CSPI01G10260 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATCGTAAAGCTATTCCTTTTTCTAGTTTTGGCAATCATATTCTCTCATTATGCATCACATGCAGCTGAAGTTGAAACAAACAGCAAAGAGAATGCTACTAATTTTTCGGATGATGAAGTTTCCAACCATCTTGCTTCGATTGAAGACGAAGATTCTCCGCTGGGTTTGGCTCGCCGTCTTCTCTTCCCCTTCCAATCTTTGCAGAAGGGATTATTGACTTGCAACAAATACCCTAGAGTGTGCAGAAGGAAGGGCAGTGCAGGGCCTGATTGTTGCAAGAAAAAGTGTGTAAACGTTGAGAGAGATAGAAACAACTGTGGAAGGTGTGGAAAGAAATGCAAGTACTCGAAGATATGTTGCAAAGGGAAATGTGTGAATCCATTGTTCCAGAGGAAGCATTGTGGAGGCTGCAACATTGAATGCAGTAAAGGAAGCTTCTGCGTCTATGGAATGTGTGGTTATGCTTAA ATGAAGATCGTAAAGCTATTCCTTTTTCTAGTTTTGGCAATCATATTCTCTCATTATGCATCACATGCAGCTGAAGTTGAAACAAACAGCAAAGAGAATGCTACTAATTTTTCGGATGATGAAGTTTCCAACCATCTTGCTTCGATTGAAGACGAAGATTCTCCGCTGGGTTTGGCTCGCCGTCTTCTCTTCCCCTTCCAATCTTTGCAGAAGGGATTATTGACTTGCAACAAATACCCTAGAGTGTGCAGAAGGAAGGGCAGTGCAGGGCCTGATTGTTGCAAGAAAAAGTGTGTAAACGTTGAGAGAGATAGAAACAACTGTGGAAGGTGTGGAAAGAAATGCAAGTACTCGAAGATATGTTGCAAAGGGAAATGTGTGAATCCATTGTTCCAGAGGAAGCATTGTGGAGGCTGCAACATTGAATGCAGTAAAGGAAGCTTCTGCGTCTATGGAATGTGTGGTTATGCTTAA ATGAAGATCGTAAAGCTATTCCTTTTTCTAGTTTTGGCAATCATATTCTCTCATTATGCATCACATGCAGCTGAAGTTGAAACAAACAGCAAAGAGAATGCTACTAATTTTTCGGATGATGAAGTTTCCAACCATCTTGCTTCGATTGAAGACGAAGATTCTCCGCTGGGTTTGGCTCGCCGTCTTCTCTTCCCCTTCCAATCTTTGCAGAAGGGATTATTGACTTGCAACAAATACCCTAGAGTGTGCAGAAGGAAGGGCAGTGCAGGGCCTGATTGTTGCAAGAAAAAGTGTGTAAACGTTGAGAGAGATAGAAACAACTGTGGAAGGTGTGGAAAGAAATGCAAGTACTCGAAGATATGTTGCAAAGGGAAATGTGTGAATCCATTGTTCCAGAGGAAGCATTGTGGAGGCTGCAACATTGAATGCAGTAAAGGAAGCTTCTGCGTCTATGGAATGTGTGGTTATGCTTAA
BLAST of CSPI01G10260 vs. Swiss-Prot
Match: STGL1_ARATH (Stigma-specific STIG1-like protein 1 OS=Arabidopsis thaliana GN=At4g26880 PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.6e-21 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of CSPI01G10260 vs. Swiss-Prot
Match: STGL3_ARATH (Stigma-specific STIG1-like protein 3 OS=Arabidopsis thaliana GN=At1g50720 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.4e-19 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 1
BLAST of CSPI01G10260 vs. Swiss-Prot
Match: STGL2_ARATH (Stigma-specific STIG1-like protein 2 OS=Arabidopsis thaliana GN=At5g55110 PE=3 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CSPI01G10260 vs. Swiss-Prot
Match: GRI_ARATH (Protein GRIM REAPER OS=Arabidopsis thaliana GN=GRI PE=1 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 7.4e-16 Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 1
BLAST of CSPI01G10260 vs. Swiss-Prot
Match: STGL4_ARATH (Stigma-specific STIG1-like protein 4 OS=Arabidopsis thaliana GN=At1g50650 PE=3 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13 Identity = 34/80 (42.50%), Postives = 47/80 (58.75%), Query Frame = 1
BLAST of CSPI01G10260 vs. TrEMBL
Match: A0A0A0LWX5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058155 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 8.1e-86 Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 1
BLAST of CSPI01G10260 vs. TrEMBL
Match: A0A0A0LRD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058150 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 2.4e-45 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = 1
BLAST of CSPI01G10260 vs. TrEMBL
Match: A0A061GGS8_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030273 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.3e-38 Identity = 87/161 (54.04%), Postives = 108/161 (67.08%), Query Frame = 1
BLAST of CSPI01G10260 vs. TrEMBL
Match: A0A061GH84_THECC (Stigma-specific Stig1 family protein, putative OS=Theobroma cacao GN=TCM_030276 PE=4 SV=1) HSP 1 Score: 166.4 bits (420), Expect = 2.8e-38 Identity = 87/161 (54.04%), Postives = 111/161 (68.94%), Query Frame = 1
BLAST of CSPI01G10260 vs. TrEMBL
Match: V7BRQ3_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G147300g PE=4 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.5e-34 Identity = 61/87 (70.11%), Postives = 72/87 (82.76%), Query Frame = 1
BLAST of CSPI01G10260 vs. TAIR10
Match: AT1G11925.1 (AT1G11925.1 Stigma-specific Stig1 family protein) HSP 1 Score: 128.3 bits (321), Expect = 4.3e-30 Identity = 51/84 (60.71%), Postives = 65/84 (77.38%), Query Frame = 1
BLAST of CSPI01G10260 vs. TAIR10
Match: AT4G26880.1 (AT4G26880.1 Stigma-specific Stig1 family protein) HSP 1 Score: 103.2 bits (256), Expect = 1.5e-22 Identity = 41/86 (47.67%), Postives = 54/86 (62.79%), Query Frame = 1
BLAST of CSPI01G10260 vs. TAIR10
Match: AT1G50720.1 (AT1G50720.1 Stigma-specific Stig1 family protein) HSP 1 Score: 94.7 bits (234), Expect = 5.3e-20 Identity = 37/84 (44.05%), Postives = 55/84 (65.48%), Query Frame = 1
BLAST of CSPI01G10260 vs. TAIR10
Match: AT5G55110.1 (AT5G55110.1 Stigma-specific Stig1 family protein) HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18 Identity = 37/87 (42.53%), Postives = 50/87 (57.47%), Query Frame = 1
BLAST of CSPI01G10260 vs. TAIR10
Match: AT1G53130.1 (AT1G53130.1 Stigma-specific Stig1 family protein) HSP 1 Score: 85.1 bits (209), Expect = 4.2e-17 Identity = 52/156 (33.33%), Postives = 80/156 (51.28%), Query Frame = 1
BLAST of CSPI01G10260 vs. NCBI nr
Match: gi|449454905|ref|XP_004145194.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]) HSP 1 Score: 324.3 bits (830), Expect = 1.2e-85 Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 1
BLAST of CSPI01G10260 vs. NCBI nr
Match: gi|659067677|ref|XP_008440721.1| (PREDICTED: uncharacterized protein LOC103485051 [Cucumis melo]) HSP 1 Score: 314.3 bits (804), Expect = 1.2e-82 Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 1
BLAST of CSPI01G10260 vs. NCBI nr
Match: gi|659067675|ref|XP_008440707.1| (PREDICTED: uncharacterized protein LOC103485044 [Cucumis melo]) HSP 1 Score: 215.3 bits (547), Expect = 7.6e-53 Identity = 102/157 (64.97%), Postives = 121/157 (77.07%), Query Frame = 1
BLAST of CSPI01G10260 vs. NCBI nr
Match: gi|449454907|ref|XP_004145195.1| (PREDICTED: stigma-specific STIG1-like protein 1 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 1.6e-50 Identity = 99/158 (62.66%), Postives = 120/158 (75.95%), Query Frame = 1
BLAST of CSPI01G10260 vs. NCBI nr
Match: gi|700209384|gb|KGN64480.1| (hypothetical protein Csa_1G058150 [Cucumis sativus]) HSP 1 Score: 189.9 bits (481), Expect = 3.4e-45 Identity = 86/130 (66.15%), Postives = 105/130 (80.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |