CSPI01G10490 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G10490
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionAnkyrin repeat family protein
LocationChr1 : 6602258 .. 6602898 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTCACCCACCTACTCAAGTTTTTAGGTTAATTGACAATTTAATCATATTACATAGAAAAGAGGTTGGTTGTGAAGCTCATGTATTCAAATTCCTACAGTTATACGGAAGGAATTGGTGCAAACTCCGCTATGCAGAGAAGCTACGAAGGAATTGGTGGAAAATCGGCTACTTGAAGCAGCTATGAAGGGCGATTGGAAGGCAGCAGAGAAATTGGTTCAGGAACATGAAAATATCAGCTTGTTGGATGTAATAAGCAAGGATAGAAAGGAAACAGCCCTCCACATTGCCACAAGATTCAACAACACTGCTTTTGTGAAGAAGCTGATGCCACAACTCACCGAAAATGACTTGGAAGCCAAAAATATTTATGGAAACACCCCCCTTTGCATTGCTGCTATGACAGGGGCTGCAGATATTGCAAAGTTGATGGTGGACAGGCATGAGGAATTAGTCCTCAAGCGTGGCTCAGGAAACGCACTCCCGCTTTTGATTGCTGCAAGATATAAACAATTCCACATGGTTTCTTATCTCCTTAAAGCCATGAATTCCCATATCAAAAAACTGAATGATACAGACAAAAAGGAGATTCTTTTTAGTGTCATCTCCTCCAATGATTACGGTTTGTTCAAAACTATCTAA

mRNA sequence

ATGAAGGGCGATTGGAAGGCAGCAGAGAAATTGGTTCAGGAACATGAAAATATCAGCTTGTTGGATGTAATAAGCAAGGATAGAAAGGAAACAGCCCTCCACATTGCCACAAGATTCAACAACACTGCTTTTGTGAAGAAGCTGATGCCACAACTCACCGAAAATGACTTGGAAGCCAAAAATATTTATGGAAACACCCCCCTTTGCATTGCTGCTATGACAGGGGCTGCAGATATTGCAAAGTTGATGGTGGACAGGCATGAGGAATTAGTCCTCAAGCGTGGCTCAGGAAACGCACTCCCGCTTTTGATTGCTGCAAGATATAAACAATTCCACATGGTTTCTTATCTCCTTAAAGCCATGAATTCCCATATCAAAAAACTGAATGATACAGACAAAAAGGAGATTCTTTTTAGTGTCATCTCCTCCAATGATTACGGTTTGTTCAAAACTATCTAA

Coding sequence (CDS)

ATGAAGGGCGATTGGAAGGCAGCAGAGAAATTGGTTCAGGAACATGAAAATATCAGCTTGTTGGATGTAATAAGCAAGGATAGAAAGGAAACAGCCCTCCACATTGCCACAAGATTCAACAACACTGCTTTTGTGAAGAAGCTGATGCCACAACTCACCGAAAATGACTTGGAAGCCAAAAATATTTATGGAAACACCCCCCTTTGCATTGCTGCTATGACAGGGGCTGCAGATATTGCAAAGTTGATGGTGGACAGGCATGAGGAATTAGTCCTCAAGCGTGGCTCAGGAAACGCACTCCCGCTTTTGATTGCTGCAAGATATAAACAATTCCACATGGTTTCTTATCTCCTTAAAGCCATGAATTCCCATATCAAAAAACTGAATGATACAGACAAAAAGGAGATTCTTTTTAGTGTCATCTCCTCCAATGATTACGGTTTGTTCAAAACTATCTAA
Homology
[Close]
BLAST of CSPI01G10490 vs. Swiss-Prot
Match: ANS1B_DANRE (Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Danio rerio GN=anks1b PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.8e-06
Identity = 31/92 (33.70%), Postives = 51/92 (55.43%), Query Frame = 1 

Query: 29  KETALHIATRFNNTAFVKKLMPQLTENDLEAKNIYGNTPLCIAAMTGAADIAKLMVDRHE 88
           KETALH A ++ ++  V+ L+ +LT  D   +N  G TPL +AA+ G   + ++++  H 
Sbjct: 127 KETALHCAAQYGHSEVVRVLLQELT--DPSMRNSRGETPLDLAALYGRLQVVRMLLTAHP 186

Query: 89  ELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
            L +   +    PL +AAR   +  V  LL+A
Sbjct: 187 NL-MSCNTRKHTPLHLAARNGHYATVQVLLEA 215

[Close]
BLAST of CSPI01G10490 vs. TrEMBL
Match: A0A0A0LX18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-75
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK
Sbjct: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA
Sbjct: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           MNSHIKKLNDTDKKEILFSVISSNDY +
Sbjct: 121 MNSHIKKLNDTDKKEILFSVISSNDYDI 148

[Close]
BLAST of CSPI01G10490 vs. TrEMBL
Match: E5GC67_CUCME (Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.4e-42
Identity = 94/148 (63.51%), Postives = 120/148 (81.08%), Query Frame = 1 

Query: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61
           +GDWKAAE++ ++++ I L +VISKDRKETALHIATRFN  AFV+KL+  +LT  DLEAK
Sbjct: 99  RGDWKAAEEMEKKNKGI-LSNVISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAK 158

Query: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
           NIYGNT LCIAA +GA DIAKLMV +H +LVL RGS NA P+LIAARYK  HMVS+LLKA
Sbjct: 159 NIYGNTALCIAATSGAVDIAKLMVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKA 218

Query: 122 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           M+  ++K+  +++ E+L S I+S+ YGL
Sbjct: 219 MDLIVQKMEISEQMELLLSAIASDHYGL 245

[Close]
BLAST of CSPI01G10490 vs. TrEMBL
Match: A0A0A0LUS0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-41
Identity = 90/148 (60.81%), Postives = 118/148 (79.73%), Query Frame = 1 

Query: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61
           +GDWKAAE++ ++ + I L +VISKDRKETALHIATRFN  AFV+KL+  +LT+ DLEAK
Sbjct: 83  RGDWKAAEEIEKKSKGI-LSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAK 142

Query: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
           NIYGNT LCIAA +GA DIA+LM  +H +LVL RGS NA P+LIAARYK  HMVS+LLK+
Sbjct: 143 NIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKS 202

Query: 122 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           MN  ++K+  +++ E+L S I+S+ Y +
Sbjct: 203 MNKIVQKMEISEQMELLLSAIASDHYDI 229

[Close]
BLAST of CSPI01G10490 vs. TrEMBL
Match: A0A0A0LUR7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.8e-27
Identity = 71/147 (48.30%), Postives = 99/147 (67.35%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           +KGDW+ A+++   H     L ++  +R ETALHIATR    +FV+KL+ +L E++L +K
Sbjct: 107 LKGDWEGAKQMEMMHPGA--LTMVISERSETALHIATRVKRASFVEKLVERLDEHELASK 166

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           N YGNT LCIAA +GA  IAKL+V +++ L L RGSGNA P+LIAARYK   MVSYLL  
Sbjct: 167 NKYGNTALCIAAASGAVAIAKLLVIKYKALPLIRGSGNATPVLIAARYKHKDMVSYLLS- 226

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYG 148
             + +  L   ++ E+L   IS++ YG
Sbjct: 227 -QTPVYGLAREEQMELLLGAISADYYG 249

[Close]
BLAST of CSPI01G10490 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20
Identity = 59/148 (39.86%), Postives = 92/148 (62.16%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           +KGDW+ AE +++   + S+ + I++D  ETALHIA    +  FV+KL+  +T +D+   
Sbjct: 121 LKGDWEKAESILKADTSWSVSNYITRDN-ETALHIAAGAKHVEFVEKLIDTMTLDDMVII 180

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           N +GNT LC AA +G   IA+LMV ++++L L RG GNA PL +A  Y++  M SYL   
Sbjct: 181 NTHGNTALCFAATSGVVRIAELMVKKNKDLPLIRGFGNATPLFMAISYQRKQMASYLFSV 240

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
            +   K+L   D+ E+L + I S+ Y +
Sbjct: 241 TDR--KQLTSQDQIELLIATIHSDFYDI 265

[Close]
BLAST of CSPI01G10490 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 105.9 bits (263), Expect = 2.2e-23
Identity = 55/146 (37.67%), Postives = 87/146 (59.59%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           +KGDWKAA  ++ E + I    + SK   ET LHIA    +  FV+ L+  L  NDL  +
Sbjct: 96  LKGDWKAANGIIIEQKYIIYQKITSKS--ETVLHIAVAAKHEGFVRNLLGSLESNDLALR 155

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           N+ GNT LC AA +G  +IAK++++++++L + RG G   P+ +AA +    MV YL K 
Sbjct: 156 NVDGNTALCFAAASGVVEIAKMLIEKNKDLPMIRGGGKTTPIHMAALFGHGEMVKYLYK- 215

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDY 147
            N+  ++ ND +   +  +VIS++ Y
Sbjct: 216 -NTRFREFNDEEFVNLFHAVISADIY 237

[Close]
BLAST of CSPI01G10490 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 79.3 bits (194), Expect = 2.2e-15
Identity = 50/152 (32.89%), Postives = 79/152 (51.97%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           + GDWK A  L+   E  ++++ I+ +  E ALHIA    +  FV+ L+ ++   DL  K
Sbjct: 59  LTGDWKTASTLISRKE-CNVVEQITGN-SEIALHIAVAAKHKDFVRNLLREMDPPDLSLK 118

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           N  GNTPL  AA  G  + A+++++   +L          P+ IAA Y    MV YL   
Sbjct: 119 NKDGNTPLSFAAALGDIETAEMLINMIRDLPDISNEKTMTPIHIAALYGHGEMVQYLFS- 178

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYGLFKTI 153
             + IK LND     +  ++IS++ YG+F  +
Sbjct: 179 -KTSIKDLNDQQYLNLFHTMISADIYGVFADV 206

[Close]
BLAST of CSPI01G10490 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.9e-06
Identity = 28/91 (30.77%), Postives = 49/91 (53.85%), Query Frame = 1 

Query: 30  ETALHIATRFNNTAFVKKLMPQLTENDLEAK---NIYGNTPLCIAAMTGAADIAKLMVDR 89
           ET L  A  + N   VK L+ ++T   +  K   N + NTPL + A++G  +IA+ +V +
Sbjct: 110 ETPLLKACAYGNPEIVKLLLRRMTPEQMLPKMSQNNFYNTPLTVVAVSGNMEIAEALVAK 169

Query: 90  HEELVLKRGSGNALPLLIAARYKQFHMVSYL 118
           + +L+   G+   +P+++A    Q  M  YL
Sbjct: 170 NPKLLEIPGNNGEIPVVVAVENTQMEMARYL 200

[Close]
BLAST of CSPI01G10490 vs. NCBI nr
Match: gi|778664854|ref|XP_011648417.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK
Sbjct: 78  MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 137

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA
Sbjct: 138 NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 197

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           MNSHIKKLNDTDKKEILFSVISSNDY +
Sbjct: 198 MNSHIKKLNDTDKKEILFSVISSNDYDI 225

[Close]
BLAST of CSPI01G10490 vs. NCBI nr
Match: gi|700209405|gb|KGN64501.1| (hypothetical protein Csa_1G060780 [Cucumis sativus])

HSP 1 Score: 290.4 bits (742), Expect = 1.8e-75
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60
           MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK
Sbjct: 1   MKGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMPQLTENDLEAK 60

Query: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120
           NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA
Sbjct: 61  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 120

Query: 121 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           MNSHIKKLNDTDKKEILFSVISSNDY +
Sbjct: 121 MNSHIKKLNDTDKKEILFSVISSNDYDI 148

[Close]
BLAST of CSPI01G10490 vs. NCBI nr
Match: gi|307136229|gb|ADN34066.1| (ankyrin repeat family protein [Cucumis melo subsp. melo])

HSP 1 Score: 179.9 bits (455), Expect = 3.4e-42
Identity = 94/148 (63.51%), Postives = 120/148 (81.08%), Query Frame = 1 

Query: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61
           +GDWKAAE++ ++++ I L +VISKDRKETALHIATRFN  AFV+KL+  +LT  DLEAK
Sbjct: 99  RGDWKAAEEMEKKNKGI-LSNVISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAK 158

Query: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
           NIYGNT LCIAA +GA DIAKLMV +H +LVL RGS NA P+LIAARYK  HMVS+LLKA
Sbjct: 159 NIYGNTALCIAATSGAVDIAKLMVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKA 218

Query: 122 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           M+  ++K+  +++ E+L S I+S+ YGL
Sbjct: 219 MDLIVQKMEISEQMELLLSAIASDHYGL 245

[Close]
BLAST of CSPI01G10490 vs. NCBI nr
Match: gi|659067708|ref|XP_008440886.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo])

HSP 1 Score: 176.4 bits (446), Expect = 3.8e-41
Identity = 92/148 (62.16%), Postives = 119/148 (80.41%), Query Frame = 1 

Query: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61
           +GDWKAAE++ ++++ I L +VISKDRKETALHIATRFN  AFV+KL+  +LT  DLEAK
Sbjct: 99  RGDWKAAEEMEKKNKGI-LSNVISKDRKETALHIATRFNKAAFVEKLIESKLTIKDLEAK 158

Query: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
           NIYGNT LCIAA +GA DIAKLMV +H +LVL RGS NA P+LIAARYK  HMVS+LLKA
Sbjct: 159 NIYGNTALCIAATSGAVDIAKLMVRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKA 218

Query: 122 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           M+  ++K+  +++ E+L S I+S+ Y +
Sbjct: 219 MDLIVQKMEISEQMELLLSAIASDHYDI 245

[Close]
BLAST of CSPI01G10490 vs. NCBI nr
Match: gi|778664857|ref|XP_011648419.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 5.0e-41
Identity = 90/148 (60.81%), Postives = 118/148 (79.73%), Query Frame = 1 

Query: 2   KGDWKAAEKLVQEHENISLLDVISKDRKETALHIATRFNNTAFVKKLMP-QLTENDLEAK 61
           +GDWKAAE++ ++ + I L +VISKDRKETALHIATRFN  AFV+KL+  +LT+ DLEAK
Sbjct: 83  RGDWKAAEEIEKKSKGI-LSEVISKDRKETALHIATRFNKAAFVEKLIKYKLTQTDLEAK 142

Query: 62  NIYGNTPLCIAAMTGAADIAKLMVDRHEELVLKRGSGNALPLLIAARYKQFHMVSYLLKA 121
           NIYGNT LCIAA +GA DIA+LM  +H +LVL RGS NA P+LIAARYK  HMVS+LLK+
Sbjct: 143 NIYGNTALCIAATSGAVDIAELMFRKHNDLVLTRGSANATPVLIAARYKHSHMVSFLLKS 202

Query: 122 MNSHIKKLNDTDKKEILFSVISSNDYGL 149
           MN  ++K+  +++ E+L S I+S+ Y +
Sbjct: 203 MNKIVQKMEISEQMELLLSAIASDHYDI 229

The following BLAST results are available for this feature:
BLAST of CSPI01G10490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ANS1B_DANRE6.8e-0633.70Ankyrin repeat and sterile alpha motif domain-containing protein 1B OS=Danio rer... [more]
BLAST of CSPI01G10490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX18_CUCSA1.3e-7598.65Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060780 PE=4 SV=1[more]
E5GC67_CUCME2.4e-4263.51Ankyrin repeat family protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0LUS0_CUCSA3.5e-4160.81Uncharacterized protein OS=Cucumis sativus GN=Csa_1G062280 PE=4 SV=1[more]
A0A0A0LUR7_CUCSA2.8e-2748.30Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059760 PE=4 SV=1[more]
A0A0A0LU19_CUCSA1.5e-2039.86Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1[more]
BLAST of CSPI01G10490 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G35830.12.2e-2337.67 Ankyrin repeat family protein[more]
AT3G54070.12.2e-1532.89 Ankyrin repeat family protein[more]
AT5G04690.11.9e-0630.77 Ankyrin repeat family protein[more]
BLAST of CSPI01G10490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778664854|ref|XP_011648417.1|1.8e-7598.65PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus][more]
gi|700209405|gb|KGN64501.1|1.8e-7598.65hypothetical protein Csa_1G060780 [Cucumis sativus][more]
gi|307136229|gb|ADN34066.1|3.4e-4263.51ankyrin repeat family protein [Cucumis melo subsp. melo][more]
gi|659067708|ref|XP_008440886.1|3.8e-4162.16PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis melo][more]
gi|778664857|ref|XP_011648419.1|5.0e-4160.81PREDICTED: ankyrin repeat-containing protein At5g02620-like [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G10490.1CSPI01G10490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 97..127
score: 380.0coord: 63..92
score: 0.046coord: 28..59
score:
IPR020683Ankyrin repeat-containing domainGENE3DG3DSA:1.25.40.20coord: 2..132
score: 9.7
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 10..87
score: 1.
IPR020683Ankyrin repeat-containing domainPROFILEPS50297ANK_REP_REGIONcoord: 1..119
score: 15
IPR020683Ankyrin repeat-containing domainunknownSSF48403Ankyrin repeatcoord: 4..124
score: 2.19
NoneNo IPR availablePANTHERPTHR24128FAMILY NOT NAMEDcoord: 1..152
score: 5.0
NoneNo IPR availablePANTHERPTHR24128:SF16ANKYRIN REPEAT-CONTAINING PROTEINcoord: 1..152
score: 5.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G10490Lsi02G005780Bottle gourd (USVL1VR-Ls)cpilsiB030
CSPI01G10490MELO3C002441.2Melon (DHL92) v3.6.1cpimedB023
CSPI01G10490CsaV3_1G010570Cucumber (Chinese Long) v3cpicucB001
CSPI01G10490CsaV3_1G010260Cucumber (Chinese Long) v3cpicucB017
CSPI01G10490CsaV3_1G010510Cucumber (Chinese Long) v3cpicucB010
CSPI01G10490Cla97C03G055710Watermelon (97103) v2cpiwmbB041
CSPI01G10490CmaCh13G007520Cucurbita maxima (Rimu)cmacpiB219
CSPI01G10490CmoCh18G002600Cucurbita moschata (Rifu)cmocpiB383
CSPI01G10490Cp4.1LG20g03570Cucurbita pepo (Zucchini)cpecpiB506
CSPI01G10490CsGy1G010430Cucumber (Gy14) v2cgybcpiB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G10490Watermelon (97103) v2cpiwmbB001
CSPI01G10490Watermelon (97103) v2cpiwmbB032
CSPI01G10490Wax gourdcpiwgoB033
CSPI01G10490Wax gourdcpiwgoB047
CSPI01G10490Wild cucumber (PI 183967)cpicpiB038
CSPI01G10490Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G10490Cucumber (Gy14) v1cgycpiB016
CSPI01G10490Cucumber (Gy14) v1cgycpiB090
CSPI01G10490Cucurbita maxima (Rimu)cmacpiB401
CSPI01G10490Cucurbita maxima (Rimu)cmacpiB656
CSPI01G10490Cucurbita maxima (Rimu)cmacpiB865
CSPI01G10490Cucurbita moschata (Rifu)cmocpiB205
CSPI01G10490Cucurbita moschata (Rifu)cmocpiB648
CSPI01G10490Cucurbita moschata (Rifu)cmocpiB845
CSPI01G10490Cucumber (Chinese Long) v2cpicuB000
CSPI01G10490Cucumber (Chinese Long) v2cpicuB044
CSPI01G10490Melon (DHL92) v3.5.1cpimeB024
CSPI01G10490Melon (DHL92) v3.5.1cpimeB036
CSPI01G10490Melon (DHL92) v3.5.1cpimeB086
CSPI01G10490Watermelon (Charleston Gray)cpiwcgB016
CSPI01G10490Watermelon (Charleston Gray)cpiwcgB038
CSPI01G10490Watermelon (97103) v1cpiwmB010
CSPI01G10490Watermelon (97103) v1cpiwmB043
CSPI01G10490Cucurbita pepo (Zucchini)cpecpiB050
CSPI01G10490Cucurbita pepo (Zucchini)cpecpiB474
CSPI01G10490Bottle gourd (USVL1VR-Ls)cpilsiB018
CSPI01G10490Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G10490Melon (DHL92) v3.6.1cpimedB020
CSPI01G10490Melon (DHL92) v3.6.1cpimedB076
CSPI01G10490Cucumber (Gy14) v2cgybcpiB247
CSPI01G10490Silver-seed gourdcarcpiB0531
CSPI01G10490Silver-seed gourdcarcpiB0670
CSPI01G10490Silver-seed gourdcarcpiB0968
CSPI01G10490Silver-seed gourdcarcpiB1044
CSPI01G10490Cucumber (Chinese Long) v3cpicucB009
CSPI01G10490Cucumber (Chinese Long) v3cpicucB051