CSPI01G11970 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTGCATCTGCTTCGGTTCCTCTACTTTGGAGAAGGAACGAATCTCTACACGTGCTGATAAGGAATTGGACAGTAAGGACTTGAATAAGCATAGGTTTTTTTGGTTTATGCAAACATAGATATAGGAAATCCATTACTTGAAAAGTATATCTGGGTATACCAAATGAGAATTTATTTGATCATCGAAAGTTGAGAGTACAAGAAGACAAATACTTTATTTATAGCAAAAGCAAACTAATCTGAATCCTAATTCTAATTAATCAAAGAAATTTAATCCTAATCCCAAATAATAAAAGAAACCAATCCTAATCCTAATAAACCAAAGAAACTAATCATAATCCTAATACATCAAGAATTTGACCTACTAGTCAATATCAGCAAATTTACGGATGTATTTGGGTTTCAATTTCCCGACATATATTGTAAAGAATATTTTTGCATGTTTTGTGTTTATTGGGCTTACTAGCGTATATTTTATGTAATTTTTCTTTTTCCTTTGTTTTCTGTTGCCTAGTCGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACGACTTCCATTCGAACAATAGAATTGGACGAGGAGGTTTTGGAACTGTTTACAAGGTAATTTTTTTTATTGATAACGTCAAGTGAATGTTCAATCATGTGGTGTCCTGTCTATAATGTGTAGGGAATGGGGAATGCTTGGACACTTGGGATGGTATGGGGACCTAGAGTGCATGCCCGTTCCCTACATATTATGGACATACGTCGAGGCCTAGACACTTAAAATTCTCCTAGGGTCTCTTTTCTTTTTCTTGGAACAACTGCCCGACCTTCACCATCTGGGTGTCAAGGAAATTTCTAGAAAATTAATTTCTAGGTAGCTGACCATCAAGGATTGAACCATTGACCTCTTAATCTTTTTTGAGACCATGTCTCTTTTTACTACTAAGCTAACCCATGATGGTTGATGAAACATTTGATGATGAAAATAATGTTTAAGTACTAACAATTTTTTATTTTTATTTTATTATTCTTTGTAATCTACTTTTGAAGATGTTTTTAAAATCATAGTCAATATTCTTGAAGTTAGAAAAGCAATTTTAGAAAATCTATTCTGGATTTTGACACTTGGCTAATTCTTTTAAAATTATAATGTACAATAAAAAATTTTAAAGTTAGAAAAACCACCTTAGAAATAAACCATGTAAGCTAAATGGTTGACATTTGTTCTAATTTCTACACAGGTAGGTGATTGTTTGGTGCTTGATATGTTTAAAAGTACTTTGCTTTGATGAGAAAAAAATATAAATAATATATTGTACAATACACTCATAGTTGGTTTCTTTCTCTTGTTCCTGCATGTGTAATGAATCTTACCGTAAGAACATTTGTTACCAGGGCACATTAAGGAATGGAGTACAAGTTGCGATAAAGAAACTCTCTATAGAGTCTAAGCAAGGCGCTCGCGAATTTTTGACAGAGATCAAAACCATTTCAAATATTAGGCATCCTAACCTTGTTGAGTTAATTGGATGCTGTTCTCAAAAAGCTAGCCGAATCTTGGTATATGAATATCTGGAAAACAACAGTCTCGACCATGCTTTGTTAGGTATTTATGAAGATTTTTCTAATTAAAAAGCACGTATCTTTACTCTTCTTTGTAATTTATTTCCTTGAGTAGGCTCTTTGAGGTGGGGTGAGGCTGGGGGAGAGAGGACTTGATGGGTCTTTTGGATGCCCTTAAAACACTTTCCATGTGGTTTGGGAGGATGTTACCTCTTCCTACCCTTCCCATCTATAGGAATCCATGAACTTATAACTTTGTAGTAAAATGCAATACTCTTGCAGCAGTAATAATATTTTCTTCTATTCTTTCTTTGTAGATCCTAAAAAAATAAGCGTCCATCTGGATTGGAGGAAGAGGTCCTCTATTTGCATTGGTACTGCTAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACATATTGTGCATAGAGACATCAAGGCTAGTAATATTCTCCTTGATAAAGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATTACTCACATTAGCACAAGAATTGCAGGAACAACGTATGTCATATCACAATCTTTCATCTTATGTGTTTTTCAGTTTGATTATCCGTACACTTTTTTACATTGTTTTCATAGTGCTTATGCTACACCATACTTCCCTATTGCATTTTATTAAACTTTGCAAAATCAAGTATGTTGGGATAAATTGCCTCAATTTGGCTTAAGGATCCCTCTTCCCTCGTGCATTTTGGCTGTGGTTCTCTCTCTTTTGTTTACCATAAAGTTTCTTCGTTTCTTATACAAAAAAAGCCTCAACTTGAATGTTGTTCATTTTTCTATTGTAGCAAATGTGTCACCATTGTCCATGACATAGCATAG ATGAGTTGCATCTGCTTCGGTTCCTCTACTTTGGAGAAGGAACGAATCTCTACACGTGCTGATAAGGAATTGGACATCGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACGACTTCCATTCGAACAATAGAATTGGACGAGGAGGTTTTGGAACTGTTTACAAGGGCACATTAAGGAATGGAGTACAAGTTGCGATAAAGAAACTCTCTATAGAGTCTAAGCAAGGCGCTCGCGAATTTTTGACAGAGATCAAAACCATTTCAAATATTAGGCATCCTAACCTTGTTGAGTTAATTGGATGCTGTTCTCAAAAAGCTAGCCGAATCTTGGTATATGAATATCTGGAAAACAACAGTCTCGACCATGCTTTGTTAGATCCTAAAAAAATAAGCGTCCATCTGGATTGGAGGAAGAGGTCCTCTATTTGCATTGGTACTGCTAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACATATTGTGCATAGAGACATCAAGGCTAGTAATATTCTCCTTGATAAAGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATTACTCACATTAGCACAAGAATTGCAGGAACAACCAAATGTGTCACCATTGTCCATGACATAGCATAG ATGAGTTGCATCTGCTTCGGTTCCTCTACTTTGGAGAAGGAACGAATCTCTACACGTGCTGATAAGGAATTGGACATCGACTTGCTTGAGAATGTAAAACAAATCTCCTTCAATGAATTAAGATCTGCTTCGGACGACTTCCATTCGAACAATAGAATTGGACGAGGAGGTTTTGGAACTGTTTACAAGGGCACATTAAGGAATGGAGTACAAGTTGCGATAAAGAAACTCTCTATAGAGTCTAAGCAAGGCGCTCGCGAATTTTTGACAGAGATCAAAACCATTTCAAATATTAGGCATCCTAACCTTGTTGAGTTAATTGGATGCTGTTCTCAAAAAGCTAGCCGAATCTTGGTATATGAATATCTGGAAAACAACAGTCTCGACCATGCTTTGTTAGATCCTAAAAAAATAAGCGTCCATCTGGATTGGAGGAAGAGGTCCTCTATTTGCATTGGTACTGCTAGGGGTCTTCAATTTCTTCACGAGGAAGCTGTTCCACATATTGTGCATAGAGACATCAAGGCTAGTAATATTCTCCTTGATAAAGACTTCAATCCGAAAATTGGTGACTTTGGATTAGCCAAACTTTTCCCAGATGATATTACTCACATTAGCACAAGAATTGCAGGAACAACCAAATGTGTCACCATTGTCCATGACATAGCATAG
BLAST of CSPI01G11970 vs. Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2) HSP 1 Score: 219.5 bits (558), Expect = 3.6e-56 Identity = 111/202 (54.95%), Postives = 141/202 (69.80%), Query Frame = 1
BLAST of CSPI01G11970 vs. Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.5e-54 Identity = 103/177 (58.19%), Postives = 132/177 (74.58%), Query Frame = 1
BLAST of CSPI01G11970 vs. Swiss-Prot
Match: Y3148_ARATH (Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS=Arabidopsis thaliana GN=LRR-RLK PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.6e-54 Identity = 103/195 (52.82%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CSPI01G11970 vs. Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=2 SV=2) HSP 1 Score: 213.4 bits (542), Expect = 2.6e-54 Identity = 111/219 (50.68%), Postives = 148/219 (67.58%), Query Frame = 1
BLAST of CSPI01G11970 vs. Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=2 SV=2) HSP 1 Score: 210.7 bits (535), Expect = 1.7e-53 Identity = 110/204 (53.92%), Postives = 141/204 (69.12%), Query Frame = 1
BLAST of CSPI01G11970 vs. TrEMBL
Match: A0A0A0LSB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G073700 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 2.4e-123 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of CSPI01G11970 vs. TrEMBL
Match: W9RL53_9ROSA (Putative LRR receptor-like serine/threonine-protein kinase OS=Morus notabilis GN=L484_012107 PE=3 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.6e-85 Identity = 154/213 (72.30%), Postives = 180/213 (84.51%), Query Frame = 1
BLAST of CSPI01G11970 vs. TrEMBL
Match: M5WFT6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007355mg PE=3 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 5.7e-85 Identity = 154/213 (72.30%), Postives = 179/213 (84.04%), Query Frame = 1
BLAST of CSPI01G11970 vs. TrEMBL
Match: B9H273_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s04030g PE=3 SV=2) HSP 1 Score: 319.7 bits (818), Expect = 2.8e-84 Identity = 155/214 (72.43%), Postives = 181/214 (84.58%), Query Frame = 1
BLAST of CSPI01G11970 vs. TrEMBL
Match: A0A0B2PLL3_GLYSO (Putative LRR receptor-like serine/threonine-protein kinase OS=Glycine soja GN=glysoja_026920 PE=3 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.8e-84 Identity = 152/213 (71.36%), Postives = 182/213 (85.45%), Query Frame = 1
BLAST of CSPI01G11970 vs. TAIR10
Match: AT3G09010.1 (AT3G09010.1 Protein kinase superfamily protein) HSP 1 Score: 271.2 bits (692), Expect = 5.8e-73 Identity = 133/210 (63.33%), Postives = 159/210 (75.71%), Query Frame = 1
BLAST of CSPI01G11970 vs. TAIR10
Match: AT1G16670.1 (AT1G16670.1 Protein kinase superfamily protein) HSP 1 Score: 233.4 bits (594), Expect = 1.4e-61 Identity = 115/200 (57.50%), Postives = 145/200 (72.50%), Query Frame = 1
BLAST of CSPI01G11970 vs. TAIR10
Match: AT1G53420.1 (AT1G53420.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 219.5 bits (558), Expect = 2.0e-57 Identity = 111/202 (54.95%), Postives = 141/202 (69.80%), Query Frame = 1
BLAST of CSPI01G11970 vs. TAIR10
Match: AT1G53430.1 (AT1G53430.1 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 214.2 bits (544), Expect = 8.5e-56 Identity = 103/177 (58.19%), Postives = 132/177 (74.58%), Query Frame = 1
BLAST of CSPI01G11970 vs. TAIR10
Match: AT3G14840.2 (AT3G14840.2 Leucine-rich repeat transmembrane protein kinase) HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55 Identity = 103/195 (52.82%), Postives = 139/195 (71.28%), Query Frame = 1
BLAST of CSPI01G11970 vs. NCBI nr
Match: gi|700209567|gb|KGN64663.1| (hypothetical protein Csa_1G073700 [Cucumis sativus]) HSP 1 Score: 449.5 bits (1155), Expect = 3.4e-123 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
BLAST of CSPI01G11970 vs. NCBI nr
Match: gi|778658698|ref|XP_011653110.1| (PREDICTED: putative serine/threonine-protein kinase [Cucumis sativus]) HSP 1 Score: 429.1 bits (1102), Expect = 4.8e-117 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 1
BLAST of CSPI01G11970 vs. NCBI nr
Match: gi|659068022|ref|XP_008442328.1| (PREDICTED: putative serine/threonine-protein kinase [Cucumis melo]) HSP 1 Score: 412.9 bits (1060), Expect = 3.5e-112 Identity = 205/213 (96.24%), Postives = 208/213 (97.65%), Query Frame = 1
BLAST of CSPI01G11970 vs. NCBI nr
Match: gi|1009109451|ref|XP_015890270.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 159/213 (74.65%), Postives = 183/213 (85.92%), Query Frame = 1
BLAST of CSPI01G11970 vs. NCBI nr
Match: gi|1009109449|ref|XP_015890268.1| (PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 330.9 bits (847), Expect = 1.8e-87 Identity = 159/213 (74.65%), Postives = 183/213 (85.92%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |