CSPI01G07390 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G07390
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionHAUS augmin-like complex subunit 1
LocationChr1 : 4666644 .. 4667121 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGTTTTGTTTCTTTTGATTGATTTTGTTTTTCGGGCTTTTAGAGGCGAGAATCAGAGAGATTTTGGAGAGCGTGGGGATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGGTAATGAAATTGAAATCCCTAAATTTCTTGATGAATTTGTGGTTGAAATTTTGGGTGAGTGTTTGTTTGATCGAGAGATTGTTAAACAATGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGGTTAGTTTTTTTGGAGAAATTTCTTTCTTACCACATTTCTGTGTGTGCTTACAATTTAGTGTTTGGTTTTTGA

mRNA sequence

ATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGGTTAGTTTTTTTGGAGAAATTTCTTTCTTACCACATTTCTGTGTGTGCTTACAATTTAGTGTTTGGTTTTTGA

Coding sequence (CDS)

ATGGCACAGGAGAATTTACCCTCCAATGTGGTTTCATCGGCGCAAGTTCTTGCTAATGTGGCAAATTTGTTGAACATTAGGGATACTGAGCTCAGTAGCTTTCTGGTTGCAATGGGGGATTTTTCTTTGAGGAAAATAAGTGTTGAGGAGAAGAGGGCAAAGGTGGAGAAGGATTCTAAGGTTCTACTTGATCATACTCGAAAGGCAATAGCTAGATTAACATATTTGAAGAGGTTAGTTTTTTTGGAGAAATTTCTTTCTTACCACATTTCTGTGTGTGCTTACAATTTAGTGTTTGGTTTTTGA
Homology
[Close]
BLAST of CSPI01G07390 vs. Swiss-Prot
Match: AUG1_ARATH (AUGMIN subunit 1 OS=Arabidopsis thaliana GN=AUG1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 6.0e-27
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           M+QE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK  VEEKRAK +K+S 
Sbjct: 98  MSQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTGVEEKRAKAQKESN 157

Query: 61  VLLDHTRKAIARLTYLKRLV 81
            LLD+TRKAI RLTYLK+++
Sbjct: 158 ALLDYTRKAIQRLTYLKKIL 177

[Close]
BLAST of CSPI01G07390 vs. TrEMBL
Match: A0A0A0LC18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824800 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.8e-31
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK
Sbjct: 98  MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 157

Query: 61  VLLDHTRKAIARLTYLKR 79
           VLLDHTRKAIARLTYLKR
Sbjct: 158 VLLDHTRKAIARLTYLKR 175

[Close]
BLAST of CSPI01G07390 vs. TrEMBL
Match: A0A0A0L0G7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G351120 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-29
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           MAQENL SNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSK
Sbjct: 98  MAQENLSSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSK 157

Query: 61  VLLDHTRKAIARLTYLKR 79
           VLLDHTRKAIARLTYLKR
Sbjct: 158 VLLDHTRKAIARLTYLKR 175

[Close]
BLAST of CSPI01G07390 vs. TrEMBL
Match: A0A067DL45_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022524mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-27
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           +AQE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK +VEEKRAKV+K+SK
Sbjct: 96  LAQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTAVEEKRAKVQKESK 155

Query: 61  VLLDHTRKAIARLTYLKR 79
           +LLD+TRKAIARLTYLKR
Sbjct: 156 ILLDYTRKAIARLTYLKR 173

[Close]
BLAST of CSPI01G07390 vs. TrEMBL
Match: A0A067DQ63_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022524mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-27
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           +AQE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK +VEEKRAKV+K+SK
Sbjct: 96  LAQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTAVEEKRAKVQKESK 155

Query: 61  VLLDHTRKAIARLTYLKR 79
           +LLD+TRKAIARLTYLKR
Sbjct: 156 ILLDYTRKAIARLTYLKR 173

[Close]
BLAST of CSPI01G07390 vs. TrEMBL
Match: V4TUA0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021431mg PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.2e-27
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           +AQE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK +VEEKRAKV+K+SK
Sbjct: 96  LAQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTAVEEKRAKVQKESK 155

Query: 61  VLLDHTRKAIARLTYLKR 79
           +LLD+TRKAIARLTYLKR
Sbjct: 156 ILLDYTRKAIARLTYLKR 173

[Close]
BLAST of CSPI01G07390 vs. TAIR10
Match: AT2G41350.2 (AT2G41350.2 unknown protein)

HSP 1 Score: 121.3 bits (303), Expect = 3.4e-28
Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           M+QE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK  VEEKRAK +K+S 
Sbjct: 98  MSQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTGVEEKRAKAQKESN 157

Query: 61  VLLDHTRKAIARLTYLKRLV 81
            LLD+TRKAI RLTYLK+++
Sbjct: 158 ALLDYTRKAIQRLTYLKKIL 177

[Close]
BLAST of CSPI01G07390 vs. NCBI nr
Match: gi|778685460|ref|XP_004136688.2| (PREDICTED: uncharacterized protein LOC101211882 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-31
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK
Sbjct: 98  MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 157

Query: 61  VLLDHTRKAIARLTYLKR 79
           VLLDHTRKAIARLTYLKR
Sbjct: 158 VLLDHTRKAIARLTYLKR 175

[Close]
BLAST of CSPI01G07390 vs. NCBI nr
Match: gi|659111318|ref|XP_008455693.1| (PREDICTED: uncharacterized protein LOC103495806 [Cucumis melo])

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-30
Identity = 77/78 (98.72%), Postives = 77/78 (98.72%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSK
Sbjct: 98  MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSK 157

Query: 61  VLLDHTRKAIARLTYLKR 79
           VLLDHTRKAIARLTYLKR
Sbjct: 158 VLLDHTRKAIARLTYLKR 175

[Close]
BLAST of CSPI01G07390 vs. NCBI nr
Match: gi|778694206|ref|XP_011653766.1| (PREDICTED: uncharacterized protein LOC101220993 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.7e-29
Identity = 76/78 (97.44%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           MAQENL SNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRKISVEEKRAKVEKDSK
Sbjct: 98  MAQENLSSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKISVEEKRAKVEKDSK 157

Query: 61  VLLDHTRKAIARLTYLKR 79
           VLLDHTRKAIARLTYLKR
Sbjct: 158 VLLDHTRKAIARLTYLKR 175

[Close]
BLAST of CSPI01G07390 vs. NCBI nr
Match: gi|567899186|ref|XP_006442081.1| (hypothetical protein CICLE_v10021431mg [Citrus clementina])

HSP 1 Score: 128.6 bits (322), Expect = 6.0e-27
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           +AQE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK +VEEKRAKV+K+SK
Sbjct: 96  LAQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTAVEEKRAKVQKESK 155

Query: 61  VLLDHTRKAIARLTYLKR 79
           +LLD+TRKAIARLTYLKR
Sbjct: 156 ILLDYTRKAIARLTYLKR 173

[Close]
BLAST of CSPI01G07390 vs. NCBI nr
Match: gi|567899184|ref|XP_006442080.1| (hypothetical protein CICLE_v10021431mg [Citrus clementina])

HSP 1 Score: 128.6 bits (322), Expect = 6.0e-27
Identity = 69/78 (88.46%), Postives = 76/78 (97.44%), Query Frame = 1 

Query: 1   MAQENLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDFSLRKISVEEKRAKVEKDSK 60
           +AQE+LPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGD SLRK +VEEKRAKV+K+SK
Sbjct: 96  LAQESLPSNVVSSAQVLANVANLLNIRDTELSSFLVAMGDISLRKTAVEEKRAKVQKESK 155

Query: 61  VLLDHTRKAIARLTYLKR 79
           +LLD+TRKAIARLTYLKR
Sbjct: 156 ILLDYTRKAIARLTYLKR 173

The following BLAST results are available for this feature:
BLAST of CSPI01G07390 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AUG1_ARATH6.0e-2781.25AUGMIN subunit 1 OS=Arabidopsis thaliana GN=AUG1 PE=1 SV=1[more]
BLAST of CSPI01G07390 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC18_CUCSA2.8e-31100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824800 PE=4 SV=1[more]
A0A0A0L0G7_CUCSA1.2e-2997.44Uncharacterized protein OS=Cucumis sativus GN=Csa_4G351120 PE=4 SV=1[more]
A0A067DL45_CITSI4.2e-2788.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022524mg PE=4 SV=1[more]
A0A067DQ63_CITSI4.2e-2788.46Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g022524mg PE=4 SV=1[more]
V4TUA0_9ROSI4.2e-2788.46Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021431mg PE=4 SV=1[more]
BLAST of CSPI01G07390 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G41350.23.4e-2881.25 unknown protein[more]
BLAST of CSPI01G07390 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778685460|ref|XP_004136688.2|4.0e-31100.00PREDICTED: uncharacterized protein LOC101211882 [Cucumis sativus][more]
gi|659111318|ref|XP_008455693.1|2.0e-3098.72PREDICTED: uncharacterized protein LOC103495806 [Cucumis melo][more]
gi|778694206|ref|XP_011653766.1|1.7e-2997.44PREDICTED: uncharacterized protein LOC101220993 [Cucumis sativus][more]
gi|567899186|ref|XP_006442081.1|6.0e-2788.46hypothetical protein CICLE_v10021431mg [Citrus clementina][more]
gi|567899184|ref|XP_006442080.1|6.0e-2788.46hypothetical protein CICLE_v10021431mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051297 centrosome organization
biological_process GO:0051225 spindle assembly
cellular_component GO:0070652 HAUS complex
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G07390.1CSPI01G07390.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31570FAMILY NOT NAMEDcoord: 1..78
score: 4.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G07390Cucumber (Chinese Long) v2cpicuB000
CSPI01G07390Melon (DHL92) v3.5.1cpimeB024
CSPI01G07390Watermelon (Charleston Gray)cpiwcgB059
CSPI01G07390Watermelon (97103) v1cpiwmB066
CSPI01G07390Cucurbita pepo (Zucchini)cpecpiB505
CSPI01G07390Bottle gourd (USVL1VR-Ls)cpilsiB021
CSPI01G07390Melon (DHL92) v3.6.1cpimedB023
CSPI01G07390Cucumber (Gy14) v2cgybcpiB001
CSPI01G07390Silver-seed gourdcarcpiB0418
CSPI01G07390Silver-seed gourdcarcpiB0531
CSPI01G07390Cucumber (Chinese Long) v3cpicucB001
CSPI01G07390Watermelon (97103) v2cpiwmbB055
CSPI01G07390Wax gourdcpiwgoB028
CSPI01G07390Wax gourdcpiwgoB062
CSPI01G07390Cucurbita maxima (Rimu)cmacpiB394
CSPI01G07390Cucurbita pepo (Zucchini)cpecpiB025
CSPI01G07390Cucumber (Gy14) v1cgycpiB160
CSPI01G07390Cucurbita maxima (Rimu)cmacpiB218
CSPI01G07390Cucurbita moschata (Rifu)cmocpiB204
CSPI01G07390Cucurbita moschata (Rifu)cmocpiB383