CSPI01G09500 (gene) Wild cucumber (PI 183967)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAAGAGAACGACGCATACATACTCGAGCGAGGATGCTGCACCAGATGGACCAGATTCTGATCTCTTTGTTTACTACTGTAAGCATTGTGGATCGCATGTCTTAATCACTGGTACTCCTTCGTCTTCACTCTACACTCTCTTTATTTCAACCTAACAACTTTGTTGACAATCAAATTGACAGAGATGATGTGGGAGATATTTGTGTATATGAACTCCATACAATTCGATGAAAATGTTATTTCCATTTGAAGAATGGATGTAACATACATAGACTAGGTTATTGTTCTGGTTTATTATAAAAGTTGAGCTGGAAATGAAGAAATTTAGGTGCACTTTGTATTTGAAGAAGGCATTGTAGAAGCACAGAATTCATTCCTATTATTCCAAGAAATAAGCATTTTGGCGTGGTATTTAACCGTACTGAATATATGTCCTATAAGATACGCAATTGCAGAAGATGCCAAAAAGGAAGACTGACAAAGCTTTTGTGTTGGACAAGAAGAAACATCTTGCAAGGTTAAATATCAACGAGGCAGGGAAAATTCTATTGAAAAGGTAACTTTGATCTCCCCCAAAGTATTGTATGTGCATTTGGGTATTTAAATTTTGTCTCAGGATATGATTAAATTTGCACTGGAGATGGTTGAGGATCAAAGTTCGAGTTATGTACACGATTTTACTTTTGAATTGATAGAATGCCTGTTCTTTAGATAGTCTAAGACTGATATTTATGAGATGATATAACAAAATGAAATTTCTGACTATATTAACAAATTGAGTTATCGTAAGGTTATGTGAAACTTGATCAGAAGAAATTTTTTTTATTCTATATGAAGGATGCATGCATGATTGAAATCTAGAGTAGGCTCTCTGTTTTACTGGTTAAACTAAGCTTGAGTTTAGTAATTTAGATGCATTATCTGTGTGGAAAGATAATGTGATGAAGTTGCCTAATTTGAGTACAGTACCCTAAACAAGAAGAATAAGCATGAGATTGATAATTTGAAAAAAGGAGAGTTTCACGTATGCATCTCCTAGATGTGAGTTTTTTTTGTTTGTTTATTTTTCTCTTGTGTGTGTGTTTAAATAAAATAAAATGAATATTTATGGTTTACATCAAGTTATTTTGGATAAATATGGAAAATTGTTGAACTAACTCAGGTGTTTCTTATGATTATTTTTCAGGGGTGAAGGGAAACTTGAAAGGCAATACCGCATGAACTGTATAGGCTGTGGACTCTTTGTGTGTTATCGCTCAGAGGAAGATTTGGAATTTGCTTCTTTCATATATGTTGTTGATGGTGCACTTAGTACAGTGGCTGCTGAAACCAACCCACAGGTAAGCTAGTCTATTATAATAATGACAACCGCTATTCATTATATTGCTCATGTTTGTTTTTTCACCGTAAGCATCTTCACAATAATTCCAATTTAAAGAATTTTTCTATAACACAAGCTGTAGAAGATGAATATTTTGTTACCATCTTAAGAATCCATTGCTAACAGTTTGTTGGTATATCGAGCTTTCGTTGACTCCTGATGAACATAACTTATAGTAGAGACACTTCTTAAAAAATTGTCTGTAATAACCTATTGTTATTTTGATAAAGTTCAGCTTCCGCTATACTGTTATAATACTCAATGACATGTGAACAATGAAAGCTTTACCAGTCCTTACCTTACTTTGGCTGGTATTTTGAGCTTTGGTTAATTCTTGGTGCACATACAATAACAATATAACTATAATATCTTTCTTTACAAAGGTGTTTCAATATCTTATTTTGATTTGTAAACAACCACACCAATTCTCACTCAAGATAACAATTATATTAGGATGCTCCTGTGCCACCCTGTATATCTCAACTTGAAGGTGGACTTGTCCAAGTGGCCATAGAAGTTGAAGATCGAGCACAGCGCTCAGCAATCACAAGTATAAAAGATATAATTGCTGTCATATTTATCTTTATGCCCGTAATCTCTGATGATTAACTTTGTTATTATGTTATCATAACAAAGAACAAGAGAGGTTGAATTCTGGTCCTTGAGATAAAGTATAATTTTAAAAGTGAAACTATTTTAAAGCAAAACAATATCGTAGGGTTTTGAATCGATTGTTTTGAAGGCTAACTCATTAGCATACTTTCACCGATTGAAGAAAAATAAAACAAATTGTTATTTTGACTGGGGTGGTTTCTTTATACGTAGCTTTATTCATAATTTTAACATTGCAACACACTTCCTGTTGCATCGTCCATTATATGTAGAACAATCTCATGAAGAACAAGTCCTAAAAGAGCTGGGGGACTTTAGAAAGTACAAGATAAAAATTTTTAGGTGAAGTCTAGGAATAGTCAGTTTATGCTGAGAGGAACTTGTGTGTGCATCAGTTGACTGTGTTCACACAATATTATTTTCTTGATTCTAGACTCTCTCATACAAACTCACACACACCCAAAGGAATGACATGCTATCTCTTTGCAGGAGTAAATGCCGATGATGTACGTGTCGCTGTTGCTGCGCCTGCAGCACGTGGAGAAGCCAACAACGAGCTTTTGGAGTTCATGGGAAAAGTACATTCTAATTCTTGTTTAGTTATGGATATATATGTTTTAGGTTCTGGATCATCAAAACCTGCATGATTTCTAAAAGGTATTTTGTCGAAATCAGGTATTGGGACTGAGGCTTAGCCAAATGACTCTCCAACGGGGATGGAATAACAAATCAAAGCTTCTTGTGGTGAGTTGATCACATCACACCTCGCAATGCTTCATAACATTATCAGAAGATTCAAAATTGATTGTTTTTCTGTGCATGTTTTTATGTTGATGTGTTGTAAGTATAACATTCAGTTTATTATTTCAGGTTGAGGATTTGTCTGCGAGACAGGTGTATGAAAAGCTTCTCGAGGCTGTGCAACCTTGA ATGCCGAAGAGAACGACGCATACATACTCGAGCGAGGATGCTGCACCAGATGGACCAGATTCTGATCTCTTTGTTTACTACTGTAAGCATTGTGGATCGCATGTCTTAATCACTGATACGCAATTGCAGAAGATGCCAAAAAGGAAGACTGACAAAGCTTTTGTGTTGGACAAGAAGAAACATCTTGCAAGGTTAAATATCAACGAGGCAGGGAAAATTCTATTGAAAAGGGGTGAAGGGAAACTTGAAAGGCAATACCGCATGAACTGTATAGGCTGTGGACTCTTTGTGTGTTATCGCTCAGAGGAAGATTTGGAATTTGCTTCTTTCATATATGTTGTTGATGGTGCACTTAGTACAGTGGCTGCTGAAACCAACCCACAGGATGCTCCTGTGCCACCCTGTATATCTCAACTTGAAGGTGGACTTGTCCAAGTGGCCATAGAAGTTGAAGATCGAGCACAGCGCTCAGCAATCACAAGAGTAAATGCCGATGATGTACGTGTCGCTGTTGCTGCGCCTGCAGCACGTGGAGAAGCCAACAACGAGCTTTTGGAGTTCATGGGAAAAGTATTGGGACTGAGGCTTAGCCAAATGACTCTCCAACGGGGATGGAATAACAAATCAAAGCTTCTTGTGGTTGAGGATTTGTCTGCGAGACAGGTGTATGAAAAGCTTCTCGAGGCTGTGCAACCTTGA ATGCCGAAGAGAACGACGCATACATACTCGAGCGAGGATGCTGCACCAGATGGACCAGATTCTGATCTCTTTGTTTACTACTGTAAGCATTGTGGATCGCATGTCTTAATCACTGATACGCAATTGCAGAAGATGCCAAAAAGGAAGACTGACAAAGCTTTTGTGTTGGACAAGAAGAAACATCTTGCAAGGTTAAATATCAACGAGGCAGGGAAAATTCTATTGAAAAGGGGTGAAGGGAAACTTGAAAGGCAATACCGCATGAACTGTATAGGCTGTGGACTCTTTGTGTGTTATCGCTCAGAGGAAGATTTGGAATTTGCTTCTTTCATATATGTTGTTGATGGTGCACTTAGTACAGTGGCTGCTGAAACCAACCCACAGGATGCTCCTGTGCCACCCTGTATATCTCAACTTGAAGGTGGACTTGTCCAAGTGGCCATAGAAGTTGAAGATCGAGCACAGCGCTCAGCAATCACAAGAGTAAATGCCGATGATGTACGTGTCGCTGTTGCTGCGCCTGCAGCACGTGGAGAAGCCAACAACGAGCTTTTGGAGTTCATGGGAAAAGTATTGGGACTGAGGCTTAGCCAAATGACTCTCCAACGGGGATGGAATAACAAATCAAAGCTTCTTGTGGTTGAGGATTTGTCTGCGAGACAGGTGTATGAAAAGCTTCTCGAGGCTGTGCAACCTTGA
BLAST of CSPI01G09500 vs. Swiss-Prot
Match: Y6344_ARATH (UPF0235 protein At5g63440 OS=Arabidopsis thaliana GN=At5g63440 PE=1 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-118 Identity = 211/232 (90.95%), Postives = 224/232 (96.55%), Query Frame = 1
BLAST of CSPI01G09500 vs. Swiss-Prot
Match: CX056_DANRE (UPF0428 protein CXorf56 homolog OS=Danio rerio GN=zgc:103697 PE=2 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 7.9e-14 Identity = 48/123 (39.02%), Postives = 66/123 (53.66%), Query Frame = 1
BLAST of CSPI01G09500 vs. Swiss-Prot
Match: CX056_BOVIN (UPF0428 protein CXorf56 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12 Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = 1
BLAST of CSPI01G09500 vs. Swiss-Prot
Match: CX056_HUMAN (UPF0428 protein CXorf56 OS=Homo sapiens GN=CXorf56 PE=1 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.6e-12 Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 1
BLAST of CSPI01G09500 vs. Swiss-Prot
Match: CX056_MOUSE (UPF0428 protein CXorf56 homolog OS=Mus musculus PE=1 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 9.6e-12 Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1
BLAST of CSPI01G09500 vs. TrEMBL
Match: A0A0A0LWN4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050450 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 6.3e-127 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of CSPI01G09500 vs. TrEMBL
Match: A0A061G5Y7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014622 PE=3 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 7.2e-123 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. TrEMBL
Match: A0A0D2NZS8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G121200 PE=3 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 7.2e-123 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. TrEMBL
Match: A0A0B0P5J1_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_24222 PE=3 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 7.2e-123 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. TrEMBL
Match: B9RAH4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1506540 PE=3 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-122 Identity = 220/232 (94.83%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. TAIR10
Match: AT5G63440.2 (AT5G63440.2 Protein of unknown function (DUF167)) HSP 1 Score: 426.8 bits (1096), Expect = 8.7e-120 Identity = 211/232 (90.95%), Postives = 224/232 (96.55%), Query Frame = 1
BLAST of CSPI01G09500 vs. TAIR10
Match: AT1G49170.1 (AT1G49170.1 Protein of unknown function (DUF167)) HSP 1 Score: 69.3 bits (168), Expect = 3.5e-12 Identity = 37/114 (32.46%), Postives = 67/114 (58.77%), Query Frame = 1
BLAST of CSPI01G09500 vs. NCBI nr
Match: gi|449469637|ref|XP_004152525.1| (PREDICTED: UPF0235 protein At5g63440 isoform X1 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 9.0e-127 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
BLAST of CSPI01G09500 vs. NCBI nr
Match: gi|823142690|ref|XP_012471146.1| (PREDICTED: UPF0235 protein At5g63440 isoform X1 [Gossypium raimondii]) HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-122 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. NCBI nr
Match: gi|590670091|ref|XP_007037958.1| (Uncharacterized protein TCM_014622 [Theobroma cacao]) HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-122 Identity = 223/232 (96.12%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. NCBI nr
Match: gi|255540269|ref|XP_002511199.1| (PREDICTED: UPF0235 protein At5g63440 [Ricinus communis]) HSP 1 Score: 446.8 bits (1148), Expect = 2.3e-122 Identity = 220/232 (94.83%), Postives = 229/232 (98.71%), Query Frame = 1
BLAST of CSPI01G09500 vs. NCBI nr
Match: gi|976921500|gb|KVI06186.1| (Protein of unknown function DUF167 [Cynara cardunculus var. scolymus]) HSP 1 Score: 446.0 bits (1146), Expect = 3.9e-122 Identity = 223/232 (96.12%), Postives = 228/232 (98.28%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |