CSPI01G13470 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCAAGTCGATTGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGCAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGTCGACGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGTGTCGTCCCTTTGCGGGGGCGACGTTCGGAGGGTCATGCAGGAGTCCGTGGAGGCGACGTCGAGGCCGAGACGCGTCACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGACCGTCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGCACGGTAGGCCAGTGTGTGCCCTCGCCCGCACAACGAGCCCGCACGGTGGGCGGGGGAGTTGTGTGGGTGGGGACAACGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCACGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTCTGAGTAATACGACTAGAATGCTCCGCCCCCCGCACCACCGAGGCCGGTACGAGGGGCGGGCGAATTCATTTCAAGTTCCTTGGCGCGACCTACGCCGGTGTTTTGTTTTAGACGCGCCGGGAGGGGGAGGAGGAAGGCAAGCAAAGAGCGTGCTCGCCTCCCCATCGCCCCCGACGCGGTCGGTTTGTTTTGTAAACGCGTTCGCGGGTCGTTTGATGTTTTAG ATGCCCCAAGTCGATTGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGCAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGTCGACGACGCCCGATTCTCAAGCTGGGCTCTTCCCGTCCCGCCTGACCTGGGGTCGCGTCGAGAGTGTCGTCCCTTTGCGGGGGCGACGTTCGGAGGGTCATGCAGGAGTCCGTGGAGGCGACGTCGAGGCCGAGACGCGTCACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGACCGTCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGCACGGTAGGCCAGTGTGTGCCCTCGCCCGCACAACGAGCCCGCACGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCACGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTCTGAGTAATACGACTAGAATGCTCCGCCCCCCGCACCACCGAGGCCGGTACGAGGGGCGGGCGAATTCATTTCAAGTTCCTTGGCGCGACCTACGCCGGTGTTTTGTTTTAGACGCGCCGGGAGGGGGAGGAGGAAGGCAAGCAAAGAGCGTGCTCGCCTCCCCATCGCCCCCGACGCGGTCGGTTTGTTTTGTAAACGCGTTCGCGGGTCGTTTGATGTTTTAG ATGCCCCAAGTCGATTGGCGGACCGGCTCGTCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGCAGGGTTCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGAACGTCGACGACGCCCGATTCTCAAGCTGGGCTCTTCCCGTCCCGCCTGACCTGGGGTCGCGTCGAGAGTGTCGTCCCTTTGCGGGGGCGACGTTCGGAGGGTCATGCAGGAGTCCGTGGAGGCGACGTCGAGGCCGAGACGCGTCACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGACCGTCGAGGACTCGAATTTAAGCCATCCGCACGACGGTGCGCACGGTAGGCCAGTGTGTGCCCTCGCCCGCACAACGAGCCCGCACGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCACGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTCTGAGTAATACGACTAGAATGCTCCGCCCCCCGCACCACCGAGGCCGGTACGAGGGGCGGGCGAATTCATTTCAAGTTCCTTGGCGCGACCTACGCCGGTGTTTTGTTTTAGACGCGCCGGGAGGGGGAGGAGGAAGGCAAGCAAAGAGCGTGCTCGCCTCCCCATCGCCCCCGACGCGGTCGGTTTGTTTTGTAAACGCGTTCGCGGGTCGTTTGATGTTTTAG
BLAST of CSPI01G13470 vs. Swiss-Prot
Match: ART3_YEAST (Putative uncharacterized protein ART3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ART3 PE=5 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 3.0e-06 Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 1
BLAST of CSPI01G13470 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 2.2e-85 Identity = 170/223 (76.23%), Postives = 177/223 (79.37%), Query Frame = 1
BLAST of CSPI01G13470 vs. TrEMBL
Match: A0A0A0L1K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G243390 PE=4 SV=1) HSP 1 Score: 242.7 bits (618), Expect = 6.6e-61 Identity = 143/236 (60.59%), Postives = 152/236 (64.41%), Query Frame = 1
BLAST of CSPI01G13470 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 184.9 bits (468), Expect = 1.6e-43 Identity = 112/235 (47.66%), Postives = 131/235 (55.74%), Query Frame = 1
BLAST of CSPI01G13470 vs. TrEMBL
Match: I1LXT7_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 5.8e-41 Identity = 92/124 (74.19%), Postives = 94/124 (75.81%), Query Frame = 1
BLAST of CSPI01G13470 vs. TrEMBL
Match: A0A0R0GH08_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G011700 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.4e-39 Identity = 93/135 (68.89%), Postives = 98/135 (72.59%), Query Frame = 1
BLAST of CSPI01G13470 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus]) HSP 1 Score: 323.9 bits (829), Expect = 3.2e-85 Identity = 170/223 (76.23%), Postives = 177/223 (79.37%), Query Frame = 1
BLAST of CSPI01G13470 vs. NCBI nr
Match: gi|700198833|gb|KGN53991.1| (hypothetical protein Csa_4G243390 [Cucumis sativus]) HSP 1 Score: 242.7 bits (618), Expect = 9.4e-61 Identity = 143/236 (60.59%), Postives = 152/236 (64.41%), Query Frame = 1
BLAST of CSPI01G13470 vs. NCBI nr
Match: gi|947068851|gb|KRH17742.1| (hypothetical protein GLYMA_13G011700 [Glycine max]) HSP 1 Score: 169.9 bits (429), Expect = 7.7e-39 Identity = 93/135 (68.89%), Postives = 98/135 (72.59%), Query Frame = 1
BLAST of CSPI01G13470 vs. NCBI nr
Match: gi|922327221|ref|XP_013443003.1| (hypothetical protein MTR_0052s0140 [Medicago truncatula]) HSP 1 Score: 157.9 bits (398), Expect = 3.0e-35 Identity = 85/149 (57.05%), Postives = 95/149 (63.76%), Query Frame = 1
BLAST of CSPI01G13470 vs. NCBI nr
Match: gi|734424954|gb|KHN42849.1| (hypothetical protein glysoja_046946 [Glycine soja]) HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35 Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |