CSPI01G12700 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI01G12700
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Malectin/receptor-like protein kinase family protein
Location	Chr1 : 8143248 .. 8143466 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGATACTGGAATGTTCCGAACATGGTCCAACGAAGAAGAGGGTAATTTTTTGAAACTGTCTAAGGCAAAGTATGATGCTCGACCTGCTAACATCAATTTTCGCCCTAACTACAATAGTAAAGTTCCAACATACACCGCACCAGAAGATGTATATCGATCTGCTAGAACAATGGGACCCGATAAGACAGAGAATAAGAGATATAATCTGACATGA

mRNA sequence

ATGGAGGATACTGGAATGTTCCGAACATGGTCCAACGAAGAAGAGGGTAATTTTTTGAAACTGTCTAAGGCAAAGTATGATGCTCGACCTGCTAACATCAATTTTCGCCCTAACTACAATAGTAAAGTTCCAACATACACCGCACCAGAAGATGTATATCGATCTGCTAGAACAATGGGACCCGATAAGACAGAGAATAAGAGATATAATCTGACATGA

Coding sequence (CDS)

ATGGAGGATACTGGAATGTTCCGAACATGGTCCAACGAAGAAGAGGGTAATTTTTTGAAACTGTCTAAGGCAAAGTATGATGCTCGACCTGCTAACATCAATTTTCGCCCTAACTACAATAGTAAAGTTCCAACATACACCGCACCAGAAGATGTATATCGATCTGCTAGAACAATGGGACCCGATAAGACAGAGAATAAGAGATATAATCTGACATGA

Homology

[Close]

BLAST of CSPI01G12700 vs. TrEMBL
Match: A0A0A0KZI5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129580 PE=3 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 3.8e-22
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 1   MEDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG 60
           MEDTGMFRTW +EE  NFL+     YDARPAN + + NY+SKVP YTAPEDVYR+ARTMG
Sbjct: 255 MEDTGMFRTWYDEEVSNFLEPFTGNYDARPANSSIKLNYSSKVPAYTAPEDVYRTARTMG 314

Query: 61  PDKTENKRYNLT 73
           P+ TENKRYNLT
Sbjct: 315 PNTTENKRYNLT 326

[Close]

BLAST of CSPI01G12700 vs. TrEMBL
Match: A0A0A0KVY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129560 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-19
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 2  EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
          EDTGMFRTW NEE  +FLK S A YDA+PAN +   NY+SKVP Y APE+VYR+ARTMGP
Sbjct: 16 EDTGMFRTWFNEEN-SFLKPSSANYDAQPANSSIHLNYSSKVPAYIAPENVYRTARTMGP 75

Query: 62 DKTENKRYNLT 73
          + TENK YNLT
Sbjct: 76 NNTENKIYNLT 85

[Close]

BLAST of CSPI01G12700 vs. TrEMBL
Match: A0A0A0KY65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129600 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.2e-13
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 1


Query: 2   EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
           EDTGMFRTW+  EE N++    A  DARPAN++ + NY  + P YTAPE+VYR+ARTMGP
Sbjct: 249 EDTGMFRTWA--EESNYMNDYVA--DARPANLSIQLNYIERQP-YTAPENVYRTARTMGP 308

Query: 62  DKTENKRYNLT 73
           + T NK YNLT
Sbjct: 309 NSTLNKNYNLT 314

[Close]

BLAST of CSPI01G12700 vs. TrEMBL
Match: A0A0A0L0X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129570 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-09
Identity = 39/72 (54.17%), Postives = 48/72 (66.67%), Query Frame = 1


Query: 1   MEDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG 60
           +EDTGMFRTWS++     L       DAR  N     +Y S +PTYTAPE VYR+ARTMG
Sbjct: 256 VEDTGMFRTWSDDTN---LLDGYIHDDARLLNTTIHLHY-SLIPTYTAPELVYRTARTMG 315

Query: 61  PDKTENKRYNLT 73
            ++T+NK YNLT
Sbjct: 316 SNETDNKSYNLT 323

[Close]

BLAST of CSPI01G12700 vs. TrEMBL
Match: A0A059ADR7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01390 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.7e-09
Identity = 34/71 (47.89%), Postives = 44/71 (61.97%), Query Frame = 1


Query: 2   EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
           +DTGM+RTW  +E      L+ +     P N   + NY+ +VP YTAP+ VYR+ARTMG 
Sbjct: 252 DDTGMYRTWEADEA----YLTSSNIGVLPVNTTIQLNYSEQVPNYTAPDSVYRTARTMGT 311

Query: 62  DKTENKRYNLT 73
           DK  N  YNLT
Sbjct: 312 DKRINLSYNLT 318

[Close]

BLAST of CSPI01G12700 vs. TAIR10
Match: AT3G51550.1 (AT3G51550.1 Malectin/receptor-like protein kinase family protein)

HSP 1 Score: 48.9 bits (115), Expect = 1.5e-06
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = 1


Query: 3   DTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGPD 62
           DTG++R+W +++   F         A P   N    Y +  PTY AP DVY +AR+MGP 
Sbjct: 241 DTGLYRSWYDDQPYIFGAGLGIPETADP---NMTIKYPTGTPTYVAPVDVYSTARSMGPT 300

Query: 63  KTENKRYNLT 73
              N  YNLT
Sbjct: 301 AQINLNYNLT 307

[Close]

BLAST of CSPI01G12700 vs. TAIR10
Match: AT5G39000.1 (AT5G39000.1 Malectin/receptor-like protein kinase family protein)

HSP 1 Score: 48.5 bits (114), Expect = 2.0e-06
Identity = 27/72 (37.50%), Postives = 43/72 (59.72%), Query Frame = 1


Query: 3   DTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG-- 62
           D+GMFR W +++E   + LS++     P   + + NY  K P+Y AP+DVY ++R+MG  
Sbjct: 235 DSGMFRRWVSDDE---IILSESS-GISPIVPDIKINYTEKTPSYVAPDDVYATSRSMGNA 294

Query: 63  PDKTENKRYNLT 73
               +N  +NLT
Sbjct: 295 DHPEQNLNFNLT 302

[Close]

BLAST of CSPI01G12700 vs. TAIR10
Match: AT5G38990.1 (AT5G38990.1 Malectin/receptor-like protein kinase family protein)

HSP 1 Score: 48.1 bits (113), Expect = 2.6e-06
Identity = 31/72 (43.06%), Postives = 39/72 (54.17%), Query Frame = 1


Query: 3   DTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG-P 62
           D+GMFR W ++E G  L ++     A P     + NY  K P Y APEDVY + R MG  
Sbjct: 232 DSGMFRRWLSDE-GFLLGINSG---AIPNITGVKINYTDKTPAYVAPEDVYTTCRLMGNK 291

Query: 63  DKTE-NKRYNLT 73
           D  E N  +NLT
Sbjct: 292 DSPELNLNFNLT 299

[Close]

BLAST of CSPI01G12700 vs. NCBI nr
Match: gi|449438965|ref|XP_004137258.1| (PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 5.5e-22
Identity = 52/72 (72.22%), Postives = 59/72 (81.94%), Query Frame = 1


Query: 1   MEDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG 60
           MEDTGMFRTW +EE  NFL+     YDARPAN + + NY+SKVP YTAPEDVYR+ARTMG
Sbjct: 255 MEDTGMFRTWYDEEVSNFLEPFTGNYDARPANSSIKLNYSSKVPAYTAPEDVYRTARTMG 314

Query: 61  PDKTENKRYNLT 73
           P+ TENKRYNLT
Sbjct: 315 PNTTENKRYNLT 326

[Close]

BLAST of CSPI01G12700 vs. NCBI nr
Match: gi|659129240|ref|XP_008464587.1| (PREDICTED: receptor-like protein kinase FERONIA [Cucumis melo])

HSP 1 Score: 109.8 bits (273), Expect = 2.1e-21
Identity = 53/72 (73.61%), Postives = 60/72 (83.33%), Query Frame = 1


Query: 1   MEDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMG 60
           +EDTGMFRTW NEE  NFL    +KYDA+PA+ + R NY+SKVP YTAPEDVYR+ARTMG
Sbjct: 254 IEDTGMFRTWFNEER-NFLIPFPSKYDAQPADFSIRLNYSSKVPAYTAPEDVYRTARTMG 313

Query: 61  PDKTENKRYNLT 73
           PD TENKRYNLT
Sbjct: 314 PDNTENKRYNLT 324

[Close]

BLAST of CSPI01G12700 vs. NCBI nr
Match: gi|778697577|ref|XP_011654352.1| (PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-19
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 2   EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
           EDTGMFRTW NEE  +FLK S A YDA+PAN +   NY+SKVP Y APE+VYR+ARTMGP
Sbjct: 109 EDTGMFRTWFNEEN-SFLKPSSANYDAQPANSSIHLNYSSKVPAYIAPENVYRTARTMGP 168

Query: 62  DKTENKRYNLT 73
           + TENK YNLT
Sbjct: 169 NNTENKIYNLT 178

[Close]

BLAST of CSPI01G12700 vs. NCBI nr
Match: gi|700198632|gb|KGN53790.1| (hypothetical protein Csa_4G129560 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 4.3e-19
Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 2  EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
          EDTGMFRTW NEE  +FLK S A YDA+PAN +   NY+SKVP Y APE+VYR+ARTMGP
Sbjct: 16 EDTGMFRTWFNEEN-SFLKPSSANYDAQPANSSIHLNYSSKVPAYIAPENVYRTARTMGP 75

Query: 62 DKTENKRYNLT 73
          + TENK YNLT
Sbjct: 76 NNTENKIYNLT 85

[Close]

BLAST of CSPI01G12700 vs. NCBI nr
Match: gi|449438963|ref|XP_004137257.1| (PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus])

HSP 1 Score: 80.9 bits (198), Expect = 1.0e-12
Identity = 43/71 (60.56%), Postives = 53/71 (74.65%), Query Frame = 1


Query: 2   EDTGMFRTWSNEEEGNFLKLSKAKYDARPANINFRPNYNSKVPTYTAPEDVYRSARTMGP 61
           EDTGMFRTW+  EE N++    A  DARPAN++ + NY  + P YTAPE+VYR+ARTMGP
Sbjct: 249 EDTGMFRTWA--EESNYMNDYVA--DARPANLSIQLNYIERQP-YTAPENVYRTARTMGP 308

Query: 62  DKTENKRYNLT 73
           + T NK YNLT
Sbjct: 309 NSTLNKNYNLT 314

The following BLAST results are available for this feature:

BLAST of CSPI01G12700 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CSPI01G12700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZI5_CUCSA	3.8e-22	72.22	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129580 PE=3 SV=1	[more]
A0A0A0KVY1_CUCSA	3.0e-19	70.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129560 PE=4 SV=1	[more]
A0A0A0KY65_CUCSA	7.2e-13	60.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129600 PE=3 SV=1	[more]
A0A0A0L0X4_CUCSA	1.7e-09	54.17	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G129570 PE=4 SV=1	[more]
A0A059ADR7_EUCGR	1.7e-09	47.89	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01390 PE=3 SV=1	[more]

BLAST of CSPI01G12700 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G51550.1	1.5e-06	40.00	Malectin/receptor-like protein kinase family protein	[more]
AT5G39000.1	2.0e-06	37.50	Malectin/receptor-like protein kinase family protein	[more]
AT5G38990.1	2.6e-06	43.06	Malectin/receptor-like protein kinase family protein	[more]

BLAST of CSPI01G12700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438965\|ref\|XP_004137258.1\|	5.5e-22	72.22	PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus]	[more]
gi\|659129240\|ref\|XP_008464587.1\|	2.1e-21	73.61	PREDICTED: receptor-like protein kinase FERONIA [Cucumis melo]	[more]
gi\|778697577\|ref\|XP_011654352.1\|	4.3e-19	70.42	PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus]	[more]
gi\|700198632\|gb\|KGN53790.1\|	4.3e-19	70.42	hypothetical protein Csa_4G129560 [Cucumis sativus]	[more]
gi\|449438963\|ref\|XP_004137257.1\|	1.0e-12	60.56	PREDICTED: receptor-like protein kinase FERONIA [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI01G12700.1	CSPI01G12700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR27003	FAMILY NOT NAMED	coord: 1..72 score: 2.4
None	No IPR available	PANTHER	PTHR27003:SF104	SUBFAMILY NOT NAMED	coord: 1..72 score: 2.4

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI01G12700	Cucumber (Chinese Long) v3	cpicucB001
CSPI01G12700	Cucumber (Chinese Long) v3	cpicucB059
CSPI01G12700	Watermelon (97103) v2	cpiwmbB029
CSPI01G12700	Watermelon (97103) v2	cpiwmbB034
CSPI01G12700	Wax gourd	cpiwgoB037
CSPI01G12700	Wax gourd	cpiwgoB019
CSPI01G12700	Wild cucumber (PI 183967)	cpicpiB048
CSPI01G12700	Cucurbita maxima (Rimu)	cmacpiB205
CSPI01G12700	Cucurbita maxima (Rimu)	cmacpiB434
CSPI01G12700	Cucurbita maxima (Rimu)	cmacpiB586
CSPI01G12700	Cucurbita moschata (Rifu)	cmocpiB192
CSPI01G12700	Cucurbita moschata (Rifu)	cmocpiB425
CSPI01G12700	Cucurbita moschata (Rifu)	cmocpiB574
CSPI01G12700	Cucumber (Chinese Long) v2	cpicuB000
CSPI01G12700	Cucumber (Chinese Long) v2	cpicuB048
CSPI01G12700	Melon (DHL92) v3.5.1	cpimeB010
CSPI01G12700	Melon (DHL92) v3.5.1	cpimeB011
CSPI01G12700	Watermelon (Charleston Gray)	cpiwcgB035
CSPI01G12700	Watermelon (Charleston Gray)	cpiwcgB040
CSPI01G12700	Watermelon (97103) v1	cpiwmB012
CSPI01G12700	Watermelon (97103) v1	cpiwmB077
CSPI01G12700	Cucurbita pepo (Zucchini)	cpecpiB518
CSPI01G12700	Cucurbita pepo (Zucchini)	cpecpiB530
CSPI01G12700	Bottle gourd (USVL1VR-Ls)	cpilsiB004
CSPI01G12700	Bottle gourd (USVL1VR-Ls)	cpilsiB023
CSPI01G12700	Melon (DHL92) v3.6.1	cpimedB009
CSPI01G12700	Melon (DHL92) v3.6.1	cpimedB011
CSPI01G12700	Cucumber (Gy14) v2	cgybcpiB001
CSPI01G12700	Silver-seed gourd	carcpiB0477
CSPI01G12700	Silver-seed gourd	carcpiB0761