CSPI01G08870 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G08870
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionUnknown protein
LocationChr1 : 5548121 .. 5548540 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTAAGACATAGCAGAGAGATGGCTAAATTAGGGCAAAAAAGAGTTACAAATTCTCGGCCCAAGACTCAGCAGCAAGCACCCGATCTGACGGATTTTATGAACGATATGTTCTTTGGAGCCGTAAACAAGGACAAAAAAGCCTATAATTTGACTGGAAATGAAGATGATGATGATGATGATGATGACGATGATGAAGAAGAATGGTTTGATCGGAGTAATAGAAGTAGAAACGAGCAATTGACGGATGAGTGGCTGGATGAGGCACGTCGGTTGGTGGCTTCTTCACCTTCACGATGTAATTCCCCGGCTCGGCTTGCGCCGAGGTTTGCAGCGGCGGCCAACGGCAGATCTTCAGCGTCGATTATAGATCGGAGAGATCCACTCTCAAGGTCCGCTAGAAGGTGGGAGATTTAA

mRNA sequence

ATGGAGTTAAGACATAGCAGAGAGATGGCTAAATTAGGGCAAAAAAGAGTTACAAATTCTCGGCCCAAGACTCAGCAGCAAGCACCCGATCTGACGGATTTTATGAACGATATGTTCTTTGGAGCCGTAAACAAGGACAAAAAAGCCTATAATTTGACTGGAAATGAAGATGATGATGATGATGATGATGACGATGATGAAGAAGAATGGTTTGATCGGAGTAATAGAAGTAGAAACGAGCAATTGACGGATGAGTGGCTGGATGAGGCACGTCGGTTGGTGGCTTCTTCACCTTCACGATGTAATTCCCCGGCTCGGCTTGCGCCGAGGTTTGCAGCGGCGGCCAACGGCAGATCTTCAGCGTCGATTATAGATCGGAGAGATCCACTCTCAAGGTCCGCTAGAAGGTGGGAGATTTAA

Coding sequence (CDS)

ATGGAGTTAAGACATAGCAGAGAGATGGCTAAATTAGGGCAAAAAAGAGTTACAAATTCTCGGCCCAAGACTCAGCAGCAAGCACCCGATCTGACGGATTTTATGAACGATATGTTCTTTGGAGCCGTAAACAAGGACAAAAAAGCCTATAATTTGACTGGAAATGAAGATGATGATGATGATGATGATGACGATGATGAAGAAGAATGGTTTGATCGGAGTAATAGAAGTAGAAACGAGCAATTGACGGATGAGTGGCTGGATGAGGCACGTCGGTTGGTGGCTTCTTCACCTTCACGATGTAATTCCCCGGCTCGGCTTGCGCCGAGGTTTGCAGCGGCGGCCAACGGCAGATCTTCAGCGTCGATTATAGATCGGAGAGATCCACTCTCAAGGTCCGCTAGAAGGTGGGAGATTTAA
Homology
[Close]
BLAST of CSPI01G08870 vs. TrEMBL
Match: A0A0A0LR09_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G047425 PE=4 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.1e-65
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 1 

Query: 1   MELRHSREMAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD 60
           MELRHSREMAKLGQKRVTNSRPKTQQ+APDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD
Sbjct: 1   MELRHSREMAKLGQKRVTNSRPKTQQEAPDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD 60

Query: 61  DDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS 120
           DDDD   EEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS
Sbjct: 61  DDDD---EEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS 120

Query: 121 ASIIDRRDPLSRSARRWEI 140
           ASIIDRRDPLSRSARRWEI
Sbjct: 121 ASIIDRRDPLSRSARRWEI 136

[Close]
BLAST of CSPI01G08870 vs. TrEMBL
Match: B9IEZ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s09590g PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 8.1e-29
Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 1 

Query: 1   MELRHSREMAK-------LGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLT 60
           M+ R SRE ++       L +K V + RP   +  PDLTDFMNDMFFG V+ DK++Y+LT
Sbjct: 4   MDRRFSRESSRESKGSITLQKKIVESQRPNKTKNVPDLTDFMNDMFFGTVDNDKRSYDLT 63

Query: 61  GNEDDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRF 120
           G          +DEEE FD S RS + +LT EWL+EARR+VASSPSRC SP+RL  +PRF
Sbjct: 64  GGH-------SEDEEESFDDSTRSNSSKLTQEWLEEARRMVASSPSRCESPSRLVGSPRF 123

Query: 121 AAAANGRSSASIIDRRDPLSRSARR 137
           AA     SSASI+DRRDPLSRSARR
Sbjct: 124 AAVPARLSSASILDRRDPLSRSARR 141

[Close]
BLAST of CSPI01G08870 vs. TrEMBL
Match: B9RAT2_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1508450 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-28
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 1 

Query: 4   RHSREMAKLGQKRVTNSRPKTQQQ-APDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDDDD 63
           R S   + + QK++  SRP  + +  PDLTDFMNDMFFG VN DKKAYNLTG+       
Sbjct: 8   RESSRRSIILQKKLVESRPPNKSENVPDLTDFMNDMFFGTVNDDKKAYNLTGSH------ 67

Query: 64  DDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRFAAAANGR-S 123
            DDDEEE FD S RS   +LT EWL+EARR++ASSP+RC SP+RL  +P++A A  GR S
Sbjct: 68  LDDDEEESFDDSTRSNCSRLTQEWLEEARRMMASSPTRCESPSRLVGSPKYAGAVLGRLS 127

Query: 124 SASIIDRRDPLSRSARR 137
           ++S++DRRDPLSRSARR
Sbjct: 128 TSSVLDRRDPLSRSARR 138

[Close]
BLAST of CSPI01G08870 vs. TrEMBL
Match: A0A067K7J8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11394 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.9e-28
Identity = 85/145 (58.62%), Postives = 107/145 (73.79%), Query Frame = 1 

Query: 1   MELRHSREMAK----LGQKRVTNSRPKTQ-QQAPDLTDFMNDMFFGAVNKD-KKAYNLTG 60
           M+ R +RE  K    L +K V + +P T+ Q APDLTDFMNDMFFG VN D K+ YNLTG
Sbjct: 139 MDRRLTRESPKGSIILQKKVVESQKPMTKTQHAPDLTDFMNDMFFGTVNNDNKETYNLTG 198

Query: 61  NEDDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRFA 120
           +  D+DDD    EEE FD S RS + +LT EW++EARR+VASS  RC+SP+RL  +PRFA
Sbjct: 199 SRFDNDDD----EEESFDDSVRSNSSRLTQEWIEEARRMVASSTLRCDSPSRLVGSPRFA 258

Query: 121 AAANGRSSASIIDRRDPLSRSARRW 138
           AA  GR ++S++DRRDPLSRSARR+
Sbjct: 259 AA--GRKTSSVLDRRDPLSRSARRY 277

[Close]
BLAST of CSPI01G08870 vs. TrEMBL
Match: A5AIK7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013164 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 5.8e-27
Identity = 79/141 (56.03%), Postives = 97/141 (68.79%), Query Frame = 1 

Query: 1   MELRHSRE---MAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNED 60
           M+ R SRE      L +K   + RP  ++  PDLTDFMNDMFFG  N DKKAYN TG   
Sbjct: 1   MDRRFSRESNGFTSLQKKLAESRRPNREEPVPDLTDFMNDMFFGTXNNDKKAYNFTGGGL 60

Query: 61  DDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRFAAAA 120
            DDD+D      ++  S R+ N +LT EWL EA+++VASSPSRC SP+RL  +PRF AAA
Sbjct: 61  MDDDED------YYGDSTRNSNSRLTQEWLREAKQMVASSPSRCESPSRLVGSPRF-AAA 120

Query: 121 NGRSSASIIDRRDPLSRSARR 137
            GR SAS++DRR+PLSRSARR
Sbjct: 121 QGRESASLLDRRNPLSRSARR 134

[Close]
BLAST of CSPI01G08870 vs. NCBI nr
Match: gi|700209254|gb|KGN64350.1| (hypothetical protein Csa_1G047425 [Cucumis sativus])

HSP 1 Score: 255.8 bits (652), Expect = 4.5e-65
Identity = 135/139 (97.12%), Postives = 136/139 (97.84%), Query Frame = 1 

Query: 1   MELRHSREMAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD 60
           MELRHSREMAKLGQKRVTNSRPKTQQ+APDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD
Sbjct: 1   MELRHSREMAKLGQKRVTNSRPKTQQEAPDLTDFMNDMFFGAVNKDKKAYNLTGNEDDDD 60

Query: 61  DDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS 120
           DDDD   EEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS
Sbjct: 61  DDDD---EEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARLAPRFAAAANGRSS 120

Query: 121 ASIIDRRDPLSRSARRWEI 140
           ASIIDRRDPLSRSARRWEI
Sbjct: 121 ASIIDRRDPLSRSARRWEI 136

[Close]
BLAST of CSPI01G08870 vs. NCBI nr
Match: gi|659068765|ref|XP_008446103.1| (PREDICTED: uncharacterized protein LOC103488927 [Cucumis melo])

HSP 1 Score: 219.5 bits (558), Expect = 3.6e-54
Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 1 

Query: 1   MELRHSRE----MAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNE 60
           MELRHSRE    MAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNE
Sbjct: 1   MELRHSREKSREMAKLGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLTGNE 60

Query: 61  DDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRFAAA 120
           ++DDDDD    EEWFDRSNRSRNEQLT+EWLDEARRLVASSPSRCNSPARL  +PRF AA
Sbjct: 61  ENDDDDD----EEWFDRSNRSRNEQLTEEWLDEARRLVASSPSRCNSPARLVGSPRF-AA 120

Query: 121 ANGRSSASIIDRRDPLSRSARR 137
           ANGRS AS IDRRDPLSRSARR
Sbjct: 121 ANGRSPASNIDRRDPLSRSARR 137

[Close]
BLAST of CSPI01G08870 vs. NCBI nr
Match: gi|743905670|ref|XP_011046239.1| (PREDICTED: uncharacterized protein LOC105140892 isoform X2 [Populus euphratica])

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-29
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 1   MELRHSREMAK-------LGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLT 60
           M+ R SRE ++       L +K V + RP   +  PDLTDFMNDMFFG V+ DK++Y+LT
Sbjct: 4   MDRRFSRESSRESKGSITLQKKIVESRRPNKTKNVPDLTDFMNDMFFGTVDNDKRSYDLT 63

Query: 61  GNEDDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRF 120
           G          +DEEE FD S RS + +LT EWL+EARR+VASSPSRC SP+RL  +PRF
Sbjct: 64  GGH-------SEDEEESFDDSTRSNSSKLTQEWLEEARRMVASSPSRCESPSRLVGSPRF 123

Query: 121 AAAANGRSSASIIDRRDPLSRSARRW 138
           AA     SSASI+DRRDPLSRSARR+
Sbjct: 124 AAVPGRLSSASILDRRDPLSRSARRY 142

[Close]
BLAST of CSPI01G08870 vs. NCBI nr
Match: gi|743905668|ref|XP_011046238.1| (PREDICTED: uncharacterized protein LOC105140892 isoform X1 [Populus euphratica])

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-29
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 1   MELRHSREMAK-------LGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLT 60
           M+ R SRE ++       L +K V + RP   +  PDLTDFMNDMFFG V+ DK++Y+LT
Sbjct: 4   MDRRFSRESSRESKGSITLQKKIVESRRPNKTKNVPDLTDFMNDMFFGTVDNDKRSYDLT 63

Query: 61  GNEDDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRF 120
           G          +DEEE FD S RS + +LT EWL+EARR+VASSPSRC SP+RL  +PRF
Sbjct: 64  GGH-------SEDEEESFDDSTRSNSSKLTQEWLEEARRMVASSPSRCESPSRLVGSPRF 123

Query: 121 AAAANGRSSASIIDRRDPLSRSARRW 138
           AA     SSASI+DRRDPLSRSARR+
Sbjct: 124 AAVPGRLSSASILDRRDPLSRSARRY 142

[Close]
BLAST of CSPI01G08870 vs. NCBI nr
Match: gi|743905672|ref|XP_011046240.1| (PREDICTED: uncharacterized protein LOC105140892 isoform X3 [Populus euphratica])

HSP 1 Score: 136.3 bits (342), Expect = 4.0e-29
Identity = 82/146 (56.16%), Postives = 101/146 (69.18%), Query Frame = 1 

Query: 1   MELRHSREMAK-------LGQKRVTNSRPKTQQQAPDLTDFMNDMFFGAVNKDKKAYNLT 60
           M+ R SRE ++       L +K V + RP   +  PDLTDFMNDMFFG V+ DK++Y+LT
Sbjct: 4   MDRRFSRESSRESKGSITLQKKIVESRRPNKTKNVPDLTDFMNDMFFGTVDNDKRSYDLT 63

Query: 61  GNEDDDDDDDDDDEEEWFDRSNRSRNEQLTDEWLDEARRLVASSPSRCNSPARL--APRF 120
           G          +DEEE FD S RS + +LT EWL+EARR+VASSPSRC SP+RL  +PRF
Sbjct: 64  GGH-------SEDEEESFDDSTRSNSSKLTQEWLEEARRMVASSPSRCESPSRLVGSPRF 123

Query: 121 AAAANGRSSASIIDRRDPLSRSARRW 138
           AA     SSASI+DRRDPLSRSARR+
Sbjct: 124 AAVPGRLSSASILDRRDPLSRSARRY 142

The following BLAST results are available for this feature:
BLAST of CSPI01G08870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G08870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LR09_CUCSA3.1e-6597.12Uncharacterized protein OS=Cucumis sativus GN=Csa_1G047425 PE=4 SV=1[more]
B9IEZ3_POPTR8.1e-2956.55Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s09590g PE=4 SV=1[more]
B9RAT2_RICCO2.3e-2858.39Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1508450 PE=4 SV=1[more]
A0A067K7J8_JATCU8.9e-2858.62Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11394 PE=4 SV=1[more]
A5AIK7_VITVI5.8e-2756.03Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_013164 PE=4 SV=1[more]
BLAST of CSPI01G08870 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CSPI01G08870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700209254|gb|KGN64350.1|4.5e-6597.12hypothetical protein Csa_1G047425 [Cucumis sativus][more]
gi|659068765|ref|XP_008446103.1|3.6e-5488.03PREDICTED: uncharacterized protein LOC103488927 [Cucumis melo][more]
gi|743905670|ref|XP_011046239.1|4.0e-2956.16PREDICTED: uncharacterized protein LOC105140892 isoform X2 [Populus euphratica][more]
gi|743905668|ref|XP_011046238.1|4.0e-2956.16PREDICTED: uncharacterized protein LOC105140892 isoform X1 [Populus euphratica][more]
gi|743905672|ref|XP_011046240.1|4.0e-2956.16PREDICTED: uncharacterized protein LOC105140892 isoform X3 [Populus euphratica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G08870.1CSPI01G08870.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G08870Lsi02G004220Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G08870CsaV3_1G008900Cucumber (Chinese Long) v3cpicucB001
CSPI01G08870Bhi08G001352Wax gourdcpiwgoB030
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G08870Cucurbita maxima (Rimu)cmacpiB063
CSPI01G08870Cucurbita maxima (Rimu)cmacpiB103
CSPI01G08870Cucurbita maxima (Rimu)cmacpiB161
CSPI01G08870Cucurbita maxima (Rimu)cmacpiB410
CSPI01G08870Cucurbita moschata (Rifu)cmocpiB056
CSPI01G08870Cucurbita moschata (Rifu)cmocpiB383
CSPI01G08870Cucurbita moschata (Rifu)cmocpiB398
CSPI01G08870Cucumber (Chinese Long) v2cpicuB000
CSPI01G08870Cucumber (Chinese Long) v2cpicuB007
CSPI01G08870Cucumber (Chinese Long) v2cpicuB017
CSPI01G08870Melon (DHL92) v3.5.1cpimeB024
CSPI01G08870Melon (DHL92) v3.5.1cpimeB047
CSPI01G08870Melon (DHL92) v3.5.1cpimeB064
CSPI01G08870Watermelon (Charleston Gray)cpiwcgB038
CSPI01G08870Watermelon (Charleston Gray)cpiwcgB063
CSPI01G08870Watermelon (Charleston Gray)cpiwcgB075
CSPI01G08870Watermelon (Charleston Gray)cpiwcgB094
CSPI01G08870Watermelon (97103) v1cpiwmB010
CSPI01G08870Watermelon (97103) v1cpiwmB036
CSPI01G08870Bottle gourd (USVL1VR-Ls)cpilsiB050
CSPI01G08870Bottle gourd (USVL1VR-Ls)cpilsiB066
CSPI01G08870Bottle gourd (USVL1VR-Ls)cpilsiB083
CSPI01G08870Melon (DHL92) v3.6.1cpimedB023
CSPI01G08870Melon (DHL92) v3.6.1cpimedB041
CSPI01G08870Cucumber (Gy14) v2cgybcpiB001
CSPI01G08870Cucumber (Gy14) v2cgybcpiB052
CSPI01G08870Silver-seed gourdcarcpiB0531
CSPI01G08870Silver-seed gourdcarcpiB0654
CSPI01G08870Cucumber (Chinese Long) v3cpicucB022
CSPI01G08870Watermelon (97103) v2cpiwmbB032
CSPI01G08870Watermelon (97103) v2cpiwmbB059
CSPI01G08870Watermelon (97103) v2cpiwmbB072
CSPI01G08870Watermelon (97103) v2cpiwmbB088
CSPI01G08870Wax gourdcpiwgoB069
CSPI01G08870Cucurbita maxima (Rimu)cmacpiB394
CSPI01G08870Wild cucumber (PI 183967)cpicpiB002
CSPI01G08870Wild cucumber (PI 183967)cpicpiB008
CSPI01G08870Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G08870Cucumber (Gy14) v1cgycpiB107
CSPI01G08870Cucumber (Gy14) v1cgycpiB312