CSPI01G09550 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGACGAATCTCCAAATAGAAATAATAATATCGGCGTTGAGTAGCCGGAAAGCCATTTTTGGCTACTGACTCTCCGGACCATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTACTGAGTGCCTTCACTTCAGCTATTGCTTGTCGCTTCTTTTTCAGTCCTAAAAAGCACCGTTCTCGGTTTGATCTGTCGAGAAATGGGGCTCTCTTGAACAACGGATCCTCACGGTGTCCTTTTGATCCTTCCAAACGCGAAGGGTCAGAAAATTTCTTATGTGTTTGCTTTCTTGTTCGTTTACATCTCTGAATTTGAATCGACCGTTAATCCCACGGGCATTAACTTTGTTAGGGTTTAGAGTCTTCAGGATTTTCTTTGTTTTTCTACTCCTAACACAGTCAGTTTGTGGTAGTTCCTCTATTTTTGTTTTTATGAACTCAGTTTTGAATTTTGTGAATTATTTGCAGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCTTGTCAGCTGAAAGATCGAAGGATCCCAATCGACAGGTGATTATCATGTTCTTATCGGATTTGTGTACTTCTTTCTATGAGATATTGTTTTGTGGACATAAAAGAGGAAAACGGTGGATTATTTTTAGACCCATCGTTCTCTGTTTCAAGTGTCTATGCTATTAGTCTTTGTATAAGGTTGGAGGGAAGATTTGTGCACCATCAAAACCCGTGTCTTCTTATTTATTTATTCATGTTGTTTAACGTTTGGATTTATGGTCGATGGTGCAGGTTGGTGCTTGCCTGGTTAGCCAAAATGGTGTAATTCTTGGTAAGTTTGCTTCAAGGTTAATATATGGCGTTGTTGGTTACTTGCTGTGTGATGTGAGACAAAGTTAACAATAAGAACTGGTGAGCAGTAATAGTTGATGTTTGTAATTATGGGCTTCAACAAAATGCTTCTCAGTGGTAATTTACATGGACTCTTTCTGTTGAGGTTCGATGTTGAAATCGCCAAACCCCATGTTGCACTAAAGGAAGATATGAATGCTTTAACTAATAACGAGATGAATTTGTAGGCAATGCACATCAGTTGAGTACTAATGCCTGATTGTACACAAATTTCTCTCTTCATTTCTATGTTTGTGTTGTAATAAGATGATCTAAAGATGATGTCTATCACTATTAAAGTAGCCTGTCATATTGAATTGATACAGTTAACAAAATCGAACCTCTGAATTCTTCTTCATTTTTTTTCATCTGTGATAGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCGAAGGTCAGTTTTTCATGGCAAACTGAGTTCTCGACTTAAGTTGCGTTTGAATTGACTTTCTAAGTGTTTGTGAACACTTTTGTAACACTTATAAGCACTTGTTAAAACACTTAAAAAATTAATCTAAACATGCACTTATTAACAAGCATCCCATTATCATAATCAAGCATCTCATTATTATAATTCTTTTCCTTCTTATGTTCAGAAATCAAAAACCAACAATCCTTTGGAGACAAAGTATCCGTAAGTTTATGAATATGTAAGCTTTTTTAGTCAATAAAGTTCTGTCTACTAGAAGTCATGAAATTTTAATTTCCTTTTAATTTTGTTTGATTGTTATATGTGCTGAATCTTCATCGTCATAGGTCATTGGCCTAAAATTATTTTACTTTCTTTCTTATGATTCATATTTCAATCCCGTTCTTCTTGTCTTTAAAATTCTTCTATAGTTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAATACAAATCATGCTTCGGCCAGTGGACAGGTATGCTGTTTGTTTTCACCTGCCCTGCATCTCTTCGAAAATTCTTTTCCTAAGAAAGCGAGGTCTCACATAGCCCGACACACATTCTATTGATATTTCAACGCTCCTAATCAGTACTTGGTCTCTTTGTAATCTTTGCAGAAGCTGTACGTGACCATGTTCCCTTGCAATGAATGTGCAAAAATAATTATTCAGGTCTGGTCATCATTTTTATTTTCATCTTTACAAGCAATTAGGCTTTGTTTGAAGATGAGAGAGGGATGGTTTTGCCAAAAAACAATGGCATATAGGAGTTTGCCTAGAAAATGCTATTTACTCCACAAACAGCAATATTTGGCCCCTGATACCGACTATTATATTTTTTTTCTTTTTAACTACTTCATAGTACTAACTAGTGGACTTTGTTGCAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACGTTGCATATTTTGCTTCTCACAAATTGCTATCGATGGCTGGTGTAAAAGTAAGTCTTTCTGCTAGCCTCCGTTGTTCTCCACTTTATATCTTATAATGTTGCTTCAAGAATTAAGCTATATCTAGATAAAGAAGTAGCAAGGAATTTATGGTTTCATTCGACCTCTTAGACCAACTTTCTGTTACCCCTTGTCGTTCTCAACTTCAAATCTTATAACATTGCATCAAGGAATTTATAATTTCATTTGTTCTCAACTTCAAATCTTATTACATTGCATCAAAGAATGTACCTATTATGGGTGAAGAAGTAGGAAGGTATCTATAATTTCATTAGACCTCTTAGACCAACCCCTATATTTACCACAACTTCAACATATGATAATCACAAAATTTCCTACTTCGGCTTGAAAGTTCCACTGAATATGTTAAAGGTCAAAGAAACACCATGTTATCCTCTTTAGATGGTGAAGTAAAATTACTTGATGTTTGCTTGTAGAGTCTTTATGTAAGCTAGAAGAGCGAATTTGTGTTCATAATGGAAGATTAGACATAGATAACTTGGAAGTTGATCATCTCCCTTGTTAAGTGACTGATTTGTCCATTCAAATTGCTAATGCAGGTGAGAAAACACCAACCCCTTTCAGATCAGATTCTGATTAAGTTCGAGGATCCTTGTACATGAAAAGTATTTCTTCAAGTTCTTCATGCGTCTAACTTCCATTCACGCATTCTTGTTCAACATTGAAACTCGACCCTTGAAACGCTTTATCAATTTGGTTCCATATATTGATCTGTACGGAATTGTAAAAATACCTCTACGTGATAGGAACAGCAAACTATATAGTAATATGTTTTTGTTTGTTTACAGTAAAACGCTAGAGAAGGGAGACAGACTTGGAATATATTTGAAAATGAATAATAACATTGTATCCAATTTAATAATATGTGGTATAGTGTTGGTGATTGTGAA ATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTACTGAGTGCCTTCACTTCAGCTATTGCTTGTCGCTTCTTTTTCAGTCCTAAAAAGCACCGTTCTCGGTTTGATCTGTCGAGAAATGGGGCTCTCTTGAACAACGGATCCTCACGGTGTCCTTTTGATCCTTCCAAACGCGAAGGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCTTGTCAGCTGAAAGATCGAAGGATCCCAATCGACAGGTTGGTGCTTGCCTGGTTAGCCAAAATGGTGTAATTCTTGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCGAAGAAATCAAAAACCAACAATCCTTTGGAGACAAAGTATCCTTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAATACAAATCATGCTTCGGCCAGTGGACAGAAGCTGTACGTGACCATGTTCCCTTGCAATGAATGTGCAAAAATAATTATTCAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACGTTGCATATTTTGCTTCTCACAAATTGCTATCGATGGCTGGTGTAAAAGTGAGAAAACACCAACCCCTTTCAGATCAGATTCTGATTAAGTTCGAGGATCCTTGTACATGA ATGAACTCCCGCGATCTTGCACTCGTCTCCACAGCCGCTGTACTGAGTGCCTTCACTTCAGCTATTGCTTGTCGCTTCTTTTTCAGTCCTAAAAAGCACCGTTCTCGGTTTGATCTGTCGAGAAATGGGGCTCTCTTGAACAACGGATCCTCACGGTGTCCTTTTGATCCTTCCAAACGCGAAGGGTTTTTGTCTTGGGATGACTATTTCATGGCCATTGCATTCTTGTCAGCTGAAAGATCGAAGGATCCCAATCGACAGGTTGGTGCTTGCCTGGTTAGCCAAAATGGTGTAATTCTTGGCATAGGATATAATGGGTTTCCAAGAGGATGCTCTGATGACCAGCTTCCTTGGGCGAAGAAATCAAAAACCAACAATCCTTTGGAGACAAAGTATCCTTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAATACAAATCATGCTTCGGCCAGTGGACAGAAGCTGTACGTGACCATGTTCCCTTGCAATGAATGTGCAAAAATAATTATTCAGTCTGGCGTCTCTGAAGTTATTTATTTTGTTGAGAAGAGGATAAACAATTCAAACGTTGCATATTTTGCTTCTCACAAATTGCTATCGATGGCTGGTGTAAAAGTGAGAAAACACCAACCCCTTTCAGATCAGATTCTGATTAAGTTCGAGGATCCTTGTACATGA
BLAST of CSPI01G09550 vs. Swiss-Prot
Match: DCTD_PONAB (Deoxycytidylate deaminase OS=Pongo abelii GN=DCTD PE=2 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 8.7e-50 Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 1
BLAST of CSPI01G09550 vs. Swiss-Prot
Match: DCTD_HUMAN (Deoxycytidylate deaminase OS=Homo sapiens GN=DCTD PE=1 SV=2) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-48 Identity = 89/164 (54.27%), Postives = 117/164 (71.34%), Query Frame = 1
BLAST of CSPI01G09550 vs. Swiss-Prot
Match: DCTD_MOUSE (Deoxycytidylate deaminase OS=Mus musculus GN=Dctd PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.8e-48 Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 1
BLAST of CSPI01G09550 vs. Swiss-Prot
Match: DCTD_RAT (Deoxycytidylate deaminase OS=Rattus norvegicus GN=Dctd PE=2 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 4.8e-48 Identity = 88/164 (53.66%), Postives = 117/164 (71.34%), Query Frame = 1
BLAST of CSPI01G09550 vs. Swiss-Prot
Match: DCTD_DROME (Probable deoxycytidylate deaminase OS=Drosophila melanogaster GN=CG6951 PE=2 SV=1) HSP 1 Score: 184.1 bits (466), Expect = 1.7e-45 Identity = 89/167 (53.29%), Postives = 113/167 (67.66%), Query Frame = 1
BLAST of CSPI01G09550 vs. TrEMBL
Match: A0A0A0LWP2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050500 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 4.2e-128 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of CSPI01G09550 vs. TrEMBL
Match: M5WTI8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026913mg PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 8.3e-100 Identity = 179/225 (79.56%), Postives = 199/225 (88.44%), Query Frame = 1
BLAST of CSPI01G09550 vs. TrEMBL
Match: V4T9Z3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032657mg PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 9.2e-99 Identity = 186/228 (81.58%), Postives = 202/228 (88.60%), Query Frame = 1
BLAST of CSPI01G09550 vs. TrEMBL
Match: A0A067E0A7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027047mg PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 9.2e-99 Identity = 186/228 (81.58%), Postives = 202/228 (88.60%), Query Frame = 1
BLAST of CSPI01G09550 vs. TrEMBL
Match: B9RAF8_RICCO (Deoxycytidylate deaminase, putative OS=Ricinus communis GN=RCOM_1506180 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 9.2e-99 Identity = 182/225 (80.89%), Postives = 195/225 (86.67%), Query Frame = 1
BLAST of CSPI01G09550 vs. TAIR10
Match: AT3G48540.1 (AT3G48540.1 Cytidine/deoxycytidylate deaminase family protein) HSP 1 Score: 349.7 bits (896), Expect = 1.3e-96 Identity = 175/225 (77.78%), Postives = 193/225 (85.78%), Query Frame = 1
BLAST of CSPI01G09550 vs. NCBI nr
Match: gi|449454826|ref|XP_004145155.1| (PREDICTED: deoxycytidylate deaminase [Cucumis sativus]) HSP 1 Score: 465.3 bits (1196), Expect = 6.1e-128 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 1
BLAST of CSPI01G09550 vs. NCBI nr
Match: gi|659067495|ref|XP_008439719.1| (PREDICTED: deoxycytidylate deaminase [Cucumis melo]) HSP 1 Score: 453.0 bits (1164), Expect = 3.1e-124 Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 1
BLAST of CSPI01G09550 vs. NCBI nr
Match: gi|694357961|ref|XP_009359432.1| (PREDICTED: deoxycytidylate deaminase-like [Pyrus x bretschneideri]) HSP 1 Score: 380.6 bits (976), Expect = 2.0e-102 Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 1
BLAST of CSPI01G09550 vs. NCBI nr
Match: gi|658000659|ref|XP_008392785.1| (PREDICTED: deoxycytidylate deaminase [Malus domestica]) HSP 1 Score: 379.0 bits (972), Expect = 5.7e-102 Identity = 182/225 (80.89%), Postives = 202/225 (89.78%), Query Frame = 1
BLAST of CSPI01G09550 vs. NCBI nr
Match: gi|645268324|ref|XP_008239476.1| (PREDICTED: deoxycytidylate deaminase [Prunus mume]) HSP 1 Score: 371.7 bits (953), Expect = 9.1e-100 Identity = 179/225 (79.56%), Postives = 199/225 (88.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |