CSPI01G10450 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTA ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTA ATGAAGATGAAAGAAAACAACGATGATCATGATGGCCTAACACATCGTCAACTCTTCACAAAAGAGCACGAAAATCTACGGAAAGACGAGGAACAATGGATTAAAAACATGGCAAGCTCGTGCATGCTGGTGGCAACTCTAGTCGTGACAATGGTTTTCGCAGCGTTATATACGCTTCCAGGAGGCAACAATGACAAGGATGGGATTCCTATTTTCGAAAAGGATAAGAAATTTGCAGTGTTCATAATAGCAGATTTTGCCGCTCTGGTGATGTCAACAACTTCTATACTCACCTTTTTGTCAATTTTGATATTGCGCTATGCGGAAGAAGATTTTTTTGGTGTTGTTGCCGATCAAGTTATTGTTCGGATTGGTGACATTGCTTCTTGTTATAACATGCATGGTGGTGGCTTTCTGTGCAACCTTCTTTCTTTCGTA
BLAST of CSPI01G10450 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.1e-26 Identity = 62/115 (53.91%), Postives = 86/115 (74.78%), Query Frame = 1
BLAST of CSPI01G10450 vs. TrEMBL
Match: A0A061GEC6_THECC (Ankyrin repeat-containing protein, putative isoform 2 OS=Theobroma cacao GN=TCM_029348 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.6e-25 Identity = 62/119 (52.10%), Postives = 87/119 (73.11%), Query Frame = 1
BLAST of CSPI01G10450 vs. TrEMBL
Match: A0A061GD57_THECC (Ankyrin repeat-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_029348 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 5.6e-25 Identity = 62/119 (52.10%), Postives = 87/119 (73.11%), Query Frame = 1
BLAST of CSPI01G10450 vs. TrEMBL
Match: A0A068USS8_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00033429001 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.3e-24 Identity = 62/114 (54.39%), Postives = 82/114 (71.93%), Query Frame = 1
BLAST of CSPI01G10450 vs. TrEMBL
Match: A0A0A0LRT6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058080 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.6e-24 Identity = 61/112 (54.46%), Postives = 86/112 (76.79%), Query Frame = 1
BLAST of CSPI01G10450 vs. TAIR10
Match: AT5G35810.1 (AT5G35810.1 Ankyrin repeat family protein) HSP 1 Score: 105.1 bits (261), Expect = 3.6e-23 Identity = 60/116 (51.72%), Postives = 77/116 (66.38%), Query Frame = 1
BLAST of CSPI01G10450 vs. TAIR10
Match: AT5G04700.1 (AT5G04700.1 Ankyrin repeat family protein) HSP 1 Score: 98.6 bits (244), Expect = 3.4e-21 Identity = 47/106 (44.34%), Postives = 74/106 (69.81%), Query Frame = 1
BLAST of CSPI01G10450 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein) HSP 1 Score: 97.4 bits (241), Expect = 7.5e-21 Identity = 55/114 (48.25%), Postives = 72/114 (63.16%), Query Frame = 1
BLAST of CSPI01G10450 vs. TAIR10
Match: AT5G04690.1 (AT5G04690.1 Ankyrin repeat family protein) HSP 1 Score: 94.4 bits (233), Expect = 6.4e-20 Identity = 48/112 (42.86%), Postives = 74/112 (66.07%), Query Frame = 1
BLAST of CSPI01G10450 vs. TAIR10
Match: AT5G04730.1 (AT5G04730.1 Ankyrin-repeat containing protein) HSP 1 Score: 89.0 bits (219), Expect = 2.7e-18 Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 1
BLAST of CSPI01G10450 vs. NCBI nr
Match: gi|778658357|ref|XP_011652574.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 8.3e-38 Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of CSPI01G10450 vs. NCBI nr
Match: gi|778658370|ref|XP_011652589.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X3 [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 8.3e-38 Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of CSPI01G10450 vs. NCBI nr
Match: gi|778658367|ref|XP_011652584.1| (PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X2 [Cucumis sativus]) HSP 1 Score: 165.2 bits (417), Expect = 8.3e-38 Identity = 86/112 (76.79%), Postives = 94/112 (83.93%), Query Frame = 1
BLAST of CSPI01G10450 vs. NCBI nr
Match: gi|659067691|ref|XP_008440794.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis melo]) HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33 Identity = 75/121 (61.98%), Postives = 99/121 (81.82%), Query Frame = 1
BLAST of CSPI01G10450 vs. NCBI nr
Match: gi|778658352|ref|XP_011652562.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like [Cucumis sativus]) HSP 1 Score: 151.4 bits (381), Expect = 1.2e-33 Identity = 77/112 (68.75%), Postives = 95/112 (84.82%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |