQELQVILHEIHSEGMSLNDSFQVAAV 166

Query: 137 LEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSST 196
           +EKLPPL  +++NYLKHK+K+  +++LI R+R +E N   +K  + ++    AN+  S+ 
Sbjct: 167 IEKLPPLWKDFKNYLKHKRKEMNLEELIVRLRIEEDNRKFEKKGNNSME-AKANMNLSAV 226

Query: 197 VNRDMYKQEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVEDTTDGECVFMGNSN 256
           V+            +CN         +   A      +K   +  +     E +FMG S+
Sbjct: 227 VS------------ECNIVGNTKEWWVDTGATRHICSNKWMFSTYKPVEQNEELFMGYSS 286

Query: 257 VEEYLGKEKV------------------------------------------TKLSSPKN 314
             +  G+ KV                                           K    KN
Sbjct: 287 SSKVEGRGKVILKMTSGKELTLNDVLHVPDIRKNLVSRSLLSKNGFKLVFVSDKFVLTKN 346

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQD5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037249 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.7e-09
Identity = 65/289 (22.49%), Postives = 126/289 (43.60%), Query Frame = 1 

Query: 74  DHMKKVSTIDSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQA 133
           + ++K    ++   KK    + +  +M ++K +  ++ E + ++  +  E M++ E  Q 
Sbjct: 16  EFLEKKYKTENAGMKKFIVGRFLDYKMVDSKTVTSEVQELQIILHELHAEKMELSESFQV 75

Query: 134 NVLLEKLPPLGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVY 193
             ++EKLPP   +++N LKHK+K+  ++ LI R++ +E N + +K    +      NLV 
Sbjct: 76  TTIVEKLPPSWKDFKNSLKHKRKEMGLEDLIVRLKIEEDNCVSEKKVGKHPMESKVNLVE 135

Query: 194 SSTVNR----------------DMYKQEEHKSYQCNQRK--GRPNQGLVPQAKLAKQDDK 253
                +                + +       + C +R      NQ +V   K+      
Sbjct: 136 PKANKKIKHFGEGPTNMVDNLNEWWVDTGATRHVCGERNMFSSTNQWVVGIGKVVLNMTS 195

Query: 254 VKAAVVEDTTDGECVFMGNSNVEEYLGKEKVTKLSSPKNEEFVSKGYLSNGLFVFNNVSM 313
            K  V+ D        +  S++ + L   +  K    K   +V KG+++NGLF  N +++
Sbjct: 196 GKELVLTDV-------LHVSDIRKNLLVFEPDKFVFMKIGMYVGKGFMTNGLFNMNVMTV 255

Query: 314 -----NANVSSSAYIVESVDLWHGSLQKTGQNSLRTLERIRSNYFLLED 340
                N  VS+S Y++ES   WH  L      +L+ L  +   +F   D
Sbjct: 256 KHDFNNNKVSTSVYLIESFTFWHNRLGHVNNKTLKMLINMNLLHFFSID 297

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A5BQ76_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019364 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 6.0e-09
Identity = 63/244 (25.82%), Postives = 112/244 (45.90%), Query Frame = 1 

Query: 88  KKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNY 147
           KK    K +  +M ++K +  Q+ E + ++  +  E M++ E  Q   ++EKLPP   ++
Sbjct: 85  KKFIVGKFLDYKMVDSKTVTSQVQELQIILHELHAEKMELSESFQVAAIVEKLPPSWKDF 144

Query: 148 RNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLV------------YSS 207
           +NYLKHK K+  ++ LI R++ +E N + +K    +     ANLV               
Sbjct: 145 KNYLKHKHKEMGLEDLIVRLKIEEDNHVFEKKVGKHPMESKANLVEPKANKKRKHFGEGP 204

Query: 208 TVNRDMYKQEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVEDTTDGECVFMGNS 267
           +  ++ YK+   K Y CN++          Q   AK     +  V+     G+ +  G+ 
Sbjct: 205 SQGKNKYKKFARKCYICNKQ---------VQGHSAKDCHLKEQNVLHVPDIGKNLVSGSM 264

Query: 268 -NVEEYLGKEKVTKLSSPKNEEFVSKGYLSNGLFVFNNVSM-----NANVSSSAYIVESV 314
            +   +    +  K    KN  +V  GY++N LF  N +++     N   S+  Y++ES 
Sbjct: 265 LSKNGFKLVFESNKFVFMKNGMYVGNGYMTNDLFKMNVMTVKRDFNNNKASTFVYLIESF 319

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BLAST of CSPI01G16520 vs. TrEMBL
Match: A0A087HBT4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G263600 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.9e-08
Identity = 42/121 (34.71%), Postives = 69/121 (57.02%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           M +++P++EQ+ E  NL+  I  E M++CE  Q   ++EKLPP   +++NYLK K+K   
Sbjct: 1   MVDSRPLMEQVDEVHNLLHEIHAERMRLCETYQVACMIEKLPPRFIDFKNYLKLKRKWMS 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQEEHKSYQCNQRKGRP 219
           ++KL+ R+R + TN +  + AS      NANL    T  +  ++ +       NQ KG+ 
Sbjct: 61  MEKLLMRLRIESTNRMNLEAASAQNRENNANLAEHQTAEKGKWQNKG------NQDKGKG 115

Query: 220 N 221
           N
Sbjct: 121 N 115

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659071504|ref|XP_008460187.1| (PREDICTED: uncharacterized protein LOC103499069 [Cucumis melo])

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-51
Identity = 135/291 (46.39%), Postives = 168/291 (57.73%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MT++K +VEQIHEYENLV  +L + MK+CEILQ NVLLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTDDKRVVEQIHEYENLVANVLSKGMKICEILQENVLLEKFPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQEE-HKSYQCNQ---- 219
           +Q+LI  MRT+E N LKDKLAS NLN VNANLV S  VNR++ KQE+ HK     +    
Sbjct: 61  LQELISHMRTEEANKLKDKLASQNLNSVNANLVESFIVNRNITKQEKGHKGKNSEKRQFK 120

Query: 220 -----------RKGRPNQGLVPQAKLAKQDDKVKAAVV---------------------- 279
                      RKGRP+Q   PQA LA+QD ++ AA+V                      
Sbjct: 121 TLGGQIKKKKLRKGRPSQKPTPQANLAEQDSEIIAAIVKANLIENKTDWILDTRASRHFC 180

Query: 280 ---------EDTTDGECVFMGNSNVEEYLGKEKV------------TKLSSPKNEEFVSK 332
                    EDT DGE       +++E L    +             K+   KN +FV K
Sbjct: 181 TNRELLHDYEDTADGESCSWKTQSLQENLVSGSLLNRVGLKIVLEGDKVVLTKNGDFVGK 240

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|307135946|gb|ADN33807.1| (ty1-copia retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 133/272 (48.90%), Postives = 152/272 (55.88%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVTNVLSEGMKMCEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+YRN+LKHKKKD K+ +LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYRNHLKHKKKDLKLHELISHMRTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE---------------------------------HKSYQCNQRKGRPNQGLVPQAKL 262
           KQE+                                 HKSYQCNQRKGRP+Q   PQA L
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLVCYVCRKEGHKSYQCNQRKGRPSQKPTPQANL 312

Query: 263 AKQDDKVKAAVV-------------------------------EDTTDGECVFMGNSNVE 290
           A+QD ++ AA+V                               EDT DGECVFMGNS   
Sbjct: 313 AEQDSEIIAAIVEANLIENKTDWILDTGASRHFCTNRELLHDYEDTVDGECVFMGNSATA 372

[Close]
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659123904|ref|XP_008461895.1| (PREDICTED: uncharacterized protein LOC103500390 [Cucumis melo])

HSP 1 Score: 180.3 bits (456), Expect = 5.9e-42
Identity = 125/255 (49.02%), Postives = 143/255 (56.08%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MT++KP+VEQIHEYENLV  +L E MKMCEILQANVLLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTDDKPVVEQIHEYENLVGNVLSEGMKMCEILQANVLLEKSPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYK---------------- 219
           +Q+LI  MRT+E N LKD LAS NLN VNANLV SS VN D  K                
Sbjct: 61  LQELISHMRTEEANRLKDNLASKNLNSVNANLVKSSIVNSDRTKHDKEHKGKNSEKRQFK 120

Query: 220 -----------------QEEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVE---- 279
                            +E HKSYQCNQRKGRPNQ   PQA LA+QD+++ AA+VE    
Sbjct: 121 APRRQIKKKKLVCYVCGKEGHKSYQCNQRKGRPNQKPTPQANLAEQDNEIIAAIVEANLI 180

Query: 280 --------DTT-------------------DGECVFMGNSNVEEYLGKEKV-TKLSSPKN 290
                   DT                    D E VFMGNS     +GK KV  KL+S K 
Sbjct: 181 ENKTNWILDTGASRHFCTNLELLHDYEDTTDEEYVFMGNSATARVIGKGKVILKLTSGKT 240

[Close]
BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659093718|ref|XP_008447680.1| (PREDICTED: uncharacterized protein LOC103490092 [Cucumis melo])

HSP 1 Score: 170.6 bits (431), Expect = 4.7e-39
Identity = 100/176 (56.82%), Postives = 113/176 (64.20%), Query Frame = 1 

Query: 100 MTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPPLGNNYRNYLKHKKKDWK 159
           MTN+KP  EQIHEYENLV  +L E MKMCEILQAN+LLEK PP  N+YRN+LKHKKKD K
Sbjct: 1   MTNDKPFFEQIHEYENLVANVLSEGMKMCEILQANILLEKFPPSWNDYRNHLKHKKKDLK 60

Query: 160 IQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMYKQ--------------- 219
           +Q+LI  MRT+E N LKDKLAS NLN VNANLV SS VNRD  KQ               
Sbjct: 61  LQELIIHMRTEEANRLKDKLASKNLNSVNANLVESSIVNRDRTKQKKWHKGKNLEKIQFK 120

Query: 220 ------------------EEHKSYQCNQRKGRPNQGLVPQAKLAKQDDKVKAAVVE 243
                             E  K YQCNQRKGRP+Q   PQA LA+QD ++  A+VE
Sbjct: 121 ALGGQIKKKKLVCYVCGKEGQKPYQCNQRKGRPSQKPTPQANLAEQDSEIIVAIVE 176

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BLAST of CSPI01G16520 vs. NCBI nr
Match: gi|659102488|ref|XP_008452160.1| (PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo])

HSP 1 Score: 170.2 bits (430), Expect = 6.1e-39
Identity = 119/248 (47.98%), Postives = 142/248 (57.26%), Query Frame = 1 

Query: 83  DSEKAKKVPYWKVVVVQMTNNKPIVEQIHEYENLVETILLEVMKMCEILQANVLLEKLPP 142
           D    KK    K +  QMT++KP+VEQIHEYENLV  ++ E MKM EILQANVLLEK PP
Sbjct: 133 DDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVMSEGMKMYEILQANVLLEKFPP 192

Query: 143 LGNNYRNYLKHKKKDWKIQKLIDRMRTKETNILKDKLASTNLNFVNANLVYSSTVNRDMY 202
             N+Y N+LKHKKKD K+Q+LI  M T+E N LKDKLAS NLN VNANLV SS VNRD  
Sbjct: 193 SWNDYCNHLKHKKKDLKLQELISHMGTEEANRLKDKLASQNLNSVNANLVESSFVNRDRT 252

Query: 203 KQEE-HKSYQCNQRKGRPNQGLV--------PQAKLAKQDDKVKAAVV------------ 262
           KQE+ HK     +R+ +   G +        PQA LA+QD ++ AA+V            
Sbjct: 253 KQEKGHKGKNSEKRQFKTTGGQIKKKKLKPTPQANLAEQDSEIIAAIVEANLIENKTDWI 312

Query: 263 -------------------EDTTDGECVFMGNSNVEEYLGKEKV-TKLSSPKNEEFVSKG 290
                              EDT DGECVFMGNS     +GK  V  KL+S K        
Sbjct: 313 LDTGASRHFCTNRELLHDYEDTADGECVFMGNSATAGVIGKGTVILKLTSGKTLS----- 372

The following BLAST results are available for this feature:
BLAST of CSPI01G16520 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G16520 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBG5_CUCME1.1e-4748.90Ty1-copia retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A5B994_VITVI1.4e-1026.32Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023328 PE=4 SV=1[more]
A5BQD5_VITVI2.7e-0922.49Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037249 PE=4 SV=1[more]
A5BQ76_VITVI6.0e-0925.82Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019364 PE=4 SV=1[more]
A0A087HBT4_ARAAL3.9e-0834.71Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G263600 PE=4 SV=1[more]
BLAST of CSPI01G16520 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G16520 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659071504|ref|XP_008460187.1|1.1e-5146.39PREDICTED: uncharacterized protein LOC103499069 [Cucumis melo][more]
gi|307135946|gb|ADN33807.1|1.6e-4748.90ty1-copia retrotransposon protein [Cucumis melo subsp. melo][more]
gi|659123904|ref|XP_008461895.1|5.9e-4249.02PREDICTED: uncharacterized protein LOC103500390 [Cucumis melo][more]
gi|659093718|ref|XP_008447680.1|4.7e-3956.82PREDICTED: uncharacterized protein LOC103490092 [Cucumis melo][more]
gi|659102488|ref|XP_008452160.1|6.1e-3947.98PREDICTED: uncharacterized protein LOC103493265 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G16520.1CSPI01G16520.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G16520Watermelon (97103) v2cpiwmbB082
CSPI01G16520Wax gourdcpiwgoB085
CSPI01G16520Cucumber (Gy14) v1cgycpiB373
CSPI01G16520Cucurbita maxima (Rimu)cmacpiB053
CSPI01G16520Cucurbita maxima (Rimu)cmacpiB089
CSPI01G16520Cucurbita moschata (Rifu)cmocpiB044
CSPI01G16520Cucurbita moschata (Rifu)cmocpiB081
CSPI01G16520Cucumber (Chinese Long) v2cpicuB000
CSPI01G16520Melon (DHL92) v3.5.1cpimeB048
CSPI01G16520Watermelon (Charleston Gray)cpiwcgB086
CSPI01G16520Watermelon (97103) v1cpiwmB102
CSPI01G16520Cucurbita pepo (Zucchini)cpecpiB365
CSPI01G16520Cucurbita pepo (Zucchini)cpecpiB660
CSPI01G16520Bottle gourd (USVL1VR-Ls)cpilsiB074
CSPI01G16520Melon (DHL92) v3.6.1cpimedB042
CSPI01G16520Cucumber (Gy14) v2cgybcpiB008
CSPI01G16520Silver-seed gourdcarcpiB0141
CSPI01G16520Cucumber (Chinese Long) v3cpicucB011