CSPI01G09040 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G09040
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 5665752 .. 5666555 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCATACCTTCGACAACTCCCCCGATCATGCTCCATCGAAAAGAAAGATTTTGTTACCACTATTGACAACCGATCCAGAGAGCTGAAGTTTCTCATAACCGAAATGGGACCCTACAAATCATACTCCATTTCTGTCCCACCAGAATCTTTCGACTGGCTAAAGTCCACCTTCAATACGCTAATCGAAACACCTAGAACGACAAGATTCTTCCTTGAAAAAAGATTTGATGATAACTGTTTGTGGGTCCAAAAGACTCGTAACCGTAAAGGTTATCTGGCTGAAATCTTCAGAGTGGATGATAGAGGCAGAAAATCCTGCATTCTAGTTCCTGAAGGAACGGATAAGCAAGGCTAGGCCCAGTTCACTGACATGCTAACGTTAAAGAAAGAGCCTACTCAAAAAAGGAAGGCGACAACAACCACAGACGACAAAGGAAAAAAGGCCTTCTCCTACAGCTCGTCATCTGAGACAGACAGTCCACGCCGTTCATATGCTGAAGTGCTGACAAATGACAGCTCCTCCGACTCTGGTTCTCCTAGAACACTCCCCTCCGATTTCAAAGGAATAAAGAAGGAAGAAACATCCACTGGGGATTTTGATTCTCTTGATTGGAATAAGACAGTAGTGATCACAAGAAGATACTTTCATGATGACTGGAAGAAAATCATGTCGAAACTCCAAGAACAGCTGGATCTTAGCATCATCTATAAACCCTTCCATACTGAAAAGGCTGTGGTAACAATCGAAGATAAAAATTTAGTGAACCTCTTCTGCAAGAATAGAGGATGGACTGTTGGATAG

mRNA sequence

ATGGCATACCTTCGACAACTCCCCCGATCATGCTCCATCGAAAAGAAAGATTTTGTTACCACTATTGACAACCGATCCAGAGAGCTGAAGTTTCTCATAACCGAAATGGGACCCTACAAATCATACTCCATTTCTGTCCCACCAGAATCTTTCGACTGGCTAAAGTCCACCTTCAATACGCTAATCGAAACACCTAGAACGACAAGATTCTTCCTTGAAAAAAGATTTGATGATAACTGTTTGTGGGTCCAAAAGACTCGTAACCGTAAAGGTTATCTGGCTGAAATCTTCAGAGTGGATGATAGAGGCAGAAAATCCTGCATTCTAAAAGAGCCTACTCAAAAAAGGAAGGCGACAACAACCACAGACGACAAAGGAAAAAAGGCCTTCTCCTACAGCTCGTCATCTGAGACAGACAGTCCACGCCGTTCATATGCTGAAGTGCTGACAAATGACAGCTCCTCCGACTCTGGTTCTCCTAGAACACTCCCCTCCGATTTCAAAGGAATAAAGAAGGAAGAAACATCCACTGGGGATTTTGATTCTCTTGATTGGAATAAGACAGTAGTGATCACAAGAAGATACTTTCATGATGACTGGAAGAAAATCATGTCGAAACTCCAAGAACAGCTGGATCTTAGCATCATCTATAAACCCTTCCATACTGAAAAGGCTGTGGTAACAATCGAAGATAAAAATTTAGTGAACCTCTTCTGCAAGAATAGAGGATGGACTGTTGGATAG

Coding sequence (CDS)

ATGGCATACCTTCGACAACTCCCCCGATCATGCTCCATCGAAAAGAAAGATTTTGTTACCACTATTGACAACCGATCCAGAGAGCTGAAGTTTCTCATAACCGAAATGGGACCCTACAAATCATACTCCATTTCTGTCCCACCAGAATCTTTCGACTGGCTAAAGTCCACCTTCAATACGCTAATCGAAACACCTAGAACGACAAGATTCTTCCTTGAAAAAAGATTTGATGATAACTGTTTGTGGGTCCAAAAGACTCGTAACCGTAAAGGTTATCTGGCTGAAATCTTCAGAGTGGATGATAGAGGCAGAAAATCCTGCATTCTAAAAGAGCCTACTCAAAAAAGGAAGGCGACAACAACCACAGACGACAAAGGAAAAAAGGCCTTCTCCTACAGCTCGTCATCTGAGACAGACAGTCCACGCCGTTCATATGCTGAAGTGCTGACAAATGACAGCTCCTCCGACTCTGGTTCTCCTAGAACACTCCCCTCCGATTTCAAAGGAATAAAGAAGGAAGAAACATCCACTGGGGATTTTGATTCTCTTGATTGGAATAAGACAGTAGTGATCACAAGAAGATACTTTCATGATGACTGGAAGAAAATCATGTCGAAACTCCAAGAACAGCTGGATCTTAGCATCATCTATAAACCCTTCCATACTGAAAAGGCTGTGGTAACAATCGAAGATAAAAATTTAGTGAACCTCTTCTGCAAGAATAGAGGATGGACTGTTGGATAG
Homology
[Close]
BLAST of CSPI01G09040 vs. TrEMBL
Match: A0A0A0KNC5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 2.7e-67
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 

Query: 36  MGPYKSYSISVPPESFDWLKSTFNTLIETPRTTRFFLEKRFDDNCLWVQKTRNRKGYLAE 95
           MGPYKS+SI    ES DWLK+TFNTL++ PRTTRFFL+K F D CLWVQKT NRKGYLAE
Sbjct: 1   MGPYKSFSIIATLESLDWLKTTFNTLLKMPRTTRFFLKKGFGDYCLWVQKTHNRKGYLAE 60

Query: 96  IFRVDDRGRKSCIL--------------------KEPTQKRKATTTTDDKGKKAFSYSSS 155
            FRVDD+GRK CIL                    KE  QKR   T    +G KA+SYSSS
Sbjct: 61  FFRVDDKGRKCCILVIEGRDKQGWAQFTEVLSLRKEAPQKRSPQTNPSVRGPKAYSYSSS 120

Query: 156 SETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKGIKKEETSTGDFDSLDWNKTVVITRRY 215
           ++ D+PR +Y EVLT  S S+S SP +  +D K  KKE+T+   F++ DW+KT VIT+R 
Sbjct: 121 TDFDNPRHTYVEVLTKGSLSNSDSPNSYNADTKEKKKEDTTARKFETFDWSKTEVITKRC 180

Query: 216 FHDDWKKIMSKLQEQLD-LSIIYKPFHTEKAVVTIEDKNLVNLFCKNRGWT 246
           FHDDWKKIM KLQEQLD L+I YK FH EKA+V +E+KN+VNL CKNRGWT
Sbjct: 181 FHDDWKKIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWT 231

[Close]
BLAST of CSPI01G09040 vs. TrEMBL
Match: A0A0A0K120_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004025 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 7.8e-51
Identity = 107/136 (78.68%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 110 KEPTQKRKATTTTDDKGKKAFSYSSSSETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKG 169
           KE  QKRK TTTT+D+GKKA SYSS SE DSPR+SY +VLTN SSSDSGSP+ LPS  K 
Sbjct: 6   KEAAQKRKMTTTTEDRGKKASSYSSLSELDSPRKSYTKVLTNSSSSDSGSPKILPSSNK- 65

Query: 170 IKKEETSTGDFDSLDWNKTVVITRRYFHDDWKKIMSKLQEQLDLSIIYKPFHTEKAVVTI 229
             KEET TG FDSLDW KTVVITRRYFHDDWKKIM+KLQEQLDL+I YKPFH EK  VTI
Sbjct: 66  --KEETPTGAFDSLDWTKTVVITRRYFHDDWKKIMAKLQEQLDLNITYKPFHAEKVAVTI 125

Query: 230 EDKNLVNLFCKNRGWT 246
           EDKNLVNL CKNRGWT
Sbjct: 126 EDKNLVNLLCKNRGWT 138

[Close]
BLAST of CSPI01G09040 vs. TrEMBL
Match: E5GB30_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 8.1e-32
Identity = 67/91 (73.63%), Postives = 81/91 (89.01%), Query Frame = 1 

Query: 1   MAYLRQLPRSCSIEKKDFVTTIDNRSRELKFLITEMGPYKSYSISVPPESFDWLKSTFNT 60
           M+ LRQLPRSC+IEKKDFV ++DNRSR+LK LITE+GPYKS+SI+V  ES +WLKSTF T
Sbjct: 39  MSSLRQLPRSCTIEKKDFVLSLDNRSRDLKMLITEVGPYKSFSIAVTLESLEWLKSTFKT 98

Query: 61  LIETPRTTRFFLEKRFDDNCLWVQKTRNRKG 92
           L++TP TTRFFL+KRF++ CLWVQKT NRKG
Sbjct: 99  LLDTPLTTRFFLKKRFEEYCLWVQKTYNRKG 129

[Close]
BLAST of CSPI01G09040 vs. TrEMBL
Match: A0A0A0KF42_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G482730 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.5e-17
Identity = 53/97 (54.64%), Postives = 64/97 (65.98%), Query Frame = 1 

Query: 135 SSETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKGIKKEETSTGDFDSLDWNKTVVITRR 194
           SS TDSPRRSYAEV++  SSSDS S      +  G +KEE  T   +  DWNK VVITRR
Sbjct: 39  SSGTDSPRRSYAEVVSQKSSSDSDSLPLHKRESHGKRKEEAKTEKKEDFDWNKVVVITRR 98

Query: 195 YFHDDWKKIMSKLQEQLDLSIIYKPFHTEKAVVTIED 232
           Y HDD  KI+ KL+ QL+  I YK FH EKA++  +D
Sbjct: 99  YIHDDSFKIIDKLKNQLESDITYKQFHAEKAIILFKD 135

[Close]
BLAST of CSPI01G09040 vs. NCBI nr
Match: gi|700195958|gb|KGN51135.1| (hypothetical protein Csa_5G465580 [Cucumis sativus])

HSP 1 Score: 263.5 bits (672), Expect = 3.8e-67
Identity = 137/231 (59.31%), Postives = 163/231 (70.56%), Query Frame = 1 

Query: 36  MGPYKSYSISVPPESFDWLKSTFNTLIETPRTTRFFLEKRFDDNCLWVQKTRNRKGYLAE 95
           MGPYKS+SI    ES DWLK+TFNTL++ PRTTRFFL+K F D CLWVQKT NRKGYLAE
Sbjct: 1   MGPYKSFSIIATLESLDWLKTTFNTLLKMPRTTRFFLKKGFGDYCLWVQKTHNRKGYLAE 60

Query: 96  IFRVDDRGRKSCIL--------------------KEPTQKRKATTTTDDKGKKAFSYSSS 155
            FRVDD+GRK CIL                    KE  QKR   T    +G KA+SYSSS
Sbjct: 61  FFRVDDKGRKCCILVIEGRDKQGWAQFTEVLSLRKEAPQKRSPQTNPSVRGPKAYSYSSS 120

Query: 156 SETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKGIKKEETSTGDFDSLDWNKTVVITRRY 215
           ++ D+PR +Y EVLT  S S+S SP +  +D K  KKE+T+   F++ DW+KT VIT+R 
Sbjct: 121 TDFDNPRHTYVEVLTKGSLSNSDSPNSYNADTKEKKKEDTTARKFETFDWSKTEVITKRC 180

Query: 216 FHDDWKKIMSKLQEQLD-LSIIYKPFHTEKAVVTIEDKNLVNLFCKNRGWT 246
           FHDDWKKIM KLQEQLD L+I YK FH EKA+V +E+KN+VNL CKNRGWT
Sbjct: 181 FHDDWKKIMEKLQEQLDHLNITYKLFHAEKAMVFLEEKNMVNLLCKNRGWT 231

[Close]
BLAST of CSPI01G09040 vs. NCBI nr
Match: gi|700187915|gb|KGN43148.1| (hypothetical protein Csa_7G004025 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 1.1e-50
Identity = 107/136 (78.68%), Postives = 114/136 (83.82%), Query Frame = 1 

Query: 110 KEPTQKRKATTTTDDKGKKAFSYSSSSETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKG 169
           KE  QKRK TTTT+D+GKKA SYSS SE DSPR+SY +VLTN SSSDSGSP+ LPS  K 
Sbjct: 6   KEAAQKRKMTTTTEDRGKKASSYSSLSELDSPRKSYTKVLTNSSSSDSGSPKILPSSNK- 65

Query: 170 IKKEETSTGDFDSLDWNKTVVITRRYFHDDWKKIMSKLQEQLDLSIIYKPFHTEKAVVTI 229
             KEET TG FDSLDW KTVVITRRYFHDDWKKIM+KLQEQLDL+I YKPFH EK  VTI
Sbjct: 66  --KEETPTGAFDSLDWTKTVVITRRYFHDDWKKIMAKLQEQLDLNITYKPFHAEKVAVTI 125

Query: 230 EDKNLVNLFCKNRGWT 246
           EDKNLVNL CKNRGWT
Sbjct: 126 EDKNLVNLLCKNRGWT 138

[Close]
BLAST of CSPI01G09040 vs. NCBI nr
Match: gi|659071590|ref|XP_008460776.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis melo])

HSP 1 Score: 186.8 bits (473), Expect = 4.5e-44
Identity = 107/263 (40.68%), Postives = 145/263 (55.13%), Query Frame = 1 

Query: 1   MAYLRQLPRSCSIEKKDFVTTIDNRSRELKFLITEMGPYKSYSISVPPESFDWLKSTFNT 60
           MAY + LPRSC IE+K+FV  +D  S+   + +TE G +K++SI   P+  DW++ST  +
Sbjct: 1   MAYFKSLPRSCKIERKEFVLHLDKYSKHTHYWLTETGAHKAFSIEASPKDLDWIRSTLKS 60

Query: 61  LIETPRTTRFFLEKRFDDNCLWVQKTRNRKGYLAEIFRVDDRGRKSCILKEPTQKRKA-- 120
           LI TP T RFFLE R  + C+W++KTRN KG  AEIFRVD + RKSCIL     ++    
Sbjct: 61  LIATPSTNRFFLETRDSEQCIWIRKTRNNKGCTAEIFRVDQKNRKSCILVPEGPEKSGWV 120

Query: 121 ------TTTTDDKGKKAFSYSSSSETDS--------PRRSYAEVLTND-SSSDSGSPRTL 180
                 T   + K K   ++   S  DS         +RSYA  +T   SS+ S S  + 
Sbjct: 121 SFLSMITPKVEVKAKTRPAFLPRSSPDSRLSPPIDFHKRSYARAVTEGRSSATSDSSDSY 180

Query: 181 PSDFKGIKKEETSTG-DFDSLDWNKTVVITRRYFHDDWKKIMSKLQEQLDLSIIYKPFHT 240
            SD              FD L+   TVVI RR+FHDDW KI+  L++Q + S  Y  FH 
Sbjct: 181 SSDSSHSSGNSLCVSPSFDLLE--NTVVIIRRFFHDDWYKILQNLRKQTEESFTYNAFHA 240

Query: 241 EKAVVTIEDKNLVNLFCKNRGWT 246
           +KA+V        NL C+N+GWT
Sbjct: 241 DKALVHFSSSIPANLLCQNKGWT 261

[Close]
BLAST of CSPI01G09040 vs. NCBI nr
Match: gi|307135793|gb|ADN33672.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 67/91 (73.63%), Postives = 81/91 (89.01%), Query Frame = 1 

Query: 1   MAYLRQLPRSCSIEKKDFVTTIDNRSRELKFLITEMGPYKSYSISVPPESFDWLKSTFNT 60
           M+ LRQLPRSC+IEKKDFV ++DNRSR+LK LITE+GPYKS+SI+V  ES +WLKSTF T
Sbjct: 39  MSSLRQLPRSCTIEKKDFVLSLDNRSRDLKMLITEVGPYKSFSIAVTLESLEWLKSTFKT 98

Query: 61  LIETPRTTRFFLEKRFDDNCLWVQKTRNRKG 92
           L++TP TTRFFL+KRF++ CLWVQKT NRKG
Sbjct: 99  LLDTPLTTRFFLKKRFEEYCLWVQKTYNRKG 129

[Close]
BLAST of CSPI01G09040 vs. NCBI nr
Match: gi|700193131|gb|KGN48335.1| (hypothetical protein Csa_6G482730 [Cucumis sativus])

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-17
Identity = 53/97 (54.64%), Postives = 64/97 (65.98%), Query Frame = 1 

Query: 135 SSETDSPRRSYAEVLTNDSSSDSGSPRTLPSDFKGIKKEETSTGDFDSLDWNKTVVITRR 194
           SS TDSPRRSYAEV++  SSSDS S      +  G +KEE  T   +  DWNK VVITRR
Sbjct: 39  SSGTDSPRRSYAEVVSQKSSSDSDSLPLHKRESHGKRKEEAKTEKKEDFDWNKVVVITRR 98

Query: 195 YFHDDWKKIMSKLQEQLDLSIIYKPFHTEKAVVTIED 232
           Y HDD  KI+ KL+ QL+  I YK FH EKA++  +D
Sbjct: 99  YIHDDSFKIIDKLKNQLESDITYKQFHAEKAIILFKD 135

The following BLAST results are available for this feature:
BLAST of CSPI01G09040 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G09040 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNC5_CUCSA2.7e-6759.31Uncharacterized protein OS=Cucumis sativus GN=Csa_5G465580 PE=4 SV=1[more]
A0A0A0K120_CUCSA7.8e-5178.68Uncharacterized protein OS=Cucumis sativus GN=Csa_7G004025 PE=4 SV=1[more]
E5GB30_CUCME8.1e-3273.63Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KF42_CUCSA1.5e-1754.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G482730 PE=4 SV=1[more]
BLAST of CSPI01G09040 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G09040 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195958|gb|KGN51135.1|3.8e-6759.31hypothetical protein Csa_5G465580 [Cucumis sativus][more]
gi|700187915|gb|KGN43148.1|1.1e-5078.68hypothetical protein Csa_7G004025 [Cucumis sativus][more]
gi|659071590|ref|XP_008460776.1|4.5e-4440.68PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499536 [Cucumis me... [more]
gi|307135793|gb|ADN33672.1|1.2e-3173.63hypothetical protein [Cucumis melo subsp. melo][more]
gi|700193131|gb|KGN48335.1|2.1e-1754.64hypothetical protein Csa_6G482730 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G09040.1CSPI01G09040.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G09040Melon (DHL92) v3.6.1cpimedB023
CSPI01G09040Cucumber (Gy14) v2cgybcpiB001
CSPI01G09040Cucumber (Gy14) v2cgybcpiB052
CSPI01G09040Silver-seed gourdcarcpiB0531
CSPI01G09040Silver-seed gourdcarcpiB0654
CSPI01G09040Silver-seed gourdcarcpiB1041
CSPI01G09040Cucumber (Chinese Long) v3cpicucB001
CSPI01G09040Cucumber (Chinese Long) v3cpicucB022
CSPI01G09040Watermelon (97103) v2cpiwmbB032
CSPI01G09040Watermelon (97103) v2cpiwmbB072
CSPI01G09040Watermelon (97103) v2cpiwmbB088
CSPI01G09040Wax gourdcpiwgoB030
CSPI01G09040Wax gourdcpiwgoB069
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB394
CSPI01G09040Wild cucumber (PI 183967)cpicpiB008
CSPI01G09040Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G09040Cucumber (Gy14) v1cgycpiB576
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB063
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB103
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB161
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB206
CSPI01G09040Cucurbita maxima (Rimu)cmacpiB410
CSPI01G09040Cucurbita moschata (Rifu)cmocpiB056
CSPI01G09040Cucurbita moschata (Rifu)cmocpiB098
CSPI01G09040Cucurbita moschata (Rifu)cmocpiB193
CSPI01G09040Cucurbita moschata (Rifu)cmocpiB383
CSPI01G09040Cucumber (Chinese Long) v2cpicuB000
CSPI01G09040Cucumber (Chinese Long) v2cpicuB017
CSPI01G09040Melon (DHL92) v3.5.1cpimeB024
CSPI01G09040Melon (DHL92) v3.5.1cpimeB064
CSPI01G09040Watermelon (Charleston Gray)cpiwcgB038
CSPI01G09040Watermelon (Charleston Gray)cpiwcgB075
CSPI01G09040Watermelon (Charleston Gray)cpiwcgB094
CSPI01G09040Watermelon (97103) v1cpiwmB010
CSPI01G09040Cucurbita pepo (Zucchini)cpecpiB517
CSPI01G09040Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G09040Bottle gourd (USVL1VR-Ls)cpilsiB083