CSPI01G14010 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCGAAGAAGAAGAATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGGTATAAACATTCGACTTTTAAGAGAGATGATATATAAAATATACAAAAGTTGTTAGGTTTTGTTGATGTAAAAAAAACTTCAACTTCAAAATTATATATTTTCGATCAAATTCAAAGAATGAAATTTGTCGGATTTACCTTCATTTAAACTAATAGCTATTTTATTTTTTTGTTTTTAGATTTTGAAAATTAATGTTACGTATGCTATTAAAAAAAATAAGTTTTATTTTCCTTTCATTATCTATGCTCTCATGGGTTTCTTTCAAAATAAAAGTCAAACTTTGTCTCTATAAAAACTTATGGCTCTGTTTGTATCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGA ATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGA ATGAGAAGCAGCACTACTACTACTACTACTACACAAGGAGAAGCCTCCTCCTCATCCATTATTAGGGCCCCAAAAAGAGGAGCCTATAGGCAACATGGGATAGCAAAACGCACAAGGGTTATAAGAATCATAGGAAGAAGCTTGTTGTGTGTAATAATGCTTTTGGGTATTGCAATCCTCACATGTTGGTTTGTTGTCATCCCCAGAACCCCACAGCTCATGGTGGAAAGTGGCCAAGTCACAGGCTATCATTCAACTATTAGAAAGCTCAATGCCACCATAGTTTTCAATATCAGGAGCTACAACCCTAACAAAAGAGCCTCCATTTACGTGGATTCTATGAAGATGACAGTCAAAAACTATATGAGCGTACCATTTCACTCTGACATCCCCAACTTCACGATGACACCTCGAAACATGACTGTCTTGACCCCCACCATCCTTGTCAACTGCATATATCCGTTTGGGCGTCCGTTGCATGCAGGTTGGATACATATTGAGCTTAGCTTCTCAGCTAAAGTCAGTTACATTTTCAACAGATGGGCATCAAAACCTCGGTTGATGGAGATCTATTGTAATCACTTCTGGTTTAAGATCGATGATTCTATGCCTAATTTTGACAACATCAAATGCCAAGTGGATCTTTGA
BLAST of CSPI01G14010 vs. TrEMBL
Match: A0A0A0LV68_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132740 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 8.4e-118 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of CSPI01G14010 vs. TrEMBL
Match: A0A0A0LSU5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132730 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 1.7e-73 Identity = 136/208 (65.38%), Postives = 166/208 (79.81%), Query Frame = 1
BLAST of CSPI01G14010 vs. TrEMBL
Match: A0A0A0LY09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132760 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 9.8e-50 Identity = 114/214 (53.27%), Postives = 145/214 (67.76%), Query Frame = 1
BLAST of CSPI01G14010 vs. TrEMBL
Match: A0A0A0LSV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G134270 PE=4 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 6.6e-46 Identity = 103/188 (54.79%), Postives = 132/188 (70.21%), Query Frame = 1
BLAST of CSPI01G14010 vs. TrEMBL
Match: A0A0A0LVK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G132770 PE=4 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 5.6e-45 Identity = 108/215 (50.23%), Postives = 144/215 (66.98%), Query Frame = 1
BLAST of CSPI01G14010 vs. NCBI nr
Match: gi|778659281|ref|XP_011654120.1| (PREDICTED: uncharacterized protein LOC105435303 [Cucumis sativus]) HSP 1 Score: 431.0 bits (1107), Expect = 1.2e-117 Identity = 214/215 (99.53%), Postives = 214/215 (99.53%), Query Frame = 1
BLAST of CSPI01G14010 vs. NCBI nr
Match: gi|659071878|ref|XP_008462366.1| (PREDICTED: uncharacterized protein LOC103500736 [Cucumis melo]) HSP 1 Score: 378.3 bits (970), Expect = 9.3e-102 Identity = 190/211 (90.05%), Postives = 198/211 (93.84%), Query Frame = 1
BLAST of CSPI01G14010 vs. NCBI nr
Match: gi|659071883|ref|XP_008462391.1| (PREDICTED: uncharacterized protein At1g08160-like [Cucumis melo]) HSP 1 Score: 299.3 bits (765), Expect = 5.5e-78 Identity = 145/209 (69.38%), Postives = 171/209 (81.82%), Query Frame = 1
BLAST of CSPI01G14010 vs. NCBI nr
Match: gi|700209767|gb|KGN64863.1| (hypothetical protein Csa_1G132730 [Cucumis sativus]) HSP 1 Score: 283.9 bits (725), Expect = 2.4e-73 Identity = 136/208 (65.38%), Postives = 166/208 (79.81%), Query Frame = 1
BLAST of CSPI01G14010 vs. NCBI nr
Match: gi|778664977|ref|XP_011648453.1| (PREDICTED: uncharacterized protein LOC105434468 [Cucumis sativus]) HSP 1 Score: 204.9 bits (520), Expect = 1.4e-49 Identity = 91/142 (64.08%), Postives = 114/142 (80.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|