CSPI01G10580 (gene) Wild cucumber (PI 183967)

NameCSPI01G10580
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 6639197 .. 6639553 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACCACCACCGCCGCCGCCAAACCCTCCGCCACCGCCACTCCCTAGACCTCCAATGCCAGATCCGAAACCCCCTCCACCTCCACTGCCGAAGCCCGAACCACCACCTAACCCACCGCCGCCGCCGCCACCGAACCCTCCGCCACCGCCGAGCCCGCCTCCGTATCCAGGAAAGAACTGGAAAGGCAATGTCTTTTCACTCTCAATCTCTCCCCCATTTGTAATTACAAGTTTTCTGGGCTCTGAGGCCCAAATTAGTGCACACAGAACCACCAGCCAGAGATATTTGAAAGCCGAAGAACCCATAATTTTTTTTAGAAAAAGAATAATTTGTTTTGATGGGAATCAAGAGTTT

mRNA sequence

ATGCCACCACCACCGCCGCCGCCAAACCCTCCGCCACCGCCACTCCCTAGACCTCCAATGCCAGATCCGAAACCCCCTCCACCTCCACTGCCGAAGCCCGAACCACCACCTAACCCACCGCCGCCGCCGCCACCGAACCCTCCGCCACCGCCGAGCCCGCCTCCGTATCCAGGAAAGAACTGGAAAGGCAATGTCTTTTCACTCTCAATCTCTCCCCCATTTGTAATTACAAGTTTTCTGGGCTCTGAGGCCCAAATTAGTGCACACAGAACCACCAGCCAGAGATATTTGAAAGCCGAAGAACCCATAATTTTTTTTAGAAAAAGAATAATTTGTTTTGATGGGAATCAAGAGTTT

Coding sequence (CDS)

ATGCCACCACCACCGCCGCCGCCAAACCCTCCGCCACCGCCACTCCCTAGACCTCCAATGCCAGATCCGAAACCCCCTCCACCTCCACTGCCGAAGCCCGAACCACCACCTAACCCACCGCCGCCGCCGCCACCGAACCCTCCGCCACCGCCGAGCCCGCCTCCGTATCCAGGAAAGAACTGGAAAGGCAATGTCTTTTCACTCTCAATCTCTCCCCCATTTGTAATTACAAGTTTTCTGGGCTCTGAGGCCCAAATTAGTGCACACAGAACCACCAGCCAGAGATATTTGAAAGCCGAAGAACCCATAATTTTTTTTAGAAAAAGAATAATTTGTTTTGATGGGAATCAAGAGTTT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G10580.1CSPI01G10580.1mRNA


Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 1..12
score: 2.1E-11coord: 12..28
score: 2.1E-11coord: 32..49
score: 2.1

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G10580Cucumber (Chinese Long) v2cpicuB000
CSPI01G10580Cucumber (Chinese Long) v2cpicuB044
CSPI01G10580Melon (DHL92) v3.5.1cpimeB024
CSPI01G10580Melon (DHL92) v3.5.1cpimeB036
CSPI01G10580Melon (DHL92) v3.5.1cpimeB086
CSPI01G10580Watermelon (Charleston Gray)cpiwcgB016
CSPI01G10580Watermelon (Charleston Gray)cpiwcgB038
CSPI01G10580Watermelon (97103) v1cpiwmB010
CSPI01G10580Watermelon (97103) v1cpiwmB043
CSPI01G10580Cucurbita pepo (Zucchini)cpecpiB050
CSPI01G10580Cucurbita pepo (Zucchini)cpecpiB474
CSPI01G10580Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G10580Bottle gourd (USVL1VR-Ls)cpilsiB018
CSPI01G10580Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G10580Bottle gourd (USVL1VR-Ls)cpilsiB030
CSPI01G10580Melon (DHL92) v3.6.1cpimedB023
CSPI01G10580Melon (DHL92) v3.6.1cpimedB076
CSPI01G10580Cucumber (Gy14) v2cgybcpiB001
CSPI01G10580Cucumber (Gy14) v2cgybcpiB247
CSPI01G10580Silver-seed gourdcarcpiB0531
CSPI01G10580Silver-seed gourdcarcpiB0670
CSPI01G10580Silver-seed gourdcarcpiB0968
CSPI01G10580Silver-seed gourdcarcpiB1044
CSPI01G10580Cucumber (Chinese Long) v3cpicucB001
CSPI01G10580Cucumber (Chinese Long) v3cpicucB009
CSPI01G10580Cucumber (Chinese Long) v3cpicucB010
CSPI01G10580Cucumber (Chinese Long) v3cpicucB051
CSPI01G10580Watermelon (97103) v2cpiwmbB001
CSPI01G10580Watermelon (97103) v2cpiwmbB032
CSPI01G10580Watermelon (97103) v2cpiwmbB041
CSPI01G10580Wax gourdcpiwgoB023
CSPI01G10580Wax gourdcpiwgoB033
CSPI01G10580Wax gourdcpiwgoB047
CSPI01G10580Wild cucumber (PI 183967)cpicpiB038
CSPI01G10580Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G10580Cucumber (Gy14) v1cgycpiB016
CSPI01G10580Cucumber (Gy14) v1cgycpiB090
CSPI01G10580Cucurbita maxima (Rimu)cmacpiB219
CSPI01G10580Cucurbita maxima (Rimu)cmacpiB401
CSPI01G10580Cucurbita maxima (Rimu)cmacpiB656
CSPI01G10580Cucurbita maxima (Rimu)cmacpiB865
CSPI01G10580Cucurbita moschata (Rifu)cmocpiB205
CSPI01G10580Cucurbita moschata (Rifu)cmocpiB383
CSPI01G10580Cucurbita moschata (Rifu)cmocpiB648
CSPI01G10580Cucurbita moschata (Rifu)cmocpiB845